View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4865_low_14 (Length: 203)
Name: NF4865_low_14
Description: NF4865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4865_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 3158547 - 3158591
Alignment:
| Q |
7 |
agaataatttttaaaataaccaattcagtcaattctaaatttttc |
51 |
Q |
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| T |
3158547 |
agaataattttaaaaataaccaattcagtcaattctaaatttttc |
3158591 |
T |
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Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23850810 - 23850778
Alignment:
| Q |
1 |
aattttagaataatttttaaaataaccaattca |
33 |
Q |
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||||||||||||||||| ||||||||||||||| |
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| T |
23850810 |
aattttagaataattttaaaaataaccaattca |
23850778 |
T |
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