View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4863-Insertion-7 (Length: 372)
Name: NF4863-Insertion-7
Description: NF4863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4863-Insertion-7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 22 - 372
Target Start/End: Complemental strand, 4106772 - 4106421
Alignment:
| Q |
22 |
ctactactactttagtatcaaaatcaaagacaatgtcatccaaatgaatttctgcaaccc-atcatattgcatgttgcaatctataaacctcgccttctt |
120 |
Q |
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| T |
4106772 |
ctactactactttagcatcaaaatcaaagacaatctcatccagatgaatttctgcaaccccatcttattgcatgttgcaatctataaacctcgccttctt |
4106673 |
T |
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| Q |
121 |
tcacatataactttggagaataacataaagttttgggggtagctaagtctacctaatggttgcactatctattgcccacttacaaattatattttaaact |
220 |
Q |
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| T |
4106672 |
tcacatataactttggagaataacataaagttttgggggtagccaagtctacctaatggttgcactatctattgcccacttacaaattatattttaaact |
4106573 |
T |
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| Q |
221 |
caccatccatgtgaattatatattattcaatattcacatccttacaaaaaaccgttctagttgactttaaggannnnnnnnngctatttacccactctac |
320 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |
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| T |
4106572 |
caccatccatgtgaattatatattattcaatattcacatccttacaaaaaaccgtcctagttgactttaaggatttttttttgctatttacccactctac |
4106473 |
T |
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| Q |
321 |
tttcttataaatagctagccacataattgtcataaatggtgagttgacgcaa |
372 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4106472 |
tttcttataaatagctagccacataattgtcataaatggtgagttgacgcaa |
4106421 |
T |
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