View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4865-Insertion-7 (Length: 585)

Name: NF4865-Insertion-7
Description: NF4865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4865-Insertion-7
NF4865-Insertion-7
[»] chr7 (73 HSPs)
chr7 (376-585)||(5716410-5716620)
chr7 (180-317)||(27130334-27130469)
chr7 (39-167)||(5716652-5716780)
chr7 (180-313)||(22486398-22486531)
chr7 (175-313)||(15014402-15014540)
chr7 (180-313)||(21917336-21917469)
chr7 (180-313)||(23232043-23232176)
chr7 (180-313)||(23577191-23577324)
chr7 (194-313)||(31042255-31042374)
chr7 (180-313)||(1842898-1843031)
chr7 (180-313)||(18217833-18217966)
chr7 (180-313)||(23750738-23750871)
chr7 (184-313)||(31425517-31425646)
chr7 (208-317)||(38057632-38057741)
chr7 (180-312)||(6849213-6849345)
chr7 (180-313)||(11036511-11036644)
chr7 (180-309)||(20923960-20924089)
chr7 (180-313)||(23699827-23699960)
chr7 (180-313)||(24605842-24605975)
chr7 (180-313)||(27806022-27806155)
chr7 (180-313)||(28800882-28801015)
chr7 (180-313)||(47523652-47523785)
chr7 (178-313)||(32267351-32267485)
chr7 (180-298)||(23539251-23539369)
chr7 (180-313)||(816193-816326)
chr7 (180-313)||(1907359-1907492)
chr7 (180-313)||(7733314-7733447)
chr7 (188-313)||(20174024-20174149)
chr7 (180-313)||(37135287-37135420)
chr7 (188-313)||(39979634-39979759)
chr7 (180-313)||(40847437-40847570)
chr7 (180-303)||(3872189-3872312)
chr7 (180-303)||(3904480-3904603)
chr7 (180-313)||(9698540-9698673)
chr7 (208-313)||(10050866-10050971)
chr7 (187-304)||(11852021-11852138)
chr7 (180-313)||(20429469-20429602)
chr7 (208-313)||(22501598-22501703)
chr7 (184-313)||(48933140-48933269)
chr7 (180-303)||(1824202-1824325)
chr7 (180-303)||(4514779-4514902)
chr7 (180-307)||(21623031-21623157)
chr7 (214-313)||(36636510-36636609)
chr7 (180-313)||(27132723-27132856)
chr7 (180-309)||(36993828-36993957)
chr7 (180-298)||(2650830-2650948)
chr7 (180-313)||(42926421-42926555)
chr7 (220-313)||(45664772-45664865)
chr7 (182-313)||(2457674-2457803)
chr7 (180-313)||(21871576-21871705)
chr7 (223-317)||(25777157-25777251)
chr7 (187-313)||(26415428-26415554)
chr7 (214-303)||(26577279-26577368)
chr7 (180-317)||(33427690-33427826)
chr7 (182-288)||(27304899-27305005)
chr7 (240-313)||(687881-687954)
chr7 (208-313)||(11890177-11890282)
chr7 (180-313)||(24140454-24140587)
chr7 (175-311)||(14786632-14786768)
chr7 (180-305)||(15969796-15969922)
chr7 (343-395)||(7388211-7388263)
chr7 (235-317)||(15330262-15330344)
chr7 (251-307)||(10222702-10222758)
chr7 (342-394)||(16708411-16708463)
chr7 (342-394)||(17682647-17682699)
chr7 (342-394)||(46572166-46572218)
chr7 (340-395)||(43663050-43663105)
chr7 (220-285)||(1841824-1841889)
chr7 (342-395)||(7721437-7721490)
chr7 (360-393)||(21410667-21410700)
chr7 (180-232)||(687951-688003)
chr7 (180-244)||(38090336-38090400)
chr7 (135-175)||(41519276-41519316)
[»] chr6 (74 HSPs)
chr6 (180-313)||(9892967-9893100)
chr6 (175-313)||(28364915-28365053)
chr6 (180-313)||(2992619-2992752)
chr6 (180-313)||(15364460-15364593)
chr6 (181-313)||(25398006-25398138)
chr6 (180-313)||(495629-495762)
chr6 (180-313)||(6598468-6598601)
chr6 (180-313)||(12351588-12351721)
chr6 (184-313)||(22579355-22579484)
chr6 (180-307)||(15448395-15448522)
chr6 (183-313)||(12200698-12200828)
chr6 (180-313)||(12951712-12951845)
chr6 (180-313)||(18048792-18048925)
chr6 (180-313)||(22083842-22083975)
chr6 (180-313)||(24661011-24661144)
chr6 (180-312)||(26224433-26224565)
chr6 (180-298)||(5360428-5360546)
chr6 (207-313)||(12845007-12845113)
chr6 (180-313)||(21691497-21691631)
chr6 (180-313)||(17919540-17919673)
chr6 (207-312)||(23281791-23281896)
chr6 (180-309)||(30833962-30834091)
chr6 (181-313)||(21140943-21141075)
chr6 (180-303)||(6605498-6605621)
chr6 (180-307)||(9885253-9885380)
chr6 (180-303)||(28668114-28668237)
chr6 (180-313)||(2669313-2669446)
chr6 (180-305)||(11049753-11049878)
chr6 (180-313)||(16250804-16250937)
chr6 (180-313)||(20182149-20182282)
chr6 (180-313)||(21990177-21990309)
chr6 (180-313)||(22153709-22153842)
chr6 (185-309)||(9060099-9060222)
chr6 (184-303)||(5192195-5192314)
chr6 (181-303)||(11077663-11077785)
chr6 (219-313)||(27705426-27705520)
chr6 (180-313)||(1939244-1939377)
chr6 (180-313)||(14886565-14886698)
chr6 (180-313)||(18033528-18033660)
chr6 (214-313)||(5270396-5270496)
chr6 (181-303)||(14872133-14872255)
chr6 (208-313)||(343593-343698)
chr6 (180-305)||(26939599-26939724)
chr6 (180-313)||(27796836-27796969)
chr6 (180-305)||(33250710-33250835)
chr6 (219-303)||(33547560-33547644)
chr6 (188-287)||(6978307-6978406)
chr6 (182-313)||(12157380-12157511)
chr6 (208-303)||(13145016-13145111)
chr6 (184-287)||(14772691-14772794)
chr6 (207-313)||(12680213-12680319)
chr6 (183-297)||(18492389-18492503)
chr6 (184-313)||(12205191-12205320)
chr6 (188-313)||(22055622-22055747)
chr6 (187-303)||(12499230-12499346)
chr6 (187-303)||(12506559-12506675)
chr6 (187-303)||(12509555-12509671)
chr6 (229-313)||(14036624-14036708)
chr6 (180-288)||(15509185-15509293)
chr6 (180-303)||(15961409-15961532)
chr6 (188-313)||(11530229-11530354)
chr6 (221-313)||(11431684-11431775)
chr6 (224-312)||(19175823-19175910)
chr6 (180-303)||(10458778-10458901)
chr6 (174-303)||(6065451-6065580)
chr6 (180-305)||(12160849-12160973)
chr6 (181-303)||(11350196-11350315)
chr6 (184-310)||(13251385-13251511)
chr6 (343-395)||(7582148-7582200)
chr6 (340-395)||(20213107-20213162)
chr6 (208-303)||(20692841-20692936)
chr6 (340-395)||(22107130-22107185)
chr6 (222-307)||(3673177-3673262)
chr6 (269-309)||(13668085-13668125)
[»] chr1 (80 HSPs)
chr1 (180-313)||(19081732-19081865)
chr1 (180-313)||(19129620-19129753)
chr1 (180-313)||(38531172-38531305)
chr1 (180-313)||(12720813-12720946)
chr1 (180-313)||(6459221-6459354)
chr1 (180-313)||(9109977-9110110)
chr1 (180-313)||(12989856-12989989)
chr1 (180-313)||(14760871-14761004)
chr1 (180-313)||(15243089-15243222)
chr1 (180-313)||(22603552-22603685)
chr1 (180-313)||(29549422-29549555)
chr1 (180-313)||(45839296-45839429)
chr1 (180-316)||(46339447-46339583)
chr1 (182-313)||(16913581-16913712)
chr1 (184-307)||(41120743-41120866)
chr1 (180-307)||(50845332-50845459)
chr1 (180-313)||(13195587-13195720)
chr1 (180-313)||(20408162-20408295)
chr1 (180-313)||(41752437-41752570)
chr1 (180-313)||(52183682-52183815)
chr1 (184-307)||(4340417-4340540)
chr1 (180-303)||(28229457-28229580)
chr1 (180-313)||(6412055-6412188)
chr1 (180-313)||(17200012-17200145)
chr1 (180-317)||(51973424-51973561)
chr1 (185-313)||(9464107-9464235)
chr1 (217-313)||(13523000-13523096)
chr1 (185-313)||(18890556-18890684)
chr1 (180-303)||(46790014-46790137)
chr1 (175-313)||(18894897-18895035)
chr1 (180-313)||(20580913-20581047)
chr1 (207-313)||(41071864-41071970)
chr1 (180-313)||(7830035-7830168)
chr1 (180-313)||(12161818-12161951)
chr1 (180-313)||(22158806-22158939)
chr1 (180-313)||(23457901-23458034)
chr1 (180-313)||(46865247-46865380)
chr1 (180-303)||(19865258-19865381)
chr1 (184-307)||(46785964-46786087)
chr1 (175-313)||(7181552-7181690)
chr1 (180-286)||(25787999-25788105)
chr1 (180-313)||(9985329-9985462)
chr1 (220-313)||(12174808-12174901)
chr1 (184-313)||(17661054-17661183)
chr1 (208-313)||(22789621-22789726)
chr1 (188-317)||(6775887-6776015)
chr1 (180-313)||(9259185-9259318)
chr1 (180-313)||(13102320-13102453)
chr1 (220-313)||(29093596-29093689)
chr1 (188-313)||(30928388-30928513)
chr1 (188-304)||(11917799-11917914)
chr1 (180-308)||(50092300-50092428)
chr1 (180-303)||(8940996-8941119)
chr1 (180-307)||(9177110-9177237)
chr1 (208-311)||(26825246-26825349)
chr1 (208-313)||(32046880-32046985)
chr1 (180-313)||(48522522-48522655)
chr1 (213-285)||(41359020-41359092)
chr1 (180-287)||(13308822-13308929)
chr1 (208-313)||(41063201-41063306)
chr1 (251-313)||(14486705-14486767)
chr1 (219-313)||(16258527-16258621)
chr1 (180-313)||(17733955-17734089)
chr1 (180-313)||(18787915-18788045)
chr1 (180-278)||(27253857-27253955)
chr1 (340-395)||(1600247-1600302)
chr1 (270-316)||(3786401-3786447)
chr1 (240-313)||(12370003-12370076)
chr1 (221-285)||(45918947-45919011)
chr1 (340-395)||(6122860-6122915)
chr1 (208-285)||(9882070-9882144)
chr1 (340-395)||(44961831-44961886)
chr1 (340-394)||(26264296-26264350)
chr1 (273-311)||(39040860-39040898)
chr1 (213-287)||(49881074-49881148)
chr1 (340-393)||(7219875-7219928)
chr1 (208-313)||(52621158-52621263)
chr1 (255-307)||(30673504-30673556)
chr1 (342-394)||(45485817-45485869)
chr1 (135-175)||(52029949-52029989)
[»] chr2 (56 HSPs)
chr2 (174-313)||(13788051-13788190)
chr2 (180-313)||(44722932-44723065)
chr2 (180-312)||(28319581-28319713)
chr2 (180-307)||(37552233-37552360)
chr2 (180-313)||(41637618-41637751)
chr2 (180-313)||(41736172-41736305)
chr2 (185-313)||(1141536-1141664)
chr2 (185-313)||(32300451-32300579)
chr2 (180-313)||(20065076-20065209)
chr2 (180-317)||(27327612-27327749)
chr2 (180-313)||(30783338-30783471)
chr2 (180-307)||(12779606-12779733)
chr2 (180-303)||(43408513-43408636)
chr2 (180-313)||(32008952-32009086)
chr2 (180-313)||(15636737-15636870)
chr2 (180-313)||(18551255-18551388)
chr2 (180-313)||(22140366-22140499)
chr2 (180-313)||(28841344-28841477)
chr2 (181-313)||(28262364-28262496)
chr2 (180-303)||(7093578-7093701)
chr2 (219-313)||(31266354-31266448)
chr2 (183-313)||(37723997-37724127)
chr2 (180-313)||(2556095-2556228)
chr2 (180-313)||(8430296-8430429)
chr2 (180-313)||(21293713-21293846)
chr2 (180-313)||(23388380-23388513)
chr2 (180-313)||(29749405-29749538)
chr2 (180-313)||(32185832-32185965)
chr2 (180-311)||(13613095-13613226)
chr2 (180-295)||(44476377-44476492)
chr2 (175-305)||(36550844-36550973)
chr2 (180-307)||(23857960-23858086)
chr2 (180-307)||(40018808-40018935)
chr2 (180-305)||(14757123-14757248)
chr2 (180-273)||(27039910-27040003)
chr2 (180-313)||(37802381-37802513)
chr2 (183-303)||(38362276-38362396)
chr2 (222-313)||(18916444-18916535)
chr2 (180-303)||(26243323-26243446)
chr2 (188-313)||(44366007-44366132)
chr2 (207-307)||(13134649-13134749)
chr2 (180-313)||(26687692-26687826)
chr2 (240-313)||(27523011-27523084)
chr2 (219-313)||(36373900-36373992)
chr2 (213-313)||(9004343-9004443)
chr2 (180-244)||(22192248-22192312)
chr2 (219-287)||(35697481-35697549)
chr2 (266-313)||(27058404-27058451)
chr2 (270-313)||(16098996-16099039)
chr2 (340-395)||(21195631-21195686)
chr2 (208-287)||(31966555-31966633)
chr2 (340-395)||(33582039-33582094)
chr2 (251-313)||(9590470-9590532)
chr2 (208-310)||(18609517-18609619)
chr2 (342-395)||(1435131-1435184)
chr2 (190-307)||(8763640-8763757)
[»] chr8 (76 HSPs)
chr8 (180-313)||(17103867-17104000)
chr8 (180-313)||(17824618-17824751)
chr8 (179-313)||(9915042-9915175)
chr8 (180-303)||(8824837-8824960)
chr8 (180-307)||(30687944-30688071)
chr8 (175-305)||(27869248-27869378)
chr8 (184-313)||(3823135-3823264)
chr8 (180-313)||(4330980-4331113)
chr8 (180-313)||(4647757-4647890)
chr8 (180-313)||(8555306-8555439)
chr8 (180-313)||(19240869-19241002)
chr8 (180-313)||(19314053-19314186)
chr8 (180-313)||(24576026-24576159)
chr8 (180-313)||(27910766-27910899)
chr8 (180-313)||(27957185-27957318)
chr8 (180-313)||(29345073-29345206)
chr8 (180-303)||(13060933-13061056)
chr8 (180-307)||(19256220-19256347)
chr8 (180-303)||(19488063-19488186)
chr8 (175-313)||(18010057-18010195)
chr8 (180-298)||(25655860-25655978)
chr8 (180-313)||(6817056-6817189)
chr8 (180-313)||(32961661-32961794)
chr8 (180-313)||(43431561-43431694)
chr8 (180-307)||(11938753-11938879)
chr8 (180-303)||(32247921-32248044)
chr8 (180-313)||(17810300-17810433)
chr8 (180-313)||(21350480-21350613)
chr8 (180-305)||(22939323-22939448)
chr8 (180-313)||(33652569-33652702)
chr8 (207-303)||(26399036-26399132)
chr8 (177-313)||(37992101-37992237)
chr8 (180-307)||(25000433-25000560)
chr8 (180-313)||(6816385-6816518)
chr8 (180-309)||(15251608-15251736)
chr8 (180-313)||(24193198-24193331)
chr8 (184-303)||(23752292-23752411)
chr8 (180-303)||(25273330-25273452)
chr8 (180-307)||(30466956-30467083)
chr8 (180-303)||(31399510-31399633)
chr8 (180-313)||(29350925-29351059)
chr8 (180-313)||(16061941-16062074)
chr8 (188-313)||(31344182-31344307)
chr8 (207-307)||(5670198-5670298)
chr8 (180-307)||(24636660-24636788)
chr8 (175-313)||(18844541-18844679)
chr8 (184-312)||(6084252-6084378)
chr8 (180-312)||(9631406-9631539)
chr8 (180-313)||(40289423-40289555)
chr8 (184-313)||(3692176-3692306)
chr8 (219-313)||(5879206-5879300)
chr8 (213-285)||(19493690-19493762)
chr8 (180-288)||(21219242-21219350)
chr8 (180-264)||(42700659-42700743)
chr8 (180-282)||(8789873-8789975)
chr8 (175-303)||(33412974-33413095)
chr8 (338-395)||(44595810-44595867)
chr8 (180-284)||(10917858-10917962)
chr8 (175-307)||(17003270-17003402)
chr8 (185-303)||(14304241-14304359)
chr8 (180-258)||(25274654-25274732)
chr8 (254-305)||(24479874-24479925)
chr8 (340-395)||(27750796-27750851)
chr8 (338-395)||(11492028-11492085)
chr8 (207-274)||(2265407-2265474)
chr8 (340-395)||(11819842-11819897)
chr8 (338-393)||(12150685-12150740)
chr8 (340-395)||(33727828-33727883)
chr8 (360-395)||(35672480-35672515)
chr8 (208-287)||(41527730-41527809)
chr8 (340-395)||(43594273-43594328)
chr8 (338-380)||(30241130-30241172)
chr8 (340-394)||(44543957-44544011)
chr8 (342-395)||(27979225-27979278)
chr8 (342-395)||(28036494-28036547)
chr8 (343-395)||(8704425-8704477)
[»] chr5 (58 HSPs)
chr5 (180-313)||(20959512-20959645)
chr5 (184-313)||(25652589-25652718)
chr5 (184-313)||(11927792-11927921)
chr5 (180-313)||(16121841-16121974)
chr5 (180-313)||(17039633-17039766)
chr5 (180-313)||(33818563-33818696)
chr5 (180-313)||(36196398-36196531)
chr5 (174-313)||(17036408-17036547)
chr5 (184-313)||(618298-618427)
chr5 (180-317)||(2472716-2472853)
chr5 (180-313)||(8886853-8886986)
chr5 (180-303)||(746870-746993)
chr5 (175-313)||(10420249-10420387)
chr5 (180-313)||(12045731-12045864)
chr5 (180-309)||(13620129-13620258)
chr5 (184-317)||(35620350-35620482)
chr5 (180-303)||(38837673-38837796)
chr5 (180-313)||(23408984-23409118)
chr5 (187-313)||(23975639-23975765)
chr5 (180-313)||(7888801-7888934)
chr5 (180-313)||(8108862-8108995)
chr5 (180-317)||(28265477-28265614)
chr5 (188-309)||(32726736-32726857)
chr5 (180-313)||(36831892-36832025)
chr5 (180-303)||(4125190-4125313)
chr5 (180-303)||(10494751-10494874)
chr5 (180-307)||(26708587-26708714)
chr5 (180-307)||(26978321-26978448)
chr5 (180-309)||(16472183-16472312)
chr5 (180-313)||(12328228-12328361)
chr5 (180-313)||(15060977-15061110)
chr5 (188-313)||(27428022-27428147)
chr5 (180-295)||(16631876-16631991)
chr5 (180-303)||(25397790-25397913)
chr5 (180-317)||(5982645-5982783)
chr5 (180-313)||(7003732-7003863)
chr5 (181-303)||(35778155-35778277)
chr5 (180-313)||(23423758-23423891)
chr5 (180-313)||(36716202-36716335)
chr5 (180-303)||(36597342-36597465)
chr5 (219-313)||(17079409-17079503)
chr5 (220-313)||(33816800-33816893)
chr5 (188-307)||(3080706-3080825)
chr5 (188-307)||(20187951-20188070)
chr5 (184-307)||(24138847-24138970)
chr5 (180-303)||(40484058-40484181)
chr5 (180-313)||(13974080-13974213)
chr5 (180-303)||(17771970-17772093)
chr5 (180-287)||(33734975-33735082)
chr5 (208-313)||(25673259-25673363)
chr5 (255-317)||(22649406-22649468)
chr5 (221-313)||(18413560-18413652)
chr5 (203-302)||(31853112-31853212)
chr5 (208-284)||(23974606-23974682)
chr5 (360-395)||(19949571-19949606)
chr5 (341-395)||(28285319-28285373)
chr5 (260-313)||(29727928-29727981)
chr5 (208-287)||(9024243-9024323)
[»] chr4 (65 HSPs)
chr4 (180-313)||(22128314-22128447)
chr4 (180-309)||(8878889-8879018)
chr4 (180-313)||(30268990-30269123)
chr4 (180-313)||(30283066-30283199)
chr4 (180-313)||(32175739-32175872)
chr4 (180-313)||(55309214-55309348)
chr4 (180-309)||(16915375-16915504)
chr4 (180-313)||(27040027-27040160)
chr4 (180-313)||(46286231-46286364)
chr4 (180-312)||(19839182-19839314)
chr4 (180-303)||(30507999-30508122)
chr4 (182-313)||(38223512-38223643)
chr4 (180-313)||(9913260-9913393)
chr4 (188-313)||(25147723-25147848)
chr4 (180-307)||(4586760-4586887)
chr4 (180-313)||(5473851-5473984)
chr4 (180-317)||(19680426-19680563)
chr4 (180-313)||(22168270-22168403)
chr4 (187-303)||(29625337-29625453)
chr4 (180-303)||(7111948-7112071)
chr4 (180-303)||(9670481-9670604)
chr4 (180-307)||(18714910-18715037)
chr4 (184-307)||(25026565-25026688)
chr4 (180-303)||(38645762-38645885)
chr4 (180-313)||(2275679-2275813)
chr4 (183-313)||(37378628-37378758)
chr4 (180-313)||(1638449-1638582)
chr4 (180-313)||(5399611-5399744)
chr4 (180-313)||(13564917-13565050)
chr4 (180-313)||(33914061-33914194)
chr4 (184-313)||(45532585-45532714)
chr4 (185-313)||(18051841-18051969)
chr4 (180-312)||(36689680-36689812)
chr4 (180-307)||(13028818-13028945)
chr4 (180-303)||(38619859-38619982)
chr4 (180-307)||(54539294-54539421)
chr4 (180-313)||(24682329-24682460)
chr4 (180-317)||(44783480-44783618)
chr4 (180-307)||(4627080-4627207)
chr4 (180-303)||(42055409-42055532)
chr4 (180-298)||(9238627-9238745)
chr4 (184-313)||(12071964-12072093)
chr4 (180-298)||(9058954-9059072)
chr4 (235-313)||(22156658-22156736)
chr4 (180-317)||(25225097-25225232)
chr4 (250-316)||(37761914-37761980)
chr4 (207-303)||(9239310-9239406)
chr4 (185-309)||(30568006-30568130)
chr4 (208-287)||(313615-313694)
chr4 (180-303)||(4606831-4606954)
chr4 (184-303)||(12105995-12106113)
chr4 (208-303)||(14944758-14944853)
chr4 (208-313)||(18744100-18744205)
chr4 (221-313)||(3612997-3613089)
chr4 (208-287)||(6553832-6553911)
chr4 (180-309)||(29238429-29238558)
chr4 (221-313)||(39234944-39235034)
chr4 (180-307)||(30420035-30420162)
chr4 (208-307)||(34557191-34557290)
chr4 (180-287)||(23104376-23104484)
chr4 (342-395)||(8030159-8030212)
chr4 (342-395)||(21660099-21660152)
chr4 (342-395)||(21668863-21668916)
chr4 (338-395)||(28635760-28635817)
chr4 (135-171)||(26605728-26605764)
[»] chr3 (95 HSPs)
chr3 (180-313)||(27449088-27449221)
chr3 (180-317)||(29956368-29956505)
chr3 (180-317)||(30005523-30005660)
chr3 (181-313)||(1628215-1628347)
chr3 (180-313)||(5260937-5261070)
chr3 (180-313)||(9652578-9652711)
chr3 (180-313)||(11085344-11085477)
chr3 (181-313)||(28389973-28390105)
chr3 (180-303)||(26098823-26098946)
chr3 (180-307)||(48404866-48404993)
chr3 (184-313)||(19269870-19269999)
chr3 (180-313)||(19610338-19610471)
chr3 (208-313)||(27212811-27212916)
chr3 (175-307)||(13921331-13921463)
chr3 (180-303)||(13905040-13905163)
chr3 (180-303)||(21490036-21490159)
chr3 (180-313)||(7623533-7623666)
chr3 (180-313)||(8110339-8110472)
chr3 (180-313)||(11007685-11007818)
chr3 (180-313)||(11915758-11915891)
chr3 (180-313)||(16299861-16299994)
chr3 (180-313)||(18104532-18104665)
chr3 (180-313)||(19223449-19223582)
chr3 (184-313)||(25882570-25882699)
chr3 (180-313)||(26390636-26390769)
chr3 (180-313)||(46942487-46942620)
chr3 (185-313)||(18539804-18539932)
chr3 (180-303)||(5565732-5565855)
chr3 (180-307)||(21816727-21816854)
chr3 (180-303)||(43329765-43329888)
chr3 (180-313)||(1310961-1311094)
chr3 (180-313)||(11219138-11219271)
chr3 (180-317)||(11837216-11837353)
chr3 (208-313)||(17582331-17582436)
chr3 (180-313)||(18091549-18091682)
chr3 (180-313)||(23217210-23217343)
chr3 (180-313)||(31250088-31250221)
chr3 (180-313)||(31433737-31433870)
chr3 (180-313)||(36543749-36543882)
chr3 (221-313)||(26830485-26830577)
chr3 (180-303)||(5744426-5744549)
chr3 (180-303)||(5781385-5781508)
chr3 (180-303)||(17269606-17269729)
chr3 (180-298)||(10941667-10941785)
chr3 (180-313)||(8428171-8428304)
chr3 (180-313)||(17762642-17762775)
chr3 (180-313)||(18380024-18380157)
chr3 (180-313)||(19063962-19064095)
chr3 (208-313)||(19545510-19545615)
chr3 (180-309)||(27968919-27969048)
chr3 (180-313)||(29215992-29216125)
chr3 (180-313)||(30219338-30219471)
chr3 (188-313)||(49915451-49915576)
chr3 (185-313)||(4393357-4393485)
chr3 (180-303)||(15063994-15064117)
chr3 (180-303)||(23773487-23773610)
chr3 (184-307)||(29236050-29236173)
chr3 (180-303)||(46012730-46012853)
chr3 (180-313)||(15490035-15490167)
chr3 (180-313)||(21020065-21020198)
chr3 (180-313)||(36564441-36564574)
chr3 (180-303)||(1745490-1745612)
chr3 (180-303)||(3461312-3461435)
chr3 (219-313)||(20615384-20615478)
chr3 (187-313)||(29704041-29704167)
chr3 (180-293)||(8546265-8546378)
chr3 (180-273)||(20761952-20762045)
chr3 (208-307)||(28859597-28859696)
chr3 (188-303)||(50665646-50665761)
chr3 (184-313)||(8543469-8543597)
chr3 (180-312)||(10803721-10803854)
chr3 (180-276)||(6447248-6447344)
chr3 (188-307)||(21088758-21088875)
chr3 (188-287)||(37283549-37283648)
chr3 (180-307)||(47263267-47263394)
chr3 (208-298)||(6718725-6718815)
chr3 (180-307)||(10772055-10772183)
chr3 (180-303)||(6088230-6088353)
chr3 (255-317)||(26963326-26963388)
chr3 (207-308)||(29451099-29451200)
chr3 (340-395)||(52769938-52769993)
chr3 (180-313)||(27182660-27182791)
chr3 (342-388)||(29186517-29186563)
chr3 (338-395)||(7973620-7973677)
chr3 (340-393)||(26988215-26988268)
chr3 (221-313)||(20088400-20088492)
chr3 (340-395)||(8075082-8075137)
chr3 (340-395)||(13808840-13808895)
chr3 (260-307)||(35579607-35579654)
chr3 (208-287)||(50240772-50240851)
chr3 (184-301)||(13615427-13615544)
chr3 (357-395)||(16212927-16212965)
chr3 (202-279)||(27711192-27711269)
chr3 (343-395)||(160313-160365)
chr3 (135-175)||(39976443-39976483)
[»] scaffold0576 (1 HSPs)
scaffold0576 (180-313)||(9231-9364)
[»] scaffold0007 (4 HSPs)
scaffold0007 (180-313)||(3746-3879)
scaffold0007 (180-313)||(202778-202911)
scaffold0007 (251-313)||(276207-276269)
scaffold0007 (180-245)||(274667-274732)
[»] scaffold0014 (1 HSPs)
scaffold0014 (180-307)||(22221-22348)
[»] scaffold0603 (1 HSPs)
scaffold0603 (180-313)||(5981-6114)
[»] scaffold0219 (1 HSPs)
scaffold0219 (180-313)||(19607-19740)
[»] scaffold0076 (1 HSPs)
scaffold0076 (180-313)||(26487-26620)
[»] scaffold0006 (2 HSPs)
scaffold0006 (180-313)||(120989-121122)
scaffold0006 (182-303)||(84678-84799)
[»] scaffold0184 (1 HSPs)
scaffold0184 (181-317)||(7456-7592)
[»] scaffold0128 (1 HSPs)
scaffold0128 (183-307)||(10668-10792)
[»] scaffold0599 (1 HSPs)
scaffold0599 (180-313)||(7509-7642)
[»] scaffold0001 (3 HSPs)
scaffold0001 (180-313)||(84307-84440)
scaffold0001 (183-313)||(8115-8245)
scaffold0001 (183-313)||(21847-21977)
[»] scaffold0717 (1 HSPs)
scaffold0717 (180-313)||(920-1054)
[»] scaffold0069 (1 HSPs)
scaffold0069 (183-313)||(10162-10292)
[»] scaffold0047 (1 HSPs)
scaffold0047 (180-313)||(58586-58719)
[»] scaffold0058 (1 HSPs)
scaffold0058 (173-313)||(74536-74676)
[»] scaffold0240 (1 HSPs)
scaffold0240 (180-307)||(14992-15119)
[»] scaffold0009 (4 HSPs)
scaffold0009 (180-303)||(182544-182667)
scaffold0009 (180-305)||(219648-219773)
scaffold0009 (180-257)||(215665-215742)
scaffold0009 (135-175)||(145925-145965)
[»] scaffold0108 (1 HSPs)
scaffold0108 (180-313)||(12657-12789)
[»] scaffold0087 (1 HSPs)
scaffold0087 (180-313)||(37789-37922)
[»] scaffold0062 (1 HSPs)
scaffold0062 (180-313)||(43921-44054)
[»] scaffold0023 (1 HSPs)
scaffold0023 (180-313)||(39705-39838)
[»] scaffold0655 (1 HSPs)
scaffold0655 (184-313)||(3168-3295)
[»] scaffold0002 (1 HSPs)
scaffold0002 (180-303)||(439977-440100)
[»] scaffold0161 (1 HSPs)
scaffold0161 (181-311)||(6801-6931)
[»] scaffold0035 (1 HSPs)
scaffold0035 (181-287)||(74720-74826)
[»] scaffold0502 (1 HSPs)
scaffold0502 (188-313)||(10896-11021)
[»] scaffold0284 (1 HSPs)
scaffold0284 (208-287)||(1549-1628)
[»] scaffold0011 (1 HSPs)
scaffold0011 (180-266)||(17619-17705)
[»] scaffold0300 (1 HSPs)
scaffold0300 (338-395)||(4404-4461)
[»] scaffold0019 (1 HSPs)
scaffold0019 (184-305)||(173456-173578)
[»] scaffold0554 (1 HSPs)
scaffold0554 (180-245)||(9882-9947)
[»] scaffold0114 (1 HSPs)
scaffold0114 (208-287)||(36332-36411)
[»] scaffold0024 (1 HSPs)
scaffold0024 (253-313)||(112332-112392)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 1e-79; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 376 - 585
Target Start/End: Complemental strand, 5716620 - 5716410
Alignment:
Q  376 aatttagcttcttcaaaaaacaagggtgaaatcaatccagtgtcatcaattgtggattgcaaaccatgcaagaaatccaaaaatctaccattttaagcca 475  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  5716620 aatttagcttcttcaaaaaacaagggtgagatcaatccagtgtcatcgattgtggattgcaaaccatggcagaaatccaaaaatctaccattttaagcca 5716521  T
Q  476 ccatatcggccataaaatggcatggcgccgccataagttatttaa-aaattaagaccttggagtgtttctcttaaaatctcaggttcgatcctccttgtg 574  Q
    | ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| | |||  || |||||| ||||||||||||||||    
T  5716520 caatatcggccataaaatggcatggcgccgccataagttatttaacaacttaagaccttggagtgtgtttctctaagtctcagattcgatcctccttgtg 5716421  T
Q  575 tcaattttggt 585  Q
    | |||||||||    
T  5716420 ttaattttggt 5716410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 27130469 - 27130334
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||  ||||    
T  27130469 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaatataaaatgcctcacaaattcgttaatcgcaaaagttagtgacggaatt--agag 27130372  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27130371 ggatttcacattttccctctctaaatttccctcattaa 27130334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 5716780 - 5716652
Alignment:
Q  39 tgtgatctataaacaattaattttatggaactcatgggtatcatactatcaaagacaatcttgttttaaaactacaaaataacaagcgtgagatcatatt 138  Q
    ||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  5716780 tgtgatctataaacaattaattttatgaaactcaagggtatcatattatcaaagacagtcttgtttaaaaactacaaaataacaagggtgagatcatatt 5716681  T
Q  139 gatttgggacttaggagtgtgctccttct 167  Q
    |  |||||| |||||||||||||||||||    
T  5716680 ggcttgggatttaggagtgtgctccttct 5716652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 22486531 - 22486398
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  22486531 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 22486432  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| |||||| || ||||||||||||||    
T  22486431 ggatttcacgttttccgtcactaaatttccctca 22486398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 15014402 - 15014540
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| ||||||||||||| |||||| | ||| |||||  |||| |||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||    
T  15014402 ttacactactagaaaaagtaaaattagcgagggaaattggtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttagtgacggaatta 15014501  T
Q  275 gagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||  ||||||||| |||||| |||||||    
T  15014502 gagagggatttcatgttttccctcactaaatatccctca 15014540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 21917336 - 21917469
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  21917336 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 21917435  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| |||||| |||||||    
T  21917436 ggattttacgttttccctcactaaatgtccctca 21917469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 23232176 - 23232043
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||| ||    
T  23232176 ctactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagaaag 23232077  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  23232076 ggatttcatgttttccctcactaaatatccctca 23232043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 23577191 - 23577324
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||  | ||||||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||| ||    
T  23577191 ctactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagatag 23577290  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| ||||||||||||||    
T  23577291 ggatttcacgttttccctcactaaatttccctca 23577324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 194 - 313
Target Start/End: Complemental strand, 31042374 - 31042255
Alignment:
Q  194 aaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacatttt 293  Q
    |||||| |||||  |||| ||| ||||||||||||||||  ||||||||||| || ||||||||| ||||||||||||||||||||||||||||| ||||    
T  31042374 aaaattagagaggaaaattagttatggaaaaaataaaatttctcacaaattccttggtcgcaaaatttagtgacagaattagagagggatttcacgtttt 31042275  T
Q  294 ccctctctaaatttccctca 313  Q
    ||||||||||| ||||||||    
T  31042274 ccctctctaaaattccctca 31042255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 1843031 - 1842898
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||| |||    
T  1843031 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagggag 1842932  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  1842931 ggattttacgttttccctcactaaatttccctca 1842898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 18217966 - 18217833
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||||||||  ||||||||||    
T  18217966 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgaaattagagag 18217867  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || |||| |||| ||||||||||||||    
T  18217866 ggattttacgtttttcctcactaaatttccctca 18217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 23750738 - 23750871
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || |||| |||| |||||||| |||||||||||    
T  23750738 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgtaaaatttagtgacggaattagagag 23750837  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| |||||||||||| ||||||||||||||    
T  23750838 ggattttacattttccctcactaaatttccctca 23750871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 31425517 - 31425646
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||||||    
T  31425517 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctgtggtcgcaaaatttagtgacggaattagagagggat 31425616  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    || || ||||||||| ||||||||||||||    
T  31425617 tttacgttttccctcactaaatttccctca 31425646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 38057741 - 38057632
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| |||||||||||||||||||| |||||||||||| || ||||||||  |||||||| |||||| ||||||||||||| ||||||||| ||||||||    
T  38057741 aaattagtgatggaaaaaataaaattcctcacaaattccttggtcgcaaagtttagtgacggaattaaagagggatttcacgttttccctcgctaaattt 38057642  T
Q  308 ccctcattaa 317  Q
    ||||||||||    
T  38057641 ccctcattaa 38057632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 180 - 312
Target Start/End: Original strand, 6849213 - 6849345
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||| ||||| |||| |||||||||||| |||||||||||| |||||||| |||||||||||    
T  6849213 ctactagaaaaagcaaaattagcgagggaaattagtgacggagaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagag 6849312  T
Q  280 ggatttcacattttccctctctaaatttccctc 312  Q
     ||||| || |||| |||| |||||||||||||    
T  6849313 agattttacgttttacctcactaaatttccctc 6849345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 11036644 - 11036511
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  11036644 ctactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 11036545  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  11036544 ggatttcacgttttccctcacaaaatttccctca 11036511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 20923960 - 20924089
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| ||||||   ||| ||||| ||||||||||||||||||||  || ||||||| ||| ||| ||||| ||||||||||||||||||||    
T  20923960 ctactagaaaaagtaaaattatggagggaaattagtgatggaaaaaataaaatctcttacaaatttgttggtcacaaaatttagtgacagaattagagag 20924059  T
Q  280 ggatttcacattttccctctctaaatttcc 309  Q
    ||||||||  ||||||||| ||||||||||    
T  20924060 ggatttcatgttttccctcactaaatttcc 20924089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 23699827 - 23699960
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| ||||||||||||||| ||||    
T  23699827 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacagaattaaagag 23699926  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||||||||| | ||||||| ||||    
T  23699927 ggatttcacattttccctcacaaaatttctctca 23699960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 24605975 - 24605842
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||  | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  24605975 ctactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 24605876  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||| ||||||||| |||||||| |||||    
T  24605875 agatttcacgttttccctcactaaattttcctca 24605842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 27806155 - 27806022
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  27806155 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagag 27806056  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  27806055 ggatttcatgttttccctcactaaatatccctca 27806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 28801015 - 28800882
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| |||||  |||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  28801015 ctactagaaaaagcaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 28800916  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  28800915 ggatttcatgttttccctcactaaatatccctca 28800882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 47523652 - 47523785
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||  |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  47523652 ctactagaaaaaataaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 47523751  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  47523752 ggatttcatgttttccctcactaaatatccctca 47523785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 178 - 313
Target Start/End: Complemental strand, 32267485 - 32267351
Alignment:
Q  178 cgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagag 277  Q
    ||||||||||||| |||||||| | ||| || || ||||| ||||||| |||||| |||||||||||  ||  |||||||| ||||||||||||||||||    
T  32267485 cgctactagaaaatgcaaaattagggagggagattagtgacggaaaaa-taaaatccctcacaaatttcttgatcgcaaaatttagtgacagaattagag 32267387  T
Q  278 agggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  | ||||||||||||||||||||||||    
T  32267386 agggattttgcgttttccctctctaaatttccctca 32267351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 23539369 - 23539251
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  ||||||||||| ||| |||| |||||||||||    
T  23539369 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatagtcgcaaaatttaatgacggaattagagag 23539270  T
Q  280 ggatttcacattttccctc 298  Q
    ||||||||| | |||||||    
T  23539269 ggatttcacgtattccctc 23539251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 816193 - 816326
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||| |||||| |||| || | ||| ||||| ||||| |||||||| |||||  ||||||||||| || ||||||||| |||||||| |||||||||||    
T  816193 ctactggaaaaaacaaatttagggagggaaattagtgacggaaaaaacaaaatctctcacaaattctttggtcgcaaaatttagtgacggaattagagag 816292  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| |||||| ||||||||||| |||||    
T  816293 ggatttcacgttttccatctctaaattttcctca 816326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 1907492 - 1907359
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| ||||| ||||| |||||||||||||| ||||||| |||| || ||||||||| ||||||||  ||||||||||    
T  1907492 ctactaggaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaatccctcacatattctttggtcgcaaaatttagtgacgaaattagagag 1907393  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||| |||| |||||    
T  1907392 ggatttcatgttttccctcactagattttcctca 1907359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 7733314 - 7733447
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||| ||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||| ||| |||||||||||    
T  7733314 ctactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagagacggaattagagag 7733413  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  |||| |||| |||||| |||||||    
T  7733414 ggatttcatgttttacctcactaaatatccctca 7733447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 20174149 - 20174024
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||||||||||    
T  20174149 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 20174050  T
Q  288 cattttccctctctaaatttccctca 313  Q
    | ||||||||| | ||||||||||||    
T  20174049 cgttttccctcacaaaatttccctca 20174024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 37135287 - 37135420
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| ||||| ||||||  | |||| |||| |||||||| |||||||||||    
T  37135287 ctactagaaaaaacaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcataaattccatggtcgtaaaatttagtgacggaattagagag 37135386  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  37135387 ggatttcacgttttccctcacaaaatttccctca 37135420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 39979634 - 39979759
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| ||| |||| |||||||||||||||||||    
T  39979634 aaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagagagggatttca 39979733  T
Q  288 cattttccctctctaaatttccctca 313  Q
      ||||||||| ||||||||||||||    
T  39979734 tgttttccctcactaaatttccctca 39979759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 40847437 - 40847570
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| ||||| |||||| | ||| |||||  |||| |||||| ||||||| | |||||||||| || ||||||||| |||||||| |||||||||||    
T  40847437 ctactaggaaaagtaaaattagggagggaaatttgtgacggaaaacataaaattcgtcacaaattctttggtcgcaaaatttagtgacggaattagagag 40847536  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  40847537 ggatttcatgttttccctcactaaatttccctca 40847570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 3872189 - 3872312
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  3872189 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtctcaaaatttagtgacggaattagagag 3872288  T
Q  280 ggatttcacattttccctctctaa 303  Q
     ||||| || ||||||||| ||||    
T  3872289 agattttacgttttccctcactaa 3872312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 3904480 - 3904603
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||| ||||||  || ||||||||| |||||||| |||||||||||    
T  3904480 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcgcaaatttcttggtcgcaaaatttagtgacggaattagagag 3904579  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  3904580 ggattttacgttttccctcactaa 3904603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 9698540 - 9698673
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||| ||| |||| | |||||||||| || |||  |||| |||||||| |||||||||||    
T  9698540 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaataatgaaattcatcacaaattccttggtcataaaatttagtgacggaattagagag 9698639  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | |||| || ||||||||| ||||||||||||||    
T  9698640 gaattttacgttttccctcactaaatttccctca 9698673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 10050866 - 10050971
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| ||||||||||||||||| || ||||||||| ||||||||    
T  10050866 aaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 10050965  T
Q  308 ccctca 313  Q
    ||||||    
T  10050966 ccctca 10050971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 187 - 304
Target Start/End: Complemental strand, 11852138 - 11852021
Alignment:
Q  187 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 286  Q
    ||||||||||||| | |||||||||  ||||  |||||||||||||| ||||||||||| || ||| ||||| |||||||| |||||||||| |||||||    
T  11852138 aaaaagcaaaattagggagagaaatttgtgacagaaaaaataaaatgtctcacaaattctttggtcacaaaatttagtgacggaattagagaaggatttc 11852039  T
Q  287 acattttccctctctaaa 304  Q
    |  |||||||||||||||    
T  11852038 aggttttccctctctaaa 11852021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 20429602 - 20429469
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||    || ||||| ||||| ||||||||| |||| |||||||||||   | |||| |||| |||||||| |||||||||||    
T  20429602 ctactagaaaaagcaaaattaacaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgtaaaatttagtgacggaattagagag 20429503  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  20429502 ggatttcacgttttccctcacaaaatttccctca 20429469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 22501703 - 22501598
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| ||||||||||||||   |||||||||| || | ||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  22501703 aaattagtgacggaaaaaataaaatctttcacaaattctttggccgcaaaatttaatgacggaattagagagggatttcacgttttccctctctaaattt 22501604  T
Q  308 ccctca 313  Q
    ||||||    
T  22501603 ccctca 22501598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 48933269 - 48933140
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | |||  |||| ||||| |||||||||||||| ||||||||||||  | ||||||||| |||||||| |||||||||||| ||    
T  48933269 tagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagaggaat 48933170  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    ||||| ||||  ||| | ||||||||||||    
T  48933169 ttcacgttttttctcacaaaatttccctca 48933140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 1824202 - 1824325
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  1824202 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 1824301  T
Q  280 ggatttcacattttccctctctaa 303  Q
    | |||||| |||||||||| ||||    
T  1824302 gaatttcatattttccctcactaa 1824325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 4514902 - 4514779
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| |||||||  ||||||||||| || ||||||||| |||||||  |||||||||||    
T  4514902 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaatttctcacaaattctttggtcgcaaaatttagtgaaggaattagagag 4514803  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||||| |||||||||| ||||    
T  4514802 ggatttcatattttccctcactaa 4514779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 21623157 - 21623031
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||  | ||| ||||| ||||| ||||||||| |||| |||||||||||| || | ||||||| |||||||  |||||||||||    
T  21623157 ctactagaaaaagcaaaata-gcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgggcgcaaaatttagtgatggaattagagag 21623059  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || ||||||||| ||||||||    
T  21623058 ggattttacgttttccctcactaaattt 21623031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 214 - 313
Target Start/End: Complemental strand, 36636609 - 36636510
Alignment:
Q  214 gtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||||||||||  ||||||||| |||||||| |||||    
T  36636609 gtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttgcctca 36636510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 27132723 - 27132856
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| ||||| |||||  || | |||||||||||||| | ||||||||| ||| || |||||| ||||||||||||||||||||    
T  27132723 ctactagaaaaagtaaaattagagagggaaattggtaacggaaaaaataaaatccatcacaaatttgtttgttgcaaaatttagtgacagaattagagag 27132822  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
      ||||| | |||| ||||||  |||||||||||    
T  27132823 atatttcgcgtttttcctctcacaatttccctca 27132856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 36993957 - 36993828
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  ||||||||||| ||||||| |||||||||||  ||||||| |||| |||||||| |||||||| ||    
T  36993957 ctactaggaaaagcaaaattagggagggaaatttgtgatggaaaatataaaattcctcacaaatttcttagtcgtaaaatttagtgacggaattagaaag 36993858  T
Q  280 ggatttcacattttccctctctaaatttcc 309  Q
     |||||||  |||| |||| ||||||||||    
T  36993857 agatttcatgtttttcctcactaaatttcc 36993828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 2650830 - 2650948
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||| | ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  2650830 ctactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 2650929  T
Q  280 ggatttcacattttccctc 298  Q
    |||||| || |||||||||    
T  2650930 ggattttacgttttccctc 2650948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 42926421 - 42926555
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    ||||||||||||  |||||| | |||  |||| ||||| |||||||| | |||| |||||||||||  |||||||||||| |||||||| ||||||||||    
T  42926421 ctactagaaaaaataaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcacaaatttcttagtcgcaaaatttagtgacggaattagaga 42926520  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||  |||| |||| |||||| |||||||    
T  42926521 gggatttcatgtttttcctcactaaatatccctca 42926555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 313
Target Start/End: Complemental strand, 45664865 - 45664772
Alignment:
Q  220 gaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||| |||| |||||||||||| ||  |||||||| |||||||| ||||||||||||||||| || ||||||||| ||| ||||||||||    
T  45664865 gaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagagagggattttacgttttccctcactatatttccctca 45664772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 313
Target Start/End: Complemental strand, 2457803 - 2457674
Alignment:
Q  182 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 281  Q
    ||||| |||||||||||| | ||| ||||| |||||  ||||| |||||||  ||||||||||| || ||||||||| |||||||| ||||| |||||||    
T  2457803 actaggaaaagcaaaattagggagggaaattagtgacagaaaatataaaat--ctcacaaattcttttgtcgcaaaatttagtgacggaatttgagaggg 2457706  T
Q  282 atttcacattttccctctctaaatttccctca 313  Q
    ||||||  ||||||||| | |||||| |||||    
T  2457705 atttcatgttttccctcacaaaattttcctca 2457674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 21871705 - 21871576
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | |||  |||||||||  ||||||||| |||| |||||||||||  || ||||||||| |||||||| ||||||||       
T  21871705 ctactagaaaaaacaaaattagcgaggaaaatcagtggcggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga--- 21871609  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||||| |||||||||||| |||||||| |||||    
T  21871608 -gattttacattttccctcactaaattttcctca 21871576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 317
Target Start/End: Original strand, 25777157 - 25777251
Alignment:
Q  223 aaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctcattaa 317  Q
    |||||||||| |||||||||||  ||  ||| |||| |||||||   |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  25777157 aaaataaaatccctcacaaattttttgatcgtaaaatttagtgatgaaattagagagtgatttcacgttttccctctctaaatttccctcattaa 25777251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 313
Target Start/End: Complemental strand, 26415554 - 26415428
Alignment:
Q  187 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 286  Q
    |||||| |||||| ||||  ||||| ||||||||||||||||||||  ||||||||||  ||  ||| |||| ||||||||  ||||| ||||||||||     
T  26415554 aaaaagtaaaattagagaaggaaattagtgatggaaaaaataaaatttctcacaaattttttgatcgtaaaatttagtgacgaaattaaagagggatttt 26415455  T
Q  287 acattttccctctctaaatttccctca 313  Q
    || |||| |||||||||| ||||||||    
T  26415454 acgtttttcctctctaaaattccctca 26415428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 26577368 - 26577279
Alignment:
Q  214 gtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 303  Q
    |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| | |||||||||||||||||  ||||||||| ||||    
T  26577368 gtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggtattagagagggatttcatgttttccctcactaa 26577279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 33427826 - 33427690
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| |||||   ||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  33427826 ctactagaaaaaacaaaattagcgagggaaattagtgacc-aaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagag 33427728  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
    | ||||||  ||||||||| |||| | ||||| |||||    
T  33427727 gaatttcatgttttccctcactaagtatcccttattaa 33427690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 27305005 - 27304899
Alignment:
Q  182 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 281  Q
    ||||| |||| ||||||| | ||| ||||| |||||  ||||||||||||| || ||||||||| || | ||||||| |||||||| |||||||||||||    
T  27305005 actaggaaaaacaaaattagggagggaaattagtgacagaaaaaataaaatcccccacaaattccttggccgcaaaatttagtgacggaattagagaggg 27304906  T
Q  282 atttcac 288  Q
    || ||||    
T  27304905 atgtcac 27304899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 687954 - 687881
Alignment:
Q  240 aaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||  ||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||    
T  687954 aaattcctttgtcgcaaagtttagtgacagaattagagaaggattttacattttccctcactaaatttctctca 687881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 11890177 - 11890282
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| |||||||||||||| ||||| |||||| || ||| ||||| ||||||||  | |||| ||||||| ||| |||||||||| ||||||||    
T  11890177 aaattagtgacggaaaaaataaaatccctcataaattctttggtctcaaaatttagtgacgaagttagcgagggatatcatattttccctcactaaattt 11890276  T
Q  308 ccctca 313  Q
     |||||    
T  11890277 tcctca 11890282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 24140587 - 24140454
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| ||||| |||||| | |||  ||||  |||| |||||| ||||||| |||||||||||| || |||| |||| ||| |||| ||||| ||||     
T  24140587 ctactaggaaaagtaaaattagggaggaaaatttgtgacggaaaatataaaattcctcacaaattctttggtcgtaaaatttaatgacggaattggagaa 24140488  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| |  ||||||||| ||||||||||||||    
T  24140487 ggattttatgttttccctcactaaatttccctca 24140454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 14786632 - 14786768
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| ||| |||||||| ||||||| | |||  |||| |||||  |||||||| |||| |||||||||||  || ||||||||| |||||||| ||||||    
T  14786632 ttacactattagaaaaaacaaaattagtgaggaaaattagtgacagaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggaatta 14786731  T
Q  275 gagagggatttcacattttccctctctaaatttccct 311  Q
     | ||| |||| || |||||||||  |||||||||||    
T  14786732 aaaaggaattttacgttttccctcgttaaatttccct 14786768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 305
Target Start/End: Complemental strand, 15969922 - 15969796
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    ||||||||||||| ||||||   ||| || || ||||| |||||||| | ||||  ||||||||||| || |||| |||| |||||||| ||||||||||    
T  15969922 ctactagaaaaagtaaaattaatgagggatattagtgacggaaaaaaatgaaatttctcacaaattctttggtcgtaaaatttagtgacggaattagaga 15969823  T
Q  279 gggatttcacattttccctctctaaat 305  Q
    || ||||||  ||||||||| ||||||    
T  15969822 ggaatttcatgttttccctcactaaat 15969796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 7388263 - 7388211
Alignment:
Q  343 ttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||| ||||||    
T  7388263 ttcgattctctttagtaccaatttggattgtctaatttagcttcttaaaaaaa 7388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 15330262 - 15330344
Alignment:
Q  235 ctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctcattaa 317  Q
    ||||||||||  || ||||||||| ||||||||||||||||||||  ||||||  |||| |||  |||||| |||||||||||    
T  15330262 ctcacaaatttcttggtcgcaaaatttagtgacagaattagagagaaatttcaagtttttccttactaaatatccctcattaa 15330344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 10222702 - 10222758
Alignment:
Q  251 tcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||||||| ||| |||||||||||||||||||||| || |||||  |||||||||||    
T  10222702 tcgcaaaatttaatgacagaattagagagggattttacgttttctttctctaaattt 10222758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 16708463 - 16708411
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaa 394  Q
    ||||||||||||  | ||||||||| ||| |||||||||||||||||||||||    
T  16708463 gttcgattctctccaatatcaatttagatggactaatttagcttcttcaaaaa 16708411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 17682699 - 17682647
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaa 394  Q
    ||||||||||||  | ||||||||| ||| |||||||||||||||||||||||    
T  17682699 gttcgattctctccaatatcaatttagatggactaatttagcttcttcaaaaa 17682647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 46572218 - 46572166
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaa 394  Q
    |||||||||||| | || ||||||||| | |||||||||||||||||||||||    
T  46572218 gttcgattctctctggtgtcaatttggttggactaatttagcttcttcaaaaa 46572166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 43663105 - 43663050
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||| |||||   |||||||||||| | ||||||||||||||||||||||||    
T  43663105 aggttcgaatctctccggtatcaatttgggtggactaatttagcttcttcaaaaaa 43663050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 1841824 - 1841889
Alignment:
Q  220 gaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggattt 285  Q
    ||||||||||||| |||||||||||| ||  | |||||| ||| |||  |||||||||||||||||    
T  1841824 gaaaaaataaaatccctcacaaattccttgattgcaaaatttactgaaggaattagagagggattt 1841889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 7721437 - 7721490
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||| | || ||||||||||| || ||||||||||||||| |||||    
T  7721437 gttcgattctctctggtgtcaatttggatggaataatttagcttcttctaaaaa 7721490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 393
Target Start/End: Complemental strand, 21410700 - 21410667
Alignment:
Q  360 tcaatttggatagactaatttagcttcttcaaaa 393  Q
    ||||||||||||||||||||||||||| ||||||    
T  21410700 tcaatttggatagactaatttagcttcgtcaaaa 21410667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 688003 - 687951
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaat 232  Q
    |||||||||||||||||||| | ||| ||||||| ||| | ||||||||||||    
T  688003 ctactagaaaaagcaaaattagcgagggaaatcaatgacgaaaaaaataaaat 687951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 38090400 - 38090336
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaatt 244  Q
    ||||||| || ||||||||| | ||| |||||  |||| |||||||||||||| |||||||||||    
T  38090400 ctactaggaatagcaaaattagggagggaaatttgtgacggaaaaaataaaatccctcacaaatt 38090336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 41519316 - 41519276
Alignment:
Q  135 tattgatttgggacttaggagtgtgctccttctcaaggtct 175  Q
    |||||| |||||| |||||||||||||||| ||||||||||    
T  41519316 tattgacttgggatttaggagtgtgctcctcctcaaggtct 41519276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 74)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 9893100 - 9892967
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  9893100 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 9893001  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| ||||||||||||||    
T  9893000 ggatttcacgttttccctcactaaatttccctca 9892967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 28365053 - 28364915
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||    
T  28365053 ttacactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatta 28364954  T
Q  275 gagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||| || ||||||||| ||||||||||||||    
T  28364953 gagagggattttacgttttccctcactaaatttccctca 28364915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 2992752 - 2992619
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| ||||||| |||| | ||| ||||| |||||||||||||||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  2992752 ctactaggaaaagcataattagcgagggaaattagtgatggaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 2992653  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  2992652 ggatttcatgttttccctcactaaatatccctca 2992619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 15364460 - 15364593
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||     
T  15364460 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaa 15364559  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  15364560 ggattttacgttttccctcactaaatttccctca 15364593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 181 - 313
Target Start/End: Complemental strand, 25398138 - 25398006
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||||    
T  25398138 tactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagg 25398039  T
Q  281 gatttcacattttccctctctaaatttccctca 313  Q
    ||||| || ||||||||| ||||||||||||||    
T  25398038 gattttacgttttccctcactaaatttccctca 25398006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 495629 - 495762
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  495629 ctactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 495728  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||||| || ||||||||| ||||||||||||||    
T  495729 tgattttacgttttccctcactaaatttccctca 495762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 6598601 - 6598468
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  6598601 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattacttggtcgcaaaatttagtgacggaattagagag 6598502  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  6598501 ggatttcaagttttccctcactaaatatccctca 6598468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 12351588 - 12351721
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| | ||||   ||| ||||| ||||| |||||||||||||| |||||||||||| |||||||||||| ||| |||| |||||||||||    
T  12351588 ctactagaaaaagtataattaaggagggaaattagtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttaatgacggaattagagag 12351687  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
      ||||||| ||||||||||||||||||||||||    
T  12351688 aaatttcacgttttccctctctaaatttccctca 12351721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 22579355 - 22579484
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||||||    
T  22579355 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatttagtgacggaattagagagggat 22579454  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    ||||| ||||||||| | ||||||||||||    
T  22579455 ttcacgttttccctcacaaaatttccctca 22579484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 15448522 - 15448395
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| ||| |||||||| ||| |||| |||||||||||    
T  15448522 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttaatcgcaaaatttaatgacggaattagagag 15448423  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || ||||||||| ||||||||    
T  15448422 ggattttacgttttccctcactaaattt 15448395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 12200828 - 12200698
Alignment:
Q  183 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    ||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||  ||||||||||||||    
T  12200828 ctagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgagggaattagagaggga 12200729  T
Q  283 tttcacattttccctctctaaatttccctca 313  Q
    ||||| |||||||||| |||||| |||||||    
T  12200728 tttcatattttccctcactaaatatccctca 12200698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 12951845 - 12951712
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| ||||| |||||  |||| |||||| |||||||  ||||||||||| || ||||||||| ||| |||| |||||||||||    
T  12951845 ctactaggaaaagcaaaattagagagggaaatttgtgacggaaaacataaaatttctcacaaattccttggtcgcaaaatttaatgacggaattagagag 12951746  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  12951745 ggatttcatgttttccctcactaaatttccctca 12951712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 18048925 - 18048792
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||| ||||||| |||||  |||| ||||| ||||||||||||||  |||||||||||||| ||||||||| ||||||| |||||||| |||    
T  18048925 ctactaggaaaaacaaaattagagaggaaaattagtgacggaaaaaataaaatttctcacaaattcgttggtcgcaaaatttagtgagagaattagggag 18048826  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  |||| |||| ||||||||||||||    
T  18048825 ggatttcatgtttttcctcactaaatttccctca 18048792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 22083975 - 22083842
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| || ||||| |||||||||||    
T  22083975 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaattttgtgacggaattagagag 22083876  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  22083875 ggatttcatgttttccctcactaaatttccctca 22083842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 24661011 - 24661144
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||| |||| |||||||||||    
T  24661011 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagagag 24661110  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||  ||||||||| |||||| |||||||    
T  24661111 agatttcatgttttccctcactaaatatccctca 24661144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 26224565 - 26224433
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||| ||||| |||||||| |||||||||||    
T  26224565 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcacaaaatttagtgacggaattagagag 26224466  T
Q  280 ggatttcacattttccctctctaaatttccctc 312  Q
    ||||||||  ||||||||| |||||| ||||||    
T  26224465 ggatttcatgttttccctcactaaatatccctc 26224433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 5360546 - 5360428
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||||||||||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  5360546 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattttttggtcgcaaaatttagtgacggaattagagag 5360447  T
Q  280 ggatttcacattttccctc 298  Q
     ||||| || |||||||||    
T  5360446 agattttacgttttccctc 5360428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 12845113 - 12845007
Alignment:
Q  207 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 306  Q
    ||||| ||||| ||||||||||||||  ||||||||||| || ||||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||    
T  12845113 gaaattagtgacggaaaaaataaaattgctcacaaattctttggtcgcaaaatttagtgacggaattagagagagatttcacgttttccctctctaaatt 12845014  T
Q  307 tccctca 313  Q
    | |||||    
T  12845013 ttcctca 12845007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 21691497 - 21691631
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaa-tcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||| |||||| |||||| ||||| |||| | ||||||| ||||||||||||  ||||||||||| || ||||||||| ||||||||  |||||||||    
T  21691497 ctactaaaaaaagtaaaattagagagggaaaattagtgatgaaaaaaataaaatttctcacaaattctttggtcgcaaaatttagtgacgaaattagaga 21691596  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||| |||| |||||||||| ||||||||    
T  21691597 gggatttcacgtttttcctctctaaaattccctca 21691631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 17919673 - 17919540
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||||||||||| ||| ||||||||| |||| | ||| |||||| || ||||||||| |||||||| |||||||||||    
T  17919673 ctactagaaaaaacaaaattagcgagagaaatcaatgacggaaaaaatgaaattcatcataaattccttggtcgcaaaatttagtgacggaattagagag 17919574  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| ||| ||||||||  || ||||||||||    
T  17919573 ggattttacagtttccctcattacatttccctca 17919540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 207 - 312
Target Start/End: Complemental strand, 23281896 - 23281791
Alignment:
Q  207 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 306  Q
    ||||| |||||||||||||||||||| |||||||||||   | ||||||||| |||||||| |||||||||||||||||||| ||||||||| | |||||    
T  23281896 gaaattagtgatggaaaaaataaaattcctcacaaattttatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatt 23281797  T
Q  307 tccctc 312  Q
    ||||||    
T  23281796 tccctc 23281791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 30833962 - 30834091
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||| ||||  || ||||||||| ||| ||||||||||||||||    
T  30833962 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcactaattttttggtcgcaaaatttaatgacagaattagagag 30834061  T
Q  280 ggatttcacattttccctctctaaatttcc 309  Q
    |||||| || || |||||| ||||||||||    
T  30834062 ggattttacgttctccctcactaaatttcc 30834091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 181 - 313
Target Start/End: Complemental strand, 21141075 - 21140943
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| |||| ||||||   | ||||||||| |||||||| ||||||||||||    
T  21141075 tactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcccaaatttcatggtcgcaaaatttagtgacggaattagagagg 21140976  T
Q  281 gatttcacattttccctctctaaatttccctca 313  Q
    |||||||| ||||||||| | ||||||||||||    
T  21140975 gatttcacgttttccctcacaaaatttccctca 21140943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 6605498 - 6605621
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  ||||||||||||  ||||||| |||||||||||    
T  6605498 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttagtcgcaaaatatagtgacggaattagagag 6605597  T
Q  280 ggatttcacattttccctctctaa 303  Q
     |||||||  ||||||||| ||||    
T  6605598 agatttcatgttttccctcactaa 6605621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 9885380 - 9885253
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||  | ||| ||||| ||||| ||||||||||||||  |||||||||| ||| || |||||| ||||||||| ||||| ||||    
T  9885380 ctactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttgttggttgcaaaatttagtgacaaaattaaagag 9885281  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    ||||||||  ||||||||| ||||||||    
T  9885280 ggatttcatgttttccctcactaaattt 9885253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 28668237 - 28668114
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||||||||| |||||||||||||| |||||||||||| ||  |||||||| ||| |||| |||||||| ||    
T  28668237 ctactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaataaaattcctcacaaattccttgatcgcaaaatttaatgacggaattagaaag 28668138  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| ||| |||||||| ||||    
T  28668137 ggattttacaatttccctcactaa 28668114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 2669446 - 2669313
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||| | ||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  2669446 ctactagaaaaagcaaaattaacgagggaaattagtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 2669347  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | |||| || |||| || | ||||||||||||||    
T  2669346 gaattttacgtttttccacactaaatttccctca 2669313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 11049753 - 11049878
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  11049753 ctactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 11049852  T
Q  280 ggatttcacattttccctctctaaat 305  Q
     |||||||  ||||||||| ||||||    
T  11049853 agatttcatgttttccctcactaaat 11049878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 16250804 - 16250937
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||   |  |||||||| ||||||||||||||||||||    
T  16250804 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacagaattagagag 16250903  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||| ||||||||| | ||||||| ||||    
T  16250904 agatttcacgttttccctcacaaaatttctctca 16250937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 20182282 - 20182149
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   |  |||||||| |||||||| |||||||||||    
T  20182282 ctactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacggaattagagag 20182183  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | |||||| |||||    
T  20182182 ggatttcacgttttccctcacaaaatttgcctca 20182149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 21990177 - 21990309
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||| | |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  21990177 ctactagaaaaagcaaaattagcgagggaaattaatgacggaaaaa-tgaaattcctcacaaatttcttggtcgcaaaaattagtgacggaattagagag 21990275  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| |||||||| |||||    
T  21990276 ggattttacgttttccctcactaaattttcctca 21990309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 22153709 - 22153842
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   |  |||||||| |||||||| |||||||||||    
T  22153709 ctactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacggaattagagag 22153808  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | |||||| |||||    
T  22153809 ggatttcacgttttccctcacaaaatttgcctca 22153842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 185 - 309
Target Start/End: Complemental strand, 9060222 - 9060099
Alignment:
Q  185 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    |||||||||||||||  |||| ||||| ||||| |||||||||||||| |||||||||||  || ||||||||| ||||||||||||||||||||  |||    
T  9060222 agaaaaagcaaaattaaagagcgaaattagtgacggaaaaaataaaatccctcacaaattttttggtcgcaaaatttagtgacagaattagagagaaatt 9060123  T
Q  285 tcacattttccctctctaaatttcc 309  Q
    |||   |||||||| ||||||||||    
T  9060122 tca-tgtttccctcgctaaatttcc 9060099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 5192195 - 5192314
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||||||    
T  5192195 tagaaaaagcaaaattagcgaggaaaattagtgaaggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagagggat 5192294  T
Q  284 ttcacattttccctctctaa 303  Q
    || || ||||||||| ||||    
T  5192295 tttacgttttccctcactaa 5192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 11077785 - 11077663
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||||||||| |||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| | ||||||||||    
T  11077785 tactagaaaaagaaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggtattagagagg 11077686  T
Q  281 gatttcacattttccctctctaa 303  Q
    |||||||  ||||||||| ||||    
T  11077685 gatttcatgttttccctcactaa 11077663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 27705520 - 27705426
Alignment:
Q  219 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||||||||||| ||||||||| | ||||||||||||    
T  27705520 ggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctca 27705426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 1939244 - 1939377
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| |||||  |||||||| |||| |||||||||||  || ||||||||| ||| |||| |||||||||||    
T  1939244 ctactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcacaaattttttggtcgcaaaatttaatgacggaattagagag 1939343  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||| ||| || ||| |||||||    
T  1939344 ggatttcatgttttctctcactgaatatccctca 1939377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 14886698 - 14886565
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||| ||||||||||||||| | |||  |||| |||||  ||||||||||||| ||||||| |||| || |||| |||| |||||||| |||||||||||    
T  14886698 ctaccagaaaaagcaaaattagggaggaaaattagtgacagaaaaaataaaatccctcacatattctttggtcgtaaaatttagtgacggaattagagag 14886599  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| |  ||||||||| |||||||| |||||    
T  14886598 ggatttgatgttttccctcactaaattttcctca 14886565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 18033528 - 18033660
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| ||||| | |||| | |||||||||||| || ||||||||| |||||||| |||||||||||    
T  18033528 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaacattaaatt-cctcacaaattccttggtcgcaaaatttagtgacggaattagagag 18033626  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  |||||||||  |||||||||||||    
T  18033627 ggatttcatgttttccctcattaaatttccctca 18033660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 214 - 313
Target Start/End: Complemental strand, 5270496 - 5270396
Alignment:
Q  214 gtgatggaaaaaataaaatgcctcacaaattcgttag-tcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctc 312  Q
    |||||||||||||||||||  ||||||||||  || | ||| |||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  5270496 gtgatggaaaaaataaaatttctcacaaatttttttgatcgtaaaatttagtgacggaattagagaggaatttcacattttccctctctaaaattccctc 5270397  T
Q  313 a 313  Q
    |    
T  5270396 a 5270396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 14872255 - 14872133
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||| ||||| |||||| ||||| |||||  |||| |||||| ||||||| |||||||||||| || ||  ||||| |||||||| ||||||||||||    
T  14872255 tactaggaaaagaaaaattagagagggaaatttgtgacggaaaacataaaattcctcacaaattccttggttccaaaatttagtgacggaattagagagg 14872156  T
Q  281 gatttcacattttccctctctaa 303  Q
    |||||||  ||||||||| ||||    
T  14872155 gatttcatgttttccctcactaa 14872133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 343593 - 343698
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| | ||||||| |||| |||||||||||  || ||||||||  |||||||||||||||||||||||||| || |||||||||  |||||||    
T  343593 aaattagtgacgtaaaaaatgaaattcctcacaaattttttggtcgcaaattttagtgacagaattagagagggattttacgttttccctcattaaattt 343692  T
Q  308 ccctca 313  Q
    ||||||    
T  343693 ccctca 343698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 305
Target Start/End: Complemental strand, 26939724 - 26939599
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| ||||||   ||| ||||| |||||   ||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  26939724 ctactagaaaaagtaaaattactgagggaaattagtgacaaaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 26939625  T
Q  280 ggatttcacattttccctctctaaat 305  Q
    ||||||||  ||||||||| ||||||    
T  26939624 ggatttcatgttttccctcactaaat 26939599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 27796836 - 27796969
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| | ||||||| | ||  |||| |||||| ||  | |||||| |||||||| |||||||||||    
T  27796836 ctactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaatgatatttctcataaattccttgattgcaaaatttagtgacggaattagagag 27796935  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  27796936 ggatttcatgttttccctcactaaatatccctca 27796969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 33250710 - 33250835
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||  |||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  33250710 ctactagaaaagacaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 33250809  T
Q  280 ggatttcacattttccctctctaaat 305  Q
    | ||||||  ||||||||| ||||||    
T  33250810 gaatttcatgttttccctcactaaat 33250835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 219 - 303
Target Start/End: Complemental strand, 33547644 - 33547560
Alignment:
Q  219 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 303  Q
    |||||||||||||| |||||||||||| || ||||||||| ||||||||| ||||||| ||||||||||  ||||||||| ||||    
T  33547644 ggaaaaaataaaatccctcacaaattctttggtcgcaaaatttagtgacaaaattagatagggatttcatgttttccctcactaa 33547560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 188 - 287
Target Start/End: Complemental strand, 6978406 - 6978307
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| | ||| ||||| ||| | ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||| ||||||    
T  6978406 aaaagcaaaattagcgagggaaattagttacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaatttca 6978307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 182 - 313
Target Start/End: Original strand, 12157380 - 12157511
Alignment:
Q  182 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 281  Q
    ||||||||||||||||||   ||| ||||| ||||| |||||||||||||| ||| ||||| || || |||  |||| |||||||| ||||||||||  |    
T  12157380 actagaaaaagcaaaattaaggagggaaattagtgacggaaaaaataaaatcccttacaaaatctttggtcataaaatttagtgacggaattagagaatg 12157479  T
Q  282 atttcacattttccctctctaaatttccctca 313  Q
    |||||| |||||  |||||||||||| |||||    
T  12157480 atttcatatttttgctctctaaattttcctca 12157511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 208 - 303
Target Start/End: Complemental strand, 13145111 - 13145016
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 303  Q
    ||||||| || ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||| |||| |||||||| ||||||||| ||||    
T  13145111 aaatcagcgagggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaaagagagatttcacgttttccctcactaa 13145016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 287
Target Start/End: Complemental strand, 14772794 - 14772691
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | |||||||||  |||| | |||| ||||||| |||||||||||| || |||| |||| |||||||| ||||||||||| |||    
T  14772794 tagaaaaagcaaaattagggagagaaatttgtgacgaaaaacataaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagagagat 14772695  T
Q  284 ttca 287  Q
    ||||    
T  14772694 ttca 14772691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 12680213 - 12680319
Alignment:
Q  207 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 306  Q
    ||||| ||||| ||||||||||||||  ||||| ||||| ||  ||| |||| ||| |||| |||||||||||| ||||||| |||||||||||||||||    
T  12680213 gaaattagtgacggaaaaaataaaattgctcacgaattctttgatcgtaaaatttaatgacggaattagagaggaatttcacgttttccctctctaaatt 12680312  T
Q  307 tccctca 313  Q
    | |||||    
T  12680313 ttcctca 12680319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 18492503 - 18492389
Alignment:
Q  183 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    ||||||||||||||||| | ||   |||| ||||| ||||||||| ||||  |||||||||||  | ||||||||| |||||||| ||||||||| ||||    
T  18492503 ctagaaaaagcaaaattagcgatgcaaattagtgacggaaaaaatgaaatttctcacaaattccatggtcgcaaaatttagtgacggaattagagtggga 18492404  T
Q  283 tttcacattttccct 297  Q
    |||||| ||||||||    
T  18492403 tttcacgttttccct 18492389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 12205191 - 12205320
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    ||||||||| |||||| |  |||||||| ||||| |||||| || ||||  ||||||||||| | | ||| |||| |||||||| ||||||| |||||||    
T  12205191 tagaaaaagtaaaattaggaagagaaattagtgacggaaaacattaaatttctcacaaattcttaaatcgtaaaatttagtgacggaattagtgagggat 12205290  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    ||||| ||||||||||  |||||| |||||    
T  12205291 ttcacgttttccctcttaaaattttcctca 12205320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 22055622 - 22055747
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||| ||||||| ||||| ||||| | |||  ||||||||||||| ||||||||||||||| ||| ||||| | | |||  |||||||||||||||||||    
T  22055622 aaaaacaaaattagagagggaaattaatgacagaaaaaataaaattcctcacaaattcgttggtcacaaaattcaatgagggaattagagagggatttca 22055721  T
Q  288 cattttccctctctaaatttccctca 313  Q
      |||| |||| ||||| ||||||||    
T  22055722 tgtttttcctcactaaacttccctca 22055747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 303
Target Start/End: Complemental strand, 12499346 - 12499230
Alignment:
Q  187 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 286  Q
    ||||| ||||||| | ||| ||||  ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| || ||||||||||||||     
T  12499346 aaaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttt 12499247  T
Q  287 acattttccctctctaa 303  Q
    || ||||||||| ||||    
T  12499246 acgttttccctcactaa 12499230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 303
Target Start/End: Complemental strand, 12506675 - 12506559
Alignment:
Q  187 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 286  Q
    ||||| ||||||| | ||| ||||  ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| || ||||||||||||||     
T  12506675 aaaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttt 12506576  T
Q  287 acattttccctctctaa 303  Q
    || ||||||||| ||||    
T  12506575 acgttttccctcactaa 12506559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 303
Target Start/End: Original strand, 12509555 - 12509671
Alignment:
Q  187 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 286  Q
    ||||| ||||||| | ||| ||||  ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| || ||||||||||||||     
T  12509555 aaaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttt 12509654  T
Q  287 acattttccctctctaa 303  Q
    || ||||||||| ||||    
T  12509655 acgttttccctcactaa 12509671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 14036708 - 14036624
Alignment:
Q  229 aaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||| ||||||||||||  |  |||||||| ||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  14036708 aaattcctcacaaattccatgatcgcaaaatttaatgacagaattagagagggatttcacgttttccctcacaaaatttccctca 14036624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 15509293 - 15509185
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||| |||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | |||| |||| |||||||| |||||||||||    
T  15509293 ctaccagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcggaaaatttagtgacggaattagagag 15509194  T
Q  280 ggatttcac 288  Q
    |||||||||    
T  15509193 ggatttcac 15509185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 15961409 - 15961532
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| ||| |||||||  ||  |||||||| ||||| || |||||||||||    
T  15961409 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattccttacaaatttcttgatcgcaaaatttagtaacggaattagagag 15961508  T
Q  280 ggatttcacattttccctctctaa 303  Q
    | |||| || ||||||||| ||||    
T  15961509 gaattttacgttttccctcactaa 15961532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 11530354 - 11530229
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| | ||| |||||  |||| |||||| |||||||  |||| |||||  ||| ||| |||| |||||||| |||||||||| ||||||||    
T  11530354 aaaagcaaaattagggagggaaatttgtgacggaaaacataaaatttctcataaatttcttaatcgtaaaatttagtgacggaattagagatggatttca 11530255  T
Q  288 cattttccctctctaaatttccctca 313  Q
      ||||||||| |||||||| |||||    
T  11530254 tgttttccctcactaaattttcctca 11530229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 11431684 - 11431775
Alignment:
Q  221 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||  ||||||||||| ||| | |||||| |||||||| |||||| |||||||| || | |||| |||||||||||||||||||    
T  11431684 aaaaaataaaatctctcacaaattctttatt-gcaaaatttagtgacggaattaaagagggatatcgcgtttttcctctctaaatttccctca 11431775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 19175823 - 19175910
Alignment:
Q  224 aaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctc 312  Q
    |||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||| |||| |||||||||||| || ||||||||||    
T  19175823 aaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagaggaattttacattttccctcact-aatttccctc 19175910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 10458901 - 10458778
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| || | |||||||||||| || || |||||| |||||||  |||||| ||||    
T  10458901 ctactagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaatttcctcacaaattccttggttgcaaaatttagtgatggaattaaagag 10458802  T
Q  280 ggatttcacattttccctctctaa 303  Q
      |||| ||||||| |||| ||||    
T  10458801 aaattttacatttttcctcactaa 10458778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 303
Target Start/End: Complemental strand, 6065580 - 6065451
Alignment:
Q  174 cttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatt 273  Q
    ||||| ||| ||| |||||||||||| | |||  |||| | ||| ||||||||||||||  ||||||||||| ||  |||||||| ||| ||||| ||||    
T  6065580 cttacactattaggaaaagcaaaattagggaggaaaattaatgacggaaaaaataaaatctctcacaaattctttgatcgcaaaatttaatgacaaaatt 6065481  T
Q  274 agagagggatttcacattttccctctctaa 303  Q
    ||||||| |||||   ||||||||| ||||    
T  6065480 agagaggaatttcttgttttccctcactaa 6065451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 12160849 - 12160973
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| | ||||||| |||| |||||||||||  ||  ||| |||| ||||||||  ||||||||||    
T  12160849 ctactagaaaaagtaaaattagcgagggaaattagtgacgtaaaaaatgaaattcctcacaaattttttgatcg-aaaatttagtgacgaaattagagag 12160947  T
Q  280 ggatttcacattttccctctctaaat 305  Q
    |||||| |  ||||||||| ||||||    
T  12160948 ggattttatgttttccctcactaaat 12160973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 11350315 - 11350196
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||| |||||||||||| | ||| |||||  |||| |||||| | ||||    |||||||||| ||| |||||||| ||||||||||||||||||||     
T  11350315 tactaggaaaagcaaaattagggagggaaatttgtgacggaaaacaaaaaaa---tcacaaattccttaatcgcaaaatttagtgacagaattagagagc 11350219  T
Q  281 gatttcacattttccctctctaa 303  Q
    ||||| |  ||||||||| ||||    
T  11350218 gattttatgttttccctcactaa 11350196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 13251385 - 13251511
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| ||||||||||| ||||| | ||||| | |||| |||||  | ||   |  |||||||  | ||||||| ||||||||||||||    
T  13251385 tagaaaaagcaaaattagagagagaaattagtgacgaaaaaagtgaaattcctcagtagtttcctcatcgcaaatctcagtgacataattagagagggat 13251484  T
Q  284 ttcacattttccctctctaaatttccc 310  Q
    |||| | ||| |||| |||||||||||    
T  13251485 ttcataattttcctcgctaaatttccc 13251511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 7582200 - 7582148
Alignment:
Q  343 ttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||||| | ||||||||||| ||||||| ||||||||| ||||||    
T  7582200 ttcgattctctttattgtcaatttggatggactaatgtagcttcttgaaaaaa 7582148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 20213107 - 20213162
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| || |||| ||||||||| | | ||||||||||||||||||||||    
T  20213107 aggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaaaaa 20213162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 303
Target Start/End: Original strand, 20692841 - 20692936
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 303  Q
    |||| ||||| |||||||||||||| | | | || ||  || ||||||||| ||||||||  |||||||||||||||| || ||||||||| ||||    
T  20692841 aaattagtgacggaaaaaataaaattctttataagttttttggtcgcaaaatttagtgacgaaattagagagggattttacgttttccctcactaa 20692936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 22107130 - 22107185
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| || |||| ||||||||| | | ||||||||||||||||||||||    
T  22107130 aggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaaaaa 22107185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 307
Target Start/End: Original strand, 3673177 - 3673262
Alignment:
Q  222 aaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||||| |||| |||||||||||  || |||| |||| |||||||| ||||||||||   |||| ||||||| |||| ||||||||    
T  3673177 aaaaatgaaattcctcacaaattttttggtcgtaaaatttagtgacggaattagagaaaaattttacatttttcctcactaaattt 3673262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 13668085 - 13668125
Alignment:
Q  269 gaattagagagggatttcacattttccctctctaaatttcc 309  Q
    ||||||||| || ||||||| ||||||||||||||||||||    
T  13668085 gaattagaggggaatttcacgttttccctctctaaatttcc 13668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 19081865 - 19081732
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| |||||| |||||| ||||| ||||| ||||||||||||||||||||  ||||||||||| || |||| |||| ||||||||||||||||||||    
T  19081865 ctactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacagaattagagag 19081766  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||||||||| ||||||||    
T  19081765 ggatttcacgttttccctctctaaaattccctca 19081732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 19129753 - 19129620
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| |||||| |||||| ||||| ||||| ||||||||||||||||||||  ||||||||||| || |||| |||| ||||||||||||||||||||    
T  19129753 ctactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacagaattagagag 19129654  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||||||||| ||||||||    
T  19129653 ggatttcacgttttccctctctaaaattccctca 19129620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 38531172 - 38531305
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  |||||||||||    
T  38531172 ctactagaaaaagtaaaattagggagggaaataagtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttagtgatggaattagagag 38531271  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||| ||||||||||||||||||||||||    
T  38531272 agatttcacgttttccctctctaaatttccctca 38531305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 12720946 - 12720813
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||||||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  12720946 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 12720847  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  12720846 ggatttcatgttttccctcactaaatatccctca 12720813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 6459354 - 6459221
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||| ||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  6459354 ctactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 6459255  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  6459254 ggatttcatgttttccctcactaaatatccctca 6459221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 9109977 - 9110110
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  9109977 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 9110076  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  9110077 ggatttcatgttttccctcactaaatatccctca 9110110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 12989989 - 12989856
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| ||||||||||||| |||||||||||  |||| ||||||||||||||  ||||||||||| || ||||||||  |||||||| ||||||| |||    
T  12989989 ctactaaaaaaagcaaaattagagagagaaattggtgacggaaaaaataaaatttctcacaaattccttggtcgcaaagtttagtgactgaattagggag 12989890  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||| ||||||||||| ||||||||||||    
T  12989889 agatttcacgttttccctctcaaaatttccctca 12989856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 14761004 - 14760871
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||  |||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| ||||||| |||    
T  14761004 ctactagaaaaagcaaaattaaagagggaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagtgag 14760905  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  14760904 ggatttcatgttttccctcactaaatttccctca 14760871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 15243222 - 15243089
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||  | ||||||||| ||||| ||||||||| |||| |||||||||||| ||  |||||||| |||||||| |||||||| ||    
T  15243222 ctactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagatag 15243123  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| ||||||||||||||    
T  15243122 ggatttcacgttttccctcactaaatttccctca 15243089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 22603685 - 22603552
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  || ||||| ||||||||||||||| |||| |||||||||||| ||  |||||||| |||||||| |||||||||||    
T  22603685 ctactagaaaaagcaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcacaaattctttgatcgcaaaatttagtgacggaattagagag 22603586  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||||| || ||||||||| ||||||||||||||    
T  22603585 cgattttacgttttccctcactaaatttccctca 22603552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 29549555 - 29549422
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| | ||||||||||||  ||||||||||  |||||||| ||| |||||||| |||||||||||    
T  29549555 ctactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaataaaatttctcacaaattttttagtcgcgaaatttagtgacggaattagagag 29549456  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  29549455 ggattttacgttttccctcactaaatttccctca 29549422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 45839429 - 45839296
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  45839429 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 45839330  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  45839329 ggatttcatgttttccctcactaaatatccctca 45839296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 180 - 316
Target Start/End: Original strand, 46339447 - 46339583
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| |||||||||||| |||||||| |||||||||||    
T  46339447 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagag 46339546  T
Q  280 ggatttcacattttccctctctaaatttccctcatta 316  Q
     |||||||  ||||||||  |||||| ||||||||||    
T  46339547 agatttcatgttttcccttactaaatatccctcatta 46339583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 182 - 313
Target Start/End: Original strand, 16913581 - 16913712
Alignment:
Q  182 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 281  Q
    ||||| |||||||||||| |  || ||||| ||||| |||||||||||||| |||||||||||| ||||||| |||| ||| | || |||||||||||||    
T  16913581 actaggaaaagcaaaattaggaagggaaattagtgacggaaaaaataaaattcctcacaaattccttagtcgtaaaatttaataacggaattagagaggg 16913680  T
Q  282 atttcacattttccctctctaaatttccctca 313  Q
    ||||||  ||||||||||||||||||||||||    
T  16913681 atttcatgttttccctctctaaatttccctca 16913712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 41120743 - 41120866
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||||||    
T  41120743 tagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggat 41120842  T
Q  284 ttcacattttccctctctaaattt 307  Q
    || || ||||||||| ||||||||    
T  41120843 tttacgttttccctcactaaattt 41120866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 50845332 - 50845459
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  50845332 ctactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 50845431  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    ||||||||  ||||||||| ||||||||    
T  50845432 ggatttcatgttttccctcactaaattt 50845459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 13195720 - 13195587
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||| |||||||| | ||| || || ||||||||||||  |||||| |||||| ||||| |  | ||||||| ||||||||||||||||||||    
T  13195720 ctactagaaaatgcaaaattagggagggagattagtgatggaaaagttaaaattcctcacgaattcctgggacgcaaaatttagtgacagaattagagag 13195621  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||  ||||||||||||||||||||||||||    
T  13195620 ggattttgcattttccctctctaaatttccctca 13195587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 20408162 - 20408295
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| ||||| || |||||||||||    
T  20408162 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtaacggaattagagag 20408261  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  20408262 ggatttcacgttttccctcacaaaatttccctca 20408295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 41752570 - 41752437
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||  ||||| ||||| ||||||||||||||   |||||||||| || ||||||||| |||||||| |||||||||||    
T  41752570 ctactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaatttttcacaaattccttggtcgcaaaatttagtgacggaattagagag 41752471  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  41752470 ggatttcatgttttccctcactaaatatccctca 41752437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 52183815 - 52183682
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| | ||| |||||||||||||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  52183815 ctactagaaaaagcaaaattaacgagggaaattaatgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 52183716  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  52183715 ggatttcacgttttccctcacaaaatttccctca 52183682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 4340540 - 4340417
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||||||    
T  4340540 tagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggat 4340441  T
Q  284 ttcacattttccctctctaaattt 307  Q
    || || ||||||||| ||||||||    
T  4340440 tttacgttttccctcactaaattt 4340417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 28229457 - 28229580
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  28229457 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 28229556  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  28229557 ggattttacgttttccctcactaa 28229580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 6412055 - 6412188
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||| | ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||| ||||    
T  6412055 ctactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaaagag 6412154  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  6412155 ggatttcatgttttccctcactaaatatccctca 6412188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 17200012 - 17200145
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||||||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||| |||     
T  17200012 ctactagaaaaaacaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcacaaattcattggtcgcaaaatttagtgacggaattaaagaa 17200111  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | |||| | ||||| |||| ||||||||||||||    
T  17200112 gaattttatatttttcctcactaaatttccctca 17200145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 51973561 - 51973424
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||| | ||||||||| |||| ||||| ||| ||  | ||||||||| |||||||| |||||||||||    
T  51973561 ctactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcataaaatctatggtcgcaaaatttagtgacggaattagagag 51973462  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
      ||||||||||||||||| | ||||||||||||||||    
T  51973461 aaatttcacattttccctcacaaaatttccctcattaa 51973424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 185 - 313
Target Start/End: Complemental strand, 9464235 - 9464107
Alignment:
Q  185 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    |||||||| |||||| | ||  ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| ||||||||||||||||    
T  9464235 agaaaaagtaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatt 9464136  T
Q  285 tcacattttccctctctaaatttccctca 313  Q
    |||| ||||||||| | ||||||||||||    
T  9464135 tcacgttttccctcacaaaatttccctca 9464107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 13523000 - 13523096
Alignment:
Q  217 atggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||| |||  ||||||||||| || ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  13523000 atggaaaaaatataatttctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaaattccctca 13523096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 185 - 313
Target Start/End: Original strand, 18890556 - 18890684
Alignment:
Q  185 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    ||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||||||||||   | ||||||||| ||||| || ||||||||||||||||    
T  18890556 agaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaatttaatggtcgcaaaatttagtaacggaattagagagggatt 18890655  T
Q  285 tcacattttccctctctaaatttccctca 313  Q
    |||| ||||| ||| | ||||||||||||    
T  18890656 tcacgttttctctcacaaaatttccctca 18890684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 46790137 - 46790014
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||| |||| |||||||| ||    
T  46790137 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaatgacggaattagaaag 46790038  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  46790037 ggattttacgttttccctcactaa 46790014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 18894897 - 18895035
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| ||||||| |||||||||||| | |||  |||| ||||| | |||||||||||| ||||||| |||| || ||||||||| ||||||||  |||||    
T  18894897 ttacactactaggaaaagcaaaattagcgaggaaaattagtgacgaaaaaaataaaatacctcacatattctttggtcgcaaaatttagtgacgaaatta 18894996  T
Q  275 gagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||  ||||||||| |||||||| |||||    
T  18894997 gagagggatttcatgttttccctcactaaattttcctca 18895035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 20581047 - 20580913
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||| |||||| |||||| ||||| ||||| |||||||||||||| | ||||  ||||||||||| |||||||||||| ||| | ||  |||||||||    
T  20581047 ctactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaaattaaatttctcacaaattccttagtcgcaaaatttaattacgaaattagaga 20580948  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||| ||||||||||||||| ||| ||||    
T  20580947 gggatttcacgttttccctctctaaaattctctca 20580913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 41071864 - 41071970
Alignment:
Q  207 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 306  Q
    ||||| ||||| ||| ||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||||||||| || ||||||||| |||||||    
T  41071864 gaaattagtgacggagaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatt 41071963  T
Q  307 tccctca 313  Q
    |||||||    
T  41071964 tccctca 41071970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 7830168 - 7830035
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||   |||||||||| |||||||  ||||||||||| || ||||||||| ||||||||  |||||| |||    
T  7830168 ctactaggaaaagcaaaattagggagggaaatttatgatggaaaacataaaatttctcacaaattccttggtcgcaaaatttagtgacgaaattagggag 7830069  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  7830068 ggatttcatgttttccctcactaaatttccctca 7830035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 12161951 - 12161818
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | |||  |||| | ||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  12161951 ctactagaaaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 12161852  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  12161851 ggatttcacgttttccctcacaaaatttccctca 12161818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 22158939 - 22158806
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||| |||||||| |||||| | ||| ||||| |||||  |||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  22158939 ctaccagaaaaagtaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 22158840  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  22158839 ggatttcacgttttccctcacaaaatttccctca 22158806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 23458034 - 23457901
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | |||  |||| | ||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  23458034 ctactagaaaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 23457935  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  23457934 ggatttcacgttttccctcacaaaatttccctca 23457901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 46865380 - 46865247
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||| | | ||| ||||| ||||| |||||||||||||| |||||||||||  || | ||||||| ||||| |  |||||||||||    
T  46865380 ctactagaaaaagaaaaactagggagggaaattagtgacggaaaaaataaaatccctcacaaatttcttggccgcaaaatttagtaatggaattagagag 46865281  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| || ||||||||| |||||||||||    
T  46865280 ggatttcacgttctccctctctgaatttccctca 46865247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 19865381 - 19865258
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | |||  |||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| |||||||||||    
T  19865381 ctactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19865282  T
Q  280 ggatttcacattttccctctctaa 303  Q
    ||||||||  ||||||||| ||||    
T  19865281 ggatttcatgttttccctcactaa 19865258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 46785964 - 46786087
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||| ||| || ||||||||| ||| |||| |||||||||||||||    
T  46785964 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaagttccttggtcgcaaaatttaatgacggaattagagagggat 46786063  T
Q  284 ttcacattttccctctctaaattt 307  Q
    || || ||||||||| ||||||||    
T  46786064 tttacgttttccctcactaaattt 46786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 7181552 - 7181690
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| |||||||||||||||||||| |  || ||||| ||||| |||||||| ||||| ||||||| |||   | ||| ||||| |||||||| ||||||    
T  7181552 ttacactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaagaaaattcctcacatatttcatggtcacaaaatttagtgacggaatta 7181651  T
Q  275 gagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||| ||||||||  | ||||||||||||    
T  7181652 gagagggatttcacgttttcccttacaaaatttccctca 7181690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 25787999 - 25788105
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  |||| ||||| |||||||| ||||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  25787999 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaagaaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 25788098  T
Q  280 ggatttc 286  Q
    |||||||    
T  25788099 ggatttc 25788105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 9985329 - 9985462
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| ||| |||| |||||||||||    
T  9985329 ctactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatcaaattcctcacaaattctttggtcgtaaaatttattgacggaattagagag 9985428  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || |||| |||| | ||||||||||||    
T  9985429 ggattttacgtttttcctcacaaaatttccctca 9985462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 12174808 - 12174901
Alignment:
Q  220 gaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||| |||||||||||| || ||||||||| |||||||| |||||||||| ||||||||  ||||||||| |||||| |||||||    
T  12174808 gaaaaaataaaattcctcacaaattccttcgtcgcaaaatttagtgacggaattagagaaggatttcatgttttccctcactaaatatccctca 12174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 17661183 - 17661054
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    ||||||||||||||||   ||  ||||| ||||| |||||||||||||| |||||||||||   | ||||||||| |||||||  |||||||||||| ||    
T  17661183 tagaaaaagcaaaattaacgacggaaattagtgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgatggaattagagaggaat 17661084  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    ||||| ||||||||| | ||||||||||||    
T  17661083 ttcacgttttccctcacaaaatttccctca 17661054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 22789621 - 22789726
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| |||||| |||||||  |||||||||||  | ||||||||| |||||||| |||||||| || |||||||| ||||||||||||||||||    
T  22789621 aaattagtgacggaaaacataaaatttctcacaaattccatggtcgcaaaatttagtgactgaattagatagagatttcacgttttccctctctaaattt 22789720  T
Q  308 ccctca 313  Q
    ||||||    
T  22789721 ccctca 22789726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 317
Target Start/End: Complemental strand, 6776015 - 6775887
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||| || || |||||| ||||  || |||||||||||| |||| |    
T  6776015 aaaagcaaaattagagagggaaat-agtgatggaaaaaataaaatccctcacaaattctttggttgcaaaacttagcaacggaattagagaggaatttta 6775917  T
Q  288 cattttccctctctaaatttccctcattaa 317  Q
      ||||  ||| ||||||||| ||||||||    
T  6775916 agttttttctcactaaatttctctcattaa 6775887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 9259185 - 9259318
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| |||||||   |||  |||| ||||| |||||||| |||||  ||||||||||   | ||||||||| |||||||| |||||||||||    
T  9259185 ctactagaaaaaacaaaattaacgaggaaaattagtgacggaaaaaagaaaatttctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 9259284  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||| ||||||||| | ||||||||||||    
T  9259285 agatttcacgttttccctcacaaaatttccctca 9259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 13102453 - 13102320
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| ||||||||||||   ||| |||||  |||| |||||| ||||||| | |||||||||| || ||||||||| |||||||| |||||||| ||    
T  13102453 ctactaggaaaagcaaaattaaggagggaaatttgtgacggaaaacataaaattcatcacaaattccttggtcgcaaaatttagtgacggaattagaaag 13102354  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||||| |  ||||||||| ||||||||||||||    
T  13102353 agattttatgttttccctcactaaatttccctca 13102320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 29093596 - 29093689
Alignment:
Q  220 gaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||| |||||||| ||| ||| |||||||| ||| |||  |||||||||||| |||| ||||||||| |||||||||||||||||    
T  29093596 gaaaaaataaaattcctcacaagttccttaatcgcaaaatttaatgatggaattagagaggaattttacattttccatctctaaatttccctca 29093689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 30928388 - 30928513
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| ||||| ||||| ||||| ||||||||||||||  || |||||||| || ||||||||| ||||||| ||||||||||||  ||||||    
T  30928388 aaaagcaaaattagagagggaaattagtgacggaaaaaataaaatctctaacaaattccttggtcgcaaaatttagtgagagaattagagagaaatttca 30928487  T
Q  288 cattttccctctctaaatttccctca 313  Q
      ||||| |||  ||||||| |||||    
T  30928488 tgttttcactcagtaaattttcctca 30928513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 188 - 304
Target Start/End: Complemental strand, 11917914 - 11917799
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    ||||| |||||| ||||| ||||||||||| | |||||| |||||  ||||||||||  || ||||||||| |||||||| |||||||| ||||| ||||    
T  11917914 aaaagaaaaattagagagggaaatcagtgacg-aaaaaacaaaatatctcacaaattatttggtcgcaaaatttagtgacggaattagaaagggagttca 11917816  T
Q  288 cattttccctctctaaa 304  Q
    | |||||||||||||||    
T  11917815 cgttttccctctctaaa 11917799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 50092300 - 50092428
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   |  || ||||| |||||||| |||||||||||    
T  50092300 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcacaaaatttagtgacggaattagagag 50092399  T
Q  280 ggatttcacattttccctctctaaatttc 308  Q
    ||||||||  ||||||||| | |||||||    
T  50092400 ggatttcatgttttccctcacaaaatttc 50092428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 8940996 - 8941119
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| ||  ||| |||| |||| ||| |||||||||||    
T  8940996 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttgatcgtaaaatttagcgacggaattagagag 8941095  T
Q  280 ggatttcacattttccctctctaa 303  Q
    | |||| || ||||||||| ||||    
T  8941096 gaattttacgttttccctcactaa 8941119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 9177237 - 9177110
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| ||| | ||||||||| |||| |||||||||||  || ||||||||| ||||||||  ||||| ||||    
T  9177237 ctactagaaaaaacaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacgaaattaaagag 9177138  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || |||| |||| ||||||||    
T  9177137 ggattttacgtttttcctcactaaattt 9177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 208 - 311
Target Start/End: Complemental strand, 26825349 - 26825246
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| |||||||||||  | |||||||||||| ||  ||| |||| |||||||| |||||||||||| ||||||| ||||||||||||||| ||    
T  26825349 aaattagtgacggaaaaaataacttccctcacaaattctttgatcgtaaaatttagtgacggaattagagaggaatttcacgttttccctctctaaaatt 26825250  T
Q  308 ccct 311  Q
    ||||    
T  26825249 ccct 26825246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 32046985 - 32046880
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||| | ||||||||||| ||||| || ||||||||| ||| ||||    
T  32046985 aaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgtcggaattagagagagattttacgttttccctcactatattt 32046886  T
Q  308 ccctca 313  Q
    ||||||    
T  32046885 ccctca 32046880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 48522655 - 48522522
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  |||| |||||  |||||||||||||  ||||||||||  || ||||||||| |||||||| |||||  ||||    
T  48522655 ctactagaaaaagcaaaattagcgaggaaaattagtgacagaaaaaataaaatttctcacaaattttttggtcgcaaaatttagtgacggaatttaagag 48522556  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | ||||||  ||||||||| ||| || |||||||    
T  48522555 gaatttcatgttttccctcactacatatccctca 48522522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 41359092 - 41359020
Alignment:
Q  213 agtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggattt 285  Q
    ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||||||||    
T  41359092 agtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggattt 41359020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 13308822 - 13308929
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||| ||||||| ||||| ||||| ||||   ||||||||||||| |||||||||||  || ||||||||| |||||||   ||||||||||    
T  13308822 ctactaggaaaaacaaaattagagagggaaattagtgtccgaaaaaataaaattcctcacaaatttattggtcgcaaaatttagtgatgaaattagagag 13308921  T
Q  280 ggatttca 287  Q
    ||||||||    
T  13308922 ggatttca 13308929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 41063306 - 41063201
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| |||||||||||||| ||||||| |||| ||  |||||||| |||||||| ||||||||||| ||||| |  |||| |||| ||||||||    
T  41063306 aaattagtgacggaaaaaataaaatccctcacatattctttgatcgcaaaatttagtgacggaattagagagagattttatgtttttcctcactaaattt 41063207  T
Q  308 ccctca 313  Q
     |||||    
T  41063206 tcctca 41063201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 14486705 - 14486767
Alignment:
Q  251 tcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||| | |||||| ||||||||||| |||||||| |||||||||||||||||| |||||    
T  14486705 tcgcaaaattcagtgacggaattagagagagatttcacgttttccctctctaaattttcctca 14486767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 313
Target Start/End: Original strand, 16258527 - 16258621
Alignment:
Q  219 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||| ||||||||  |||||| |||| || || |||||| |||||||| |||||| |||||| |||||| |||| ||||||||||||| |||||    
T  16258527 ggaaagaataaaatatctcacagattccttggttgcaaaatttagtgacggaattatagagggttttcacgtttttcctctctaaattttcctca 16258621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 17733955 - 17734089
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgc-aaaagttagtgacagaattagaga 278  Q
    ||||||| |||||||||||| | |||| || | ||||| |||||| |||||||  ||||||||||  || ||||| |||| ||| |||  ||||||| ||    
T  17733955 ctactaggaaaagcaaaattagggagaaaatttagtgacggaaaagataaaatctctcacaaatttcttggtcgcaaaaatttaatgatggaattagcga 17734054  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    | |||||||  ||||||||| ||||||||||||||    
T  17734055 gagatttcatgttttccctcactaaatttccctca 17734089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 18787915 - 18788045
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||| |||||||||||||| | ||  ||||| ||||| | |||||||||||| ||||  |||||  || ||||||||| |||||||||  ||||||||     
T  18787915 ctacttgaaaaagcaaaattagggatggaaattagtgacg-aaaaaataaaatccctcctaaattttttggtcgcaaaatttagtgaca--attagagat 18788011  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||| |||| |||||||||| |||||||||||||    
T  18788012 tgatgtcacgttttccctctttaaatttccctca 18788045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 278
Target Start/End: Original strand, 27253857 - 27253955
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    ||||||||||||| |||||| | |||  |||| | ||| ||||||||||||||  |||||||||||  | ||||||||| |||||||| ||||||||||    
T  27253857 ctactagaaaaagaaaaattagggaggaaaattaatgacggaaaaaataaaatttctcacaaattccatggtcgcaaaatttagtgacggaattagaga 27253955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 1600302 - 1600247
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||||| | || ||||||||||| |||||| |||||||||||||||||    
T  1600302 aggttcgattctctctggtgtcaatttggatggactaacttagcttcttcaaaaaa 1600247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 316
Target Start/End: Complemental strand, 3786447 - 3786401
Alignment:
Q  270 aattagagagggatttcacattttccctctctaaatttccctcatta 316  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  3786447 aattagagaggaatttcacattttccctctctaaaattcccttatta 3786401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 240 - 313
Target Start/End: Original strand, 12370003 - 12370076
Alignment:
Q  240 aaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| |||||||| |||||||||| |||||| |  ||||||||  ||||||||||||||    
T  12370003 aaattctttggtcgcaaaatttagtgacggaattagagaaggattttatgttttcccttactaaatttccctca 12370076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 45918947 - 45919011
Alignment:
Q  221 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggattt 285  Q
    ||||||| |||| ||||| |||||| || || |||||| ||||| ||||||||||||||||||||    
T  45918947 aaaaaatgaaatccctcataaattccttggttgcaaaatttagtaacagaattagagagggattt 45919011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 6122860 - 6122915
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| || |||| ||||||||| | | ||||||||||||||||||||||    
T  6122860 aggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaaaaa 6122915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 9882070 - 9882144
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggattt 285  Q
    |||| ||||| |||||||||||||| ||||||||||   ||  |||||||| |||||||| |||||||||||| ||||    
T  9882070 aaattagtgacggaaaaaataaaatccctcacaaat---ttcttcgcaaaatttagtgacggaattagagaggaattt 9882144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 44961831 - 44961886
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||||| |||| ||||||||| | | ||||||||||||||| ||||||    
T  44961831 aggttcgattctctctagtgtcaatttgggtgggctaatttagcttcttaaaaaaa 44961886  T

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Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 26264350 - 26264296
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaa 394  Q
    |||||| ||||||||| || ||||||||||| ||||||||||| ||||| |||||    
T  26264350 aggttcaattctctttggtgtcaatttggatggactaatttagtttcttaaaaaa 26264296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 311
Target Start/End: Complemental strand, 39040898 - 39040860
Alignment:
Q  273 tagagagggatttcacattttccctctctaaatttccct 311  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  39040898 tagagagggatttcacgttttccctctctaaaattccct 39040860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 49881148 - 49881074
Alignment:
Q  213 agtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    ||||| ||||||||||||||   ||| |||||| || ||| ||||| ||||| |||| |||||||||||||||||    
T  49881148 agtgacggaaaaaataaaatctttcataaattccttggtcacaaaatttagtaacaggattagagagggatttca 49881074  T

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Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 7219928 - 7219875
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaa 393  Q
    ||||||||||||||||  || |||||| | | ||||||||||||||||||||||    
T  7219928 aggttcgattctctttgataccaatttaggtggactaatttagcttcttcaaaa 7219875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 52621263 - 52621158
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||||||||||||||||||  |||| |||||  ||||||  |||| |||||||  ||||||| || | ||||||  |||| |||| ||||||||    
T  52621263 aaattagtgatggaaaaaataaaatctctcataaattatttagtcataaaatttagtgatggaattagtgaagaatttcatgtttttcctcactaaattt 52621164  T
Q  308 ccctca 313  Q
     |||||    
T  52621163 tcctca 52621158  T

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Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 30673556 - 30673504
Alignment:
Q  255 aaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| | ||||||||||||||||||||  ||||||||| ||||||||    
T  30673556 aaaatttagtaatagaattagagagggatttcatgttttccctcactaaattt 30673504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 45485869 - 45485817
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaa 394  Q
    |||||||||||||| ||| |||||| | || |||||||||||||||| |||||    
T  45485869 gttcgattctctttcgtaccaatttaggtatactaatttagcttctttaaaaa 45485817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 52029989 - 52029949
Alignment:
Q  135 tattgatttgggacttaggagtgtgctccttctcaaggtct 175  Q
    |||||| ||| ||| ||||||||||||||||||||||||||    
T  52029989 tattgacttgagacctaggagtgtgctccttctcaaggtct 52029949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 174 - 313
Target Start/End: Original strand, 13788051 - 13788190
Alignment:
Q  174 cttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatt 273  Q
    ||||| |||||||||||||||||||| | ||| ||||||||||| ||||||||| |||| |||||||||||| || ||||||||| ||||||||  ||||    
T  13788051 cttacactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgaaatt 13788150  T
Q  274 agagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||| |||||||||||| |||||||| |||||    
T  13788151 agagagggattttacattttccctcactaaattttcctca 13788190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 44723065 - 44722932
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| | ||||||||||||| |||| ||| |||||||| |||||||||||| |||||||| |||||||||||    
T  44723065 ctactagaaaaagcaaaattagcgagggaaattaatgatggaaaaaatgaaattccttacaaattccttagtcgcaaaatttagtgacggaattagagag 44722966  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||||| |||||| ||| |||||| |||||||    
T  44722965 ggatttcatattttctctcactaaatatccctca 44722932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 180 - 312
Target Start/End: Original strand, 28319581 - 28319713
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  28319581 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 28319680  T
Q  280 ggatttcacattttccctctctaaatttccctc 312  Q
    ||||||||| ||||||||| | |||||||||||    
T  28319681 ggatttcacgttttccctcacaaaatttccctc 28319713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 37552360 - 37552233
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||| |||| |||||||||||    
T  37552360 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaatgacggaattagagag 37552261  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| |||||||||||| ||||||||    
T  37552260 ggattttacattttccctcactaaattt 37552233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 41637751 - 41637618
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  41637751 ctactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 41637652  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||||| |||||    
T  41637651 ggatttcatgttttccctcactaaattttcctca 41637618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 41736305 - 41736172
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| ||  |||||||| ||||||||  ||||||||||    
T  41736305 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacgaaattagagag 41736206  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| |||||||||||| |||||||| |||||    
T  41736205 ggattttacattttccctcactaaattttcctca 41736172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 185 - 313
Target Start/End: Complemental strand, 1141664 - 1141536
Alignment:
Q  185 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    ||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||||||||||||||||||||    
T  1141664 agaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacagaattagagagggatt 1141565  T
Q  285 tcacattttccctctctaaatttccctca 313  Q
    |||| ||||||||| | ||||||||||||    
T  1141564 tcacgttttccctcacaaaatttccctca 1141536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 185 - 313
Target Start/End: Complemental strand, 32300579 - 32300451
Alignment:
Q  185 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    ||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| ||||||||||||||||    
T  32300579 agaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatt 32300480  T
Q  285 tcacattttccctctctaaatttccctca 313  Q
    |||| ||||||||| | ||||||||||||    
T  32300479 tcacgttttccctcacaaaatttccctca 32300451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 20065076 - 20065209
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  20065076 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgactgaattagagag 20065175  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| |||| |||| | ||||||||||||    
T  20065176 ggatttcacgtttttcctcacaaaatttccctca 20065209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 27327749 - 27327612
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||  |||||  |||| |||||| ||||||| |||||||||||| |||| ||||||| |||||||| |||||| ||||    
T  27327749 ctactaggaaaagcaaaattagggatggaaatttgtgacggaaaacataaaattcctcacaaattccttagacgcaaaatttagtgacggaattaaagag 27327650  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
    ||||||||  ||||||||| ||||||||||||||||||    
T  27327649 ggatttcatgttttccctcactaaatttccctcattaa 27327612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 30783471 - 30783338
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| |  || |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  30783471 ctactaggaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattcctcacaaattcattggtcgcaaaatttagtgacggaattagagag 30783372  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  30783371 ggatttcatgttttccctcactaaatttccctca 30783338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 12779733 - 12779606
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||||||||  ||||||||||    
T  12779733 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattcattggtcgcaaaatttagtgacgaaattagagag 12779634  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    | |||| || ||||||||| ||||||||    
T  12779633 gaattttacgttttccctcactaaattt 12779606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 43408513 - 43408636
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  43408513 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 43408612  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  43408613 ggattttacgttttccctcactaa 43408636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 32009086 - 32008952
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||||||||||||||||| | |||  |||| ||||| |||||||| | |||| |||||||||||| || ||||||||| |||||||| ||||||||||    
T  32009086 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaga 32008987  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    ||||||| || |||||||||  |||||||||||||    
T  32008986 gggattttacgttttccctcattaaatttccctca 32008952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 15636737 - 15636870
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||| ||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| ||||||||  ||||||||||    
T  15636737 ctaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacgaaattagagag 15636836  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  15636837 ggatttcacgttttccctcacaaaatttccctca 15636870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 18551255 - 18551388
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| ||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| ||| |||||||| |||||||| |||||||||||    
T  18551255 ctactaaaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttaatcgcaaaatttagtgacggaattagagag 18551354  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| |  ||||||||| |||||| |||||||    
T  18551355 ggattttatgttttccctcactaaatatccctca 18551388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 22140366 - 22140499
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  22140366 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 22140465  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| |||||  || | ||||||||||||    
T  22140466 ggatttcacgttttctttcacaaaatttccctca 22140499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 28841344 - 28841477
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| ||||| ||| | ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  28841344 ctactaggaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 28841443  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||| | |||||| |||||||    
T  28841444 ggatttcatgttttcccacactaaatatccctca 28841477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 181 - 313
Target Start/End: Complemental strand, 28262496 - 28262364
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||||||||| |||||| |  || ||||| ||||||||||||||| |||| |||||||||||   | ||| ||||| |||||||| ||||||||||||    
T  28262496 tactagaaaaagtaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcacaaatttcatggtcacaaaatttagtgacggaattagagagg 28262397  T
Q  281 gatttcacattttccctctctaaatttccctca 313  Q
    |||||||| ||||||||| | ||||||||||||    
T  28262396 gatttcacgttttccctcacaaaatttccctca 28262364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 7093701 - 7093578
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| ||||||||| ||||||||||    
T  7093701 ctactagtaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacaaaattagagag 7093602  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  7093601 ggattttacgttttccctcactaa 7093578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 31266448 - 31266354
Alignment:
Q  219 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||||||||||  ||||||||| ||||||||||||||    
T  31266448 ggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcgctaaatttccctca 31266354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 183 - 313
Target Start/End: Original strand, 37723997 - 37724127
Alignment:
Q  183 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    |||||||||| |||||  | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| | ||||| ||||||    
T  37723997 ctagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggtattagcgaggga 37724096  T
Q  283 tttcacattttccctctctaaatttccctca 313  Q
    |||||| ||||||||| ||||||||| ||||    
T  37724097 tttcacgttttccctcactaaatttctctca 37724127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 2556228 - 2556095
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| |||||| |||||| |||||  |||| ||||||||||||||||||||  ||||||||||  || || | |||| |||||||| ||||||||||     
T  2556228 ctactaaaaaaagtaaaattagagaggaaaattagtgatggaaaaaataaaatttctcacaaatttcttggttgtaaaatttagtgacggaattagagaa 2556129  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
      ||||||||||||||||||||||| ||||||||    
T  2556128 aaatttcacattttccctctctaaaattccctca 2556095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 8430429 - 8430296
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | | | ||||| ||||| |||||||||||||| |||||||||||   |  ||| |||| |||||||| |||||||||||    
T  8430429 ctactagaaaaaacaaaattagcgggggaaattagtgacggaaaaaataaaattcctcacaaattttatgatcgtaaaatttagtgacggaattagagag 8430330  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  8430329 ggatttcacgttttccctcacaaaatttccctca 8430296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 21293713 - 21293846
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| ||||  |||||||||||  | |||| |||| |||||||| |||||||||||    
T  21293713 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccatggtcgtaaaatttagtgacggaattagagag 21293812  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||| ||||||||| | ||||||||||||    
T  21293813 agatttcacgttttccctcacaaaatttccctca 21293846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 23388380 - 23388513
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| |||||  |||| ||||||||| |||| | |||||||||   | ||||||||| |||||||| |||||||||||    
T  23388380 ctactagaaaaaacaaaattagcgagggaaattggtgacggaaaaaatgaaattcttcacaaatttcatggtcgcaaaatttagtgacggaattagagag 23388479  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  23388480 ggatttcacgttttccctcacaaaatttccctca 23388513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 29749405 - 29749538
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  || |||||  |||| |||||| ||||||| |||||||||||  || ||||||||| |||||||| ||||||| |||    
T  29749405 ctactagaaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagggag 29749504  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||||| |||||    
T  29749505 ggatttcatgttttccctcactaaattttcctca 29749538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 32185965 - 32185832
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| |||| ||||||   | |||| |||| |||||||| |||||||||||    
T  32185965 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcgcaaatttcatggtcgtaaaatttagtgacggaattagagag 32185866  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  32185865 ggatttcacgttttccctcacaaaatttccctca 32185832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 13613095 - 13613226
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||| ||||||| |||||| | |||  |||| ||||| | ||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  13613095 ctactggaaaaagaaaaattagcgaggaaaattagtgacgaaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 13613194  T
Q  280 ggatttcacattttccctctctaaatttccct 311  Q
    |||||| || ||||||||| ||||| ||||||    
T  13613195 ggattttacgttttccctcactaaacttccct 13613226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 295
Target Start/End: Original strand, 44476377 - 44476492
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| | |||||||||| || ||||||||| |||||||| |||||||||||    
T  44476377 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcttcacaaattccttggtcgcaaaatttagtgacggaattagagag 44476476  T
Q  280 ggatttcacattttcc 295  Q
     ||||| || ||||||    
T  44476477 agattttacgttttcc 44476492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 175 - 305
Target Start/End: Complemental strand, 36550973 - 36550844
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| |||||||||||| ||||||| ||||| ||||| ||||||||||||||| |||| |||||||| ||  || ||||||||| |||||||  ||||||    
T  36550973 ttacactactagaaaaaacaaaattagagagggaaattagtgatggaaaaaat-aaatccctcacaagttatttggtcgcaaaatttagtgatggaatta 36550875  T
Q  275 gagagggatttcacattttccctctctaaat 305  Q
     ||||||||||||  ||||||||| ||||||    
T  36550874 tagagggatttcatgttttccctcactaaat 36550844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 23857960 - 23858086
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| || |||| | |||| |||||||||||| || ||||||||| |||||||| ||||||||||     
T  23857960 ctactagaaaaagcaaaattagcgagggaaattagtgacgggaaaa-tgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaa 23858058  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
     ||||| || ||||||||| ||||||||    
T  23858059 tgattttacgttttccctcactaaattt 23858086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 40018935 - 40018808
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| |||||||  | || ||||| ||||| ||||||||||||||  || ||||||||||| || |||||| | ||||| ||||||||||||    
T  40018935 ctactagaaaaaacaaaattaaaaagggaaattagtgacggaaaaaataaaatttcttacaaattcgttggttgcaaaattcagtgagagaattagagag 40018836  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
     |||||||  ||||||||| ||||||||    
T  40018835 agatttcatgttttccctcactaaattt 40018808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 14757123 - 14757248
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||   |||| | ||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  14757123 ctactagaaaaagcaaaattagcgaagaaaattaatgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 14757222  T
Q  280 ggatttcacattttccctctctaaat 305  Q
     |||||||  ||||||||| ||||||    
T  14757223 agatttcatgttttccctcactaaat 14757248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 273
Target Start/End: Original strand, 27039910 - 27040003
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatt 273  Q
    |||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||    
T  27039910 ctactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 27040003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 37802381 - 37802513
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | |||||||||   ||| ||||||||||||||  ||| ||| ||  || ||||||||| |||||||| ||||||||||     
T  37802381 ctactaggaaaagcaaaattagggagagaaattgatgacggaaaaaataaaatctctcgcaatttt-ttggtcgcaaaatttagtgacggaattagagac 37802479  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||||| || ||||||||||||||||||||||||    
T  37802480 tgattttacgttttccctctctaaatttccctca 37802513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 183 - 303
Target Start/End: Original strand, 38362276 - 38362396
Alignment:
Q  183 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    ||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| | ||||||||||||||| | |||    
T  38362276 ctagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgtaaaattaagtgacagaattagaaaagga 38362375  T
Q  283 tttcacattttccctctctaa 303  Q
    ||| || ||||||||| ||||    
T  38362376 ttttacgttttccctcgctaa 38362396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 222 - 313
Target Start/End: Original strand, 18916444 - 18916535
Alignment:
Q  222 aaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||| |||||||||||  ||  |||||||| |||||||| |||||||||||||||||||  ||||||||| ||||||||| ||||    
T  18916444 aaaaataaaatccctcacaaattttttgatcgcaaaatttagtgactgaattagagagggatttcatgttttccctccctaaatttctctca 18916535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 26243323 - 26243446
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||  || ||||||||||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  26243323 ctactagaaaaagcaaaattaacgagggaaattagtggcggtaaaaataaaattcctcacaaattcattggtcgtaaaatttagtgacggaattagagag 26243422  T
Q  280 ggatttcacattttccctctctaa 303  Q
    | |||| || |||| |||| ||||    
T  26243423 gaattttacgtttttcctcactaa 26243446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 44366007 - 44366132
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||| ||||||| ||||| ||||| | |||  ||||||||||||| ||||||||||||||| ||| ||||| | | |||  |||||||||||||||||||    
T  44366007 aaaaacaaaattagagagggaaattaatgacagaaaaaataaaattcctcacaaattcgttggtcacaaaattcaatgagggaattagagagggatttca 44366106  T
Q  288 cattttccctctctaaatttccctca 313  Q
      |||| |||| ||||| ||||||||    
T  44366107 tgtttttcctcactaaacttccctca 44366132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 13134649 - 13134749
Alignment:
Q  207 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 306  Q
    ||||| ||||| |||||||||||||| |||||||| ||  ||||||| |||| ||| ||||| ||||||| ||||||||||  |||||| ||||||||||    
T  13134649 gaaattagtgacggaaaaaataaaatccctcacaatttttttagtcgtaaaatttattgacaaaattagaaagggatttcaagttttccatctctaaatt 13134748  T
Q  307 t 307  Q
    |    
T  13134749 t 13134749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 26687692 - 26687826
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaa-aataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||||| |||||||||||   ||| ||||| | ||| |||||| ||||||||  ||||||||||| || || |||||| |||||||| ||||||||||    
T  26687692 ctactagataaagcaaaattaaggagggaaattaatgacggaaaaaaataaaatttctcacaaattccttggttgcaaaatttagtgacggaattagaga 26687791  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
     ||||||||  |||||| || ||||||||| ||||    
T  26687792 tggatttcatgttttccgtcactaaatttcgctca 26687826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 27523084 - 27523011
Alignment:
Q  240 aaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| |||||||| |||||||||||||||||||  ||||||||| |||||| |||||||    
T  27523084 aaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctca 27523011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 36373992 - 36373900
Alignment:
Q  219 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||| |||| ||||||| ||  ||| |||| |||||||| |||||  ||||| ||||||||||||||||| |||||||| |||||    
T  36373992 ggaaaaaataaaatccctctcaaattccttgatcgtaaaatttagtgactgaatt--agaggaatttcacattttccctcactaaattttcctca 36373900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 9004343 - 9004443
Alignment:
Q  213 agtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctc 312  Q
    ||||| |||| |||| ||||  |||| |||||| |||||  ||||| |||||||  |||||||||||  |||| |||||||||||| |||||||||||||    
T  9004343 agtgacggaagaaatgaaatttctcataaattccttagttacaaaatttagtgatggaattagagagaaattttacattttccctcactaaatttccctc 9004442  T
Q  313 a 313  Q
    |    
T  9004443 a 9004443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 22192312 - 22192248
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaatt 244  Q
    |||||||||||||||||||  | ||||||||| ||||| ||||||||||||||  ||||||||||    
T  22192312 ctactagaaaaagcaaaatcagggagagaaattagtgacggaaaaaataaaatctctcacaaatt 22192248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 35697549 - 35697481
Alignment:
Q  219 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    ||||||||||||||  ||||||||||  || ||||||||| |||||||| |||||||||||| ||||||    
T  35697549 ggaaaaaataaaatctctcacaaattttttggtcgcaaaatttagtgacggaattagagaggaatttca 35697481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 313
Target Start/End: Original strand, 27058404 - 27058451
Alignment:
Q  266 acagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||||    
T  27058404 acagaattagagagggattttacgttttccctcactaaatttccctca 27058451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 313
Target Start/End: Original strand, 16098996 - 16099039
Alignment:
Q  270 aattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||||||||  |||||||||||||| ||||||||    
T  16098996 aattagagagggatttcacgctttccctctctaaaattccctca 16099039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 21195686 - 21195631
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| || |||| ||||||||||| | ||||||||||||||| ||||||    
T  21195686 aggttcgattccctctagtgtcaatttggatgggctaatttagcttcttaaaaaaa 21195631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 31966555 - 31966633
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||| ||||| |||||||||||||| ||| | |||||| || ||||||||| ||||| ||| |||||||||| |||||||    
T  31966555 aaattagtgacggaaaaaataaaatccct-ataaattccttggtcgcaaaatttagtaacataattagagagagatttca 31966633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 33582039 - 33582094
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||||| || | ||||||| | | ||||||||||||||||||||||||    
T  33582039 aggttcgattctctctaatgtcaatttaggtggactaatttagcttcttcaaaaaa 33582094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 9590532 - 9590470
Alignment:
Q  251 tcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||| ||||| ||| |||||||||| |||||||| ||||  ||| ||||||||||||||    
T  9590532 tcgcaaaatttagtaacaaaattagagagcgatttcacgtttttgctcgctaaatttccctca 9590470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 18609619 - 18609517
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| ||| |||||| ||| |||||||||||| ||  |||||||| || || |   ||||||||||| ||||||  ||||||||| ||||||||    
T  18609619 aaattagtgacggagaaaatagaatccctcacaaattccttgatcgcaaaattttgtcatgaaattagagaggtatttcatgttttccctcactaaattt 18609520  T
Q  308 ccc 310  Q
    |||    
T  18609519 ccc 18609517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 1435131 - 1435184
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||| | || ||||||||| | | ||||||||||||||||||||||    
T  1435131 gttcgattctctctggtgtcaatttgggtgggctaatttagcttcttcaaaaaa 1435184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 8763757 - 8763640
Alignment:
Q  190 aagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcaca 289  Q
    |||||||||| | |||| || | ||||| ||||||||||||||  | ||||||||| ||  ||  |||| ||| |||| |||||||||| ||||||||      
T  8763757 aagcaaaattagggagaaaagttagtgacggaaaaaataaaatctcgcacaaattccttgatcataaaatttaatgacggaattagagatggatttcatg 8763658  T
Q  290 ttttccctctctaaattt 307  Q
    |||||| || ||||||||    
T  8763657 ttttccttcactaaattt 8763640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 5e-36; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 17103867 - 17104000
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| |||||||||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  17103867 ctactagaaaaaacaaaattagagagagaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 17103966  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  17103967 ggatttcatgttttccctcactaaatttccctca 17104000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 17824618 - 17824751
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| ||||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  17824618 ctactagaaaaagcaaaattagagagggaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 17824717  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  17824718 ggatttcatgttttccctcactaaatttccctca 17824751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 9915042 - 9915175
Alignment:
Q  179 gctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    ||||||||||||||||||||| | ||||||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||||| ||||||||    
T  9915042 gctactagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccat-gtcgcaaaatttagtgacaggattagaga 9915140  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||| ||||||||| | ||||||||||||    
T  9915141 gggatttcacgttttccctcacaaaatttccctca 9915175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 8824960 - 8824837
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||||||||||||| |||| ||||||| |||| |||||||||||| |||||||| |||||||||||    
T  8824960 ctactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatcaaattcctcacagattccttagtcgcaaaatttagtgacggaattagagag 8824861  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| ||||||| |||| ||||    
T  8824860 ggattttacatttttcctcactaa 8824837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 30688071 - 30687944
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| |||||||||||  |||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  30688071 ctactagaaaaagcaaaattagcgagggaaatcagtgaccgaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 30687972  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| ||||||||| || ||||||||    
T  30687971 ggattttacattttccttcactaaattt 30687944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 175 - 305
Target Start/End: Complemental strand, 27869378 - 27869248
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| |||||||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||    
T  27869378 ttacactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatta 27869279  T
Q  275 gagagggatttcacattttccctctctaaat 305  Q
    ||||| |||||||  ||||||||| ||||||    
T  27869278 gagagagatttcatgttttccctcactaaat 27869248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 3823264 - 3823135
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| |||||||||||||||    
T  3823264 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattctttggtcgcaaaatttagtgacggaattagagagggat 3823165  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    || || ||||||||| ||||||||||||||    
T  3823164 tttacgttttccctcactaaatttccctca 3823135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 4331113 - 4330980
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  4331113 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 4331014  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | ||||||| ||||||||| | ||||||||||||    
T  4331013 gaatttcacgttttccctcacaaaatttccctca 4330980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 4647757 - 4647890
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   ||||||||||| |||||||| |||||||||||    
T  4647757 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatagtcgcaaaatttagtgacggaattagagag 4647856  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||||||||| | ||||||| ||||    
T  4647857 ggatttcacattttccctcacaaaatttctctca 4647890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 8555306 - 8555439
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  8555306 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 8555405  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||||| |  ||||||||| ||||||||||||||    
T  8555406 agattttatgttttccctcactaaatttccctca 8555439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 19241002 - 19240869
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  19241002 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19240903  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | |||| || ||||||||| | ||||||||||||    
T  19240902 gaattttacgttttccctcacaaaatttccctca 19240869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 19314186 - 19314053
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  19314186 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19314087  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | |||| || ||||||||| | ||||||||||||    
T  19314086 gaattttacgttttccctcacaaaatttccctca 19314053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 24576026 - 24576159
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  24576026 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 24576125  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||  ||||||||| |||||| |||||||    
T  24576126 agatttcatgttttccctcgctaaatatccctca 24576159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 27910766 - 27910899
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| |||||| ||||| |||||||| |||||||||||    
T  27910766 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcacaaaatttagtgacggaattagagag 27910865  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  |||||||||  ||||| |||||||    
T  27910866 ggatttcatgttttccctcagtaaatatccctca 27910899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 27957185 - 27957318
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| |||||| ||||| |||||||| |||||||||||    
T  27957185 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcacaaaatttagtgacggaattagagag 27957284  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  |||||||||  ||||| |||||||    
T  27957285 ggatttcatgttttccctcagtaaatatccctca 27957318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 29345206 - 29345073
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||||||||   |||||||||  ||||| |||||| |||||||| ||||||| |||    
T  29345206 ctactagaaaaagaaaaattagggagggaaattagtgacggaaaaaataaaatctttcacaaatttcttagtggcaaaatttagtgacggaattagggag 29345107  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||||||||||||||||||    
T  29345106 ggatttcacgttttccctctctaaatttccctca 29345073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 13060933 - 13061056
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  13060933 ctactagcaaaagcaaaattagcgaggtaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacagaattagagag 13061032  T
Q  280 ggatttcacattttccctctctaa 303  Q
    ||||||||  ||||||||| ||||    
T  13061033 ggatttcatgttttccctcactaa 13061056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 19256347 - 19256220
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||| |||||||||||||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  19256347 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 19256248  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || ||||||||| ||||||||    
T  19256247 ggattttacgttttccctcactaaattt 19256220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 19488063 - 19488186
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  19488063 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19488162  T
Q  280 ggatttcacattttccctctctaa 303  Q
    | |||||| |||||||||| ||||    
T  19488163 gaatttcatattttccctcactaa 19488186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 18010057 - 18010195
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| |||| ||||||||||||||| | ||||||||| ||||| ||||||||| |||| |||||||||||| ||  |||||||| |||||||| ||||||    
T  18010057 ttacactaccagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaatta 18010156  T
Q  275 gagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||  |||||||||  ||||| |||||||    
T  18010157 gagagggatttcatgttttccctcaataaatatccctca 18010195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 25655860 - 25655978
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| ||||||| ||||||||||||    
T  25655860 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgatagaattagagag 25655959  T
Q  280 ggatttcacattttccctc 298  Q
    ||||||||| |||||||||    
T  25655960 ggatttcacgttttccctc 25655978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 6817189 - 6817056
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  ||  |||||||||| ||||||||| |||| |||||||||||  || ||| ||||| |||||||| |||||||||||    
T  6817189 ctactagaaaaagcaaaattagcaaggaaaatcagtgacggaaaaaatgaaattcctcacaaatttcttggtcacaaaatttagtgacggaattagagag 6817090  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||||| |||||||||||| ||||||||||||||    
T  6817089 agattttacattttccctcactaaatttccctca 6817056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 32961794 - 32961661
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| ||||||||||||| | ||| |||||||||||  |||||||| |||| |||||||||||  || ||||||||  |||||||| |||||||||||    
T  32961794 ctactaaaaaaagcaaaattagcgagggaaatcagtgacagaaaaaatgaaattcctcacaaatttcttggtcgcaaagtttagtgacggaattagagag 32961695  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | |||| |||||||||||| ||||||||||||||    
T  32961694 gaattttacattttccctcactaaatttccctca 32961661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 43431561 - 43431694
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || || |||||| ||||||||  ||||||||||    
T  43431561 ctactagaaaaagaaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggttgcaaaatttagtgacgaaattagagag 43431660  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  43431661 ggattttacgttttccctcactaaatttccctca 43431694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 11938879 - 11938753
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||| | |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  11938879 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaa-tgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 11938781  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || ||||||||| ||||||||    
T  11938780 ggattttacgttttccctcactaaattt 11938753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 32248044 - 32247921
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  32248044 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatttagtgacggaattagagag 32247945  T
Q  280 ggatttcacattttccctctctaa 303  Q
    ||||||||| ||||||||| ||||    
T  32247944 ggatttcacgttttccctcactaa 32247921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 17810433 - 17810300
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||  || ||||||||| ||||||||  ||||||||||    
T  17810433 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacgaaattagagag 17810334  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  17810333 ggatttcatgttttccctcactaaatatccctca 17810300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 21350613 - 21350480
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||  |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||     
T  21350613 ctactagaaaaagcaaaataagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagat 21350514  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || |||| |||| ||||||||||||||    
T  21350513 ggattttacgtttttcctcactaaatttccctca 21350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 305
Target Start/End: Complemental strand, 22939448 - 22939323
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||  ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  22939448 ctactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcacaaattcctttgtcgcaaaatttagtgacggaattagagag 22939349  T
Q  280 ggatttcacattttccctctctaaat 305  Q
     |||||||  ||||||||| ||||||    
T  22939348 agatttcatgttttccctcactaaat 22939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 33652702 - 33652569
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||| ||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| || |||||||     
T  33652702 ctaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggagttagagaa 33652603  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  33652602 ggatttcatgttttccctcactaaatatccctca 33652569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 207 - 303
Target Start/End: Original strand, 26399036 - 26399132
Alignment:
Q  207 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 303  Q
    ||||| ||||| ||||||||||||||  |||||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||||||||| ||||    
T  26399036 gaaattagtgacggaaaaaataaaatctctcacaaattcgttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaa 26399132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 177 - 313
Target Start/End: Complemental strand, 37992237 - 37992101
Alignment:
Q  177 acgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattaga 276  Q
    |||||||||| |||||||||||| | |||  |||| ||||| |||||| ||||||| | ||||| |||| |||||||||||| |||||||| ||||||||    
T  37992237 acgctactaggaaaagcaaaattagggaggaaaattagtgacggaaaacataaaatccttcacatattctttagtcgcaaaatttagtgacggaattaga 37992138  T
Q  277 gagggatttcacattttccctctctaaatttccctca 313  Q
    ||| |||||||  ||||||||| |||||||| |||||    
T  37992137 gagagatttcatgttttccctcactaaattttcctca 37992101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 25000433 - 25000560
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| ||||||||| || || ||||| |||||||||||    
T  25000433 ctactagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcagaattttgtgacggaattagagag 25000532  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||| | || ||||||||| ||||||||    
T  25000533 ggatgttacgttttccctcactaaattt 25000560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 6816385 - 6816518
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| ||||||| |||| | ||| ||||| ||||||| ||||||||||||  ||||||||||| || || |||||| |||||| | |||||||||||    
T  6816385 ctactaggaaaagcataattagcgagggaaattagtgatgaaaaaaataaaatttctcacaaattccttggttgcaaaatttagtggcggaattagagag 6816484  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  6816485 ggatttcatgttttccctcactaaatatccctca 6816518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 15251736 - 15251608
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||| |||||||||||||| | ||| ||||| ||||| ||||||||||||||  ||||| | ||  || ||||||||| |||||||||||||||||||     
T  15251736 ctacttgaaaaagcaaaattagggagggaaattagtgacggaaaaaataaaatctctcacgatttt-ttggtcgcaaaatttagtgacagaattagagaa 15251638  T
Q  280 ggatttcacattttccctctctaaatttcc 309  Q
    ||||||||| |||||||||| |||||||||    
T  15251637 ggatttcacgttttccctctttaaatttcc 15251608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 24193198 - 24193331
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  24193198 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 24193297  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||  ||||||||| | ||||||| ||||    
T  24193298 agatttcatgttttccctcacaaaatttctctca 24193331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 23752292 - 23752411
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| || || ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| ||||||||||| |||    
T  23752292 tagaaaaagcaaaattagcgagggatattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagtgat 23752391  T
Q  284 ttcacattttccctctctaa 303  Q
    || |||||||||||| ||||    
T  23752392 tttacattttccctcactaa 23752411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 25273330 - 25273452
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||| | ||||||| |||  |||||||||||| || ||||||||| ||||||||||||||||||||    
T  25273330 ctactagaaaaagcaaaattaacgagggaaattagtgacg-aaaaaatgaaagtcctcacaaattctttggtcgcaaaatttagtgacagaattagagag 25273428  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  25273429 ggattttacgttttccctcactaa 25273452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 30466956 - 30467083
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||| |||||| ||||| |||||  || ||||||||| |||||||  |||||||||||    
T  30466956 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaattaaaattcctcataaatttcttggtcgcaaaatttagtgatggaattagagag 30467055  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
     ||||| || ||||||||| ||||||||    
T  30467056 agattttacgttttccctcactaaattt 30467083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 31399510 - 31399633
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| |||||||   ||| ||||| ||||||| ||||||| |||| ||||||||||||  | ||||||||| |||||||| ||||||||||     
T  31399510 ctactagaaaaaacaaaattaacgagggaaattagtgatgaaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagat 31399609  T
Q  280 ggatttcacattttccctctctaa 303  Q
    ||||||||| ||||||||| ||||    
T  31399610 ggatttcacgttttccctcactaa 31399633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 29351059 - 29350925
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtga-tggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||||||||||||||||| | ||| ||||| ||||| | |||||||| |||| |||||||||||   | ||||||||| ||||||||  |||||||||    
T  29351059 ctactagaaaaagcaaaattagcgagggaaattagtgactagaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacgcaattagaga 29350960  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||  ||||||||| |||||| |||||||    
T  29350959 gggatttcatgttttccctcactaaatatccctca 29350925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 16061941 - 16062074
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | |||||||||  ||||||| |||||||||||    
T  16061941 ctactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatgtagtgacggaattagagag 16062040  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||| |||| ||||   ||||||||||||    
T  16062041 tgatttcacgtttttcctcaaaaaatttccctca 16062074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 31344182 - 31344307
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    ||||| |||||| ||||  ||||| ||||||||||||||| ||||  |||| |||||  ||  |||||||| ||| |||| |||||||||||| ||||||    
T  31344182 aaaagtaaaattagagaaggaaattagtgatggaaaaaatcaaatttctcataaatttcttgatcgcaaaatttaatgacggaattagagaggaatttca 31344281  T
Q  288 cattttccctctctaaatttccctca 313  Q
    ||||||||||||||||| ||||||||    
T  31344282 cattttccctctctaaaattccctca 31344307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 5670198 - 5670298
Alignment:
Q  207 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 306  Q
    ||||| ||||| |||||||||  ||| |||||||||||| || ||||||||| |||||||| ||||||||||||||||| || ||||||||| |||||||    
T  5670198 gaaattagtgacggaaaaaatggaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatt 5670297  T
Q  307 t 307  Q
    |    
T  5670298 t 5670298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 24636788 - 24636660
Alignment:
Q  180 ctactagaaaa-agcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    ||||||||||| |||||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||  ||  |||||||| |||||||| ||||||||||    
T  24636788 ctactagaaaatagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagaga 24636689  T
Q  279 gggatttcacattttccctctctaaattt 307  Q
    ||||||| || ||||||||| ||||||||    
T  24636688 gggattttacgttttccctcactaaattt 24636660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 18844541 - 18844679
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| ||||||| |||||||||||| | ||  | |||  ||||||||||| ||||||| |||||||||||  || ||||||||| ||| | ||| |||||    
T  18844541 ttacactactaggaaaagcaaaattagggatggtaatttgtgatggaaaacataaaattcctcacaaattttttggtcgcaaaatttaataacaaaatta 18844640  T
Q  275 gagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||  |||||| || ||||||||||||||    
T  18844641 gagagggatttcatgttttccttcactaaatttccctca 18844679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 6084252 - 6084378
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | |||| |||| ||||| ||||||||||||||  ||| ||||||| || |||  |||| |||||||| ||||||||||| |||    
T  6084252 tagaaaaagcaaaattagggagataaattagtgacggaaaaaataaaat--ctcccaaattccttggtctaaaaatttagtgacggaattagagagagat 6084349  T
Q  284 ttcacattttccctctctaaatttccctc 312  Q
    || ||||||||  ||||||||||| ||||    
T  6084350 ttgacattttcagtctctaaatttacctc 6084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 9631539 - 9631406
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgac-agaattagaga 278  Q
    |||||||||||||||||||| |  ||  |||| ||||| |||||||||||||| ||||||||||||  || |||||||| ||||||||  ||||||||||    
T  9631539 ctactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaataaaattcctcacaaattctatactcgcaaaatttagtgacgggaattagaga 9631440  T
Q  279 gggatttcacattttccctctctaaatttccctc 312  Q
    |  ||||||| |||||| || | |||||||||||    
T  9631439 gaaatttcacgttttccttcacaaaatttccctc 9631406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 40289423 - 40289555
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||  |||||| | |||  |||| ||||| ||||||||| || |  ||||||||||| || ||||||||| |||||||| ||||||| |||    
T  40289423 ctactagaaaaattaaaattagcgaggaaaattagtgacggaaaaaatgaattttctcacaaattccttggtcgcaaaatttagtgacggaattag-gag 40289521  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  40289522 ggattttacgttttccctcactaaatttccctca 40289555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 3692176 - 3692306
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaa-aataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    |||||||| ||||||  | ||||||||| |||||| ||||| |||||||| |||||||||||| ||||||  |||| ||||| |  |||||||||| |||    
T  3692176 tagaaaaaacaaaatcagggagagaaataagtgatagaaaaaaataaaattcctcacaaattctttagtcataaaatttagtaatggaattagagaagga 3692275  T
Q  283 tttcacattttccctctctaaatttccctca 313  Q
    ||| || |||| ||||| |||||||||||||    
T  3692276 ttttacgttttacctctataaatttccctca 3692306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 5879300 - 5879206
Alignment:
Q  219 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||| |||||||||||  || |||| |||| |||||||| |||||||||||| |||| || |||| |||| ||||||||||||||    
T  5879300 ggaaaaaataaaattcctcacaaatttcttggtcgtaaaatttagtgacggaattagagaggcattttacgtttttcctcactaaatttccctca 5879206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 19493690 - 19493762
Alignment:
Q  213 agtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggattt 285  Q
    ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||||||||    
T  19493690 agtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggattt 19493762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 21219242 - 21219350
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||  | ||||||||| ||||| ||||||||| ||||  |||| |||||  || ||||||||| |||||||  |||||||||||    
T  21219242 ctactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattactcataaattttttggtcgcaaaatttagtgatggaattagagag 21219341  T
Q  280 ggatttcac 288  Q
    |||||||||    
T  21219342 ggatttcac 21219350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 42700659 - 42700743
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagt 264  Q
    ||||||||||||| |||||| | |||  |||||||||| ||||||||| |||| |||||||||||| |||||||||||| |||||    
T  42700659 ctactagaaaaagtaaaattagcgaggaaaatcagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagt 42700743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 8789975 - 8789873
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | |||  ||||  ||||  ||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  8789975 ctactaggaaaagcaaaattagggaggaaaatttgtgactgaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 8789876  T
Q  280 gga 282  Q
    |||    
T  8789875 gga 8789873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 303
Target Start/End: Original strand, 33412974 - 33413095
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| ||||||||||||| |||||| | ||| ||||| ||| | ||||||||| |||| ||||||||||||      ||||||| |||||||| ||||||    
T  33412974 ttacactactagaaaaag-aaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaattc------cgcaaaatttagtgacggaatta 33413066  T
Q  275 gagagggatttcacattttccctctctaa 303  Q
    ||||||||||| || ||||||||| ||||    
T  33413067 gagagggattttacgttttccctcactaa 33413095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 395
Target Start/End: Complemental strand, 44595867 - 44595810
Alignment:
Q  338 ttaggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||    
T  44595867 ttaggttcgattctctttagtgtcaatttagatggactaatttagcttcttaaaaaaa 44595810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 284
Target Start/End: Complemental strand, 10917962 - 10917858
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| |||||  |||| |||||| ||||||| ||||| |||||  ||  | |||||| |||||||| |||||||||||    
T  10917962 ctactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaatttcttgattgcaaaatttagtgacggaattagagag 10917863  T
Q  280 ggatt 284  Q
    |||||    
T  10917862 ggatt 10917858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 17003402 - 17003270
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| |||||||||||||||||||| | |||  |||| ||||  |||||||||||||  ||||| |||||| ||  || ||||| ||| |||| | ||||    
T  17003402 ttacactactagaaaaagcaaaattagggaggaaaattagtgtgggaaaaaataaaacccctcataaattccttgatcacaaaatttaatgactgtatta 17003303  T
Q  275 gagagggatttcacattttccctctctaaattt 307  Q
    |||||  |||| || ||||||||||||||||||    
T  17003302 gagagcaattttacgttttccctctctaaattt 17003270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 185 - 303
Target Start/End: Complemental strand, 14304359 - 14304241
Alignment:
Q  185 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    ||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||| ||||||   | |||  |||| |||||| ||||| || |||||||||    
T  14304359 agaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaatccctcgcaaatttcctcgtcataaaatttagtgccagaaataaagagggatt 14304260  T
Q  285 tcacattttccctctctaa 303  Q
    || | ||||||||| ||||    
T  14304259 tcgcgttttccctcactaa 14304241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 25274732 - 25274654
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaa 258  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || |||||||||    
T  25274732 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaa 25274654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 24479874 - 24479925
Alignment:
Q  254 caaaagttagtgacagaattagagagggatttcacattttccctctctaaat 305  Q
    ||||| ||||||||||||||||||||| ||||||| |||||| |||||||||    
T  24479874 caaaatttagtgacagaattagagaggaatttcacgttttccttctctaaat 24479925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 27750796 - 27750851
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| || |||| ||||||||||| ||||||||||||||||| ||||||    
T  27750796 aggttcgattccctctagtgtcaatttggatggactaatttagcttcttaaaaaaa 27750851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 338 - 395
Target Start/End: Complemental strand, 11492085 - 11492028
Alignment:
Q  338 ttaggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||||||||| ||| ||||||||| | | ||||||||||||||| ||||||    
T  11492085 ttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttcttaaaaaaa 11492028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 2265407 - 2265474
Alignment:
Q  207 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    ||||| ||||| |||||||||||||| | |||||||||| ||  || ||||| |||||||||||||||    
T  2265407 gaaattagtgacggaaaaaataaaatccttcacaaattctttgatcacaaaatttagtgacagaatta 2265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 11819842 - 11819897
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| || |||| ||||||||| | | ||||||||||||||||||||||    
T  11819842 aggttcgattcactctagtgtcaatttgggtgggctaatttagcttcttcaaaaaa 11819897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 12150740 - 12150685
Alignment:
Q  338 ttaggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaa 393  Q
    |||||||||||||||||   ||||||||| |||||||||||||| ||| |||||||    
T  12150740 ttaggttcgattctcttcgatatcaatttagatagactaatttaactttttcaaaa 12150685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 33727883 - 33727828
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| || |||| ||||||||||| | ||||||||||||||| ||||||    
T  33727883 aggttcgattccctctagtgtcaatttggatgggctaatttagcttcttaaaaaaa 33727828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 35672515 - 35672480
Alignment:
Q  360 tcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35672515 tcaatttggatggactaatttagcttcttcaaaaaa 35672480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 41527730 - 41527809
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||| ||||| |||||||||||||| ||||| |||||| ||  |||||||| ||||| ||| |||||| ||| |||||||    
T  41527730 aaattagtgacggaaaaaataaaatccctcataaattccttgatcgcaaaatttagtaacataattagggagagatttca 41527809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 43594328 - 43594273
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||||| |||| ||||||||||| | ||||||||| ||||| ||||||    
T  43594328 aggttcgattctctctagtgtcaatttggatgggctaatttagtttcttaaaaaaa 43594273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 30241130 - 30241172
Alignment:
Q  338 ttaggttcgattctctttagtatcaatttggatagactaattt 380  Q
    |||||||||||| |||||||| ||||||| |||||||||||||    
T  30241130 ttaggttcgattatctttagtgtcaattttgatagactaattt 30241172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 44544011 - 44543957
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaa 394  Q
    ||||||||||||||||  | ||||||||||| ||||| |||| ||||||||||||    
T  44544011 aggttcgattctctttgatgtcaatttggatggactagtttatcttcttcaaaaa 44543957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 27979225 - 27979278
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||| ||| |||| ||||||||||| | |||||||| |||||||||||||    
T  27979225 gttcgattatctctagtgtcaatttggatgggctaatttaacttcttcaaaaaa 27979278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 28036494 - 28036547
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||| ||| |||| ||||||||||| | |||||||| |||||||||||||    
T  28036494 gttcgattatctctagtgtcaatttggatgggctaatttaacttcttcaaaaaa 28036547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 8704477 - 8704425
Alignment:
Q  343 ttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| |  ||| |||||||||||||||||||| |||||| ||||||    
T  8704477 ttcgattctctctgatattaatttggatagactaatttatcttcttaaaaaaa 8704425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 5e-36; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 20959645 - 20959512
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | |||  |||||| ||| |||||||||||||| |||||||||||| ||||||| |||| |||||||| |||||||||||    
T  20959645 ctactagaaaaagtaaaattagggaggaaaatcactgacggaaaaaataaaattcctcacaaattccttagtcgtaaaatttagtgacggaattagagag 20959546  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||| ||||||||||||||||||||||||    
T  20959545 agatttcacgttttccctctctaaatttccctca 20959512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 25652589 - 25652718
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| |||||||||||  |||||||| |||| |||||||||||| |||||||||||| || ||||| |||||||||||||||    
T  25652589 tagaaaaagcaaaattagcgagggaaatcagtgacagaaaaaatgaaattcctcacaaattccttagtcgcaaaattttgtgacggaattagagagggat 25652688  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    || |||||||||||| ||||||||||||||    
T  25652689 tttacattttccctcactaaatttccctca 25652718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 11927792 - 11927921
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | |||| |||| || ||||||||||||||||| |||||||||||  || ||||||||| |||||||| |||||||||||||||    
T  11927792 tagaaaaagcaaaattagggagataaattagagatggaaaaaataaaatccctcacaaattacttcgtcgcaaaatttagtgacggaattagagagggat 11927891  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    ||||| |||||| |||||||| ||||||||    
T  11927892 ttcacgttttccgtctctaaaattccctca 11927921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 16121841 - 16121974
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||||||||||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  16121841 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagag 16121940  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  16121941 ggatttcatgttttccctcactaaatatccctca 16121974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 17039633 - 17039766
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  17039633 ctactagaaaaagcaaaattagtgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 17039732  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| ||| ||||||||||    
T  17039733 ggatttcacgttttccctcactatatttccctca 17039766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 33818563 - 33818696
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  33818563 ctactagaaaaagcaaaattggggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 33818662  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  33818663 ggatttcatgttttccctcactaaatttccctca 33818696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 36196531 - 36196398
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||| ||  | ||||||||| |||||||| |||||||||||    
T  36196531 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaaatccatggtcgcaaaatttagtgacggaattagagag 36196432  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||||||||| | ||||||||||||    
T  36196431 ggatttcacattttccctcacaaaatttccctca 36196398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 174 - 313
Target Start/End: Original strand, 17036408 - 17036547
Alignment:
Q  174 cttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatt 273  Q
    ||||| ||||||||||| |||||||| | ||| || || ||||| |||| ||||||||| |||||||||||| || ||||||||| ||||||||||||||    
T  17036408 cttacactactagaaaatgcaaaattagggagcgagattagtgacggaagaaataaaattcctcacaaattccttggtcgcaaaatttagtgacagaatt 17036507  T
Q  274 agagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||  | ||||||||||||||||| ||||||    
T  17036508 agagagggattttgcgttttccctctctaaattaccctca 17036547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 618427 - 618298
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||||||    
T  618427 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggat 618328  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    ||||  ||||||||| |||||| |||||||    
T  618327 ttcatgttttccctcactaaatatccctca 618298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 2472716 - 2472853
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||  ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||| |||| |||||||||||    
T  2472716 ctactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagagag 2472815  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
    ||||||||  ||||||||| |||||| |||||||||||    
T  2472816 ggatttcatgttttccctcactaaatatccctcattaa 2472853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 8886853 - 8886986
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  ||||  |||| | ||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  8886853 ctactagaaaaagcaaaattagcgaggaaaatttgtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 8886952  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| |||||||||||| ||||||||||||||    
T  8886953 ggattttacattttccctcactaaatttccctca 8886986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 746870 - 746993
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||| ||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  746870 ctacaagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 746969  T
Q  280 ggatttcacattttccctctctaa 303  Q
    ||||||||| ||||||||| ||||    
T  746970 ggatttcacgttttccctcactaa 746993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 10420249 - 10420387
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| |||||| | ||| ||||||| ||||| ||||| ||||| |||||||||||||| |||||||| || ||| ||||||||| ||||||||| |||||    
T  10420249 ttacactactaaagaaatcaaaattagagagggaaattagtgacggaaaaaataaaatccctcacaattttgttggtcgcaaaatttagtgacaaaatta 10420348  T
Q  275 gagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||  ||||||||||||||| || |||||    
T  10420349 gagagggatttcatgttttccctctctaaaatttcctca 10420387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 12045864 - 12045731
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || |||| |||| |||||||| ||||||||||     
T  12045864 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgtaaaatttagtgacggaattagagaa 12045765  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  12045764 ggattttacgttttccctcactaaatttccctca 12045731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 13620129 - 13620258
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||  | ||| ||||| ||||| ||||||||||||||  |||||||||| ||| ||||||||| || |||||||||||||||||    
T  13620129 ctactagaaaaagaaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttgttggtcgcaaaattttgtgacagaattagagag 13620228  T
Q  280 ggatttcacattttccctctctaaatttcc 309  Q
    ||||||||  ||||||||| ||||||||||    
T  13620229 ggatttcatgttttccctcactaaatttcc 13620258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 35620350 - 35620482
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| ||||| |||||||||||| | |||||||||||| || ||||||||| |||||||| |||||||||| ||||    
T  35620350 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaatt-cctcacaaattccttggtcgcaaaatttagtgacggaattagagaaggat 35620448  T
Q  284 ttcacattttccctctctaaatttccctcattaa 317  Q
    ||||  ||||||||| |||||| |||||||||||    
T  35620449 ttcatgttttccctcactaaatatccctcattaa 35620482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 38837673 - 38837796
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  38837673 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 38837772  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  38837773 ggattttacgttttccctcactaa 38837796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 23409118 - 23408984
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||||||||||||||||| | |||| |||| ||||| |||||||| | |||| |||||||||||  ||  |||||||| |||||||| ||||||||||    
T  23409118 ctactagaaaaagcaaaattagcgagaaaaattagtgacggaaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagaga 23409019  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    ||||||| || ||||||||| ||||||||||||||    
T  23409018 gggattttacgttttccctcactaaatttccctca 23408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 187 - 313
Target Start/End: Complemental strand, 23975765 - 23975639
Alignment:
Q  187 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 286  Q
    ||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| ||||||||||||||||||    
T  23975765 aaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttc 23975666  T
Q  287 acattttccctctctaaatttccctca 313  Q
    || ||||||||| | ||||||||||||    
T  23975665 acgttttccctcacaaaatttccctca 23975639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 7888934 - 7888801
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| || ||||||||    
T  7888934 ctactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggagttagagag 7888835  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| |||||||| |||||    
T  7888834 ggattttacgttttccctcactaaattttcctca 7888801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 8108862 - 8108995
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  8108862 ctactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 8108961  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | ||||||  ||||||||| | ||||||| ||||    
T  8108962 gaatttcatgttttccctcacaaaatttctctca 8108995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 28265477 - 28265614
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | |||  |||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  28265477 ctactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 28265576  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
    |||||| || | ||||||| | ||||||||||||||||    
T  28265577 ggattttacgtcttccctcacaaaatttccctcattaa 28265614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 32726736 - 32726857
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| | ||| ||||| |||||||||||| ||||||  | | |||||||| || ||||||||| |||||||| |||||||||||  ||||||    
T  32726736 aaaagcaaaattagggagcgaaattagtgatggaaaatataaaacccttgacaaattccttggtcgcaaaatttagtgacggaattagagagaaatttca 32726835  T
Q  288 cattttccctctctaaatttcc 309  Q
    ||||||||||||||||||||||    
T  32726836 cattttccctctctaaatttcc 32726857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 36831892 - 36832025
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| || || | ||||||| |||| ||||| |||||| || ||| ||||| |||||||  |||||||||||    
T  36831892 ctactagaaaaagcaaaattagtgagggaaattagggacgaaaaaaatgaaattcctcataaattccttggtcacaaaatttagtgatggaattagagag 36831991  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| |||||||||||| ||||||||||||||    
T  36831992 ggattttacattttccctcactaaatttccctca 36832025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 4125190 - 4125313
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  4125190 ctactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 4125289  T
Q  280 ggatttcacattttccctctctaa 303  Q
     |||||||||||||||||| ||||    
T  4125290 agatttcacattttccctcactaa 4125313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 10494874 - 10494751
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||  | | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  10494874 ctactagaaaaagcaaatgtagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 10494775  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  10494774 ggattttacgttttccctcactaa 10494751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 26708587 - 26708714
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||| |||||||| | ||| ||||| ||||  ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  26708587 ctactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 26708686  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    | |||| || ||||||||| ||||||||    
T  26708687 gaattttacgttttccctcactaaattt 26708714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 26978321 - 26978448
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||| |||||||| | ||| ||||| ||||  ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  26978321 ctactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 26978420  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    | |||| || ||||||||| ||||||||    
T  26978421 gaattttacgttttccctcactaaattt 26978448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 16472183 - 16472312
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagtt-agtgacagaattagaga 278  Q
    |||||||||||||||||||| | ||| ||||| ||||  | |||||||||||| | ||| ||||||||| |||||||||||| |||||||||||||||||    
T  16472183 ctactagaaaaagcaaaatttgggag-gaaattagtgtcgaaaaaaataaaatccttcaaaaattcgttggtcgcaaaagtttagtgacagaattagaga 16472281  T
Q  279 gggatttcacattttccctctctaaatttcc 309  Q
    | |||| ||| |||| |||||||||||||||    
T  16472282 gcgattccacttttttcctctctaaatttcc 16472312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 12328228 - 12328361
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||| | ||||||||| |||| |||||||||||  ||  |||||||| |||||||| |||||||||||    
T  12328228 ctactagaaaaagcaaaattagtgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagagag 12328327  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | ||||||  ||||||||| |||||| |||||||    
T  12328328 gaatttcatgttttccctcactaaatatccctca 12328361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 15061110 - 15060977
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||| ||||||||||||||| | ||| ||||| |||||  |||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  15061110 ctaccagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 15061011  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| |||| |||| | ||||||||||||    
T  15061010 ggatttcacgtttttcctcacaaaatttccctca 15060977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 27428022 - 27428147
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    ||||| |||||| | ||| ||||| ||||| | ||||||||||||  || | |||||| || ||||||||| |||||||| |||||||||||||||||||    
T  27428022 aaaagaaaaattagggagggaaattagtgacgaaaaaaataaaattgctaataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 27428121  T
Q  288 cattttccctctctaaatttccctca 313  Q
    | |||||||||||||||||| |||||    
T  27428122 cgttttccctctctaaattttcctca 27428147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 295
Target Start/End: Original strand, 16631876 - 16631991
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  16631876 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagag 16631975  T
Q  280 ggatttcacattttcc 295  Q
    |||||| || ||||||    
T  16631976 ggattttacgttttcc 16631991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 25397790 - 25397913
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| | |||||||||| || ||||||||| |||||||| |||||||||||    
T  25397790 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcgtcacaaattctttggtcgcaaaatttagtgacggaattagagag 25397889  T
Q  280 ggatttcacattttccctctctaa 303  Q
    ||||||||  ||||||||| ||||    
T  25397890 ggatttcatgttttccctcactaa 25397913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 5982783 - 5982645
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||||||||||||||||  | ||| ||||| ||||| |||||||| |  ||| |||||||||||| || ||||||||  |||||||| ||||||||||    
T  5982783 ctactagaaaaagcaaaatcagcgagggaaattagtgacggaaaaaaatggaattcctcacaaattccttggtcgcaaagtttagtgacggaattagaga 5982684  T
Q  279 gggatttcacattttccctctctaaatttccctcattaa 317  Q
    ||||||| |  ||||||||| |||||||| |||||||||    
T  5982683 gggattttaggttttccctcactaaattttcctcattaa 5982645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 7003732 - 7003863
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| ||||| |||||||| ||||| ||||||||||||  |  |||||||| |||||||| ||||||||||     
T  7003732 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcacaaattccatgatcgcaaaatttagtgacggaattagaga- 7003830  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||| ||||||||| | ||||||||||||    
T  7003831 -gatttcacgttttccctcacaaaatttccctca 7003863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 35778277 - 35778155
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||||||||| |||||| | ||| ||||| ||||||||||||||||||||  ||||||||||| || ||||||||| ||| | ||||||| ||| |||    
T  35778277 tactagaaaaagtaaaatttgggagggaaattagtgatggaaaaaataaaatctctcacaaattcattggtcgcaaaatttaatcacagaatgagatagg 35778178  T
Q  281 gatttcacattttccctctctaa 303  Q
    |||||||  ||||||||| ||||    
T  35778177 gatttcatgttttccctcactaa 35778155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 23423758 - 23423891
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| | |||||||||| | ||| |||||  |||| | |||| ||||||| |||||||||||| || || |||||| |||||||| |||||||||||    
T  23423758 ctactaggataagcaaaattagggagggaaatttgtgacgaaaaacataaaattcctcacaaattccttggttgcaaaatttagtgacggaattagagag 23423857  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||| ||||    
T  23423858 ggatttcatgttttccctcactaaatttcactca 23423891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 36716202 - 36716335
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| ||||||||||||||| |||| ||||||||||||  | |||| |||| ||| |||  ||||||||||     
T  36716202 ctactagaaaaaacaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctatggtcgtaaaatttaatgaaggaattagagaa 36716301  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | |||||| |||||    
T  36716302 ggatttcacgttttccctcacaaaattttcctca 36716335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 36597342 - 36597465
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||| ||||   ||| |||||| ||||||| |||||||||||| || |||| |||| ||||||||||||||||||||    
T  36597342 ctactagaaaaagcaaaatttgggagaaaaatttatgacggaaaacataaaattcctcacaaattccttggtcgtaaaatttagtgacagaattagagag 36597441  T
Q  280 ggatttcacattttccctctctaa 303  Q
    | |||| |  ||||||||| ||||    
T  36597442 gaattttatgttttccctcactaa 36597465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 17079503 - 17079409
Alignment:
Q  219 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||| ||| |||||||  || ||||||||| |||||||| ||||||||||||||||| |  |||||||| |||||||||||||||    
T  17079503 ggaaaaaataaaatcccttacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttgatgttttccctttctaaatttccctca 17079409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 33816800 - 33816893
Alignment:
Q  220 gaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||| ||| ||||||  ||||||||| ||||||||||||||    
T  33816800 gaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaaggaatttcatgttttccctcactaaatttccctca 33816893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 188 - 307
Target Start/End: Original strand, 3080706 - 3080825
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| |  || |||||  |||||||||||||||||||  ||||||||||| |||||| ||||| |||||||   |||| |||||||||||||    
T  3080706 aaaagcaaaattaggtagggaaattcgtgatggaaaaaataaaatctctcacaaattctttagtcacaaaacttagtgatgaaatttgagagggatttca 3080805  T
Q  288 cattttccctctctaaattt 307  Q
      ||||||||| ||||||||    
T  3080806 tgttttccctcactaaattt 3080825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 188 - 307
Target Start/End: Original strand, 20187951 - 20188070
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| | ||  ||||| ||||| |||||||||||||| |||||||||||| ||  |||||||| ||| |||||||||||||||| ||||  |    
T  20187951 aaaagcaaaattagcgaaggaaattagtgacggaaaaaataaaattcctcacaaattccttgatcgcaaaatttaatgacagaattagagagtgattcta 20188050  T
Q  288 cattttccctctctaaattt 307  Q
    | ||||| ||| ||||||||    
T  20188051 cgttttctctcactaaattt 20188070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 24138847 - 24138970
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | |||  ||||  |||| ||||||||| ||||  ||||||||||  || ||||||||| |||||||| ||||||||||| |||    
T  24138847 tagaaaaagcaaaattagcgaggaaaattggtgacggaaaaaatgaaatttctcacaaattgcttggtcgcaaaatttagtgacggaattagagagagat 24138946  T
Q  284 ttcacattttccctctctaaattt 307  Q
    || || ||||||||| ||||||||    
T  24138947 tttacgttttccctcactaaattt 24138970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 40484181 - 40484058
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||| ||| ||||  || | |||||| || ||||||||| |||||||| |||||||||||    
T  40484181 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaataatgaaatttcttataaattccttggtcgcaaaatttagtgacggaattagagag 40484082  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  40484081 ggattttacgttttccctcactaa 40484058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 13974080 - 13974213
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| || || | ||||||| |||| | |||||||||   | ||||  ||| |||||||| |||| ||||||    
T  13974080 ctactagaaaaagcaaaattagcgagggaaattagcgacgaaaaaaatgaaattcttcacaaatttcatggtcgtgaaatttagtgacggaatcagagag 13974179  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  13974180 ggatttcacgttttccctcacaaaatttccctca 13974213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 17771970 - 17772093
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||  | ||| ||||| ||||| ||||||||| |||| ||||| |||||| ||  |||||||| |||||||| |||||||||||    
T  17771970 ctactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcaaaaattccttgatcgcaaaatttagtgacggaattagagag 17772069  T
Q  280 ggatttcacattttccctctctaa 303  Q
     ||||| |  ||||||||| ||||    
T  17772070 agattttatgttttccctcactaa 17772093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 33734975 - 33735082
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | |||  |||| | ||| |||||||||||||| ||||| |||||| || ||||||||| |||||||| |||||| ||||    
T  33734975 ctactaggaaaagcaaaattagggaggaaaattaatgagggaaaaaataaaatccctcataaattccttggtcgcaaaatttagtgacggaattaaagag 33735074  T
Q  280 ggatttca 287  Q
    || |||||    
T  33735075 gggtttca 33735082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 25673259 - 25673363
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| |||||||||||||  ||| |||||||| || ||||||||| | |||||| |||||||||||||||||||  |||||  || ||||||||    
T  25673259 aaattagtgacggaaaaaataaaactcct-acaaattctttggtcgcaaaattcagtgacggaattagagagggatttcatgttttctgtcactaaattt 25673357  T
Q  308 ccctca 313  Q
    ||||||    
T  25673358 ccctca 25673363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 22649406 - 22649468
Alignment:
Q  255 aaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctcattaa 317  Q
    |||| ||| |||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  22649406 aaaatttaatgacggaattagagaaggatttcacgttttccctctctaaatttctctcattaa 22649468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 313
Target Start/End: Complemental strand, 18413652 - 18413560
Alignment:
Q  221 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||  ||||||| ||  ||||||| |||| |||  ||| |||||| | ||||| ||||| ||||||||||||||||||||||||    
T  18413652 aaaaaataaaatcactcacaagtttcttagtcgtaaaatttaacgacggaattaaaaagggaattcacgttttccctctctaaatttccctca 18413560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 31853112 - 31853212
Alignment:
Q  203 gagagaaatcagtgatggaaaa-aataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctct 301  Q
    ||||||||| |||||| ||||| |||||||| ||||| |||||   | ||||||||| |||||||| ||||||||||| |||||||  |||| |||||||    
T  31853112 gagagaaattagtgatagaaaaaaataaaatccctcataaattttatggtcgcaaaatttagtgacggaattagagagagatttcatgtttttcctctct 31853211  T
Q  302 a 302  Q
    |    
T  31853212 a 31853212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 23974606 - 23974682
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    |||| ||||| ||||||||||||||  ||||||||||| || |||| |||| ||| ||||  |||||||||||||||    
T  23974606 aaattagtgacggaaaaaataaaatctctcacaaattcctttgtcgtaaaatttaatgacgaaattagagagggatt 23974682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 19949606 - 19949571
Alignment:
Q  360 tcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||||||||||||| |||||||||||||    
T  19949606 tcaatttggatagactaatttaacttcttcaaaaaa 19949571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 28285319 - 28285373
Alignment:
Q  341 ggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| | |||| ||||||||| | | ||||||||||||||||||||||    
T  28285319 ggttcgattctttctagtgtcaatttgggtgggctaatttagcttcttcaaaaaa 28285373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 29727928 - 29727981
Alignment:
Q  260 ttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||| |||||||||||| ||||||| ||||||||| | |||||| |||||    
T  29727928 ttagtgacggaattagagaggaatttcacgttttccctcgcaaaatttgcctca 29727981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 9024323 - 9024243
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaa-ttagagagggatttca 287  Q
    |||| ||||| |||||||||||||| ||||  |||||| || ||||||||| ||||| ||| || |||||||| |||||||    
T  9024323 aaattagtgacggaaaaaataaaatccctcgtaaattccttggtcgcaaaatttagtaacataatttagagagagatttca 9024243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 5e-36; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 22128314 - 22128447
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||  | ||| ||||| ||||| ||||||||||||||  ||||||||||| || ||||||||| ||||||||||||||||||||    
T  22128314 ctactagaaaaaacaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggtcgcaaaatttagtgacagaattagagag 22128413  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| ||||||||||||||    
T  22128414 ggatttcacgttttccctcactaaatttccctca 22128447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 8879018 - 8878889
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||| ||||||||||||||  ||||| ||||| ||||| ||||||||||||||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  8879018 ctacaagaaaaagcaaaatcagagagggaaattagtgacggaaaaaataaaatctctcagaaattcgttggtcgcaaaatttagtgacagaattagagag 8878919  T
Q  280 ggatttcacattttccctctctaaatttcc 309  Q
    ||||||||  ||||||||| ||||||||||    
T  8878918 ggatttcatgttttccctcactaaatttcc 8878889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 30268990 - 30269123
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||||||||| ||||||||| |||| |||| ||||||  || ||||||||| |||||||| |||||||||||    
T  30268990 ctactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcgcaaattatttggtcgcaaaatttagtgacggaattagagag 30269089  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||||| |||||||||||| ||||||||||||||    
T  30269090 agattttacattttccctcgctaaatttccctca 30269123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 30283199 - 30283066
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||||||||| ||||||||| |||| |||| ||||||  || ||||||||| |||||||| |||||||||||    
T  30283199 ctactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcgcaaattatttggtcgcaaaatttagtgacggaattagagag 30283100  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||||| |||||||||||| ||||||||||||||    
T  30283099 agattttacattttccctcgctaaatttccctca 30283066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 32175739 - 32175872
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||| ||||| ||||| |||||||||||||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  32175739 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 32175838  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  32175839 ggattttacgttttccctcactaaatttccctca 32175872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 55309214 - 55309348
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||||| | |||| |||||||||||| || ||||||||| |||||||| ||||||||||    
T  55309214 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaga 55309313  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    ||||||| || ||||||||| ||||||||||||||    
T  55309314 gggattttacgttttccctcactaaatttccctca 55309348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 16915504 - 16915375
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||  | |||  |||| ||||||||||||||||||||  |||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  16915504 ctactagaaaaagcaaaatcagggaggaaaattagtgatggaaaaaataaaatctctcacaaatttgttggtcgcaaaatttagtgacaaaattagagag 16915405  T
Q  280 ggatttcacattttccctctctaaatttcc 309  Q
     ||||||| |||||||||| ||||||||||    
T  16915404 agatttcatattttccctcactaaatttcc 16915375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 27040027 - 27040160
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||||| ||||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  27040027 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 27040126  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  27040127 ggatttcacgttttccctcacaaaatttccctca 27040160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 46286231 - 46286364
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||  ||||| ||||| |||||||||||||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  46286231 ctactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 46286330  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  46286331 ggatttcacgttttccctcacaaaatttccctca 46286364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 19839314 - 19839182
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| |||||||||||    
T  19839314 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19839215  T
Q  280 ggatttcacattttccctctctaaatttccctc 312  Q
    |||||| || ||||||||| |||||||| ||||    
T  19839214 ggattttacgttttccctcactaaattttcctc 19839182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 30508122 - 30507999
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  ||||| |||| | |||||||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  30508122 ctactagaaaaagcaaaattagcgaggaaaatctgtgacgaaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 30508023  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| |||||||||||| ||||    
T  30508022 ggattttacattttccctcactaa 30507999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 182 - 313
Target Start/End: Complemental strand, 38223643 - 38223512
Alignment:
Q  182 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 281  Q
    ||||||||| | |||||| | ||| || || ||||| |||||||||||||| ||| |||||||| || ||||||||| ||||||||||||||||||||||    
T  38223643 actagaaaatgtaaaattagggagggagattagtgacggaaaaaataaaattccttacaaattccttggtcgcaaaatttagtgacagaattagagaggg 38223544  T
Q  282 atttcacattttccctctctaaatttccctca 313  Q
    ||||  | ||||||||||||||||||||||||    
T  38223543 attttgcgttttccctctctaaatttccctca 38223512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 9913393 - 9913260
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||  |||||| | |||  |||| ||||| ||||||||| |||| |||||||| ||  || ||||||||| ||||||||||||||||||||    
T  9913393 ctactagaaaaattaaaattagggaggaaaattagtgacggaaaaaattaaatccctcacaattttcttggtcgcaaaatttagtgacagaattagagag 9913294  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||||||||| ||||||||    
T  9913293 ggatttcacgttttccctctctaaaattccctca 9913260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 25147848 - 25147723
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| ||||| |||||   ||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||||||||||    
T  25147848 aaaagcaaaattagagagggaaatttatgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttca 25147749  T
Q  288 cattttccctctctaaatttccctca 313  Q
      ||||||||| ||||||||||||||    
T  25147748 tgttttccctcactaaatttccctca 25147723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 4586760 - 4586887
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| ||  ||| |||| |||||||| |||||||||||    
T  4586760 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgtaaaatttagtgacggaattagagag 4586859  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || ||||||||| ||||||||    
T  4586860 ggattttacgttttccctcactaaattt 4586887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 5473984 - 5473851
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| || |||||| |||| |||||| ||||| || ||||||||| |||||||| |||||| ||||    
T  5473984 ctactagaaaaagcaaaattagcgagggaaattagtgacgggaaaaatgaaattcctcaccaattccttggtcgcaaaatttagtgacggaattaaagag 5473885  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| |||||||| |||||    
T  5473884 ggattttacgttttccctcactaaattttcctca 5473851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 19680426 - 19680563
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||| | ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  19680426 ctactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 19680525  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
    |||||| || ||||||||| | ||||||||||||||||    
T  19680526 ggattttacgttttccctcacaaaatttccctcattaa 19680563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 22168403 - 22168270
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||| |||||| || ||||||||| |||||| | |||||||||||    
T  22168403 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcataaattccttggtcgcaaaatttagtgccggaattagagag 22168304  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | ||||||  ||||||||| |||||| |||||||    
T  22168303 gaatttcatgttttccctcactaaatatccctca 22168270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 187 - 303
Target Start/End: Complemental strand, 29625453 - 29625337
Alignment:
Q  187 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 286  Q
    ||||||||||||| | ||| ||||| | ||| ||||||||| |||| ||||||||||||  ||||||||||| |||||||| ||||||||||||||||||    
T  29625453 aaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcacaaattccatagtcgcaaaatttagtgacggaattagagagggatttc 29625354  T
Q  287 acattttccctctctaa 303  Q
    || ||||||||| ||||    
T  29625353 acgttttccctcactaa 29625337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 7111948 - 7112071
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || |||| |||| |||||||| |||||| ||||    
T  7111948 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgaaaaatttagtgacggaattatagag 7112047  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| |||||||||||| ||||    
T  7112048 ggattttacattttccctcactaa 7112071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 9670481 - 9670604
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  9670481 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 9670580  T
Q  280 ggatttcacattttccctctctaa 303  Q
    | |||| || ||||||||| ||||    
T  9670581 gaattttacgttttccctcactaa 9670604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 18715037 - 18714910
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||| ||| | ||| ||||| ||||| |||||||||||||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  18715037 ctactagaaaaagcaatattagcgagggaaataagtgacggaaaaaataaaattcctcacaaattccttggtctcaaaatttagtgacggaattagagag 18714938  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || |||| |||  ||||||||    
T  18714937 ggattttacgtttttccttactaaattt 18714910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 25026688 - 25026565
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    ||||||||| |||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| |||||||||||| |||||||| ||||||||||| |||    
T  25026688 tagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttagtcgcaaaatttagtgacggaattagagagagat 25026589  T
Q  284 ttcacattttccctctctaaattt 307  Q
    || || ||||||||| ||||||||    
T  25026588 tttacgttttccctcactaaattt 25026565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 38645885 - 38645762
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| || ||||||||    
T  38645885 ctactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggagttagagag 38645786  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  38645785 ggattttacgttttccctcactaa 38645762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 2275679 - 2275813
Alignment:
Q  180 ctactagaaaaagcaaaa-ttcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||||||||| ||||| || | ||| ||||| ||||| ||||||||| |||| |||||||||||| ||  |||||||| |||||||| ||||||||||    
T  2275679 ctactagaaaaaacaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagaga 2275778  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||  ||||||||| |||||| |||||||    
T  2275779 gggatttcatgttttccctcactaaatatccctca 2275813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 183 - 313
Target Start/End: Original strand, 37378628 - 37378758
Alignment:
Q  183 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    ||||||||||||||||| | |||  |||| | ||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| ||||||||||||||    
T  37378628 ctagaaaaagcaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 37378727  T
Q  283 tttcacattttccctctctaaatttccctca 313  Q
    |||||  ||||||||| | ||||||||||||    
T  37378728 tttcatgttttccctcacaaaatttccctca 37378758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 1638582 - 1638449
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||| ||||||| | ||| ||||| ||||| |||||||||||||| ||||||| |||| || ||||||||| |||||||| ||||||| |||    
T  1638582 ctactaggaaaaacaaaattagggagggaaattagtgacggaaaaaataaaatccctcacatattctttggtcgcaaaatttagtgacggaattagggag 1638483  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | ||||||  ||||||||| |||||||| |||||    
T  1638482 gaatttcatgttttccctcactaaattttcctca 1638449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 5399744 - 5399611
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| ||||||||| || | |||  ||||  |||| |||||| ||||||| |||||||||||| || || |||||| |||||||| |||||||||||    
T  5399744 ctactaggaaaagcaaacttagggaggaaaatttgtgacggaaaacataaaattcctcacaaattccttggttgcaaaatttagtgacggaattagagag 5399645  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  5399644 ggatttcatgttttccctcactaaatttccctca 5399611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 13564917 - 13565050
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||| ||| |||| | |||||||||| || |||  |||| |||||||| |||||||||||    
T  13564917 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaataatgaaattcatcacaaattccttggtcataaaatttagtgacggaattagagag 13565016  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | |||| || ||||||||| ||||||||||||||    
T  13565017 gaattttacgttttccctcactaaatttccctca 13565050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 33914194 - 33914061
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  33914194 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaattttttggtcgcaaaatttagtgacggaattagagag 33914095  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  |||| |||| ||||||||||||||    
T  33914094 ggatttcatgtttttcctcactaaatttccctca 33914061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 45532585 - 45532714
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    ||||||||||||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||  ||  |||||||| ||| |||| |||||||||||||||    
T  45532585 tagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttaatgacggaattagagagggat 45532684  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    || || ||||||||| ||||||||||||||    
T  45532685 tttacgttttccctcactaaatttccctca 45532714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 185 - 313
Target Start/End: Complemental strand, 18051969 - 18051841
Alignment:
Q  185 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    ||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||     ||||||||| |||||||| ||||||||||||||||    
T  18051969 agaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaatttcacggtcgcaaaatttagtgacggaattagagagggatt 18051870  T
Q  285 tcacattttccctctctaaatttccctca 313  Q
    |||| ||||||||| | ||||||||||||    
T  18051869 tcacgttttccctcacaaaatttccctca 18051841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 36689812 - 36689680
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||| ||||||| |||||||   ||| ||||| ||||||||||||||| ||||  |||| |||||  || ||||||||| |||||||| |||||||||||    
T  36689812 ctacaagaaaaaacaaaattaacgagggaaattagtgatggaaaaaatgaaatttctcataaattttttggtcgcaaaatttagtgacggaattagagag 36689713  T
Q  280 ggatttcacattttccctctctaaatttccctc 312  Q
    ||||||||| ||||||| | |||||||||||||    
T  36689712 ggatttcacgttttcccacactaaatttccctc 36689680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 13028818 - 13028945
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||| || | |||  |||| ||||| |||||||||  ||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  13028818 ctactagaaaaagcaaacttagcgaggaaaattagtgacggaaaaaatgcaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 13028917  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || ||||||||| ||||||||    
T  13028918 ggattttacgttttccctcactaaattt 13028945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 38619982 - 38619859
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| ||||| |||||| || |||| |||| |||||||| |||||||||||    
T  38619982 ctactagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcataaattctttggtcgtaaaatttagtgacggaattagagag 38619883  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  38619882 ggattttacgttttccctcactaa 38619859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 54539421 - 54539294
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  ||  |||| ||||| ||||||||| |||| |||||||||||| |||||||||||| ||||||||  ||||| ||||    
T  54539421 ctactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacgcaattaaagag 54539322  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
     ||||| || ||||||||| ||||||||    
T  54539321 tgattttacgttttccctcactaaattt 54539294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 24682329 - 24682460
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| | ||| |||||||||||||| ||||||||||||  | ||||||||| ||||||   |||||||||||    
T  24682329 ctactagaaaaagaaaaattagggagggaaattaatgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtggtggaattagagag 24682428  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| |||||||| ||  |||||||||||    
T  24682429 ggatttcacgttttccctttc--aatttccctca 24682460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 44783618 - 44783480
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattag-aga 278  Q
    |||||||||||||||||| | | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||| |||| ||||||| |||    
T  44783618 ctactagaaaaagcaaaactagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagaaga 44783519  T
Q  279 gggatttcacattttccctctctaaatttccctcattaa 317  Q
    |||||||||  |||||| ||  ||||| |||||||||||    
T  44783518 gggatttcatgttttccttcgataaatatccctcattaa 44783480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 4627080 - 4627207
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| |||||||||||  ||  ||| |||| ||||||||  ||||||||||    
T  4627080 ctactagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcacaaatttcttgatcgtaaaatttagtgacgaaattagagag 4627179  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
     ||||| |||||||||||| ||||||||    
T  4627180 agattttacattttccctcactaaattt 4627207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 42055532 - 42055409
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| |||||| |||| | ||||||| |||| |||||||||||| || ||||||||| ||||| || ||||||| |||    
T  42055532 ctactagaaaaagcaaaattagcgagggaaatctgtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtaacggaattagtgag 42055433  T
Q  280 ggatttcacattttccctctctaa 303  Q
     ||||| ||||||| |||| ||||    
T  42055432 tgattttacatttttcctcactaa 42055409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 9238627 - 9238745
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| ||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  9238627 ctactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 9238726  T
Q  280 ggatttcacattttccctc 298  Q
      |||| || |||||||||    
T  9238727 aaattttacgttttccctc 9238745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 12072093 - 12071964
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| |||||| |||||||| |||| | ||| |||||| ||  |||||||| |||||||| |||||||||||||||    
T  12072093 tagaaaaagcaaaattagcgagcgaaattagtgatcgaaaaaatgaaattcttcataaattccttgatcgcaaaatttagtgacggaattagagagggat 12071994  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    || |  |||||| || |||||| |||||||    
T  12071993 tttatgttttccttcactaaatatccctca 12071964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 9058954 - 9059072
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  ||||  ||||| |||||||  ||||||||||| || ||||||||| ||| |||| |||||||||||    
T  9058954 ctactaggaaaagcaaaattagggagggaaatttgtgactgaaaacataaaatttctcacaaattccttggtcgcaaaatttaatgacggaattagagag 9059053  T
Q  280 ggatttcacattttccctc 298  Q
    ||||||||  |||||||||    
T  9059054 ggatttcatgttttccctc 9059072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 22156658 - 22156736
Alignment:
Q  235 ctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||| || ||||||||| |||||||| |||||||||||||||||||  ||||||||| |||||| |||||||    
T  22156658 ctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctca 22156736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 25225232 - 25225097
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||||| ||| |||||| |||||||  ||  ||||||| ||  |||||||| ||| | ||||||||||||||    
T  25225232 ctactagaaaaagaaaaattagggagggaaatcaatgacggaaaatataaaat--ctgtcaaattctttgatcgcaaaatttaataacagaattagagag 25225135  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
    |||||||||  ||||  |||||||||||| ||||||||    
T  25225134 ggatttcacgatttctttctctaaatttctctcattaa 25225097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 37761914 - 37761980
Alignment:
Q  250 gtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctcatta 316  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  37761914 gtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaaattttcctcatta 37761980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 303
Target Start/End: Original strand, 9239310 - 9239406
Alignment:
Q  207 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 303  Q
    ||||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| | | |||| |||||||||||||||||||| ||||||||| ||||    
T  9239310 gaaattagtgacggaaaaaatgaaattgctcacaaattccttggtcgcaaaattgaatgacggaattagagagggatttcacgttttccctcactaa 9239406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 30568006 - 30568130
Alignment:
Q  185 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    ||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | |||| |||| ||| |||| ||||||||||| ||||    
T  30568006 agaaaaaacaaaattagcgagcgaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgtaaaatttaatgacggaattagagagagatt 30568105  T
Q  285 tcacattttccctctctaaatttcc 309  Q
    | || ||||||||| | ||||||||    
T  30568106 ttacgttttccctcacaaaatttcc 30568130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 313694 - 313615
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||| ||||| |||||||||||||| ||||| |||||| || ||||||||| ||||| ||| ||||||||||||||||||    
T  313694 aaattagtgacggaaaaaataaaatccctcataaattctttggtcgcaaaatttagtaacataattagagagggatttca 313615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 4606831 - 4606954
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| ||||| |||||| | ||| ||||| ||||| ||| ||||||||||   |||||||||  || | ||||||| |||||||| |||||||||||    
T  4606831 ctactaggaaaagtaaaattagggagggaaattagtgacggacaaaataaaatctgtcacaaatttcttggccgcaaaatttagtgacggaattagagag 4606930  T
Q  280 ggatttcacattttccctctctaa 303  Q
     |||||||| ||||||||| ||||    
T  4606931 tgatttcactttttccctcactaa 4606954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 12106113 - 12105995
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    ||||||||| |||||| | ||| ||||| | ||||||||||||||||||  |||| |||||| || ||||| ||| |||||||| ||||||||||||| |    
T  12106113 tagaaaaagtaaaattagcgagggaaattattgatggaaaaaataaaatttctcataaattctttggtcgc-aaatttagtgacggaattagagaggggt 12106015  T
Q  284 ttcacattttccctctctaa 303  Q
    ||||  ||||||||| ||||    
T  12106014 ttcatgttttccctcactaa 12105995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 208 - 303
Target Start/End: Complemental strand, 14944853 - 14944758
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 303  Q
    |||| ||||| | ||||||| |||| |||||||||||  || ||||||||| |||||||| ||||||||||||||||| || ||||||||| ||||    
T  14944853 aaattagtgacgtaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 14944758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 18744100 - 18744205
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| ||||||||| ||||  ||||||||||   | |||  |||| |||||||| |||||||||||||||||||| ||||||||| | ||||||    
T  18744100 aaattagtgacggaaaaaatgaaatttctcacaaatttcatggtcataaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 18744199  T
Q  308 ccctca 313  Q
    ||||||    
T  18744200 ccctca 18744205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 221 - 313
Target Start/End: Complemental strand, 3613089 - 3612997
Alignment:
Q  221 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||| | |||||||||||| || ||||||||  ||||||||  ||||||||||| ||||||| |||| |||||||||| ||| ||||    
T  3613089 aaaaaataaattccctcacaaattccttggtcgcaaattttagtgacgaaattagagaggaatttcacgtttttcctctctaaaattctctca 3612997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 6553911 - 6553832
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||| ||||| |||||||||||||| ||||| |||||  || ||||||||| ||||| ||| ||||||||||||||||||    
T  6553911 aaattagtgacggaaaaaataaaatccctcataaatttcttggtcgcaaaatttagtaacataattagagagggatttca 6553832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 29238558 - 29238429
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||| ||||| | | ||| ||||| | ||| ||||||||||||||  ||||||||||| || ||  ||||| ||||||||||||||||| ||    
T  29238558 ctactaggaaaaacaaaactagggagggaaattattgacggaaaaaataaaatctctcacaaattctttggtttcaaaatttagtgacagaattagatag 29238459  T
Q  280 ggatttcacattttccctctctaaatttcc 309  Q
     ||||| |  |||| |||| ||||||||||    
T  29238458 agattttatgtttttcctcactaaatttcc 29238429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 313
Target Start/End: Complemental strand, 39235034 - 39234944
Alignment:
Q  221 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||| |||||||  ||||||||||  || ||||||||| ||||| ||| ||||||||||  ||||||| |||||| |||||||||||||||||    
T  39235034 aaaacataaaatttctcacaaattttttggtcgcaaaatttagtaacaaaattagagag--atttcacgttttccttctctaaatttccctca 39234944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 30420035 - 30420162
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  |||| ||||| |||||||||||||| | | |||||||  || |||| |  | ||||||||  ||||||||||    
T  30420035 ctactagaaaaagcaaaattagggaggaaaattagtgacggaaaaaataaaattcattacaaattacttggtcgaagcatttagtgacgaaattagagag 30420134  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    | ||||||  ||||| | ||||||||||    
T  30420135 gaatttcatgttttctcactctaaattt 30420162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 34557290 - 34557191
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| |||||||||||||| | |||||||||| || ||| ||||| ||| |||| |||||| |||  ||||| || ||||||||| ||||||||    
T  34557290 aaattagtgacggaaaaaataaaatccttcacaaattccttggtcacaaaatttaatgacggaattaaagacagattttaccttttccctcgctaaattt 34557191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 23104484 - 23104376
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    ||||||| |||| ||||||| | || | ||||||| || |||||||| |||||| | ||||||||||  | ||||||||| |||| ||||  ||||||||    
T  23104484 ctactaggaaaaacaaaattagggacaaaaatcagggacggaaaaaaataaaattcatcacaaattctatggtcgcaaaatttagggacatgattagaga 23104385  T
Q  279 gggatttca 287  Q
    |||||||||    
T  23104384 gggatttca 23104376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 8030212 - 8030159
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||| || |||| ||||||||| | | ||||||||||||||||||||||    
T  8030212 gttcgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaaaaa 8030159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 21660152 - 21660099
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||| ||| |||| ||||||| | ||||||||||||||||||| ||||||    
T  21660152 gttcgattatctctagtgtcaatttaggtagactaatttagcttcttaaaaaaa 21660099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 21668916 - 21668863
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||| ||| |||| ||||||| | ||||||||||||||||||| ||||||    
T  21668916 gttcgattatctctagtgtcaatttaggtagactaatttagcttcttaaaaaaa 21668863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 28635760 - 28635817
Alignment:
Q  338 ttaggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||||||| | ||  |||||||| | | ||||||||||||||||||||||    
T  28635760 ttaggttcgattctctctggtgccaatttgggtgggctaatttagcttcttcaaaaaa 28635817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 26605764 - 26605728
Alignment:
Q  135 tattgatttgggacttaggagtgtgctccttctcaag 171  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  26605764 tattgagttgggtcttaggagtgtgctccttctcaag 26605728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 5e-36; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 27449221 - 27449088
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  27449221 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 27449122  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  27449121 ggattttacgttttccctcactaaatttccctca 27449088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 29956505 - 29956368
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||||||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||| ||    
T  29956505 ctactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagaaag 29956406  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  29956405 ggatttcacattttccctcacaaaatttccctcattaa 29956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 30005660 - 30005523
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||||||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||| ||    
T  30005660 ctactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagaaag 30005561  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  30005560 ggatttcacattttccctcacaaaatttccctcattaa 30005523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 181 - 313
Target Start/End: Complemental strand, 1628347 - 1628215
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||||||||| |||||| | ||| ||||| | |||||||||||||||||| ||||| |||||| ||||||| |||| ||||||||  |||||||||||    
T  1628347 tactagaaaaagtaaaattagggagggaaattaatgatggaaaaaataaaattcctcataaattccttagtcgtaaaatttagtgacgaaattagagagg 1628248  T
Q  281 gatttcacattttccctctctaaatttccctca 313  Q
    |||||||| ||||||||||||||||||||||||    
T  1628247 gatttcacgttttccctctctaaatttccctca 1628215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 5261070 - 5260937
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  5261070 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 5260971  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||| ||||||||||    
T  5260970 ggattttacgttttccctcactatatttccctca 5260937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 9652711 - 9652578
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   ||||||||||| |||||||| |||||||||||    
T  9652711 ctactagaaaaagcaaaattggcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatagtcgcaaaatttagtgacggaattagagag 9652612  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | ||||||||||||    
T  9652611 ggatttcacgttttccctcacaaaatttccctca 9652578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 11085344 - 11085477
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||||||||||||| | ||||||||| |||| ||||| |||||| || ||||||||| |||||||| |||||||||||    
T  11085344 ctactagaaaaagtaaaattagcgagagaaatcagtaacggaaaaaatgaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagag 11085443  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||| |||||||| ||||||||| ||||    
T  11085444 ggatttcacaatttccctcactaaatttctctca 11085477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 181 - 313
Target Start/End: Complemental strand, 28390105 - 28389973
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||||||||| |||||  |||||  |||| ||||| ||||||||||||||  |||||||||||||| ||||||||| |||||||| |||||||||| |    
T  28390105 tactagaaaaagtaaaatcagagaggaaaattagtgacggaaaaaataaaatctctcacaaattcgttggtcgcaaaatttagtgacggaattagagaag 28390006  T
Q  281 gatttcacattttccctctctaaatttccctca 313  Q
    |||||||| ||||||||| ||||||||||||||    
T  28390005 gatttcacgttttccctcactaaatttccctca 28389973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 26098946 - 26098823
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  26098946 ctactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 26098847  T
Q  280 ggatttcacattttccctctctaa 303  Q
    ||||||||  ||||||||| ||||    
T  26098846 ggatttcatgttttccctcactaa 26098823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 48404993 - 48404866
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  48404993 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 48404894  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || ||||||||| ||||||||    
T  48404893 ggattttacgttttccctcactaaattt 48404866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 19269870 - 19269999
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||| ||||||||    
T  19269870 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaaagagggat 19269969  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    || || ||||||||| ||||||||||||||    
T  19269970 tttacgttttccctcactaaatttccctca 19269999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 19610471 - 19610338
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  19610471 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19610372  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  19610371 ggatttcatgttttccctcactaaatttccctca 19610338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 27212811 - 27212916
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| |||||| ||||||||||||| |||||||||||| |||||||||||| |||||||| |||||| ||||||||||||| |||| |||||||||||||    
T  27212811 aaattagtgatagaaaaaataaaatccctcacaaattctttagtcgcaaaatttagtgacggaattaaagagggatttcacgtttttcctctctaaattt 27212910  T
Q  308 ccctca 313  Q
    ||||||    
T  27212911 ccctca 27212916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 13921463 - 13921331
Alignment:
Q  175 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 274  Q
    |||| |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||    
T  13921463 ttacactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 13921364  T
Q  275 gagagggatttcacattttccctctctaaattt 307  Q
    ||||||||||| || ||||||||| ||||||||    
T  13921363 gagagggattttacgttttccctcactaaattt 13921331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 13905040 - 13905163
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  13905040 ctactagaaaaagcaaaattagagagcgaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 13905139  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  13905140 ggattttacgttttccctcactaa 13905163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 21490036 - 21490159
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||||| ||| ||||||||| ||||  ||||||||||| || ||||||||| ||||||||||||||||||||    
T  21490036 ctactagaaaaaacaaaattagtgagggaaatcaatgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacagaattagagag 21490135  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| |||||||||||| ||||    
T  21490136 ggattttacattttccctcactaa 21490159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 7623533 - 7623666
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||  | ||| ||||| ||||| ||||||||| ||||  |||||| |||| || ||||||||| |||||||| |||||||||||    
T  7623533 ctactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaatttctcacagattctttggtcgcaaaatttagtgacggaattagagag 7623632  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||||||||| | ||||||||||||    
T  7623633 ggatttcacattttccctcacaaaatttccctca 7623666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 8110472 - 8110339
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| ||| |||| |||||||||||    
T  8110472 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcggaaaatttaatgacggaattagagag 8110373  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | |||| || ||||||||| ||||||||||||||    
T  8110372 gaattttacgttttccctcactaaatttccctca 8110339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 11007685 - 11007818
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| | |||||||||  || ||||||||| |||||||| |||||||||||    
T  11007685 ctactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcgtcacaaatttcttggtcgcaaaatttagtgacggaattagagag 11007784  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  11007785 ggattttacgttttccctcactaaatttccctca 11007818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 11915891 - 11915758
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||| || |||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  11915891 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagagag 11915792  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  11915791 ggattttacgttttccctcactaaatttccctca 11915758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 16299994 - 16299861
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  16299994 ctactaggaaaagcaaaattagggagcgaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 16299895  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| | ||||||||||||    
T  16299894 ggatttcatgttttccctcaccaaatttccctca 16299861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 18104532 - 18104665
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  18104532 ctactagaaaaagcaaaattagcgagggaaattattgacggaaaaaattaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 18104631  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| | ||||||||||||    
T  18104632 ggatttcatgttttccctcacaaaatttccctca 18104665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 19223582 - 19223449
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| |||||  |||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  19223582 ctactagaaaaagcaaaattagcgagggaaattggtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagag 19223483  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||| | ||||||||||||||    
T  19223482 ggattttacgttttcccccactaaatttccctca 19223449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 25882699 - 25882570
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||||||    
T  25882699 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagagggat 25882600  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    ||||  ||||||||| |||||| |||||||    
T  25882599 ttcatgttttccctcactaaatatccctca 25882570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 26390636 - 26390769
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||||||||| ||||| ||||||||| |||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  26390636 ctactagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagag 26390735  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  || |||||| | |||| |||||||    
T  26390736 ggatttcatgttatccctcacaaaatatccctca 26390769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 46942620 - 46942487
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||  ||||| |||||  |||||||| |||| |||||||| ||  || ||||||||| ||||||||||||||||||||    
T  46942620 ctactagaaaaatcaaaattagggaaggaaattagtgacagaaaaaattaaatccctcacaattttcttggtcgcaaaatttagtgacagaattagagag 46942521  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||||||||| ||||||||    
T  46942520 ggatttcacgttttccctctctaaaattccctca 46942487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 185 - 313
Target Start/End: Complemental strand, 18539932 - 18539804
Alignment:
Q  185 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    ||||||||||||||| ||||| ||||| ||||| ||||||||| |||| ||||| |||||   | ||||||||| |||||||| ||||||||||||||||    
T  18539932 agaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcaaaaatttcatggtcgcaaaatttagtgacggaattagagagggatt 18539833  T
Q  285 tcacattttccctctctaaatttccctca 313  Q
    |||| ||||||||| | ||||||||||||    
T  18539832 tcacgttttccctcacaaaatttccctca 18539804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 5565855 - 5565732
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||  | ||| ||||| ||||| ||||||||||||||  ||||||||||  || ||||||||| ||||||||| ||||||||||    
T  5565855 ctactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttcttggtcgcaaaatttagtgacataattagagag 5565756  T
Q  280 ggatttcacattttccctctctaa 303  Q
    ||||||||| ||||||||| ||||    
T  5565755 ggatttcacgttttccctcactaa 5565732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 21816854 - 21816727
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  21816854 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 21816755  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    | |||| || ||||||||| ||||||||    
T  21816754 gaattttacgttttccctcactaaattt 21816727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 43329765 - 43329888
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| ||||||||||     
T  43329765 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagaa 43329864  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| |||||||||||| ||||    
T  43329865 ggattttacattttccctcactaa 43329888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 1310961 - 1311094
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  ||  |||| ||||| ||||||||| |||  |||||||||||| || ||||||||| |||||||| |||||||||||    
T  1310961 ctactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaaatcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 1311060  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || |||||| || ||||||||||||||    
T  1311061 ggattttacgttttccatcactaaatttccctca 1311094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 11219271 - 11219138
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| ||||  |||||||||||  ||||||||||| ||| |||| |||||||||||    
T  11219271 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccatagtcgcaaaatttaatgacggaattagagag 11219172  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||| | |||||| |||||    
T  11219171 ggatttcacgttttccctcacaaaattttcctca 11219138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 11837216 - 11837353
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| |||||  |||||||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  11837216 ctactagaaaaaacaaaattagcgagggaaattcgtgatggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagag 11837315  T
Q  280 ggatttcacattttccctctctaaatttccctcattaa 317  Q
    | ||||||  ||||||||| |||| | |||||||||||    
T  11837316 gaatttcatgttttccctcactaagtatccctcattaa 11837353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 17582331 - 17582436
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| |||||||||||||| ||||||||||||  | ||||||||| |||||||| |||||||||||||||||||| ||||||||| | ||||||    
T  17582331 aaattagtgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 17582430  T
Q  308 ccctca 313  Q
    ||||||    
T  17582431 ccctca 17582436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 18091549 - 18091682
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| ||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  18091549 ctactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggaattagagag 18091648  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| |  ||||||||| |||||| |||||||    
T  18091649 ggattttatgttttccctcactaaatatccctca 18091682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 23217210 - 23217343
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| |||||| |||||| | ||| ||||| | ||| ||||||||| |||| ||||||||||||  | ||| ||||| |||||||| |||||||||||    
T  23217210 ctactaaaaaaagaaaaattagggagggaaattaatgagggaaaaaatcaaattcctcacaaattctatggtcccaaaatttagtgacggaattagagag 23217309  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| |||||||||||||||||| |||||    
T  23217310 ggatttcacgttttccctctctaaattttcctca 23217343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 31250221 - 31250088
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||| |||||||| | |||  | || ||||| |||||||||||||| ||| |||||||  || ||||||||| ||||||||||||||||||||    
T  31250221 ctactagaaaatgcaaaattagggaggaagattagtgacggaaaaaataaaattccttacaaatttcttggtcgcaaaatttagtgacagaattagagag 31250122  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||    ||||||||||||||||||||||||    
T  31250121 ggattttgtgttttccctctctaaatttccctca 31250088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 31433870 - 31433737
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| |||||| |||||| || || ||||| |||||| |||||||||||||  ||||||||||| || |||| |||| |||||||| |||||||||||    
T  31433870 ctactaaaaaaagtaaaattagatagggaaattagtgatagaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacggaattagagag 31433771  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | ||||||| |||||||| |||||| ||||||||    
T  31433770 gaatttcacgttttccctttctaaaattccctca 31433737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 36543882 - 36543749
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | |||  |||| ||||||||||||||||||||  |||||| |||| || ||||||||| ||||||||  ||||||||||    
T  36543882 ctactagaaaaagaaaaattagggaggaaaattagtgatggaaaaaataaaatctctcacagattctttggtcgcaaaatttagtgacgaaattagagag 36543783  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| | ||||||||||||    
T  36543782 ggatttcatgttttccctcacaaaatttccctca 36543749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 26830485 - 26830577
Alignment:
Q  221 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||| ||||||||||||  | ||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  26830485 aaaaaataaaattcctcacaaattccatggtcgcaaaattttgtgacggaattagagagggatttcacgttttccctctctaaatttccctca 26830577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 5744549 - 5744426
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | |||  ||||  |||| |||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  5744549 ctactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaatgcctcacaaattccttagtcgcaaaatttagtgacggaattagagag 5744450  T
Q  280 ggatttcacattttccctctctaa 303  Q
     |||||||  ||||||||| ||||    
T  5744449 agatttcatgttttccctcactaa 5744426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 5781508 - 5781385
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | |||  ||||  |||| |||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  5781508 ctactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaatgcctcacaaattccttagtcgcaaaatttagtgacggaattagagag 5781409  T
Q  280 ggatttcacattttccctctctaa 303  Q
     |||||||  ||||||||| ||||    
T  5781408 agatttcatgttttccctcactaa 5781385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 17269606 - 17269729
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||  ||||| |  ||||||||||||||||| |||||||||||| ||  |||||||| |||||||| |||||||||||    
T  17269606 ctactagaaaaagcaaaattagcgatggaaattaacgatggaaaaaataaaattcctcacaaattctttgatcgcaaaatttagtgacggaattagagag 17269705  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||||| ||||| |||| ||||    
T  17269706 ggatttcatatttttcctcactaa 17269729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 10941667 - 10941785
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  10941667 ctactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 10941766  T
Q  280 ggatttcacattttccctc 298  Q
    ||||||||  |||||||||    
T  10941767 ggatttcatgttttccctc 10941785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 8428304 - 8428171
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||  |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  8428304 ctactagaaaaaataaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagag 8428205  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||  ||||||||| |||||| |||||||    
T  8428204 agatttcatgttttccctcactaaatatccctca 8428171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 17762775 - 17762642
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||| | ||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  17762775 ctactagaaagaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagag 17762676  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||  ||||||||| |||||| |||||||    
T  17762675 cgatttcatgttttccctcactaaatatccctca 17762642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 18380157 - 18380024
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||||||||| ||||||||| |||| | |||||||||  ||  ||| |||| |||||||| |||||| ||||    
T  18380157 ctactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaatgaaattcttcacaaatttcttgatcgtaaaatttagtgacggaattaaagag 18380058  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| ||||||||||||  |||||||||||||    
T  18380057 ggattttacattttccctcattaaatttccctca 18380024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 19064095 - 19063962
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||| | ||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  19064095 ctactagaaagaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagag 19063996  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||  ||||||||| |||||| |||||||    
T  19063995 cgatttcatgttttccctcactaaatatccctca 19063962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 19545615 - 19545510
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||||||||| || |||| |||| ||||||||    
T  19545615 aaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgtttttcctcactaaattt 19545516  T
Q  308 ccctca 313  Q
    ||||||    
T  19545515 ccctca 19545510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 27969048 - 27968919
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||  | ||| ||||| ||||| |||| |||||||||  ||||||  || ||| ||||||||| ||| ||||||||||||||||    
T  27969048 ctactagaaaaagcaaaatcagggagggaaattagtgacggaacaaataaaatctctcacacctttgttggtcgcaaaatttaatgacagaattagagag 27968949  T
Q  280 ggatttcacattttccctctctaaatttcc 309  Q
    ||||||||  ||||||||| ||||||||||    
T  27968948 ggatttcatgttttccctcactaaatttcc 27968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 29216125 - 29215992
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| ||||||||||||   |||  ||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  29216125 ctactaggaaaagcaaaattatggaggaaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 29216026  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  29216025 ggatttcatgttttccctcactaaatttccctca 29215992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 30219471 - 30219338
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  30219471 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaattttttggtcgcaaaatttagtgacggaattagagag 30219372  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  |||| |||| ||||||||||||||    
T  30219371 ggatttcatgtttttcctcactaaatttccctca 30219338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 49915576 - 49915451
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    ||||| ||||||  |||| |||||  |||| |||||| ||||||| ||| |||||||  |||||||||||| |||||||| |||||||||||||||||||    
T  49915576 aaaagtaaaattaaagagggaaatttgtgacggaaaacataaaatccctaacaaatttcttagtcgcaaaatttagtgacggaattagagagggatttca 49915477  T
Q  288 cattttccctctctaaatttccctca 313  Q
      ||||||||| ||||||||||||||    
T  49915476 tgttttccctcactaaatttccctca 49915451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 185 - 313
Target Start/End: Original strand, 4393357 - 4393485
Alignment:
Q  185 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 284  Q
    ||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||     ||||||||| |||||||| ||||||||||||||||    
T  4393357 agaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaatttcacggtcgcaaaatttagtgacggaattagagagggatt 4393456  T
Q  285 tcacattttccctctctaaatttccctca 313  Q
    |||| ||||||||| | ||||||||||||    
T  4393457 tcacgttttccctcacaaaatttccctca 4393485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 15063994 - 15064117
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  15063994 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 15064093  T
Q  280 ggatttcacattttccctctctaa 303  Q
     |||||||  ||||||||| ||||    
T  15064094 agatttcatgttttccctcactaa 15064117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 23773610 - 23773487
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| |  || ||||| ||||| |||| |||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  23773610 ctactagaaaaaacaaaattagtaagggaaattagtgacggaagaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 23773511  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  23773510 ggattttacgttttccctcactaa 23773487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 29236173 - 29236050
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  |||||||| |  || ||||||||| |||||||| |||||||||||||||    
T  29236173 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaaattcttggtcgcaaaatttagtgacggaattagagagggat 29236074  T
Q  284 ttcacattttccctctctaaattt 307  Q
    || || ||||||||| ||||||||    
T  29236073 tttacgttttccctcactaaattt 29236050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 46012730 - 46012853
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||  | |||  |||| ||||| ||||||||||||||  ||||||||||| ||  |||||||| ||||||||| ||||||||||    
T  46012730 ctactagaaaaagcaaaatcagggaggaaaattagtgacggaaaaaataaaatctctcacaaattccttgatcgcaaaatttagtgacaaaattagagag 46012829  T
Q  280 ggatttcacattttccctctctaa 303  Q
    ||||||||  ||||||||| ||||    
T  46012830 ggatttcatgttttccctcactaa 46012853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 15490167 - 15490035
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| ||||||||||||  | |||| |||| ||||| | ||||||||||||  ||||||||||  || ||||||||| ||||||||| ||||| ||||    
T  15490167 ctactaaaaaaagcaaaatcagggagaaaaattagtgacgaaaaaaataaaatctctcacaaattttttggtcgcaaaatttagtgaca-aattaaagag 15490069  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||| ||| ||||||||||||||    
T  15490068 ggatttcacgttttctctcactaaatttccctca 15490035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 21020198 - 21020065
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| ||||| ||||| ||||||||||||||  ||||||||||| || || |||||| |||||||| ||||||||||     
T  21020198 ctactaggaaaagcaaaattagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggttgcaaaatttagtgacggaattagagaa 21020099  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| |  ||||||||| ||||| | ||||||    
T  21020098 ggattttatgttttccctcactaaactgccctca 21020065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 36564441 - 36564574
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | |||  |||| |||||||||||||||||||| ||| ||| |||| || |||||| || ||||||||  ||||||||||    
T  36564441 ctactagaaaaagaaaaattagggaggaaaattagtgatggaaaaaataaaatccctgacagattctttggtcgcagaatttagtgacgaaattagagag 36564540  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||   |||||||| | ||||||||||||    
T  36564541 ggatttcatgctttccctcacaaaatttccctca 36564574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 1745490 - 1745612
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| ||||||||||||| | ||| ||||| ||||| ||||||| | |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  1745490 ctactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaa-tgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 1745588  T
Q  280 ggatttcacattttccctctctaa 303  Q
     ||||| || ||||||||| ||||    
T  1745589 agattttacgttttccctcactaa 1745612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 3461312 - 3461435
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||  ||||| |||||  ||||||||||||| |||||||||||  ||  |||||||| ||| |||| |||||||||||    
T  3461312 ctactagaaaaagcaaaattagcgaaggaaattagtgacagaaaaaataaaattcctcacaaatttcttgatcgcaaaatttaatgacggaattagagag 3461411  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  3461412 ggattttacgttttccctcactaa 3461435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 219 - 313
Target Start/End: Original strand, 20615384 - 20615478
Alignment:
Q  219 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||||  ||||||||||  || |||| |||| ||| ||||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  20615384 ggaaaaaataaaatatctcacaaattttttggtcgtaaaatttaatgacagaattagagaggaatttcacgttttccttctctaaatttccctca 20615478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 187 - 313
Target Start/End: Original strand, 29704041 - 29704167
Alignment:
Q  187 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 286  Q
    ||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   |  |||||||| |||||||| |||||| |||||||||||    
T  29704041 aaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttatgatcgcaaaatttagtgacggaattaaagagggatttc 29704140  T
Q  287 acattttccctctctaaatttccctca 313  Q
    || ||||| ||| | ||||||||||||    
T  29704141 acgttttctctcacaaaatttccctca 29704167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 8546378 - 8546265
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||| ||||||||||||||| | |||  |||| ||||| ||||||||| |||| ||||||||||||  |  |||||||| |||||||| |||||||||||    
T  8546378 ctaccagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatgatcgcaaaatttagtgacggaattagagag 8546279  T
Q  280 ggatttcacatttt 293  Q
    ||||||||| ||||    
T  8546278 ggatttcacgtttt 8546265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 273
Target Start/End: Original strand, 20761952 - 20762045
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatt 273  Q
    |||||||||||||||||||  | ||| ||||| ||||| ||||||||||||||  ||||||||||| || ||||||||| ||||||||||||||    
T  20761952 ctactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggtcgcaaaatttagtgacagaatt 20762045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 28859696 - 28859597
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||| ||||| ||||||||| |||| |||||||||||| || || |||||| |||||||| ||||||||||||||||| || |||| |||| ||||||||    
T  28859696 aaattagtgacggaaaaaatgaaattcctcacaaattccttggttgcaaaatttagtgacggaattagagagggattttacgttttacctcactaaattt 28859597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 188 - 303
Target Start/End: Original strand, 50665646 - 50665761
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| ||||| |||||   ||| |||||| ||||||| |||||||||||| ||  |||||||| ||||||||  ||||||||||||||||||    
T  50665646 aaaagcaaaattagagagggaaatttatgacggaaaacataaaattcctcacaaattctttgatcgcaaaatttagtgacgaaattagagagggatttca 50665745  T
Q  288 cattttccctctctaa 303  Q
      ||||||||| ||||    
T  50665746 tgttttccctcactaa 50665761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 8543597 - 8543469
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    |||||||| ||||||| | ||| ||||| ||||||||||||| | |||| ||| |||| ||   | ||||||||| ||| |||| |||||||||||||||    
T  8543597 tagaaaaaacaaaattagcgagggaaattagtgatggaaaaa-tgaaattcctaacaagtttcatggtcgcaaaatttaatgacggaattagagagggat 8543499  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    ||||| ||||||||| | ||||||||||||    
T  8543498 ttcacgttttccctcacaaaatttccctca 8543469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 10803854 - 10803721
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||||||||||| ||||| | ||| ||||| | ||| |||||||| | |||| |||||||||||  || ||||||||| ||| |||| |||||| |||    
T  10803854 ctactagaaaaagccaaattagggagggaaattaatgacggaaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttaatgacggaattaaaga 10803755  T
Q  279 gggatttcacattttccctctctaaatttccctc 312  Q
    || |||| || ||||||||| |||||||||||||    
T  10803754 ggaattttacgttttccctcactaaatttccctc 10803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 276
Target Start/End: Original strand, 6447248 - 6447344
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattaga 276  Q
    ||||||| |||||||||||| | ||| ||||| |||||||||||||||||||| |||| || |||| || ||| ||||  |||||||||||||||||    
T  6447248 ctactaggaaaagcaaaattagggagggaaattagtgatggaaaaaataaaattcctcgcagattctttggtctcaaagtttagtgacagaattaga 6447344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 21088875 - 21088758
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    ||||||||| || | ||| ||||| ||||| ||||||||||||||  ||||||||||| || ||||||||| ||  |||| ||||| |||||||||||||    
T  21088875 aaaagcaaagttagggagggaaattagtgacggaaaaaataaaat--ctcacaaattccttggtcgcaaaatttgatgacggaattcgagagggatttca 21088778  T
Q  288 cattttccctctctaaattt 307  Q
      ||||||||| ||||||||    
T  21088777 tgttttccctcactaaattt 21088758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 188 - 287
Target Start/End: Complemental strand, 37283648 - 37283549
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || |||  |||| |||||||| |||||||||||||||||||    
T  37283648 aaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcataaaatttagtgacggaattagagagggatttca 37283549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 47263267 - 47263394
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||||||||||   ||  |||||  ||||  |||||||| |||| |||||||||||| || ||||||||| ||||||||||| ||||| ||    
T  47263267 ctactagaaaaagcaaaattaacgaaggaaattggtgacagaaaaaattaaattcctcacaaattccttggtcgcaaaatttagtgacagagttagatag 47263366  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
      |||| || ||||||||| ||||||||    
T  47263367 aaattttacgttttccctcactaaattt 47263394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 6718815 - 6718725
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctc 298  Q
    |||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||| ||||||||||| |||||||||    
T  6718815 aaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagaaagggatttcacgttttccctc 6718725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 10772055 - 10772183
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    ||||||||||||| ||||||   ||| ||||| |||||  ||||||| |  ||| | |||||||||  |||||||||||| ||| ||||  |||||||||    
T  10772055 ctactagaaaaagtaaaattaacgagggaaattagtgacagaaaaaaatggaattcttcacaaattttttagtcgcaaaatttaatgacgaaattagaga 10772154  T
Q  279 gggatttcacattttccctctctaaattt 307  Q
    ||||||||| |||||||||| ||||||||    
T  10772155 gggatttcatattttccctcactaaattt 10772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 6088230 - 6088353
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||  |  || ||||| ||||| ||||||||| |||| ||||| |||||| || ||| ||||| ||| | || ||||||||||     
T  6088230 ctactagaaaaagcaaaataagtaagggaaattagtgacggaaaaaatgaaattcctcagaaattccttggtcacaaaatttaataacggaattagagat 6088329  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| || ||||||||| ||||    
T  6088330 ggattttacgttttccctcactaa 6088353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 26963326 - 26963388
Alignment:
Q  255 aaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctcattaa 317  Q
    |||| ||||| || |||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  26963326 aaaatttagtaacggaattagagaggaattttacattttccctcactaaatttccctcattaa 26963388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 308
Target Start/End: Complemental strand, 29451200 - 29451099
Alignment:
Q  207 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 306  Q
    ||||| ||||| ||||||||| ||||  |||| |||||| | ||| |||||| || | ||| ||||||||||||||||| || ||||||||| |||||||    
T  29451200 gaaattagtgacggaaaaaatgaaatttctcataaattcctcagttgcaaaattttgggacggaattagagagggattttacgttttccctcactaaatt 29451101  T
Q  307 tc 308  Q
    ||    
T  29451100 tc 29451099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 52769993 - 52769938
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||||||||||| ||||||| | | | ||||||||||||||||||||||    
T  52769993 aggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttcaaaaaa 52769938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 27182660 - 27182791
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||| ||||||| | ||| ||||| |||||   |||||||||||| |||||||||| | || ||| ||| | ||||||||  ||||||||||    
T  27182660 ctactaggaaaaacaaaattagggagggaaattagtgac--aaaaaataaaatccctcacaaatcccttggtcacaagatttagtgacgaaattagagag 27182757  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     ||||||   ||||||||| ||||||||| ||||    
T  27182758 agatttcttgttttccctcactaaatttctctca 27182791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 388
Target Start/End: Original strand, 29186517 - 29186563
Alignment:
Q  342 gttcgattctctttagtatcaatttggatagactaatttagcttctt 388  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  29186517 gttcgattctctttagtgtcaatttggatggactaatttaacttctt 29186563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 7973620 - 7973677
Alignment:
Q  338 ttaggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||||||| |  | ||||||||| | ||||||||||||||||||||||||    
T  7973620 ttaggttcgattctctctgatgtcaatttgggtggactaatttagcttcttcaaaaaa 7973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 393
Target Start/End: Original strand, 26988215 - 26988268
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaa 393  Q
    ||||||||||||||| |||||||||||||||   |||||||| |||||||||||    
T  26988215 aggttcgattctcttcagtatcaatttggatgagctaatttaacttcttcaaaa 26988268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 313
Target Start/End: Complemental strand, 20088492 - 20088400
Alignment:
Q  221 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||  |||| |||||| || ||| ||||| |||||||  |||||||||| ||||||||  |||| |||| ||||||||| ||||    
T  20088492 aaaaaataaaatttctcataaattctttggtcacaaaatttagtgatggaattagagaaggatttcatgttttgcctcactaaatttctctca 20088400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 8075137 - 8075082
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||| || |||| ||||||||| | | ||||||||||||||||||||||    
T  8075137 aggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttcaaaaaa 8075082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 13808895 - 13808840
Alignment:
Q  340 aggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||| ||||||| || | ||||||||||| || |||||||||||||||||||||    
T  13808895 aggttcaattctctctaatgtcaatttggatggattaatttagcttcttcaaaaaa 13808840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 307
Target Start/End: Original strand, 35579607 - 35579654
Alignment:
Q  260 ttagtgacagaattagagagggatttcacattttccctctctaaattt 307  Q
    |||||||| ||||||||||||||||| || ||||||||| ||||||||    
T  35579607 ttagtgacggaattagagagggattttacgttttccctcactaaattt 35579654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 50240851 - 50240772
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||| ||||| ||||||||||||||  |||| |||||| || | ||||||| ||||| ||| |||||||||| |||||||    
T  50240851 aaattagtgacggaaaaaataaaatctctcataaattccttggacgcaaaatttagtaacataattagagagagatttca 50240772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 13615544 - 13615427
Alignment:
Q  184 tagaaaaagcaaaattcg-agagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    |||||||||||||||| | | ||| |||| ||||| |||| ||||||||  |||||||||||  |||  ||||||| |||||||   ||||||||||| |    
T  13615544 tagaaaaagcaaaattaggaaagaaaaat-agtgacggaagaaataaaacccctcacaaatttcttaaccgcaaaatttagtgatgaaattagagaggaa 13615446  T
Q  283 tttcacattttccctctct 301  Q
    |||||| |||||| |||||    
T  13615445 tttcacgttttccttctct 13615427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 395
Target Start/End: Complemental strand, 16212965 - 16212927
Alignment:
Q  357 gtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  16212965 gtatcaatttggatggactaatttagcttcttaaaaaaa 16212927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 27711192 - 27711269
Alignment:
Q  202 agagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| ||| ||||| |||||||||||| | ||| ||||| |  || ||||||||| |||||||| |||||||||||    
T  27711192 agagaggaattagtgaaggaaaaaataaattcccttacaaactttttggtcgcaaaatttagtgacggaattagagag 27711269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 160365 - 160313
Alignment:
Q  343 ttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||| ||| || ||| ||| ||| ||||||||||||||||||||||||    
T  160365 ttcgattcttttttgtgtcagtttagatggactaatttagcttcttcaaaaaa 160313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 39976483 - 39976443
Alignment:
Q  135 tattgatttgggacttaggagtgtgctccttctcaaggtct 175  Q
    |||||| |||||||||  |||||||||||||||||||||||    
T  39976483 tattgacttgggacttgagagtgtgctccttctcaaggtct 39976443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 9231 - 9364
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||     
T  9231 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaa 9330  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  9331 ggattttacgttttccctcactaaatttccctca 9364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 74; Significance: 1e-33; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 3879 - 3746
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  3879 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 3780  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  3779 ggattttacgttttccctcactaaatttccctca 3746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 202911 - 202778
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| |||||||||||    
T  202911 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattgctcacaaattccttggtcgcaaaatttagtgacggaattagagag 202812  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | |||| || ||||||||| |||||||| |||||    
T  202811 gaattttacgttttccctcactaaattttcctca 202778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 276207 - 276269
Alignment:
Q  251 tcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||| |||||||| |||||||||||||||||||| ||||| ||| | ||||||||||||    
T  276207 tcgcaaaatttagtgacggaattagagagggatttcacgttttctctcacaaaatttccctca 276269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 274667 - 274732
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattc 245  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| | ||||||||||    
T  274667 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcttcacaaattc 274732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 22348 - 22221
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| | ||||||| |||| |||||||||||| |||||||||||| |||||||| |||||||||||    
T  22348 ctactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagag 22249  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || ||||||||| ||||||||    
T  22248 ggattttacgttttccctcactaaattt 22221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 5981 - 6114
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  5981 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 6080  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  6081 ggattttacgttttccctcactaaatttccctca 6114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 19740 - 19607
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  19740 ctactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19641  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| |||||| |||||||    
T  19640 ggatttcatgttttccctcactaaatatccctca 19607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 26620 - 26487
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||  ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  26620 ctactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 26521  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| |||||| |||||||    
T  26520 ggattttacgttttccctcactaaatgtccctca 26487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 120989 - 121122
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||| |||||| |||||| ||||| ||||| ||| ||| ||||||||||||  ||||||||||  || ||||||||| |||||||| |||||||||||    
T  120989 ctactaaaaaaagtaaaattagagagggaaattagttatgaaaaaaataaaatttctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 121088  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||| ||||||||||||||| ||||||||    
T  121089 ggatttcacgttttccctctctaaaattccctca 121122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 182 - 303
Target Start/End: Original strand, 84678 - 84799
Alignment:
Q  182 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 281  Q
    |||||||||||||||||| | ||| ||||| |||||  |||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||||    
T  84678 actagaaaaagcaaaattagtgagggaaattagtgacagaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagaggg 84777  T
Q  282 atttcacattttccctctctaa 303  Q
    |||| || ||||||||| ||||    
T  84778 attttacgttttccctcactaa 84799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 7592 - 7456
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||||||||| ||||||   |||  |||| ||||| ||||||||| |||| | ||||||| || |||||||||||  |||||||||||||||||||||    
T  7592 tactagaaaaagtaaaattaacgaggaaaattagtgacggaaaaaatgaaattcttcacaaaatccttagtcgcaaagtttagtgacagaattagagagg 7493  T
Q  281 gatttcacattttccctctctaaatttccctcattaa 317  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  7492 gatttcacgttttccctcactaaatttccctcattaa 7456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 183 - 307
Target Start/End: Original strand, 10668 - 10792
Alignment:
Q  183 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    ||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| |||||||||||| |||||||| |||||||||||| |    
T  10668 ctagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagaggaa 10767  T
Q  283 tttcacattttccctctctaaattt 307  Q
    ||| || ||||||||| ||||||||    
T  10768 ttttacgttttccctcactaaattt 10792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 7642 - 7509
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||| || |||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  7642 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagagag 7543  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    |||||| || ||||||||| ||||||||||||||    
T  7542 ggattttacgttttccctcactaaatttccctca 7509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 66; Significance: 7e-29; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 84440 - 84307
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||   | ||| ||||| |||||||| |||||||||||    
T  84440 ctactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcacaaaatttagtgacggaattagagag 84341  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||||||||||||| | ||||||||||||    
T  84340 ggatttcacattttccctcacaaaatttccctca 84307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 183 - 313
Target Start/End: Original strand, 8115 - 8245
Alignment:
Q  183 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    ||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| ||| |||||||| || ||||||||| |||||||| ||||||||||||||    
T  8115 ctagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctaacaaattccttggtcgcaaaatttagtgacggaattagagaggga 8214  T
Q  283 tttcacattttccctctctaaatttccctca 313  Q
    |||||  ||||||||| |||||| |||||||    
T  8215 tttcatgttttccctcactaaatatccctca 8245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 183 - 313
Target Start/End: Original strand, 21847 - 21977
Alignment:
Q  183 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    ||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| ||| |||||||| || ||||||||| |||||||| ||||||||||||||    
T  21847 ctagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctaacaaattccttggtcgcaaaatttagtgacggaattagagaggga 21946  T
Q  283 tttcacattttccctctctaaatttccctca 313  Q
    |||||  ||||||||| |||||| |||||||    
T  21947 tttcatgttttccctcactaaatatccctca 21977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 920 - 1054
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaa-aataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 278  Q
    |||||||||||||||||||| | ||| ||||| | ||| |||||| |||||||| ||||| |||||| || ||||||||| |||||||| ||||||||||    
T  920 ctactagaaaaagcaaaattagcgagggaaattactgacggaaaaaaataaaattcctcataaattccttggtcgcaaaatttagtgacggaattagaga 1019  T
Q  279 gggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||  ||||||||| |||||| |||||||    
T  1020 gggatttcatgttttccctcactaaatatccctca 1054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 10292 - 10162
Alignment:
Q  183 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 282  Q
    |||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| ||| |||||||| |||||||| ||||||||||||||    
T  10292 ctaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattctttaatcgcaaaatttagtgacggaattagagaggga 10193  T
Q  283 tttcacattttccctctctaaatttccctca 313  Q
    |||||  |||||||||  |||||||||||||    
T  10192 tttcatgttttccctcagtaaatttccctca 10162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 58719 - 58586
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  58719 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaaaaatttcttggtcgcaaaatttagtgacggaattagagag 58620  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| ||||||||||||||    
T  58619 ggatttcatgttttccctcactaaatttccctca 58586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 173 - 313
Target Start/End: Original strand, 74536 - 74676
Alignment:
Q  173 tcttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaat 272  Q
    |||||| ||||||| ||||| |||||| | ||| |||||  |||| |||||| ||||||| ||||| |||||  || ||||||||| |||||||| ||||    
T  74536 tcttacactactaggaaaagtaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaatttcttggtcgcaaaatttagtgacggaat 74635  T
Q  273 tagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||||||||||||  ||||||||| ||||||||||||||    
T  74636 tagagagggatttcatgttttccctcactaaatttccctca 74676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 14992 - 15119
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| |||||  |||||||| |||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  14992 ctactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagagag 15091  T
Q  280 ggatttcacattttccctctctaaattt 307  Q
    |||||| || ||||||||| ||||||||    
T  15092 ggattttacgttttccctcactaaattt 15119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 3e-25; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 182667 - 182544
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| |||||||||||    
T  182667 ctactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagag 182568  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| ||| |||||||| ||||    
T  182567 ggattttacaatttccctcactaa 182544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 305
Target Start/End: Complemental strand, 219773 - 219648
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||  ||||| ||||| ||||||||| |||| |||||||||||  ||| |||||||| ||||| || |||||||||||    
T  219773 ctactagaaaaagcaaaattagcgacggaaattagtgacggaaaaaatgaaattcctcacaaattttttaatcgcaaaatttagtaacggaattagagag 219674  T
Q  280 ggatttcacattttccctctctaaat 305  Q
    ||||||||  ||||||||| ||||||    
T  219673 ggatttcatgttttccctcactaaat 219648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 215665 - 215742
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaa 257  Q
    |||||| ||||||||||||| | ||||||||| || || ||||||||| |||| |||||||||||| || ||||||||    
T  215665 ctactaaaaaaagcaaaattagcgagagaaattagcgacggaaaaaatgaaattcctcacaaattccttggtcgcaaa 215742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 145965 - 145925
Alignment:
Q  135 tattgatttgggacttaggagtgtgctccttctcaaggtct 175  Q
    ||||| |||||||| ||||||||||||||||||| ||||||    
T  145965 tattggtttgggacctaggagtgtgctccttctcgaggtct 145925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 12789 - 12657
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||| |||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||| ||||||  | ||||||||| |||||||| |||||||||||    
T  12789 ctacttgaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcataaattctatggtcgcaaaatttagtgacggaattagagag 12690  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||| ||||| ||||||||| | ||||||||||||    
T  12689 gga-ttcacgttttccctcacaaaatttccctca 12657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 37789 - 37922
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||| ||||||| |   | ||||| ||||| |||||||||||||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  37789 ctactagaaaaaacaaaattagcaggggaaattagtgacggaaaaaataaaattcctcacaaattttatggtcgcaaaatttagtgacggaattagagag 37888  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    ||||||||  ||||||||| | ||||||||||||    
T  37889 ggatttcatgttttccctcacaaaatttccctca 37922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 44054 - 43921
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| | ||| ||||| ||||||||||||||| |||| |||||||||||| || ||||||||| ||| | || ||||||||||     
T  44054 ctactagaaaaagaaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaataacggaattagagaa 43955  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
    | |||| || ||||||||| |||||||| |||||    
T  43954 gaattttacgttttccctcactaaattttcctca 43921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 39705 - 39838
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    |||||||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||| ||||||   | || |||||| |||||||| |||||||||||    
T  39705 ctactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcccaaatttcatggttgcaaaatttagtgacggaattagagag 39804  T
Q  280 ggatttcacattttccctctctaaatttccctca 313  Q
     |||||||| |||||||||   ||||||||||||    
T  39805 agatttcacgttttccctcataaaatttccctca 39838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 3168 - 3295
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 283  Q
    ||||||||| |||||| | ||| ||||| ||||| |||||| ||||| | |||||||||||   | ||||||||| |||||||||||||||| |||||||    
T  3168 tagaaaaagaaaaattagggagggaaattagtgacggaaaagataaagttcctcacaaatttcatggtcgcaaaatttagtgacagaattagtgagggat 3267  T
Q  284 ttcacattttccctctctaaatttccctca 313  Q
    ||||| ||||||  ||||||||||||||||    
T  3268 ttcacgttttcc--ctctaaatttccctca 3295  T

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Target: scaffold0002 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 440100 - 439977
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 279  Q
    ||||||||||||| |||||| |  ||  | || ||||| ||||||||| |||| |||||||||||  ||  |||||||| |||||||| |||||||||||    
T  440100 ctactagaaaaagtaaaattagcaaggaatattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagagag 440001  T
Q  280 ggatttcacattttccctctctaa 303  Q
    |||||| |||||||||||| ||||    
T  440000 ggattttacattttccctcactaa 439977  T

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Target: scaffold0161 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 6931 - 6801
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    ||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| | || ||||||  || || |||||| ||| |||| ||||||||||||    
T  6931 tactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcttcgcaaatttcttcgttgcaaaatttaatgacggaattagagagg 6832  T
Q  281 gatttcacattttccctctctaaatttccct 311  Q
     ||||||  ||||||||| ||||||||||||    
T  6831 aatttcatgttttccctcactaaatttccct 6801  T

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Target: scaffold0035 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 74720 - 74826
Alignment:
Q  181 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 280  Q
    |||||||||| |||||||| |  || ||||| ||||| ||||||||| ||||  |||||||||||  | |||| |||| |||||||||||||||||||||    
T  74720 tactagaaaaggcaaaattagcaagggaaattagtgacggaaaaaatgaaatttctcacaaattctctggtcgtaaaatttagtgacagaattagagagg 74819  T
Q  281 gatttca 287  Q
    |||||||    
T  74820 gatttca 74826  T

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Target: scaffold0502 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 11021 - 10896
Alignment:
Q  188 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||||||||||| | ||  |||||  |||| | |||| ||||||| |||||||||||| || ||| ||||| ||||||||||||||||||||| ||||||    
T  11021 aaaagcaaaattagggaaggaaatttgtgacgaaaaatataaaattcctcacaaattccttggtcacaaaatttagtgacagaattagagaggaatttca 10922  T
Q  288 cattttccctctctaaatttccctca 313  Q
      |||| ||||  |||||||||||||    
T  10921 tgtttttcctcagtaaatttccctca 10896  T

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Target: scaffold0284 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 1549 - 1628
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||| ||||| |||||||||||||| ||||| |||||| || ||||||||| ||||| ||| |||||||||||| |||||    
T  1549 aaattagtgacggaaaaaataaaatccctcataaattccttggtcgcaaaatttagtaacataattagagaggggtttca 1628  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 17619 - 17705
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtga 266  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||  |||||||    
T  17619 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaactttagtga 17705  T

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Target: scaffold0300 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 4404 - 4461
Alignment:
Q  338 ttaggttcgattctctttagtatcaatttggatagactaatttagcttcttcaaaaaa 395  Q
    ||||||||||||| || |||| ||||||||| | ||||||||||||||||||||||||    
T  4404 ttaggttcgattccctctagtgtcaatttgggtggactaatttagcttcttcaaaaaa 4461  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 173578 - 173456
Alignment:
Q  184 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaa--ttcgttagtcgcaaaagttagtgacagaattagagaggg 281  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  |||| |||  ||| || ||||||||| |||||||| ||||||||||| |    
T  173578 tagaaaaagcaaaattagcgag-gaaattagtgacggaaaaaatgaaatttctcataaaaattctttggtcgcaaaatttagtgacggaattagagagtg 173480  T
Q  282 atttcacattttccctctctaaat 305  Q
    |||| |  ||||||||| ||||||    
T  173479 attttatgttttccctcactaaat 173456  T

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Target: scaffold0554 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 9947 - 9882
Alignment:
Q  180 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattc 245  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  |||||||||||    
T  9947 ctactagaaaaagcaaaattagcgagtgaaattagtgaaggaaaaaatgaaatttctcacaaattc 9882  T

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Target: scaffold0114 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 36411 - 36332
Alignment:
Q  208 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 287  Q
    |||| ||||| |||||||||||||| | ||| |||||| || ||| ||||| ||||| ||| |||||||||| |||||||    
T  36411 aaattagtgacggaaaaaataaaatccatcataaattccttggtcacaaaatttagtaacataattagagagagatttca 36332  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 112392 - 112332
Alignment:
Q  253 gcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 313  Q
    |||||| ||| |||| ||||||||||||||||| || |||| ||||||| ||||| |||||    
T  112392 gcaaaatttaatgacggaattagagagggatttaacgtttttcctctctgaattttcctca 112332  T

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