View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4864-Insertion-3 (Length: 749)

Name: NF4864-Insertion-3
Description: NF4864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4864-Insertion-3
NF4864-Insertion-3
[»] chr6 (9 HSPs)
chr6 (8-738)||(4834352-4835073)
chr6 (240-523)||(7415506-7415789)
chr6 (250-523)||(7422524-7422797)
chr6 (250-523)||(7426463-7426736)
chr6 (240-523)||(33242717-33242998)
chr6 (415-523)||(13886583-13886691)
chr6 (240-370)||(13886455-13886585)
chr6 (526-577)||(4846397-4846448)
chr6 (490-523)||(16389217-16389250)
[»] chr7 (11 HSPs)
chr7 (240-523)||(42513062-42513345)
chr7 (240-447)||(38572287-38572494)
chr7 (373-523)||(30456307-30456456)
chr7 (373-523)||(30452702-30452847)
chr7 (401-513)||(11206499-11206611)
chr7 (350-523)||(49017104-49017277)
chr7 (344-524)||(41712265-41712443)
chr7 (399-524)||(6102928-6103054)
chr7 (373-441)||(4257433-4257501)
chr7 (473-523)||(2534511-2534562)
chr7 (486-523)||(4257365-4257402)
[»] chr5 (6 HSPs)
chr5 (240-524)||(8123395-8123679)
chr5 (240-514)||(671329-671603)
chr5 (396-524)||(41709523-41709651)
chr5 (373-523)||(24108697-24108848)
chr5 (399-523)||(10321869-10321991)
chr5 (240-320)||(41709390-41709470)
[»] chr3 (14 HSPs)
chr3 (240-523)||(36326369-36326640)
chr3 (240-462)||(30911922-30912144)
chr3 (235-474)||(55211737-55211972)
chr3 (289-454)||(32414652-32414821)
chr3 (425-523)||(14029379-14029477)
chr3 (390-519)||(33328221-33328354)
chr3 (479-523)||(1830895-1830939)
chr3 (479-523)||(19798051-19798095)
chr3 (479-523)||(19798296-19798340)
chr3 (479-523)||(30912141-30912185)
chr3 (467-509)||(32414847-32414889)
chr3 (479-523)||(18319506-18319550)
chr3 (492-523)||(30911613-30911644)
chr3 (479-524)||(16441851-16441897)
[»] chr1 (10 HSPs)
chr1 (240-523)||(18583886-18584169)
chr1 (373-523)||(23405475-23405625)
chr1 (240-367)||(13087574-13087700)
chr1 (429-523)||(21075941-21076035)
chr1 (397-516)||(9893767-9893886)
chr1 (396-521)||(13087701-13087825)
chr1 (240-371)||(21076127-21076258)
chr1 (401-528)||(6392717-6392844)
chr1 (374-422)||(24618433-24618481)
chr1 (479-524)||(44085523-44085569)
[»] chr8 (5 HSPs)
chr8 (377-523)||(44761971-44762117)
chr8 (377-523)||(44765278-44765424)
chr8 (479-523)||(32519623-32519668)
chr8 (240-320)||(44765130-44765210)
chr8 (400-460)||(14276624-14276685)
[»] chr4 (11 HSPs)
chr4 (373-523)||(27387620-27387770)
chr4 (391-523)||(55322334-55322467)
chr4 (284-413)||(20441029-20441157)
chr4 (377-523)||(36050668-36050813)
chr4 (377-523)||(36053927-36054072)
chr4 (399-523)||(24733642-24733766)
chr4 (240-320)||(36050520-36050600)
chr4 (240-320)||(36053779-36053859)
chr4 (373-521)||(12638012-12638158)
chr4 (479-528)||(10129627-10129678)
chr4 (373-461)||(45736016-45736107)
[»] chr2 (4 HSPs)
chr2 (284-415)||(31211600-31211731)
chr2 (421-523)||(31211861-31211963)
chr2 (373-507)||(45327420-45327554)
chr2 (373-439)||(40400982-40401048)


Alignment Details
Target: chr6 (Bit Score: 561; Significance: 0; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 561; E-Value: 0
Query Start/End: Original strand, 8 - 738
Target Start/End: Original strand, 4834352 - 4835073
Alignment:
Q  8 tagattgtgcgtgcaaatagcaattt-caagcaaatttaagtttggaaggtgtgataaccaaaatggacaaattttcctgagtgaagttttgatccttaa 106  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4834352 tagattgtgcgtgcaaatagcaattttcaagcaaatttaagtttggaaggtttgataaccaaaatggacaaattttcctgagtgaagttttgatccttaa 4834451  T
Q  107 tattgtggaggaatgaggatcgttatcaaatgcagccaatgtcgcctcaatcgtgactgccttgtagcttcaacaacatcgaaaaccgttataacacggc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  4834452 tattgtggaggaatgaggatcgttatcaaatgcagccaatgtcgccttaatcgtgactgccctgtagtttcaacaacatcgaaaaccgttataacacggc 4834551  T
Q  207 tgagactgcggtcacaaacctttgtttacaaccgataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactc 306  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4834552 tgagactgcggtcacaaacctttgtttacaactgatag-atatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactc 4834650  T
Q  307 accttaatctagaaggatctaaaagg--tatcttgttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatat 404  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  4834651 accttaatctagaaggatctaaaaggagtatcttattaggggataatattgagtatgttagggtgcacttatcttattatgagtatgcataagtctatat 4834750  T
Q  405 aagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatcccta 504  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4834751 aagcattgtatgcctcattattagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatcccta 4834850  T
Q  505 ctcgaattgggtcgtatcaacaacccttcaatagtttgttcatcttcatctagaatcacaaaacaattacaaccataaaaacatcaaaatcaagatgtat 604  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4834851 ctcaaattgggtcgtatcaacaacccttcaatagtttgttcatcttcatctagaatcacaaaacaattacaaccataaaaacatcaaaatcaagatgtat 4834950  T
Q  605 tatttgctaacaacaatnnnnnnnnnnnnnnnnngctcaatccatgtttctttacgaaaccacattcccaacatgttnnnnnnnttgatagtattatatt 704  Q
    |||||||||||||||||                 ||||||||||| |||||||||||||||||||| ||||||||||       |||||| |||||||||    
T  4834951 tatttgctaacaacaat---------aaaaaaaagctcaatccatatttctttacgaaaccacatt-ccaacatgtt-aaaaatttgataatattatatt 4835039  T
Q  705 agtagtagatgtagttgttattatttacttacta 738  Q
    ||||||||||||||||||||||||||| ||||||    
T  4835040 agtagtagatgtagttgttattatttatttacta 4835073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 240 - 523
Target Start/End: Original strand, 7415506 - 7415789
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    |||||| || |||||||||||| ||| |||||||||||||||  ||||||||||  |||||||||||| |||||| |||||||||||| ||  |||||||    
T  7415506 gatagggtacttagaataatgagtactaatgtggtgactcagctagttctagaaaatattatgactcatcttaatttagaaggatctagaaattatcttg 7415605  T
Q  340 ttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaa 439  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||   || ||||||||||||||||||||||||| ||||| |||||||||||||    
T  7415606 ttaggggataatattgagtatgttatggtgcacttatcttattatgagtacacataagtctatataagcattgtatgccttattatgagaatcaatgaaa 7415705  T
Q  440 aagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    || ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| | |||| ||||||||    
T  7415706 aatataatgaattttctttctcttttctctagtttctctctctaatttctggagtgtgatccctactcaagttggatcgtatca 7415789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 250 - 523
Target Start/End: Original strand, 7422524 - 7422797
Alignment:
Q  250 ttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttgttaggggata 349  Q
    |||||||||||| ||| |||||||||||| ||  ||||||||||  |||||||| ||| |||||| |||||||||||| ||| |||||||||||||||||    
T  7422524 ttagaataatgagtactaatgtggtgacttagctagttctagaaaatattatgaatcatcttaatttagaaggatctagaagttatcttgttaggggata 7422623  T
Q  350 atattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatga 449  Q
    | ||||||||| ||| |||||||||||||||||| ||||   || ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  7422624 acattgagtatgttatggtgcacttatcttattaagagtacacataagtctatataagcattgtatgccttattatgagaatcaatgaaaaatataatga 7422723  T
Q  450 attttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  7422724 attttctttctcttttctctagtttctctctctaatttcttgagtgtgatccctactcgaattgggtcgtatca 7422797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 250 - 523
Target Start/End: Original strand, 7426463 - 7426736
Alignment:
Q  250 ttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttgttaggggata 349  Q
    |||||||||||| ||  |||||||||||||||  ||||||||||  |||||| ||||| |||||||||| |||||||| ||| |||||||||||||||||    
T  7426463 ttagaataatgagtattaatgtggtgactcagctagttctagaaaatattataactcatcttaatctagtaggatctagaagttatcttgttaggggata 7426562  T
Q  350 atattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatga 449  Q
    ||||||||||| ||| |||||||||||||||||| ||||   || |||||||||||| |||||||||||| ||||| ||||||||||||||| |||||||    
T  7426563 atattgagtatgttatggtgcacttatcttattaagagtacacataagtctatataaacattgtatgccttattatgagaatcaatgaaaaatataatga 7426662  T
Q  450 attttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  7426663 attttctttctcttttctctaatttctctttctaatttctggagtgtgatccctactcgaattgggtcgtatca 7426736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 240 - 523
Target Start/End: Original strand, 33242717 - 33242998
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||||||||| ||||||| ||  || ||| |||||||||||  ||||||||||||| |||||| ||| |||| |||| |||||| || |||  || |||    
T  33242717 gataggatatt-agaataaggagcactaatatggtgactcagctagttctagaagttgttatgagtcatcttagtctataaggatttagaagacatattg 33242815  T
Q  340 ttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaa 439  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  33242816 ttaggggataatattgagtatgttagg-tgcacttatcttattatgagtatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaa 33242914  T
Q  440 aagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    || |||||||||||  ||||| || | ||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||    
T  33242915 aatataatgaatttcttttcttttatttctagtttctctctctaatttctggagtgtgatctctactcgaattgggtcgtatca 33242998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 13886583 - 13886691
Alignment:
Q  415 tgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgg 514  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13886583 tgcctcattattagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcaaattgg 13886682  T
Q  515 gtcgtatca 523  Q
    |||||||||    
T  13886683 gtcgtatca 13886691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 240 - 370
Target Start/End: Original strand, 13886455 - 13886585
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||||||| ||||||||| ||  || ||||||||||||| |  ||||||| || |||||||||||||||||||||||||| |||||||||||||| |||    
T  13886455 gataggatagttagaataaggagcactaatgtggtgactctgctagttctataaattattatgactcaccttaatctagaaagatctaaaaggtatattg 13886554  T
Q  340 ttaggggataatattgagtatcttagggtgc 370  Q
    ||| ||| ||||||| ||||| |||||||||    
T  13886555 ttaaggggtaatattaagtatgttagggtgc 13886585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 577
Target Start/End: Original strand, 4846397 - 4846448
Alignment:
Q  526 aacccttcaatagtttgttcatcttcatctagaatcacaaaacaattacaac 577  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  4846397 aacccttcaataatttgctcatcttcttctagaatcacaaaacaattacaac 4846448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 523
Target Start/End: Complemental strand, 16389250 - 16389217
Alignment:
Q  490 ggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||||||||||||||||||||||||||||||||    
T  16389250 ggagtgtgatccctactcgaattgggtcgtatca 16389217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 240 - 523
Target Start/End: Complemental strand, 42513345 - 42513062
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||||||||||||||||| ||  || ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| ||||| | |||    
T  42513345 gataggatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgactcaccttaatctagaaggatctagaaggtctattg 42513246  T
Q  340 ttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaa 439  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  42513245 ttaggggataatattgagtatgttagggtacacttatcttattatgagtatgcacaagtctatataagcattgtatgctttattatgagaatcaatgaaa 42513146  T
Q  440 aagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42513145 aatataatgaattttctttctcttttctctagtttctccctctaatttctggagtgtgatccctactcgaattgggtcgtatca 42513062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 240 - 447
Target Start/End: Complemental strand, 38572494 - 38572287
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||| |||||||||||||||| ||| |||||| ||||||||  |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  38572494 gatagtatatttagaataatgagtactaatgtgctgactcagctagttctagaagttattatgactcaccttaatctaaaaggatctagaaggtatcttg 38572395  T
Q  340 ttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaa 439  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||| | ||| ||||||||||||| |||||||||||| ||||| ||||| ||| |||    
T  38572394 ttaggggataatattgagtaagttagggtacacttatcttattatgaatatgcccaagtctatataaacattgtatgccttattatgagaattaataaaa 38572295  T
Q  440 aagataat 447  Q
    || |||||    
T  38572294 aatataat 38572287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 373 - 523
Target Start/End: Original strand, 30456307 - 30456456
Alignment:
Q  373 ttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagt 472  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||||| || |||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  30456307 ttatcttattatgagtatgca-aagtctatataagcattatatgccttatgattagaacgaatgaaaaatataatgaattttctttctcttttctctagt 30456405  T
Q  473 ttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30456406 ttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 30456456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 373 - 523
Target Start/End: Original strand, 30452702 - 30452847
Alignment:
Q  373 ttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagt 472  Q
    |||||||||||||||| |||| |||||||||||    |||||||||| || |||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  30452702 ttatcttattatgagtatgca-aagtctatata----ttgtatgccttatgattagaacgaatgaaaaatataatgaattttctttctcttttctctagt 30452796  T
Q  473 ttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30452797 ttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 30452847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 401 - 513
Target Start/End: Original strand, 11206499 - 11206611
Alignment:
Q  401 atataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatc 500  Q
    |||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11206499 atataaacattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatc 11206598  T
Q  501 cctactcgaattg 513  Q
     ||||||||||||    
T  11206599 tctactcgaattg 11206611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 350 - 523
Target Start/End: Original strand, 49017104 - 49017277
Alignment:
Q  350 atattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatga 449  Q
    ||||||||||| ||| | ||||||||||||||||||| | | ||||||| | |||||||||||||||||| ||||| ||| | ||||||||| |||||      
T  49017104 atattgagtatgttatgatgcacttatcttattatgactatccacaagtttgtataagcattgtatgccttattatgagacttaatgaaaaatataatat 49017203  T
Q  450 attttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||||||||| || ||||||||||||| |||||| || |||||||||||||||| ||||||| ||||||||||    
T  49017204 attttctttcttttatctctagtttctctctctaatttatggagtgtgatccctattcgaattaggtcgtatca 49017277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 344 - 524
Target Start/End: Original strand, 41712265 - 41712443
Alignment:
Q  344 gggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaaga 443  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||  ||||||||||||||||| |||||||| || ||||| ||||| ||||||||  |    
T  41712265 gggataatattaagtatgttagggtgcacttattttattatgagtaggcacaagtctatataagtattgtatgtcttattatgagaatgaatgaaaa--a 41712362  T
Q  444 taatgaattttctttctcttttctctag-tttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatcaa 524  Q
    |||  ||||| |||||| || ||||||| |||||| || ||| || ||||||||||||| ||||||||||||||||||||||    
T  41712363 taacaaatttcctttcttttgtctctagttttctctct-taatttttggagtgtgatccttactcgaattgggtcgtatcaa 41712443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 399 - 524
Target Start/End: Original strand, 6102928 - 6103054
Alignment:
Q  399 ctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttcttt-ctcttttctctag-tttctccctctaaattctggagtgt 496  Q
    |||||||||||||||||   |||| |||||||||||||||||| |||||||||||| ||| || || ||||||| |||||| || ||| || ||||||||    
T  6102928 ctatataagcattgtatctttcatgattagaatcaatgaaaaatataatgaattttttttgcttttatctctagttttctctct-taatttatggagtgt 6103026  T
Q  497 gatccctactcgaattgggtcgtatcaa 524  Q
    ||| |||||||||||||||| |||||||    
T  6103027 gattcctactcgaattgggttgtatcaa 6103054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 4257501 - 4257433
Alignment:
Q  373 ttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaa 441  Q
    ||||||||| |||||  | |||||| ||||| ||| |||||||||||||| |||| |||||||||||||    
T  4257501 ttatcttataatgaggatccacaagcctataaaagtattgtatgcctcatgattaaaatcaatgaaaaa 4257433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 2534562 - 2534511
Alignment:
Q  473 ttctccctctaaattct-ggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||| ||||||||||| ||||| |||||||||||| |||||||||||||||    
T  2534562 ttctctctctaaattctaggagtttgatccctactcaaattgggtcgtatca 2534511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 4257402 - 4257365
Alignment:
Q  486 ttctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  4257402 ttctggagtgtgatccctactcatattgggtcgtatca 4257365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 240 - 524
Target Start/End: Original strand, 8123395 - 8123679
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||||||||||||||||| ||  || ||| ||||||||||   |||||||||||||||||||||| ||||||||||||||||||||| ||| | | |||    
T  8123395 gataggatatttagaataaggagcactaatctggtgactcatctagttctagaagttattatgactgaccttaatctagaaggatctagaagatctattg 8123494  T
Q  340 ttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaa 439  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  8123495 ttaggggataatattgagtatgttagggtacacttatcttattatgagtatgcacaagtctatataagcattgtatgctttattatgagaatcaatgaaa 8123594  T
Q  440 aagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatcaa 524  Q
    || ||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  8123595 aatataatgaattttctttctcttttctttaatttctccctctaatttctgaagtgtgatccatactcgaattgggtcgtatcaa 8123679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 240 - 514
Target Start/End: Original strand, 671329 - 671603
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||||||||||||||||| ||  |  ||| | ||||||| |  | ||||||| |||||||||||||||||||||||||||||||| | ||| ||| |||    
T  671329 gataggatatttagaataaggagcattaatatagtgactcggctaattctagatgttattatgactcaccttaatctagaaggatccataagatatattg 671428  T
Q  340 ttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaa 439  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||| ||||| |||||||    
T  671429 ttaggggataatattgagtaggttagggtacacttatcttattatgagtatgcacaagtttatataatcattgtatgccttattatgagaattaatgaaa 671528  T
Q  440 aagataatgaattttctttctcttttctctag-tttctccctctaaattctggagtgtgatccctactcgaattgg 514  Q
    || |||||||||||||||||| || ||||||| |||||| || ||| ||||| ||||||||||| |||||||||||    
T  671529 aatataatgaattttctttcttttatctctagctttctctct-taatttctgaagtgtgatcccaactcgaattgg 671603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 396 - 524
Target Start/End: Original strand, 41709523 - 41709651
Alignment:
Q  396 agtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttctccctctaaattctggagtg 495  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41709523 agtctatataaacattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctatagtttctccctctaaattctggagtg 41709622  T
Q  496 tgatccctactcgaattgggtcgtatcaa 524  Q
    ||||| |||||||||||||||||||||||    
T  41709623 tgatctctactcgaattgggtcgtatcaa 41709651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 373 - 523
Target Start/End: Original strand, 24108697 - 24108848
Alignment:
Q  373 ttatcttattatgagtgtgca-caagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctag 471  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||| || || ||||||| |||||||||| ||||||||||| ||||   || |||||||    
T  24108697 ttattttattatgagtatgcaacaagtctatataagcattgtatgtcttatgattagaaccaatgaaaaatataatgaatttccttttgtttgtctctag 24108796  T
Q  472 -tttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
     ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||    
T  24108797 ttttcttcct-taatttctggagtgtgatccctactcgaattgggtcgtatca 24108848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 399 - 523
Target Start/End: Complemental strand, 10321991 - 10321869
Alignment:
Q  399 ctatataagcattgtatg-cctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtg 497  Q
    |||||||||||||||||| |||||  ||  |||||||||||||| ||||||||||| ||||||||| ||||||| || || ||||||||| |||||||||    
T  10321991 ctatataagcattgtatgtcctcacaat--gaatcaatgaaaaa-ataatgaatttcctttctcttatctctagcttatctctctaaattatggagtgtg 10321895  T
Q  498 atccctactcgaattgggtcgtatca 523  Q
    |||||||||| |||||||||||||||    
T  10321894 atccctactcaaattgggtcgtatca 10321869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 41709390 - 41709470
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaa 320  Q
    |||||||||| |||||||| || ||  |||||||||||||    ||||||||||| || ||||||||| ||||||||||||    
T  41709390 gataggatatctagaataaggaatataaatgtggtgactcctctagttctagaaggtagtatgactcatcttaatctagaa 41709470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 170; Significance: 8e-91; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 240 - 523
Target Start/End: Original strand, 36326369 - 36326640
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||| |||||||||||||||| ||  ||||||||||||||   ||||||||||||||||||||||||| |||||||||||||          |||||||    
T  36326369 gatagcatatttagaataatgagtattaatgtggtgactcatctagttctagaagttattatgactcacattaatctagaagg----------tatcttg 36326458  T
Q  340 ttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaa 439  Q
    ||||||||| ||||||||||| ||||||||||||||  ||||||||||| ||||  |||||||||||||||||||||| | ||||| |||||||||||||    
T  36326459 ttaggggatgatattgagtatgttagggtgcacttaggttattatgagtatgca--agtctatataagcattgtatgctttattatgagaatcaatgaaa 36326556  T
Q  440 aagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36326557 aatataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 36326640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 240 - 462
Target Start/End: Original strand, 30911922 - 30912144
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||||||| |||||||||||| ||| |||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  30911922 gataggatacttagaataatgagtactaatgtgatgactcggttagttctagaagttattatgactcaccttaatctagaaggatctaaaatatatcttg 30912021  T
Q  340 ttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaa 439  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  30912022 ttaggggataatattgagtatgttagggtgcacttattttattgtgagtatgcacaagtctatataagtattgtatgccttattatgagaatcaatgaaa 30912121  T
Q  440 aagataatgaattttctttctct 462  Q
    || ||||||||||||||||||||    
T  30912122 aatataatgaattttctttctct 30912144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 235 - 474
Target Start/End: Complemental strand, 55211972 - 55211737
Alignment:
Q  235 caaccgataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggta 334  Q
    |||| ||||||||||||||||||| ||  || ||||||| ||||| |  ||||||| ||||||| | |||||| ||||||||| ||||||| | ||||||    
T  55211972 caactgataggatatttagaataaggagcactaatgtggcgactcggctagttctaaaagttatcacgactcatcttaatctaaaaggatccataaggta 55211873  T
Q  335 tcttgttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaa 434  Q
    | ||| |||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||     |||||||||| ||||| ||||||||    
T  55211872 tattggtaggggataatattgagtatgttagggtgcacttatcttattatgaatatgcacaagtctatat-----ttgtatgccttattatgagaatcaa 55211778  T
Q  435 tgaaaaagataatgaattt-tctttctcttttctctagttt 474  Q
    ||||||| ||||||||||| | | |||||| ||||||||||    
T  55211777 tgaaaaatataatgaatttatttctctcttatctctagttt 55211737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 289 - 454
Target Start/End: Original strand, 32414652 - 32414821
Alignment:
Q  289 tagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttgttaggggataatattgagtatcttagggtgcacttatcttattatgagt 388  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||| ||||  |||||||||||| ||||| ||| ||||||||||||||||| |||||    
T  32414652 tagaagttattatgactcaccttaacctataaggatctagaaggtatattgtctggggataatattaagtatgttatggtgcacttatcttattttgagt 32414751  T
Q  389 gtgc----acaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaatttt 454  Q
     |||    |||||||||||||| |||||||||||| ||||  ||||||||| ||||| ||||||| ||||    
T  32414752 ttgcacaaacaagtctatataaacattgtatgccttattacgagaatcaataaaaaatataatgattttt 32414821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 425 - 523
Target Start/End: Original strand, 14029379 - 14029477
Alignment:
Q  425 ttagaatcaatgaaaaagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||||||||||||||| ||||||||||| |||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  14029379 ttagaatcaatgaaaaatataatgaatttcctttcttttatctctagtttctcactctaaattctggagtgtgatccctactcgaattgggccgtatca 14029477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 519
Target Start/End: Original strand, 33328221 - 33328354
Alignment:
Q  390 tgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttctccctctaaattc- 488  Q
    |||| |||||| |||||||||||||||| | || ||||||| |||||||| | ||||| ||||| |||||| |||||| ||||||||  || |||||||     
T  33328221 tgcataagtctgtataagcattgtatgctttataattagaaccaatgaaagatataatcaatttcctttcttttttct-tagtttctttctataaattca 33328319  T
Q  489 ----tggagtgtgatccctactcgaattgggtcgt 519  Q
        ||| ||| |||||||||||||||||| ||||    
T  33328320 attatggtgtgggatccctactcgaattggatcgt 33328354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 523
Target Start/End: Original strand, 1830895 - 1830939
Alignment:
Q  479 ctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||    
T  1830895 ctctagattctggagtgtgatccctacttgaattgggtcgtatca 1830939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 523
Target Start/End: Complemental strand, 19798095 - 19798051
Alignment:
Q  479 ctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  19798095 ctctaatttctggagtgtgatccctactcgaatcgggtcgtatca 19798051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 523
Target Start/End: Complemental strand, 19798340 - 19798296
Alignment:
Q  479 ctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||    
T  19798340 ctctaatttctggagtctgatccctactcgaattgggtcgtatca 19798296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 523
Target Start/End: Original strand, 30912141 - 30912185
Alignment:
Q  479 ctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||    
T  30912141 ctctaaattctggagtgtgatccgtactcgaattgagtcgtatca 30912185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 467 - 509
Target Start/End: Original strand, 32414847 - 32414889
Alignment:
Q  467 tctagtttctccctctaaattctggagtgtgatccctactcga 509  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  32414847 tctagtttctctctctaaattttggagtgtgatccctactcga 32414889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 523
Target Start/End: Original strand, 18319506 - 18319550
Alignment:
Q  479 ctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||    
T  18319506 ctctaatttctagagtgtgatccctactcgaatcgggtcgtatca 18319550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 523
Target Start/End: Complemental strand, 30911644 - 30911613
Alignment:
Q  492 agtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||||||||||||||||||||||||||||||    
T  30911644 agtgtgatccctactcgaattgggtcgtatca 30911613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 524
Target Start/End: Original strand, 16441851 - 16441897
Alignment:
Q  479 ctctaaattct-ggagtgtgatccctactcgaattgggtcgtatcaa 524  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||    
T  16441851 ctctaaattctaggagtgtgatccctactcaaattggatcgtatcaa 16441897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 3e-78; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 240 - 523
Target Start/End: Complemental strand, 18584169 - 18583886
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||||||||||||||||| ||  |  ||||||||| || ||  |||| || |||||||||||||||||||||||||||||||||||||||||||| ||     
T  18584169 gataggatatttagaataaggagcattaatgtggtggcttagctagttataaaagttattatgactcaccttaatctagaaggatctaaaaggtatatta 18584070  T
Q  340 ttaggggataatattgagtatcttagggtgcacttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaa 439  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| ||| |||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  18584069 ttaggggataatattgagtatgttagggtgcagttatcgtattataagtatgcacaagtctatataagcattgtatgctttattatgagaatcaatgaaa 18583970  T
Q  440 aagataatgaattttctttctcttttctctag-tttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    || ||| ||||||| |||||| || ||||||| |||||| || ||| ||||||||||| ||| ||||||||||||||||||||||    
T  18583969 aatatactgaatttcctttcttttatctctagttttctctct-taatttctggagtgtaatctctactcgaattgggtcgtatca 18583886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 373 - 523
Target Start/End: Complemental strand, 23405625 - 23405475
Alignment:
Q  373 ttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagt 472  Q
    |||||||| |||| || ||||||||||||| ||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  23405625 ttatcttactatgtgtatgcacaagtctatctaaacattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctctagt 23405526  T
Q  473 ttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23405525 ttctccctctaaattctggagtgtgatccctacttgaattgggtcgtatca 23405475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 240 - 367
Target Start/End: Original strand, 13087574 - 13087700
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||||||||| ||||||| ||  |  ||||||||||||| |  ||||||||||||||||||||||||||||||||||| | |||||| ||||||| |||    
T  13087574 gataggatattcagaataaggagcattaatgtggtgactcggctagttctagaagttattatgactcaccttaatctag-acgatctagaaggtatattg 13087672  T
Q  340 ttaggggataatattgagtatcttaggg 367  Q
    |||||||||||||| |||||| ||||||    
T  13087673 ttaggggataatatcgagtatgttaggg 13087700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 429 - 523
Target Start/End: Complemental strand, 21076035 - 21075941
Alignment:
Q  429 aatcaatgaaaaagataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||||||||||| ||| ||||||| |||||| || ||| ||||||||| | |||||||||||||||| ||||||||||||||| | ||||||||    
T  21076035 aatcaatgaaaaatatagtgaatttcctttcttttatctgtagtttctctcgctaaattctggagtgtcatccctactcgaatttgatcgtatca 21075941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 397 - 516
Target Start/End: Original strand, 9893767 - 9893886
Alignment:
Q  397 gtctatataagcattgtatg-cctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttctccctctaaattctggagtg 495  Q
    ||||||||||||||| |||| |||||| ||  || ||||||||||| |||||||||||||||||| |  ||||||||||||  | ||||||| || ||||    
T  9893767 gtctatataagcattttatgacctcataatggga-tcaatgaaaaatataatgaattttctttctttcatctctagtttctttcactaaattatgcagtg 9893865  T
Q  496 tgatccctactcgaattgggt 516  Q
    |||| ||||||| ||||||||    
T  9893866 tgatacctactcaaattgggt 9893886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 396 - 521
Target Start/End: Original strand, 13087701 - 13087825
Alignment:
Q  396 agtctatataagcattgtatgcctcattattagaatcaatgaaaaag-ataatgaattttctttctcttttctctagtttctccctctaaattctggagt 494  Q
    |||||||||||| ||||||||||| ||||| ||||| |||||||||  | |||||||||  ||||| || ||| ||   ||||  || ||||||||||||    
T  13087701 agtctatataagtattgtatgccttattatgagaatgaatgaaaaaatacaatgaatttattttcttttatctttaacctctc--tcgaaattctggagt 13087798  T
Q  495 gtgatccctactcgaattgggtcgtat 521  Q
    ||||| |||| ||||||||||||||||    
T  13087799 gtgatacctattcgaattgggtcgtat 13087825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 240 - 371
Target Start/End: Complemental strand, 21076258 - 21076127
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttg 339  Q
    ||||||||  ||||||||| || ||| ||||||||||||||   |||||||||||  | ||||| |||||||||| || ||||||||||   |||| |||    
T  21076258 gataggatggttagaataaggagtactaatgtggtgactcacctagttctagaagcaaatatgattcaccttaatttaaaaggatctaatctgtattttg 21076159  T
Q  340 ttaggggataatattgagtatcttagggtgca 371  Q
     ||| |  || |||||||||| ||||||||||    
T  21076158 ctagagagtattattgagtatattagggtgca 21076127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 528
Target Start/End: Complemental strand, 6392844 - 6392717
Alignment:
Q  401 atataagcattgtat-gcctcattattagaatcaatgaaaaagataatgaattttctttctcttttc--tctagtttctccctctaaattctggagtgtg 497  Q
    ||||||||||||||| | ||||| |||| ||||||||||||| ||||| || || || |   |||||  ||||| ||||| | |||||||| | ||||||    
T  6392844 atataagcattgtattgtctcatgattaaaatcaatgaaaaatataatcaaattcctct---ttttcattctagcttctctccctaaattcggaagtgtg 6392748  T
Q  498 atccctactcgaattgggtcgtatcaacaac 528  Q
    |||||||||||||||  ||||||||| ||||    
T  6392747 atccctactcgaattaagtcgtatcaccaac 6392717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 24618481 - 24618433
Alignment:
Q  374 tatcttattatgagtgtgcacaagtctatataagcattgtatgcctcat 422  Q
    ||||||||||||||| || | ||||||||||||| ||||||||||||||    
T  24618481 tatcttattatgagtatgtataagtctatataagaattgtatgcctcat 24618433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 524
Target Start/End: Complemental strand, 44085569 - 44085523
Alignment:
Q  479 ctctaaattct-ggagtgtgatccctactcgaattgggtcgtatcaa 524  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||    
T  44085569 ctctaaattctaggagtgtgatccctactcaaattggatcgtatcaa 44085523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 3e-53; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 377 - 523
Target Start/End: Original strand, 44761971 - 44762117
Alignment:
Q  377 cttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttct 476  Q
    |||| |||| || ||||||||||||||||| |||||||||||| ||||| | ||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  44761971 cttactatgtgtatgcacaagtctatataaacattgtatgccttattatgaaaatcaatgaaaaatataatgaattttttttctcttttctatagtttct 44762070  T
Q  477 ccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44762071 ccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 44762117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 377 - 523
Target Start/End: Original strand, 44765278 - 44765424
Alignment:
Q  377 cttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttct 476  Q
    |||| |||| || ||||||||||||||||| |||||||| ||| ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  44765278 cttactatgtgtatgcacaagtctatataaacattgtattccttattatgaaaatcaatgaaaaatataatgaattttctttctcttttctatagtttct 44765377  T
Q  477 ccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  44765378 ccctctaaattctggagtgtaatccctactcgaattgggtcgtatca 44765424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 523
Target Start/End: Complemental strand, 32519668 - 32519623
Alignment:
Q  479 ctctaaattct-ggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||    
T  32519668 ctctaaattctaggagtgtgatccctactcgaattgggtcctatca 32519623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 44765130 - 44765210
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaa 320  Q
    |||||||||| |||||||| || ||  |||||||||||||    ||||||||||| || ||||||||| ||||||||||||    
T  44765130 gataggatatctagaataaggaatataaatgtggtgactcccctagttctagaaggtagtatgactcatcttaatctagaa 44765210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 460
Target Start/End: Complemental strand, 14276685 - 14276624
Alignment:
Q  400 tatataagcattgta-tgcctcattattagaatcaatgaaaaagataatgaattttctttct 460  Q
    ||||||||||||||| ||| |||| |||| ||||||||||||| ||||| ||||| ||||||    
T  14276685 tatataagcattgtaatgcttcatgattaaaatcaatgaaaaatataatcaatttcctttct 14276624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 2e-48; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 373 - 523
Target Start/End: Original strand, 27387620 - 27387770
Alignment:
Q  373 ttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagt 472  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |  ||||||||| |||||||||||  ||||  |  ||||||||    
T  27387620 ttatcttattacgaggatgcacaagtctatataagcattgtatgcctcattattagcaggaatgaaaaatataatgaatttcttttccttcatctctagt 27387719  T
Q  473 ttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27387720 ttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 27387770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 391 - 523
Target Start/End: Complemental strand, 55322467 - 55322334
Alignment:
Q  391 gcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaaga-taatgaattttctttctcttttctctagtttctccctctaaattct 489  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||||| |||||| || ||||||| |||| | ||||||||||    
T  55322467 gcacaagtctatataagcattgtatgcctcattattaggatgaatgaaaaataataatgaatttcctttcttttatctctagcttctacttctaaattct 55322368  T
Q  490 ggagtgtgatccctactcgaattgggtcgtatca 523  Q
    ||||||||||||||||||||||||||||||||||    
T  55322367 ggagtgtgatccctactcgaattgggtcgtatca 55322334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 284 - 413
Target Start/End: Complemental strand, 20441157 - 20441029
Alignment:
Q  284 agttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttgttaggggataatattgagtatcttagggtgcacttatcttatta 383  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||||| |||| |||||| |||||||||||||| || | ||||||||||||||||||||    
T  20441157 agttctagaagttgttatgactcaccttaatttagaag-atctaaaaagtatattgttaagggataatattgagcatgtcagggtgcacttatcttatta 20441059  T
Q  384 tgagtgtgcacaagtctatataagcattgt 413  Q
    ||||| ||||||||||| || |||||||||    
T  20441058 tgagtatgcacaagtctgtacaagcattgt 20441029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 523
Target Start/End: Original strand, 36050668 - 36050813
Alignment:
Q  377 cttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttct 476  Q
    |||| |||| || ||||||||||||||||| |||||||||||| ||||| ||    ||||||||| |||||||||||  ||||| || ||||||||||      
T  36050668 cttactatgtgtatgcacaagtctatataaacattgtatgccttattatgaggga-aatgaaaaatataatgaatttcttttcttttatctctagttttc 36050766  T
Q  477 ccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
     | | ||| || |||||||||||||||||||||||||||||||||||    
T  36050767 tcttttaatttttggagtgtgatccctactcgaattgggtcgtatca 36050813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 523
Target Start/End: Original strand, 36053927 - 36054072
Alignment:
Q  377 cttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttct 476  Q
    |||| |||| || ||||||||||||||||| |||||||||||| ||||| ||    ||||||||| |||||||||||  ||||| || ||||||||||      
T  36053927 cttactatgtgtatgcacaagtctatataaacattgtatgccttattatgaggga-aatgaaaaatataatgaatttcttttcttttatctctagttttc 36054025  T
Q  477 ccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 523  Q
     | | ||| || |||||||||||||||||||||||||||||||||||    
T  36054026 tcttttaatttttggagtgtgatccctactcgaattgggtcgtatca 36054072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 24733642 - 24733766
Alignment:
Q  399 ctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctagtttctccctctaaat-tctggagtgtg 497  Q
    ||||||||||||||||||  |||| |||||||  ||||||||| ||||||||||| |||||| || | |||||||| || |||| ||| |||  ||||||    
T  24733642 ctatataagcattgtatgtttcatgattagaaggaatgaaaaatataatgaatttcctttcttttatatctagttt-tctctcttaatatctaaagtgtg 24733740  T
Q  498 atccctactcgaattgggtcgtatca 523  Q
    ||||||||| ||||||||| ||||||    
T  24733741 atccctacttgaattgggtggtatca 24733766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 36050520 - 36050600
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaa 320  Q
    |||||||||||||||||||||| ||| |||||||||||||    ||||||||||| || ||||||||| ||||||||||||    
T  36050520 gataggatatttagaataatgagtactaatgtggtgactcccctagttctagaaggtagtatgactcatcttaatctagaa 36050600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 36053779 - 36053859
Alignment:
Q  240 gataggatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaa 320  Q
    |||||||||||||||||||||| ||| |||||||||||||    ||||||||||| || ||||||||| ||||||||||||    
T  36053779 gataggatatttagaataatgagtactaatgtggtgactcccctagttctagaaggtagtatgactcatcttaatctagaa 36053859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 373 - 521
Target Start/End: Original strand, 12638012 - 12638158
Alignment:
Q  373 ttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctctag- 471  Q
    ||||||||| |||||  | ||||||  |||| |||||||||||||||||| || | ||||||||||||  ||||  ||||| |||||| || | |||||     
T  12638012 ttatcttataatgaggatccacaagcttataaaagcattgtatgcctcatgataataatcaatgaaaa--ataacaaatttcctttcttttatatctaga 12638109  T
Q  472 tttctccctctaaattctggagtgtgatccctactcgaattgggtcgtat 521  Q
    |||||| || ||| |||||||||| ||| |||||||||||||||||||||    
T  12638110 tttctctct-taatttctggagtgcgatacctactcgaattgggtcgtat 12638158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 528
Target Start/End: Complemental strand, 10129678 - 10129627
Alignment:
Q  479 ctctaaattct--ggagtgtgatccctactcgaattgggtcgtatcaacaac 528  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  10129678 ctctaaattctaaggagtgtgatccctactcgaattgggtcgtatcagcaac 10129627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 45736016 - 45736107
Alignment:
Q  373 ttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcat-tattagaatcaatgaaaaa--gataatgaattttctttctc 461  Q
    |||| ||||||||||  | ||||| |||| ||||||||||||||||||||  ||||||||||||||||||   ||||| |||||||||||||    
T  45736016 ttatattattatgagcattcacaaatctacataagcattgtatgcctcatagattagaatcaatgaaaaatttataatcaattttctttctc 45736107  T

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Target: chr2 (Bit Score: 84; Significance: 2e-39; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 284 - 415
Target Start/End: Original strand, 31211600 - 31211731
Alignment:
Q  284 agttctagaagttattatgactcaccttaatctagaaggatctaaaaggtatcttgttaggggataatattgagtatcttagggtgcacttatcttatta 383  Q
    ||||||||||||| ||||||||||| ||||||||||||||| || ||| ||| |||||||||||||||||||||||| |||| |||||||||||||| ||    
T  31211600 agttctagaagttgttatgactcactttaatctagaaggatttagaagatatattgttaggggataatattgagtatgttagagtgcacttatcttaata 31211699  T
Q  384 tgagtgtgcacaagtctatataagcattgtat 415  Q
    ||||| |||| ||||||||||||| |||||||    
T  31211700 tgagtatgcataagtctatataagtattgtat 31211731  T

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Target: chr2; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 31211861 - 31211963
Alignment:
Q  421 attattagaatcaatgaaaaagataatgaattttctttctcttttctctag-tttctccctctaaattctggagtgtgatccctactcgaattgggtcgt 519  Q
    ||||| ||||||||||||||| |||||||||||||||||| || ||||||| |||||| || ||| ||||||||||||||||||||||||||||| ||||    
T  31211861 attatgagaatcaatgaaaaatataatgaattttctttcttttatctctagttttctctct-taatttctggagtgtgatccctactcgaattggatcgt 31211959  T
Q  520 atca 523  Q
    ||||    
T  31211960 atca 31211963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 373 - 507
Target Start/End: Complemental strand, 45327554 - 45327420
Alignment:
Q  373 ttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaaaagataatgaattttctttctcttttctct-ag 471  Q
    |||||||| |||| || ||||||||||||||||||||||||||| || ||||| ||||  ||||||||| ||||| |||||  ||||| || ||||| |     
T  45327554 ttatcttactatgtgtatgcacaagtctatataagcattgtatgtcttattatgagaaaaaatgaaaaatataataaatttcttttcttttatctctaat 45327455  T
Q  472 tttctccctctaaattctggagtgtgatccctactc 507  Q
    |||||| || ||| ||||||||||||||||||||||    
T  45327454 tttctctct-taatttctggagtgtgatccctactc 45327420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 439
Target Start/End: Complemental strand, 40401048 - 40400982
Alignment:
Q  373 ttatcttattatgagtgtgcacaagtctatataagcattgtatgcctcattattagaatcaatgaaa 439  Q
    ||||||||| |||||| ||||||||||||| ||||||| ||||||||||||| || ||| |||||||    
T  40401048 ttatcttatcatgagtatgcacaagtctatttaagcatagtatgcctcattactataatgaatgaaa 40400982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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