View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4867-Insertion-1 (Length: 981)

Name: NF4867-Insertion-1
Description: NF4867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4867-Insertion-1
NF4867-Insertion-1
[»] chr7 (59 HSPs)
chr7 (705-824)||(25106366-25106486)
chr7 (355-473)||(25105991-25106109)
chr7 (162-230)||(25104826-25104894)
chr7 (77-130)||(25104738-25104791)
chr7 (421-495)||(6579615-6579689)
chr7 (422-494)||(21136829-21136900)
chr7 (422-494)||(37495909-37495981)
chr7 (424-495)||(21105603-21105674)
chr7 (420-495)||(21164748-21164823)
chr7 (281-351)||(25104970-25105041)
chr7 (420-472)||(8879760-8879812)
chr7 (423-495)||(21322174-21322246)
chr7 (426-482)||(44941416-44941472)
chr7 (424-495)||(23221392-23221463)
chr7 (413-471)||(429192-429250)
chr7 (421-491)||(29726797-29726867)
chr7 (424-493)||(19599145-19599214)
chr7 (422-495)||(21554924-21554997)
chr7 (422-495)||(22564132-22564205)
chr7 (419-472)||(28012627-28012680)
chr7 (422-495)||(28200375-28200448)
chr7 (422-470)||(36428146-36428194)
chr7 (422-473)||(5317300-5317351)
chr7 (422-495)||(10242479-10242551)
chr7 (421-492)||(19626518-19626589)
chr7 (418-492)||(33671556-33671630)
chr7 (421-492)||(34448603-34448674)
chr7 (418-489)||(44651599-44651670)
chr7 (425-492)||(47342427-47342494)
chr7 (423-470)||(48007562-48007609)
chr7 (421-495)||(3584201-3584275)
chr7 (421-495)||(6023306-6023380)
chr7 (421-495)||(7388029-7388103)
chr7 (421-495)||(10025991-10026065)
chr7 (421-483)||(10244724-10244786)
chr7 (421-495)||(14046601-14046675)
chr7 (421-495)||(14356631-14356705)
chr7 (428-470)||(17853167-17853209)
chr7 (421-495)||(19416511-19416585)
chr7 (424-470)||(22991406-22991452)
chr7 (421-495)||(27462426-27462500)
chr7 (421-463)||(32263004-32263046)
chr7 (421-495)||(35142139-35142213)
chr7 (421-491)||(36755012-36755081)
chr7 (421-491)||(36760809-36760878)
chr7 (421-470)||(5041336-5041385)
chr7 (421-470)||(8883550-8883599)
chr7 (421-494)||(17883885-17883958)
chr7 (450-495)||(18023705-18023750)
chr7 (418-483)||(27068159-27068224)
chr7 (418-483)||(27210089-27210154)
chr7 (423-472)||(27263340-27263389)
chr7 (423-472)||(27270234-27270283)
chr7 (423-492)||(29053042-29053111)
chr7 (418-495)||(30467975-30468052)
chr7 (421-458)||(38025146-38025183)
chr7 (425-470)||(39043756-39043801)
chr7 (450-495)||(42227795-42227840)
chr7 (421-486)||(48103673-48103738)
[»] chr1 (52 HSPs)
chr1 (418-495)||(3777712-3777789)
chr1 (421-495)||(1091176-1091250)
chr1 (422-495)||(24978242-24978315)
chr1 (421-464)||(6094419-6094462)
chr1 (424-495)||(7454568-7454639)
chr1 (421-495)||(30678803-30678877)
chr1 (425-495)||(52262156-52262226)
chr1 (422-495)||(16967184-16967257)
chr1 (421-493)||(37037344-37037417)
chr1 (416-464)||(50849094-50849142)
chr1 (424-495)||(17669645-17669716)
chr1 (421-492)||(41769808-41769879)
chr1 (427-494)||(44724925-44724992)
chr1 (421-495)||(27533240-27533314)
chr1 (416-470)||(29800525-29800579)
chr1 (421-495)||(31338016-31338090)
chr1 (421-495)||(34632166-34632240)
chr1 (418-492)||(39387784-39387858)
chr1 (421-495)||(48681923-48681997)
chr1 (422-495)||(10356173-10356246)
chr1 (418-495)||(28832161-28832238)
chr1 (418-495)||(32962557-32962634)
chr1 (423-472)||(47719120-47719169)
chr1 (424-492)||(2994758-2994826)
chr1 (421-493)||(8266178-8266250)
chr1 (418-493)||(29450973-29451049)
chr1 (424-492)||(32560973-32561041)
chr1 (422-470)||(34766858-34766906)
chr1 (421-492)||(4295231-4295302)
chr1 (421-484)||(7803402-7803465)
chr1 (422-493)||(12212293-12212364)
chr1 (423-470)||(16580814-16580861)
chr1 (424-495)||(33153870-33153941)
chr1 (418-464)||(14768800-14768846)
chr1 (421-495)||(17139507-17139581)
chr1 (421-483)||(27172724-27172786)
chr1 (421-491)||(29506824-29506894)
chr1 (421-459)||(37573317-37573355)
chr1 (410-444)||(40535227-40535261)
chr1 (422-495)||(48646715-48646789)
chr1 (421-495)||(52043270-52043344)
chr1 (424-465)||(619428-619469)
chr1 (421-494)||(3431327-3431400)
chr1 (424-473)||(8253739-8253788)
chr1 (418-479)||(15382825-15382886)
chr1 (450-495)||(16966962-16967007)
chr1 (422-479)||(35473950-35474007)
chr1 (418-463)||(37014201-37014246)
chr1 (422-495)||(39252247-39252320)
chr1 (421-470)||(42045387-42045436)
chr1 (421-470)||(49875614-49875663)
chr1 (421-470)||(52441526-52441575)
[»] chr4 (59 HSPs)
chr4 (427-494)||(41520957-41521024)
chr4 (425-495)||(48171882-48171952)
chr4 (421-495)||(17728079-17728153)
chr4 (421-495)||(23809946-23810020)
chr4 (425-495)||(31760247-31760317)
chr4 (421-495)||(43034332-43034406)
chr4 (421-465)||(54151645-54151689)
chr4 (421-464)||(5185125-5185168)
chr4 (424-495)||(19908692-19908763)
chr4 (424-483)||(47704582-47704641)
chr4 (421-495)||(9946424-9946498)
chr4 (425-495)||(11949753-11949823)
chr4 (421-495)||(21318243-21318317)
chr4 (421-495)||(24664981-24665055)
chr4 (421-495)||(30380527-30380601)
chr4 (429-495)||(34969383-34969449)
chr4 (421-495)||(42845022-42845096)
chr4 (421-494)||(22630351-22630424)
chr4 (418-495)||(25783145-25783222)
chr4 (422-491)||(40070962-40071031)
chr4 (427-495)||(836225-836293)
chr4 (415-463)||(7490359-7490407)
chr4 (421-465)||(16733539-16733583)
chr4 (418-494)||(23686290-23686366)
chr4 (424-492)||(30847975-30848043)
chr4 (421-485)||(37193246-37193310)
chr4 (421-465)||(51286449-51286493)
chr4 (421-492)||(6610260-6610331)
chr4 (421-492)||(14202472-14202543)
chr4 (416-495)||(19588146-19588225)
chr4 (424-491)||(25115049-25115116)
chr4 (424-495)||(30135140-30135211)
chr4 (424-479)||(43027292-43027347)
chr4 (421-495)||(2430994-2431068)
chr4 (424-470)||(6087747-6087793)
chr4 (425-495)||(8415485-8415555)
chr4 (421-463)||(23626378-23626420)
chr4 (418-464)||(32923251-32923297)
chr4 (421-483)||(39171372-39171434)
chr4 (421-495)||(42344608-42344682)
chr4 (421-483)||(50362141-50362203)
chr4 (421-471)||(51002284-51002334)
chr4 (422-480)||(55421574-55421632)
chr4 (421-470)||(2186348-2186397)
chr4 (419-464)||(6459945-6459990)
chr4 (421-470)||(7030908-7030957)
chr4 (418-495)||(8027387-8027464)
chr4 (450-495)||(11085755-11085800)
chr4 (430-495)||(19997354-19997419)
chr4 (421-470)||(20096285-20096334)
chr4 (421-482)||(23318364-23318425)
chr4 (421-494)||(32006497-32006570)
chr4 (421-490)||(36035831-36035900)
chr4 (422-491)||(43155077-43155146)
chr4 (422-471)||(44857200-44857249)
chr4 (421-470)||(46745187-46745236)
chr4 (422-483)||(47490709-47490770)
chr4 (421-470)||(52270045-52270094)
chr4 (418-495)||(54500563-54500640)
[»] chr6 (29 HSPs)
chr6 (421-495)||(29283812-29283886)
chr6 (421-494)||(32053785-32053858)
chr6 (421-495)||(13583546-13583620)
chr6 (422-495)||(8629686-8629759)
chr6 (418-470)||(20381124-20381176)
chr6 (421-495)||(788863-788937)
chr6 (421-495)||(9444954-9445028)
chr6 (418-479)||(1918464-1918525)
chr6 (419-495)||(10018395-10018470)
chr6 (421-465)||(17382081-17382125)
chr6 (424-472)||(28757037-28757085)
chr6 (421-473)||(28951396-28951448)
chr6 (421-473)||(31140824-31140876)
chr6 (418-465)||(2108719-2108766)
chr6 (421-492)||(9311923-9311994)
chr6 (421-492)||(20744135-20744206)
chr6 (421-492)||(27829595-27829666)
chr6 (419-494)||(32524411-32524486)
chr6 (421-471)||(331900-331950)
chr6 (421-483)||(1989045-1989106)
chr6 (424-470)||(5925320-5925366)
chr6 (425-495)||(9977058-9977128)
chr6 (421-483)||(24349541-24349603)
chr6 (415-465)||(28363495-28363545)
chr6 (421-483)||(31971526-31971588)
chr6 (424-465)||(361754-361795)
chr6 (421-470)||(4494886-4494935)
chr6 (421-494)||(13654221-13654294)
chr6 (419-472)||(33938692-33938745)
[»] chr5 (48 HSPs)
chr5 (421-494)||(5107236-5107309)
chr5 (414-494)||(27903103-27903183)
chr5 (421-492)||(2839795-2839866)
chr5 (412-495)||(15889399-15889482)
chr5 (421-494)||(11637563-11637636)
chr5 (418-483)||(22538824-22538889)
chr5 (422-479)||(31545869-31545926)
chr5 (421-470)||(33645704-33645753)
chr5 (422-495)||(41650930-41651002)
chr5 (427-495)||(12159391-12159459)
chr5 (419-495)||(13864339-13864415)
chr5 (419-465)||(17046329-17046375)
chr5 (421-495)||(20175722-20175796)
chr5 (437-495)||(26913103-26913161)
chr5 (421-495)||(29695012-29695086)
chr5 (421-495)||(39980505-39980579)
chr5 (418-495)||(8544979-8545056)
chr5 (422-495)||(29561545-29561618)
chr5 (422-495)||(37614417-37614490)
chr5 (424-489)||(38495142-38495207)
chr5 (421-482)||(43358257-43358318)
chr5 (423-483)||(866029-866089)
chr5 (423-479)||(3671217-3671273)
chr5 (423-495)||(20258544-20258616)
chr5 (424-495)||(1538798-1538869)
chr5 (424-491)||(16076431-16076498)
chr5 (404-470)||(16133080-16133147)
chr5 (423-482)||(27679497-27679556)
chr5 (418-465)||(31877922-31877969)
chr5 (421-492)||(40837896-40837967)
chr5 (423-465)||(8902796-8902838)
chr5 (418-464)||(11694579-11694625)
chr5 (417-495)||(13796323-13796401)
chr5 (421-495)||(16701571-16701645)
chr5 (425-471)||(19068453-19068499)
chr5 (421-495)||(22522791-22522865)
chr5 (418-464)||(26034629-26034675)
chr5 (418-492)||(32622889-32622962)
chr5 (418-464)||(40027785-40027831)
chr5 (425-479)||(43108570-43108624)
chr5 (424-465)||(1745979-1746020)
chr5 (450-495)||(3052305-3052350)
chr5 (422-471)||(10032288-10032337)
chr5 (421-470)||(18589882-18589931)
chr5 (418-463)||(29178441-29178486)
chr5 (422-494)||(29904418-29904491)
chr5 (434-495)||(37021362-37021423)
chr5 (421-470)||(37932327-37932376)
[»] chr2 (47 HSPs)
chr2 (418-495)||(20990894-20990971)
chr2 (424-492)||(13100257-13100325)
chr2 (419-495)||(31815877-31815953)
chr2 (418-492)||(29599933-29600007)
chr2 (421-494)||(36615024-36615097)
chr2 (427-495)||(25395432-25395500)
chr2 (420-495)||(27848153-27848229)
chr2 (421-491)||(14414886-14414959)
chr2 (418-465)||(17142824-17142871)
chr2 (424-495)||(23250310-23250381)
chr2 (424-495)||(36264469-36264540)
chr2 (425-495)||(5168569-5168639)
chr2 (421-495)||(10723936-10724010)
chr2 (421-495)||(22523002-22523076)
chr2 (421-495)||(31543009-31543083)
chr2 (421-495)||(31837926-31838000)
chr2 (421-495)||(41939098-41939172)
chr2 (421-470)||(2256968-2257017)
chr2 (424-489)||(34376886-34376951)
chr2 (421-470)||(34977201-34977250)
chr2 (434-491)||(35281205-35281262)
chr2 (421-465)||(5676736-5676780)
chr2 (413-465)||(6471255-6471307)
chr2 (427-495)||(9547399-9547467)
chr2 (419-495)||(20565065-20565141)
chr2 (423-479)||(37320523-37320579)
chr2 (421-492)||(346117-346188)
chr2 (424-495)||(4238759-4238830)
chr2 (424-483)||(4897543-4897602)
chr2 (424-483)||(4944937-4944996)
chr2 (421-492)||(28874545-28874616)
chr2 (418-481)||(31166111-31166174)
chr2 (412-463)||(41165423-41165474)
chr2 (421-479)||(6723083-6723141)
chr2 (421-471)||(9383223-9383273)
chr2 (421-495)||(14735883-14735957)
chr2 (421-495)||(21482509-21482583)
chr2 (424-470)||(27152353-27152399)
chr2 (421-495)||(28439559-28439633)
chr2 (421-463)||(40257181-40257223)
chr2 (421-495)||(43067663-43067737)
chr2 (437-494)||(660813-660870)
chr2 (418-463)||(2661070-2661115)
chr2 (422-495)||(24579658-24579731)
chr2 (450-495)||(24581007-24581052)
chr2 (424-465)||(36547255-36547296)
chr2 (422-483)||(40967373-40967434)
[»] scaffold0021 (1 HSPs)
scaffold0021 (424-495)||(161141-161212)
[»] chr8 (45 HSPs)
chr8 (421-487)||(7553676-7553742)
chr8 (425-471)||(8984508-8984554)
chr8 (421-483)||(13357443-13357505)
chr8 (418-495)||(24023698-24023775)
chr8 (421-470)||(37999435-37999484)
chr8 (421-493)||(10152453-10152525)
chr8 (422-482)||(10982724-10982784)
chr8 (423-495)||(15001265-15001337)
chr8 (415-495)||(19163526-19163606)
chr8 (423-495)||(39138988-39139060)
chr8 (422-472)||(12249498-12249548)
chr8 (421-491)||(14303162-14303232)
chr8 (425-495)||(30417600-30417670)
chr8 (429-495)||(37141362-37141428)
chr8 (421-494)||(11708983-11709056)
chr8 (422-495)||(27134410-27134483)
chr8 (421-494)||(27718885-27718958)
chr8 (421-494)||(28084279-28084351)
chr8 (421-470)||(33451364-33451413)
chr8 (414-495)||(34420852-34420933)
chr8 (408-489)||(40482323-40482404)
chr8 (430-495)||(43778025-43778090)
chr8 (423-495)||(14279561-14279633)
chr8 (423-479)||(36919310-36919366)
chr8 (418-486)||(42700499-42700567)
chr8 (424-483)||(32421569-32421628)
chr8 (421-483)||(8717477-8717539)
chr8 (421-479)||(10732781-10732839)
chr8 (441-495)||(12061604-12061658)
chr8 (415-465)||(13004156-13004206)
chr8 (421-495)||(29376898-29376972)
chr8 (421-491)||(37938492-37938562)
chr8 (419-464)||(1342721-1342766)
chr8 (421-470)||(1877677-1877726)
chr8 (421-470)||(2188543-2188592)
chr8 (422-495)||(3650518-3650591)
chr8 (421-470)||(6447186-6447235)
chr8 (426-483)||(18959151-18959208)
chr8 (421-494)||(21557430-21557503)
chr8 (418-495)||(28580938-28581015)
chr8 (426-495)||(32944830-32944899)
chr8 (430-495)||(33996075-33996140)
chr8 (426-495)||(40167324-40167393)
chr8 (450-495)||(41472504-41472549)
chr8 (416-465)||(44224216-44224265)
[»] chr3 (49 HSPs)
chr3 (425-495)||(40520753-40520823)
chr3 (423-495)||(51882190-51882262)
chr3 (424-495)||(552174-552245)
chr3 (421-492)||(16980347-16980418)
chr3 (424-495)||(38130949-38131020)
chr3 (421-495)||(7464481-7464555)
chr3 (415-465)||(21967547-21967597)
chr3 (415-465)||(21989983-21990033)
chr3 (425-483)||(28148470-28148528)
chr3 (421-495)||(30050418-30050492)
chr3 (416-470)||(33771682-33771736)
chr3 (421-487)||(46903905-46903971)
chr3 (421-491)||(49082703-49082773)
chr3 (418-483)||(32651638-32651703)
chr3 (422-483)||(47377351-47377412)
chr3 (418-495)||(48849753-48849829)
chr3 (422-495)||(50037309-50037382)
chr3 (418-470)||(10843796-10843848)
chr3 (423-479)||(27397618-27397674)
chr3 (421-465)||(51250253-51250297)
chr3 (424-495)||(1707738-1707809)
chr3 (421-492)||(4332660-4332731)
chr3 (422-465)||(7974532-7974575)
chr3 (421-492)||(21628881-21628952)
chr3 (421-492)||(42372517-42372588)
chr3 (418-465)||(43796857-43796904)
chr3 (421-492)||(48315017-48315088)
chr3 (416-495)||(48944346-48944424)
chr3 (421-464)||(53633638-53633681)
chr3 (418-484)||(2078234-2078300)
chr3 (421-482)||(12043099-12043161)
chr3 (421-483)||(16792976-16793038)
chr3 (424-470)||(19468451-19468497)
chr3 (421-495)||(22722399-22722473)
chr3 (421-495)||(25340914-25340988)
chr3 (425-495)||(29631187-29631257)
chr3 (421-495)||(29687079-29687153)
chr3 (424-470)||(37465360-37465406)
chr3 (418-492)||(40715325-40715399)
chr3 (421-495)||(45309133-45309207)
chr3 (422-492)||(52337339-52337409)
chr3 (421-470)||(2105713-2105762)
chr3 (421-470)||(7557549-7557598)
chr3 (438-495)||(8136622-8136679)
chr3 (421-470)||(10498710-10498759)
chr3 (422-491)||(21549036-21549105)
chr3 (418-495)||(32909291-32909368)
chr3 (430-495)||(48022304-48022369)
chr3 (418-487)||(49710714-49710783)
[»] scaffold0118 (2 HSPs)
scaffold0118 (421-483)||(39995-40057)
scaffold0118 (421-495)||(40307-40382)
[»] scaffold0122 (1 HSPs)
scaffold0122 (418-495)||(14176-14253)
[»] scaffold0040 (2 HSPs)
scaffold0040 (421-470)||(56781-56830)
scaffold0040 (421-490)||(58850-58919)
[»] scaffold0011 (1 HSPs)
scaffold0011 (426-495)||(7724-7793)
[»] scaffold0027 (1 HSPs)
scaffold0027 (423-495)||(61560-61632)
[»] scaffold0015 (1 HSPs)
scaffold0015 (422-492)||(75181-75252)
[»] scaffold0126 (1 HSPs)
scaffold0126 (413-479)||(34894-34960)
[»] scaffold0262 (1 HSPs)
scaffold0262 (421-470)||(15945-15994)
[»] scaffold0035 (1 HSPs)
scaffold0035 (421-494)||(73511-73584)
[»] scaffold0009 (1 HSPs)
scaffold0009 (422-463)||(63642-63683)
[»] scaffold0007 (1 HSPs)
scaffold0007 (421-470)||(1568-1617)


Alignment Details
Target: chr7 (Bit Score: 84; Significance: 2e-39; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 705 - 824
Target Start/End: Original strand, 25106366 - 25106486
Alignment:
Q  705 aggaagagctctaggtttacactcaaaccccctcatggtgcaattatttttgtccgttcttataagttataatccaccaaatnnnnnnncaaaagattat 804  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||    
T  25106366 aggaagagctttaggtttacactcaaaccccctcatggtgcaattatttttgtccgttcttataagttataatccaccaaataaaaaaacaaaagattat 25106465  T
Q  805 gctaactt-ttttccaagtgc 824  Q
    |||||||| | ||||||||||    
T  25106466 gctaacttatattccaagtgc 25106486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 355 - 473
Target Start/End: Original strand, 25105991 - 25106109
Alignment:
Q  355 gtaattaattgaagttgatatatcaatttaaagcaaacaaacgacataataaaacataaaatcgttctcgtgagcttaactcagttggtattgataatgt 454  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||  ||| || |||||||||  | ||| |    
T  25105991 gtaattaattgaagttgatatatcaatttaaacaaaacaaacgacataataaaacataaaatcgtgctcgtgaatttatcttagttggtatgaacaatat 25106090  T
Q  455 ataatatatgcgaggttca 473  Q
    ||||||||||| |||||||    
T  25106091 ataatatatgcaaggttca 25106109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 25104826 - 25104894
Alignment:
Q  162 ttcattcaaattgttaaaatacatggtaaacaacaaaaattcaacagttaaaactgaattgaagtaatt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  25104826 ttcattcaaattgttaaaatacatggtaaacaacaaaaattcaacggttaaaattgaattgaagtaatt 25104894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 25104738 - 25104791
Alignment:
Q  77 aataaacaaatcaatgtgcgattctttttctggatgaaataaaacattccttca 130  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  25104738 aataaacaaatcaatatgcgattctttttctcgatgaaataaaacattccttca 25104791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 6579615 - 6579689
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||| ||||||| || ||||||||| |||||| ||||  ||||||||||| |||||||||||    
T  6579615 ctcgtgagcttaactcaattggtatggacaatgtataaaatatgcaaggtgtaaggttcaaaccccgaccaccac 6579689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 422 - 494
Target Start/End: Original strand, 21136829 - 21136900
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||||||||||||||||||| || |||||||||||||||| |||||  |||||||||  ||||||||||    
T  21136829 tcgtgagcttaactcagttggtatggacaatgtataatatatgcaaggtt-gaggttcaaatcccgaccacca 21136900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 422 - 494
Target Start/End: Complemental strand, 37495981 - 37495909
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||||||||| | ||| ||||||||||| ||||||||||| |||| |||||||||||  ||||||||||    
T  37495981 tcgtgagcttaacttaattgatattgataatgcataatatatgcaaggtccaaggttcaaatcccgaccacca 37495909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 21105603 - 21105674
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||| |||||||||||| || |||| ||||||||||| |||||| |||||| ||| |||||||||||    
T  21105603 gtgagcttagctcagttggtatggaaaatgcataatatatgcaaggttcgaggttcgaaccccgaccaccac 21105674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 420 - 495
Target Start/End: Complemental strand, 21164823 - 21164748
Alignment:
Q  420 tctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||||| ||||||| |||||||||   |||||  ||||| |||||| |||||||||    
T  21164823 tctcgtgagcttaactcagttggtatggataatgcataatatatataaggtttgaggtttaaactctgaccaccac 21164748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 25104970 - 25105041
Alignment:
Q  281 tataaatctaccaaaattaaagtggtcgaaatattgatatttgtaat-ttaatgcccaaattattaattgaa 351  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||||||  ||||| | |||||||||||||||    
T  25104970 tataaatctgccagaattaaagtggtcgatatattgatatttgtaatagtaatgtctaaattattaattgaa 25105041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 8879812 - 8879760
Alignment:
Q  420 tctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttc 472  Q
    |||||||||||||||||||||||||| || |||| ||||||||||| ||||||    
T  8879812 tctcgtgagcttaactcagttggtatagacaatgcataatatatgcaaggttc 8879760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 495
Target Start/End: Original strand, 21322174 - 21322246
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||  ||||||| ||||| ||||| |||| || ||||||||| ||| |||||||    
T  21322174 cgtgagcttaactcagttggtaaggataatgcataatgtatgcaaggtccagggttcaaaccccggccaccac 21322246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 482
Target Start/End: Complemental strand, 44941472 - 44941416
Alignment:
Q  426 gagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaa 482  Q
    |||||||||||||||||||  ||||||| ||||||||||| ||||| ||||||||||    
T  44941472 gagcttaactcagttggtagggataatgcataatatatgcaaggtttaaggttcaaa 44941416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 23221392 - 23221463
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||  || |||| ||||||||||  ||||||  |||||||||||| ||||||||    
T  23221392 gtgagcttaactcagttggtagagacaatgcataatatatgtaaggttcgtggttcaaactccaaccaccac 23221463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 429250 - 429192
Alignment:
Q  413 aaatcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggtt 471  Q
    |||| |||||||||||||||||||||||| ||| ||||||  ||||||||||| |||||    
T  429250 aaattgttctcgtgagcttaactcagttgatatggataatacataatatatgcaaggtt 429192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 29726797 - 29726867
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    |||||||||||||||||||||  ||  | |||||||||||||||| ||||||  ||||||||| |||||||    
T  29726797 ctcgtgagcttaactcagttgacatgaacaatgtataatatatgcaaggttcggggttcaaaccccgacca 29726867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 493
Target Start/End: Original strand, 19599145 - 19599214
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacc 493  Q
    ||||| |||||||||||||||| || |||| ||||||||||| |||| |  ||||||||| |||||||||    
T  19599145 gtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 21554997 - 21554924
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||| ||||||||  |||||||  |||||||||| |||| || | ||||||| |||||||||||    
T  21554997 tcgtgagcttaacttagttggtagggataatgcttaatatatgcaaggtccaggattcaaaccccgaccaccac 21554924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 22564205 - 22564132
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||| |||||||||||||||   |||||   |||||||||| | ||||||||||||||||| |||||||||    
T  22564205 tcgtgagtttaactcagttggtaggaataatacgtaatatatgcaaagttcaaggttcaaactctgaccaccac 22564132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 472
Target Start/End: Complemental strand, 28012680 - 28012627
Alignment:
Q  419 ttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttc 472  Q
    ||||||||||||||||||||||||||  || |||| |||||||||| |||||||    
T  28012680 ttctcgtgagcttaactcagttggtaaggacaatgcataatatatgggaggttc 28012627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 28200448 - 28200375
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||   | |||  ||||||||||| |  ||| ||||||||||||||||||||||    
T  28200448 tcgtgagcttaactcagttggtaggaacaatacataatatatgcaaaattcgaggttcaaactccgaccaccac 28200375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 36428146 - 36428194
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||||||||||||||| || ||||||||| |||||| ||||    
T  36428146 tcgtgagcttaactcagttggtatggacaatgtataaaatatgcaaggt 36428194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 473
Target Start/End: Complemental strand, 5317351 - 5317300
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttca 473  Q
    |||||||||||||||||||| ||| || |||| ||||||||||| |||||||    
T  5317351 tcgtgagcttaactcagttgatatggaaaatgcataatatatgcaaggttca 5317300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 495
Target Start/End: Original strand, 10242479 - 10242551
Alignment:
Q  422 tcgtgagcttaactcagttggtattgat-aatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||  ||| |||| ||||||||||| |||| || ||||||||| |||| ||||||    
T  10242479 tcgtgagcttaactcagttggta--gataaatgcataatatatgcaaggtccagggttcaaaccccgatcaccac 10242551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 19626589 - 19626518
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||||||||||||||||||| | || |||| ||||||||||| |||| |  ||||||||| ||| ||||    
T  19626589 ctcgtgagcttaactcagttggtttggacaatgcataatatatgcaaggtccggggttcaaacaccggccac 19626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 418 - 492
Target Start/End: Complemental strand, 33671630 - 33671556
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtat-aatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||||||||||||||||| |  |||||| || || |||||| |||||| |||||||||| ||||||||    
T  33671630 gttctcgtgagcttaactcagttggt-tgaataatgcataaaaatatgcaaggttcgaggttcaaaccccgaccac 33671556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 34448674 - 34448603
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||||||||||||||||||| | || |||| ||||||||||  |||| || ||||||||| | ||||||    
T  34448674 ctcgtgagcttaactcagttggtttggacaatgcataatatatgtaaggtccagggttcaaaccctgaccac 34448603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 418 - 489
Target Start/End: Original strand, 44651599 - 44651670
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgac 489  Q
    |||||||||||| || |||| ||| || ||| |||| ||||||||||| |||||| | ||||||||||||||    
T  44651599 gttctcgtgagcatagctcaattgataatgacaatgcataatatatgcaaggttcgaagttcaaactccgac 44651670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 47342494 - 47342427
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||||||||||||||| | || |||| ||||||||||| |||| |   |||||||||||||||||    
T  47342494 tgagcttaactcagttggtttggacaatgcataatatatgcaaggtccggagttcaaactccgaccac 47342427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 48007609 - 48007562
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||||||||||||| ||| |||| ||||||||||| ||||    
T  48007609 cgtgagcttaactcagttggtaatgacaatgcataatatatgcaaggt 48007562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 3584201 - 3584275
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| |||||||||| ||||||||  || |||| ||||||||||| |||| | || ||||||| |||||||||||    
T  3584201 ctcgcgagcttaacttagttggtaaggacaatgcataatatatgcaaggtacgagattcaaaccccgaccaccac 3584275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 6023306 - 6023380
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||| | || ||||  ||| |||||| ||||||  ||||||||| |||||||||||    
T  6023306 ctcgtgagcttagctcagttggtttggacaatgcttaaaatatgcaaggttcggggttcaaaccccgaccaccac 6023380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 7388103 - 7388029
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||   || |||| ||||||||||  ||||||  | ||||||| |||||||||||    
T  7388103 ctcgtgagcttaactcagttggttgggacaatgcataatatatgtaaggttcgggattcaaaccccgaccaccac 7388029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 10025991 - 10026065
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||| | || |||| |||| |||||| ||||    ||||||||| |||||||||||    
T  10025991 ctcgtgagcttaactcagttggtttggacaatgcataaaatatgcaaggtatggggttcaaaccccgaccaccac 10026065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Original strand, 10244724 - 10244786
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| |||| |  |||||||||    
T  10244724 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaac 10244786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 14046675 - 14046601
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| | ||||| ||||||||||| || | |  ||||||||| ||| |||||||    
T  14046675 ctcgtgagcttatctcagttggtatgggtaatgcataatatatgcaagatacggggttcaaaccccggccaccac 14046601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 14356705 - 14356631
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| | ||||| ||||||||||| || | |  ||||||||| ||| |||||||    
T  14356705 ctcgtgagcttatctcagttggtatgggtaatgcataatatatgcaagatacggggttcaaaccccggccaccac 14356631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 428 - 470
Target Start/End: Original strand, 17853167 - 17853209
Alignment:
Q  428 gcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||    
T  17853167 gcttagctcaattggtattgataatgtataatatatgcaaggt 17853209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 19416511 - 19416585
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| || |||| |||| |||||| |||| |  ||||||||| ||| |||||||    
T  19416511 ctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 19416585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 424 - 470
Target Start/End: Complemental strand, 22991452 - 22991406
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||||||||||||| || |||| ||||||||||| ||||    
T  22991452 gtgagcttaactcagttggtatggacaatgcataatatatgcaaggt 22991406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 27462500 - 27462426
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||| || |||||||||||| || |||| ||||||||||| |||| |  ||||||||| ||| |||||||    
T  27462500 ctcgtgagcatagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 27462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 463
Target Start/End: Original strand, 32263004 - 32263046
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatat 463  Q
    |||||||||||| |||||||||||| || ||||||||||||||    
T  32263004 ctcgtgagcttagctcagttggtatagacaatgtataatatat 32263046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 35142213 - 35142139
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||| ||| || |||| ||||||||||| | |||  |||||| ||| |||||||||||    
T  35142213 ctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaagtttgaggttcgaaccccgaccaccac 35142139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 36755012 - 36755081
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    ||||||||||||||||||||||||  || |||| ||||||||||  ||||||  | |||||||||||||||    
T  36755012 ctcgtgagcttaactcagttggta-ggacaatgcataatatatgtaaggttcgggattcaaactccgacca 36755081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 36760809 - 36760878
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    ||||||||||||||||||||||||  || |||| ||||||||||  ||||||  | |||||||||||||||    
T  36760809 ctcgtgagcttaactcagttggta-ggacaatgcataatatatgtaaggttcgggattcaaactccgacca 36760878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 5041336 - 5041385
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||| ||||||||| || |||| ||||||||||| ||||    
T  5041336 ctcgtgagcttaactgagttggtatggacaatgcataatatatgcaaggt 5041385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 8883550 - 8883599
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||| || |||| ||||||| ||| ||||    
T  8883550 ctcgtgagcttaactcagttggtatggacaatgcataatatgtgcaaggt 8883599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 17883885 - 17883958
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    ||||||| |||| |||| ||| ||| ||||||||||||||||||| ||||    ||||||||||||| ||||||    
T  17883885 ctcgtgaccttagctcacttgatatggataatgtataatatatgcaaggtcttgggttcaaactccggccacca 17883958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 450 - 495
Target Start/End: Original strand, 18023705 - 18023750
Alignment:
Q  450 aatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||||||||| |||| || |||||||||||||||||||||    
T  18023705 aatgcataatatatgcaaggtccagggttcaaactccgaccaccac 18023750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 483
Target Start/End: Complemental strand, 27068224 - 27068159
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||| |||||| |||||||||||| ||||||| ||| ||||||| | |||  ||||||||||    
T  27068224 gttctcgtaagcttagctcagttggtatggataatgcatattatatgcaaagtttgaggttcaaac 27068159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 483
Target Start/End: Original strand, 27210089 - 27210154
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||| |||||| |||||||||||| ||||||| ||| ||||||| | |||  ||||||||||    
T  27210089 gttctcgtaagcttagctcagttggtatggataatgcatattatatgcaaagtttgaggttcaaac 27210154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 423 - 472
Target Start/End: Original strand, 27263340 - 27263389
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttc 472  Q
    ||||| ||||||||||||||||| || |||| ||||||||||| ||||||    
T  27263340 cgtgaacttaactcagttggtatggacaatgcataatatatgcaaggttc 27263389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 423 - 472
Target Start/End: Original strand, 27270234 - 27270283
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttc 472  Q
    ||||| ||||||||||||||||| || |||| ||||||||||| ||||||    
T  27270234 cgtgaacttaactcagttggtatggacaatgcataatatatgcaaggttc 27270283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 423 - 492
Target Start/End: Original strand, 29053042 - 29053111
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||| |||||||||| | |||||||  |||||||| | |||| |  ||||||||||||||||||    
T  29053042 cgtgagcttagctcagttggtttggataatgcttaatatatccaaggtccggggttcaaactccgaccac 29053111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 495
Target Start/End: Original strand, 30467975 - 30468052
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||| |||||||||||||||||||| |  | |||| ||||||||| | | ||||||| ||||||||| ||| |||||    
T  30467975 gttcttgtgagcttaactcagttggtttgaacaatgcataatatatacaaagttcaagattcaaactctgacaaccac 30468052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 458
Target Start/End: Complemental strand, 38025183 - 38025146
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataa 458  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  38025183 ctcgtgagcttaactcagttggtatggataatgaataa 38025146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 425 - 470
Target Start/End: Original strand, 39043756 - 39043801
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||| || |||| ||||||||||| ||||    
T  39043756 tgagcttaactcagttggtatggacaatgcataatatatgctaggt 39043801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 450 - 495
Target Start/End: Complemental strand, 42227840 - 42227795
Alignment:
Q  450 aatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||||||||  |||||| ||||||||||||||||||||||    
T  42227840 aatgcataatatatgtaaggttcgaggttcaaactccgaccaccac 42227795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 486
Target Start/End: Complemental strand, 48103738 - 48103673
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactcc 486  Q
    |||||||||||||||||||||||   || |||| |||| |||||| ||||||  ||||||||||||    
T  48103738 ctcgtgagcttaactcagttggttgggacaatgcataaaatatgcaaggttcggggttcaaactcc 48103673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 4e-19; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 418 - 495
Target Start/End: Original strand, 3777712 - 3777789
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| | |||||| ||||||||||  ||||||||||    
T  3777712 gttctcgtgagcttaactcagttgatatggataatgtataatatatacaaggttcgaggttcaaacctcgaccaccac 3777789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 1091176 - 1091250
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||||| || |||| ||||| ||||| ||||||  ||||||||||| |||||||||    
T  1091176 ctcgtgagcttaactcagttggtatagacaatgcataatgtatgcaaggttcggggttcaaactctgaccaccac 1091250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 422 - 495
Target Start/End: Original strand, 24978242 - 24978315
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||| ||||||  ||||||||||| ||||| | ||||||||  |||||||||||    
T  24978242 tcgtgagcttaactcagttggtatagataatacataatatatgcaaggtttagggttcaaatcccgaccaccac 24978315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 421 - 464
Target Start/End: Original strand, 6094419 - 6094462
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  6094419 ctcgtgagcttaactcagttggtatggataatgtataatatatg 6094462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 424 - 495
Target Start/End: Complemental strand, 7454639 - 7454568
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||||||| ||||||| || |||||||||||||||| ||||||| | ||||||| |||||||||||    
T  7454639 gtgaacttaactcaattggtatcgacaatgtataatatatgcaaggttcatgattcaaaccccgaccaccac 7454568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 30678877 - 30678803
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||||  || |||| ||||||||||  ||||||| |||||||||| || |||||||    
T  30678877 ctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggttcatggttcaaacttcggccaccac 30678803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 495
Target Start/End: Complemental strand, 52262226 - 52262156
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||  | |||| |||| |||||| | |||| ||||||||||||||||||||||    
T  52262226 tgagcttaactcagttggtatgaacaatgcataaaatatgcaaagttcgaggttcaaactccgaccaccac 52262156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 16967257 - 16967184
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||| || ||||| ||| || |||| ||||||||||| |||||| |||||||||||||| |||||||    
T  16967257 tcgtgagcttagcttagttgatatggacaatgcataatatatgcaaggttcgaggttcaaactccggccaccac 16967184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 421 - 493
Target Start/End: Original strand, 37037344 - 37037417
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataat-atatgcgaggttcaaggttcaaactccgaccacc 493  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||| ||||||  ||||| ||| |||||||||    
T  37037344 ctcgtgagcttaactgagttggtatggataatgtataataatatgcaaggttcgtggttcgaaccccgaccacc 37037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 416 - 464
Target Start/End: Complemental strand, 50849142 - 50849094
Alignment:
Q  416 tcgttctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    ||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  50849142 tcgttctcgtgagcttaactcagttggtaatgacaatgcataatatatg 50849094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 17669645 - 17669716
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| ||||||||| ||  || |||||||||||||||| ||||||  ||||||||||||| |||||||    
T  17669645 gtgagcttgactcagttgatagggacaatgtataatatatgcaaggttcggggttcaaactccggccaccac 17669716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 41769879 - 41769808
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||| |||||||||| | ||||||| ||||||||| | |||| |  ||||||||||||||||||    
T  41769879 ctcgtgagcttagctcagttggtttggataatgcataatatatccaaggtccggggttcaaactccgaccac 41769808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 427 - 494
Target Start/End: Original strand, 44724925 - 44724992
Alignment:
Q  427 agcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||||||| | |||| ||||||||||  ||||||| |||||||||||||||||  |||||||||    
T  44724925 agcttaactcagatagtatagataatgtatgttatatgcaaggttcaaggttcaaaccacgaccacca 44724992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 27533240 - 27533314
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||  ||||||||||  || |||| ||||||||||| ||||||  ||||||||| |||||||||||    
T  27533240 ctcgtgagcttagatcagttggtagggacaatgcataatatatgcaaggttcggggttcaaaccccgaccaccac 27533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 416 - 470
Target Start/End: Original strand, 29800525 - 29800579
Alignment:
Q  416 tcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||||||||||||||||||||  ||||||| |||| |||||| ||||    
T  29800525 tcgttctcgtgagcttaactcagttggtaaggataatgcataaaatatgcaaggt 29800579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 31338016 - 31338090
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||| ||  |||||| ||||||||| | |||| |  | |||||||||||||||||||    
T  31338016 ctcgtgagcttaactcagttggcatgaataatgcataatatatacaaggtgcgggattcaaactccgaccaccac 31338090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 34632166 - 34632240
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| || |||||||||||||||| || | | |||||||||  ||| |||||||    
T  34632166 ctcgtgagcttagctcagttggtatagacaatgtataatatatgcaagatccgaggttcaaatcccggccaccac 34632240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 418 - 492
Target Start/End: Complemental strand, 39387858 - 39387784
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||||||||||| || ||||||||| ||||||| |||| |||||| |||||   ||||| ||||||||||||    
T  39387858 gttctcgtgagcttagctaagttggtatggataatgcataaaatatgcaaggtttggggttcgaactccgaccac 39387784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 48681997 - 48681923
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| ||||||||||||  | |||| ||||||||||| ||||||   | ||||||||||||||||||    
T  48681997 ctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggttcggagctcaaactccgaccaccac 48681923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 10356246 - 10356173
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||| || |||| |||||||||||  ||| |  ||||| ||||||| |||||||    
T  10356246 tcgtgagcttaactcagttggtatggacaatgcataatatatgcacggtccggggttcgaactccggccaccac 10356173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 28832238 - 28832161
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||| ||||||||||||||||||||||  | |||| ||||||||||| ||||   |||||||||  |||||||||||    
T  28832238 gttcttgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtctgaggttcaaatcccgaccaccac 28832161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 495
Target Start/End: Original strand, 32962557 - 32962634
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||| |||||| |||||||||||||||  | |||| |||| |||||| |||| || ||||||||| |||||||||||    
T  32962557 gttcttgtgagcataactcagttggtatgaacaatgcataaaatatgcaaggtccagggttcaaaccccgaccaccac 32962634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 472
Target Start/End: Complemental strand, 47719169 - 47719120
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttc 472  Q
    ||||||||||||||||||||||  ||||||| ||||||||||| ||||||    
T  47719169 cgtgagcttaactcagttggtaaggataatgcataatatatgcaaggttc 47719120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 424 - 492
Target Start/End: Original strand, 2994758 - 2994826
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||||| ||||||| |||| || |||||||||||||||| |||| |  ||||||||| ||||||||    
T  2994758 gtgagcttatctcagttcgtatggacaatgtataatatatgcaaggtccggggttcaaaccccgaccac 2994826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 8266250 - 8266178
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacc 493  Q
    ||||||| ||||||||||||||||| || |||| ||||| ||||| |||||  ||||||||| ||| ||||||    
T  8266250 ctcgtgatcttaactcagttggtatggacaatgcataatgtatgcaaggtttgaggttcaaaatccaaccacc 8266178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 418 - 493
Target Start/End: Complemental strand, 29451049 - 29450973
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataat-atatgcgaggttcaaggttcaaactccgaccacc 493  Q
    |||||||||||||||||||||||||||| || |||| ||||| |||||| ||||||  | ||||| | |||||||||    
T  29451049 gttctcgtgagcttaactcagttggtatggacaatgcataataatatgcaaggttcgggattcaacccccgaccacc 29450973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 424 - 492
Target Start/End: Original strand, 32560973 - 32561041
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||||| |||||||||||| || |||||||||||||||| |||| |  ||||||||  ||||||||    
T  32560973 gtgagcttatctcagttggtatggacaatgtataatatatgcaaggtccggggttcaaatcccgaccac 32561041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 34766858 - 34766906
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||||||||||||||| || ||||||||||| |||| ||||    
T  34766858 tcgtgagcttaactcagttggtatggacaatgtataatacatgcaaggt 34766906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Original strand, 4295231 - 4295302
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||| |||||||||| | ||||||| ||||||||| | ||||    ||||||||||||||||||    
T  4295231 ctcgtgagcttagctcagttggtttggataatgcataatatatccaaggtatggggttcaaactccgaccac 4295302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 484
Target Start/End: Original strand, 7803402 - 7803465
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaact 484  Q
    |||||||| ||||||||||| |||| || |||||||||||||||| ||||   |||||||||||    
T  7803402 ctcgtgagattaactcagtttgtatggacaatgtataatatatgcaaggtctgaggttcaaact 7803465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 493
Target Start/End: Original strand, 12212293 - 12212364
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacc 493  Q
    |||||||||||||||| ||||||  ||||||| ||||||||||| | || |  ||||||||| |||||||||    
T  12212293 tcgtgagcttaactcatttggtagggataatgcataatatatgcaacgtccggggttcaaaccccgaccacc 12212364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 16580861 - 16580814
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||| ||||||||||| || |||||||||||||||| ||||    
T  16580861 cgtgagcttaattcagttggtatggacaatgtataatatatgcaaggt 16580814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 495
Target Start/End: Complemental strand, 33153941 - 33153870
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||  || |||| ||||||||||  |||| | |||||||||| |||| ||||||    
T  33153941 gtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaaccccgaacaccac 33153870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 418 - 464
Target Start/End: Original strand, 14768800 - 14768846
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    |||||||||||||| ||||||||||||  || |||||||||||||||    
T  14768800 gttctcgtgagcttgactcagttggtagggacaatgtataatatatg 14768846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 17139581 - 17139507
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||  || |||| ||||||||| | |||| |  ||||||||| |||||||||||    
T  17139581 ctcgtgagcttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccaccac 17139507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Complemental strand, 27172786 - 27172724
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    ||||||||||||||||||||||||| || ||   ||||||||||| || | ||||||||||||    
T  27172786 ctcgtgagcttaactcagttggtatggacaaaacataatatatgcaagctccaaggttcaaac 27172724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 29506824 - 29506894
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    ||||||||||||||| ||||||||| || |||  ||||||||||| |||| || ||||| ||| |||||||    
T  29506824 ctcgtgagcttaacttagttggtatagacaatacataatatatgcaaggtccagggttcgaaccccgacca 29506894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 459
Target Start/End: Original strand, 37573317 - 37573355
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataat 459  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  37573317 ctcgtgagcttaactcagttggtataaataatgtataat 37573355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 40535261 - 40535227
Alignment:
Q  410 ataaaatcgttctcgtgagcttaactcagttggta 444  Q
    |||||||||| ||||||||||||||||||||||||    
T  40535261 ataaaatcgtactcgtgagcttaactcagttggta 40535227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 48646789 - 48646715
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataat-atatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||| |||| || |||| ||||| |||||| |||| |  ||||||||||||| |||||||    
T  48646789 tcgtgagcttaactcagtttgtatggacaatgcataataatatgcaaggtccggggttcaaactccggccaccac 48646715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 52043270 - 52043344
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| ||| |||||||||||| ||||||| |||| |||||| | ||||  ||||||||  |||||||||||    
T  52043270 ctcgtgagtttagctcagttggtatggataatgcataaaatatgcaatgttcggggttcaaatcccgaccaccac 52043344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 619469 - 619428
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||||||||||||||||||||  || ||||||||||||||||    
T  619469 gtgagcttaactcagttggtagagacaatgtataatatatgc 619428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 3431327 - 3431400
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||| |||||||||||||||   | |||| ||||||||||| | || | |||||||||| ||||||||||    
T  3431327 ctcgtgagtttaactcagttggtaggaagaatgcataatatatgcaatgtacgaggttcaaaccccgaccacca 3431400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 424 - 473
Target Start/End: Original strand, 8253739 - 8253788
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttca 473  Q
    ||||||||| |||||||||||| || |||| ||||||||||| |||||||    
T  8253739 gtgagcttagctcagttggtatggacaatgcataatatatgcaaggttca 8253788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 479
Target Start/End: Complemental strand, 15382886 - 15382825
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    ||||| |||||||||||||||||| |||  | |||||||||||||||| |||| | ||||||    
T  15382886 gttcttgtgagcttaactcagttgatatgaacaatgtataatatatgcaaggtccgaggttc 15382825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 450 - 495
Target Start/End: Complemental strand, 16967007 - 16966962
Alignment:
Q  450 aatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||||||||| |||||| |||||||||||||| |||||||    
T  16967007 aatgcataatatatgcaaggttcgaggttcaaactccggccaccac 16966962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 35473950 - 35474007
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    ||||||||||| |||| ||||||  ||||||| ||||||||||| ||||||| |||||    
T  35473950 tcgtgagcttagctcaattggtaaggataatgcataatatatgcaaggttcagggttc 35474007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 463
Target Start/End: Complemental strand, 37014246 - 37014201
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatat 463  Q
    ||||||||||| |||||||||||||||| | ||||| |||||||||    
T  37014246 gttctcgtgagattaactcagttggtatggttaatgcataatatat 37014201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 39252320 - 39252247
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||| |||||||| ||| || |||  ||||||||||  |||| || |||||||||||| ||||||||    
T  39252320 tcgtgagcttagctcagttgatatcgacaatacataatatatgtaaggtccagggttcaaactccaaccaccac 39252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 42045436 - 42045387
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| ||||    
T  42045436 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggt 42045387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 49875663 - 49875614
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||  || |||| ||||||||||| ||||    
T  49875663 ctcgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 49875614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 52441575 - 52441526
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| ||||    
T  52441575 ctcgtgagcttagctcagttggtatagacaatgcataatatatgcaaggt 52441526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 6e-18; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 427 - 494
Target Start/End: Original strand, 41520957 - 41521024
Alignment:
Q  427 agcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    ||||||||||||||||||  || |||| ||||||||||| ||||||||||||||||||||||||||||    
T  41520957 agcttaactcagttggtagagacaatgcataatatatgcaaggttcaaggttcaaactccgaccacca 41521024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 425 - 495
Target Start/End: Original strand, 48171882 - 48171952
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||  || |||||||||||||||| |||||| |||||||||| |||||||||||    
T  48171882 tgagcttaactcagttggtagagacaatgtataatatatgcaaggttctaggttcaaaccccgaccaccac 48171952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 17728079 - 17728153
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||| || |||||||||||| ||||||| ||||||||||| ||||||| |||||||| |||| |||||||    
T  17728079 ctcgtgagcatagctcagttggtatggataatgcataatatatgctaggttcatggttcaaattccggccaccac 17728153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 23809946 - 23810020
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| || || | ||||||||||| ||||||| ||||||||| ||| |||||||    
T  23809946 ctcgtgagcttagctcagttggtatggacaaagcataatatatgcaaggttcagggttcaaaccccggccaccac 23810020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 495
Target Start/End: Original strand, 31760247 - 31760317
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| |||||||||||| || |||||||||||||||| |||| ||  ||||||||||| ||||||||    
T  31760247 tgagcttagctcagttggtatagacaatgtataatatatgcaaggtccagagttcaaactccaaccaccac 31760317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 43034406 - 43034332
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||||| || |||| ||||||||||| ||||   |||||||||| ||| |||||||    
T  43034406 ctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 43034332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 54151689 - 54151645
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||||||||||||||||||||||  |||||||||||||||||||    
T  54151689 ctcgtgagcttaactcagttggtaaggataatgtataatatatgc 54151645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 421 - 464
Target Start/End: Original strand, 5185125 - 5185168
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  5185125 ctcgtgagtttaactcagttggtatagataatgtataatatatg 5185168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 19908692 - 19908763
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||  || |||| ||||||||||| |||| | |||||| ||| |||||||||||    
T  19908692 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccgaggttcgaaccccgaccaccac 19908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 424 - 483
Target Start/End: Original strand, 47704582 - 47704641
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    ||||||||||||||||||||||  |||||||||||||||||  |||||| ||||| ||||    
T  47704582 gtgagcttaactcagttggtatgaataatgtataatatatgtaaggttcgaggtttaaac 47704641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 9946424 - 9946498
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| || |||| |||| |||||| |||| |  ||||||||| |||||||||||    
T  9946424 ctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccaccac 9946498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 425 - 495
Target Start/End: Complemental strand, 11949823 - 11949753
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| |||||||||||| || |||| ||||||||||| |||| |  ||||||||| |||||||||||    
T  11949823 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 11949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 21318317 - 21318243
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| |||||||||||||||||||  || |||| ||||||||||| ||||  | ||||||||| |||||||||||    
T  21318317 ctcgcgagcttaactcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 21318243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 24665055 - 24664981
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| |||| |  ||||| ||| |||||||||||    
T  24665055 ctcgtgagcttagctcagttggtatggagaatgcataatatatgcaaggtccggggttcgaaccccgaccaccac 24664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 30380527 - 30380601
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| |||||||||||||||  || |||||||||||||||| |||||   ||||| || ||||||||||||    
T  30380527 ctcgtgagtttaactcagttggtaaggacaatgtataatatatgcaaggtttggggttcgaattccgaccaccac 30380601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 34969449 - 34969383
Alignment:
Q  429 cttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||| ||||| |||  | ||| |||||||||||| ||||||| |||||||||||||||||||||    
T  34969449 cttaacttagttgatatgaacaatatataatatatgcaaggttcagggttcaaactccgaccaccac 34969383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 42845022 - 42845096
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||| |  || |||| ||||||||||| |||| |  |||| ||||||||||||||||    
T  42845022 ctcgtgagcttaactcagttggaaaggacaatgcataatatatgcaaggtccggggttaaaactccgaccaccac 42845096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 22630424 - 22630351
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||| ||| ||||||||||| ||| |||| ||||||||||| ||||   |||||||||| ||||||||||    
T  22630424 ctcgtgagattatctcagttggtagtgacaatgcataatatatgcaaggtctgaggttcaaaccccgaccacca 22630351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 495
Target Start/End: Original strand, 25783145 - 25783222
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||| |||||||||||||||  ||||||  ||| ||||||| |||| | | ||||||| ||||||||||||    
T  25783145 gttctcgtgagtttaactcagttggtagggataatacatagtatatgcaaggtccgaagttcaaattccgaccaccac 25783222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 491
Target Start/End: Complemental strand, 40071031 - 40070962
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    ||||||||||||||||||||||||  | |||| ||||||||||| |||| | | |||||||| |||||||    
T  40071031 tcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccgaagttcaaaccccgacca 40070962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 427 - 495
Target Start/End: Complemental strand, 836293 - 836225
Alignment:
Q  427 agcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||| |||||||||||  || |||| | ||||||||| |||| | ||||||||||||||||||||||    
T  836293 agcttagctcagttggtagggacaatgcaaaatatatgcaaggtccgaggttcaaactccgaccaccac 836225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 415 - 463
Target Start/End: Complemental strand, 7490407 - 7490359
Alignment:
Q  415 atcgttctcgtgagcttaactcagttggtattgataatgtataatatat 463  Q
    ||||| ||||||||||||||||||||||||  || ||||||||||||||    
T  7490407 atcgtcctcgtgagcttaactcagttggtagagaaaatgtataatatat 7490359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 16733583 - 16733539
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||    
T  16733583 ctcgtgagcttaactcagttgataaagataatgtataatatatgc 16733539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 23686366 - 23686290
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    ||||||||||||||| ||||||| | ||  |||||||||||||||||| || |||  ||||||||| || |||||||    
T  23686366 gttctcgtgagcttagctcagttagcataaataatgtataatatatgcaagattcggggttcaaaccccaaccacca 23686290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 424 - 492
Target Start/End: Complemental strand, 30848043 - 30847975
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||||||||||| | || |||| |||| |||||| |||| | ||||||||||||| |||||    
T  30848043 gtgagcttaactcagttggtttggacaatgcataaaatatgcaaggtccgaggttcaaactccaaccac 30847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 485
Target Start/End: Original strand, 37193246 - 37193310
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactc 485  Q
    |||||||||||| ||||||| |||| || |||||||||||||||| |||| |  |||||||||||    
T  37193246 ctcgtgagcttagctcagttagtatggacaatgtataatatatgcaaggtccggggttcaaactc 37193310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 51286449 - 51286493
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||||    
T  51286449 ctcgtgagcttaactcagtgggtatagataatgtataaaatatgc 51286493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Original strand, 6610260 - 6610331
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||| ||||||||| || |||| ||||||||||||||||||| ||||    ||||||||| ||||||||    
T  6610260 ctcgtgaacttaactcacttagtatggataatgtataatatatgcaaggtctggggttcaaaccccgaccac 6610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 14202543 - 14202472
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||||||||||||||||| | | ||||||| ||||||||||  |||| |  ||||||||| ||||||||    
T  14202543 ctcgtgagcttaactcagttgatttggataatgcataatatatgtaaggtccggggttcaaaccccgaccac 14202472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 19588146 - 19588225
Alignment:
Q  416 tcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| |||||||||||| |||| ||||||| || |||| |||| |||||| |||| || ||||||||| ||| |||||||    
T  19588146 tcgtcctcgtgagcttagctcaattggtatggacaatgcataaaatatgcaaggtccagggttcaaaccccggccaccac 19588225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 491
Target Start/End: Original strand, 25115049 - 25115116
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    ||||| ||| |||||||||||| || |||| |||| |||||| ||||||| ||||||||| |||||||    
T  25115049 gtgagattatctcagttggtatggacaatgcataacatatgcaaggttcagggttcaaaccccgacca 25115116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 30135140 - 30135211
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||| ||  ||||||| ||||||||||  || | | |||||||||| |||||||||||    
T  30135140 gtgagcttaactcagttgataaggataatgcataatatatgtcagatccgaggttcaaaccccgaccaccac 30135211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 479
Target Start/End: Original strand, 43027292 - 43027347
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    ||||||||| |||| |||||| |||||||| ||||||||||| ||||||| |||||    
T  43027292 gtgagcttagctcaattggtagtgataatgcataatatatgcaaggttcatggttc 43027347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 2430994 - 2431068
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| ||| ||||||||||||||| |||  |||| |||||| ||||   |||||||||| |||||||||||    
T  2430994 ctcgtgagtttagctcagttggtattgacaatacataaaatatgcaaggtatgaggttcaaaccccgaccaccac 2431068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 424 - 470
Target Start/End: Original strand, 6087747 - 6087793
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||| |||||||||||| ||||||| ||||||||||| ||||    
T  6087747 gtgagcttagctcagttggtatagataatgcataatatatgcaaggt 6087793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 425 - 495
Target Start/End: Complemental strand, 8415555 - 8415485
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||| ||||||||||| || |||| ||||||||||  || | |||||||||||| | |||||||||    
T  8415555 tgagcttaattcagttggtatggacaatgcataatatatgtaagatccaaggttcaaaccctgaccaccac 8415485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 463
Target Start/End: Original strand, 23626378 - 23626420
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatat 463  Q
    |||||||| |||||||||||||||| || ||||||||||||||    
T  23626378 ctcgtgagtttaactcagttggtatagacaatgtataatatat 23626420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 418 - 464
Target Start/End: Complemental strand, 32923297 - 32923251
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    ||||||||||||||||||||||||||||  | |||| ||||||||||    
T  32923297 gttctcgtgagcttaactcagttggtatgaacaatgcataatatatg 32923251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Complemental strand, 39171434 - 39171372
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||| |||||||| ||| || |||| |||| |||||| ||||||| |||||||||    
T  39171434 ctcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggttcagggttcaaac 39171372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 42344682 - 42344608
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||| ||||||||| ||||||   | |||||||||||||||| |||| | ||||||||||  ||||||||||    
T  42344682 ctcgtgaccttaactcaattggtaggaacaatgtataatatatgcaaggtccgaggttcaaacatcgaccaccac 42344608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Complemental strand, 50362203 - 50362141
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||| |||||||||||  || |||| ||||||||||| |||| || |||||||||    
T  50362203 ctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccagggttcaaac 50362141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 471
Target Start/End: Original strand, 51002284 - 51002334
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggtt 471  Q
    ||||||||||||||||||||||||| || |||| |||| |||||| |||||    
T  51002284 ctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaaggtt 51002334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 422 - 480
Target Start/End: Complemental strand, 55421632 - 55421574
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttca 480  Q
    ||||||||||| |||||||||| | || |||| ||||||||||| ||||||| ||||||    
T  55421632 tcgtgagcttagctcagttggtttggacaatgcataatatatgcaaggttcagggttca 55421574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 2186397 - 2186348
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| ||||    
T  2186397 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggt 2186348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 6459990 - 6459945
Alignment:
Q  419 ttctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    ||||||||||||||||||||||| ||| || |||| ||||||||||    
T  6459990 ttctcgtgagcttaactcagttgatatggacaatgcataatatatg 6459945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 7030957 - 7030908
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||| || |||| |||| |||||| ||||    
T  7030957 ctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaaggt 7030908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 8027464 - 8027387
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||| ||| |||||||||||  ||||||| ||||||||||| || |    ||||||||| |||||||||||    
T  8027464 gttctcgtgagtttagctcagttggtaaggataatgcataatatatgcaagatcgggggttcaaaccccgaccaccac 8027387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 450 - 495
Target Start/End: Complemental strand, 11085800 - 11085755
Alignment:
Q  450 aatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  11085800 aatgcataatatatgcaaggttcgagattcaaactccgaccaccac 11085755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 19997419 - 19997354
Alignment:
Q  430 ttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||||||||  || |||| ||||||||||| | ||||  |||||||||||||||||||||    
T  19997419 ttaaatcagttggtagagacaatgcataatatatgcaaagttcggggttcaaactccgaccaccac 19997354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 20096334 - 20096285
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||| |||||||||||||||  ||||||| ||||||||||| ||||    
T  20096334 ctcgtgagtttaactcagttggtagggataatgcataatatatgcaaggt 20096285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 482
Target Start/End: Original strand, 23318364 - 23318425
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaa 482  Q
    ||||||||| ||| ||||||||||| || |||| |||| |||||| |||||||| |||||||    
T  23318364 ctcgtgagcataattcagttggtatagacaatgcataaaatatgcaaggttcaatgttcaaa 23318425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 32006497 - 32006570
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||| ||| |||||||||||  ||||||| ||||||||||  | ||||  ||||||||||||| ||||||    
T  32006497 ctcgtgagtttagctcagttggtagggataatgcataatatatgtaaagttcggggttcaaactccggccacca 32006570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 36035831 - 36035900
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacc 490  Q
    |||||||||||| ||||||| || | ||||||| ||||||||| | |||| |  ||||||||||||||||    
T  36035831 ctcgtgagcttagctcagttagtttggataatgcataatatatccaaggtccggggttcaaactccgacc 36035900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 491
Target Start/End: Original strand, 43155077 - 43155146
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    ||||||||||| |||||||| ||| ||||||| ||||||||||| || |   |||||||||| |||||||    
T  43155077 tcgtgagcttagctcagttgttatggataatgcataatatatgcaagatctgaggttcaaaccccgacca 43155146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 471
Target Start/End: Complemental strand, 44857249 - 44857200
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggtt 471  Q
    |||||||||||||||| ||||||| ||||||  ||||||||||| |||||    
T  44857249 tcgtgagcttaactcaattggtatagataatacataatatatgcaaggtt 44857200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 46745187 - 46745236
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||| |||||||| ||| || |||||||||||||||| ||||    
T  46745187 ctcgtgagcttatctcagttgatatggacaatgtataatatatgcaaggt 46745236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 47490770 - 47490709
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    ||||||| |||||||||||||||| |||||||  ||| |||||| ||||||  |||||||||    
T  47490770 tcgtgagtttaactcagttggtatggataatgcgtaaaatatgcaaggttccgggttcaaac 47490709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 52270094 - 52270045
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| ||||    
T  52270094 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggt 52270045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 495
Target Start/End: Original strand, 54500563 - 54500640
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||| |||||||||||  || |||| ||||||||||  |||| |  ||||||||| | |||||||||    
T  54500563 gttctcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtccggggttcaaacactgaccaccac 54500640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 29283812 - 29283886
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||| ||||||||||||||||||  || |||||||||||||||| ||||  | |||||||||||||||||||||    
T  29283812 ctcgtaagcttaactcagttggtagagacaatgtataatatatgcaaggtctagggttcaaactccgaccaccac 29283886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 32053785 - 32053858
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| ||||||  ||||||||||||| ||||||    
T  32053785 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggttcgtggttcaaactccggccacca 32053858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 13583546 - 13583620
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||| |||||||  ||||||||||||||||||| || |   |||||||||| |||||||||||    
T  13583546 ctcgtgagcttaactcggttggtaaggataatgtataatatatgcaagctcagaggttcaaaccccgaccaccac 13583620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 8629759 - 8629686
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||| ||||||| || |||| ||||||||||| ||||||  |||||||||  ||||||||||    
T  8629759 tcgtgagcttaactcaattggtatggacaatgcataatatatgcaaggttcggggttcaaacctcgaccaccac 8629686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 20381176 - 20381124
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||| ||||    
T  20381176 gttctcgtgagcttcgctcagttggtatggataatgtataatatatgcaaggt 20381124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 788863 - 788937
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||  || |||| ||||||||||| ||||||   |||||||| |||||||||||    
T  788863 ctcgtgagcttatctcagttggtaaggacaatgcataatatatgcaaggttcggagttcaaaccccgaccaccac 788937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 9444954 - 9445028
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| ||||||||||||  | ||||||||| |||||| ||||||| ||||| ||  |||||||||||    
T  9444954 ctcgtgagcttagctcagttggtatgaacaatgtataaaatatgcaaggttcagggttcgaatcccgaccaccac 9445028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 479
Target Start/End: Complemental strand, 1918525 - 1918464
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    ||||||||||| |||||||||||||||| || |||| ||||||||||| |||| | ||||||    
T  1918525 gttctcgtgagtttaactcagttggtatagacaatgcataatatatgcaaggtccgaggttc 1918464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 419 - 495
Target Start/End: Original strand, 10018395 - 10018470
Alignment:
Q  419 ttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||| ||| |||||||||||  ||||||| ||||||||||  ||||||  ||||||||||||| |||||||    
T  10018395 ttctcgtgagtttagctcagttggtag-gataatgcataatatatgtaaggttcggggttcaaactccggccaccac 10018470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 17382081 - 17382125
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||||||||||| |||||||||||| || ||||||||||||||||    
T  17382081 ctcgtgagcttagctcagttggtatggacaatgtataatatatgc 17382125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 424 - 472
Target Start/End: Complemental strand, 28757085 - 28757037
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttc 472  Q
    |||||||||||||||||||||  || |||||||||||||||| ||||||    
T  28757085 gtgagcttaactcagttggtaaggacaatgtataatatatgcaaggttc 28757037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 473
Target Start/End: Original strand, 28951396 - 28951448
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttca 473  Q
    |||||||||||||||||||||||||  | |||| ||||||||||| |||||||    
T  28951396 ctcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggttca 28951448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 473
Target Start/End: Complemental strand, 31140876 - 31140824
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttca 473  Q
    |||||||||||||||||| || ||  ||||||||||||||||||| |||||||    
T  31140876 ctcgtgagcttaactcagctgataaagataatgtataatatatgcaaggttca 31140824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 418 - 465
Target Start/End: Original strand, 2108719 - 2108766
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||||||||||||||||||||||||||| || |||| |||| ||||||    
T  2108719 gttctcgtgagcttaactcagttggtatggacaatgcataaaatatgc 2108766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 9311994 - 9311923
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||||||||||||||||  |||||  ||||||||||  || ||  |||||||||| ||||||||    
T  9311994 ctcgtgagcttaactcagttggtatgaataatacataatatatgtaagatttgaggttcaaaccccgaccac 9311923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Original strand, 20744135 - 20744206
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| ||||    ||||||||| ||||||||    
T  20744135 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccccgaccac 20744206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Original strand, 27829595 - 27829666
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||| |||||||||| | ||||||||| ||||||| | || | |  ||||||||||||||||||    
T  27829595 ctcgtgagcttacctcagttggtttggataatgtagaatatatccaagatccggggttcaaactccgaccac 27829666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 494
Target Start/End: Complemental strand, 32524486 - 32524411
Alignment:
Q  419 ttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    ||||||||||||||||||| ||||||  || |||| ||||||||||| | || || ||||||||| || |||||||    
T  32524486 ttctcgtgagcttaactcaattggtagggacaatgcataatatatgcaaagtccagggttcaaaccccaaccacca 32524411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 471
Target Start/End: Complemental strand, 331950 - 331900
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggtt 471  Q
    ||||||||||||||||||||||||  || |||| ||||||||||| |||||    
T  331950 ctcgtgagcttaactcagttggtagagacaatgcataatatatgcaaggtt 331900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Complemental strand, 1989106 - 1989045
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||  |||||  ||||||||||    
T  1989106 ctcgtgagcttaactcagttggta-tgacaatgcataatatatgtaaggtttgaggttcaaac 1989045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 424 - 470
Target Start/End: Original strand, 5925320 - 5925366
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||||| ||||||  ||||||||||||||||||| ||||    
T  5925320 gtgagcttaactcaattggtaaagataatgtataatatatgctaggt 5925366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 425 - 495
Target Start/End: Original strand, 9977058 - 9977128
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||| ||||||| ||||||| ||||||||||| ||||    ||||||||| | |||||||||    
T  9977058 tgagcttaactcaattggtatggataatgcataatatatgcaaggtctggggttcaaaccctgaccaccac 9977128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Original strand, 24349541 - 24349603
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||||||| ||||||||  | |||||||||||| ||| ||||||  |||||||||    
T  24349541 ctcgtgagcttaactcggttggtatgcacaatgtataatatttgcaaggttcggggttcaaac 24349603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 415 - 465
Target Start/End: Complemental strand, 28363545 - 28363495
Alignment:
Q  415 atcgttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||| ||| ||||||||||||||||| ||| |||||||||||| ||||||    
T  28363545 atcgtcctcatgagcttaactcagttgatatagataatgtataaaatatgc 28363495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Original strand, 31971526 - 31971588
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    ||||| ||||||||||||||||||  || |||| ||||||||||| |||| | ||||||||||    
T  31971526 ctcgtaagcttaactcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaac 31971588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 361754 - 361795
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||||||||||||||||||||| || |||| |||||||||||    
T  361754 gtgagcttaactcagttggtatggacaatgcataatatatgc 361795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 4494935 - 4494886
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||| |||||||||||| || |||| |||| |||||||||||    
T  4494935 ctcgtgagcttagctcagttggtatggacaatgcataaaatatgcgaggt 4494886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 13654221 - 13654294
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    ||||||||||||||||||||||||  || || | ||||||||||| || ||| | |||||||||| | ||||||    
T  13654221 ctcgtgagcttaactcagttggtaaggacaacgcataatatatgcaagtttcgacgttcaaactctggccacca 13654294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 419 - 472
Target Start/End: Complemental strand, 33938745 - 33938692
Alignment:
Q  419 ttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttc 472  Q
    |||||||||||||| ||||||||||||  | |||| ||||||||||| ||||||    
T  33938745 ttctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggttc 33938692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 5107309 - 5107236
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||||||||||||||||||||  |||||| ||||||||||| |||| | |||||| ||| ||||||||||    
T  5107309 ctcgtgagcttaactcagttggtatgaataatgcataatatatgcaaggtccgaggttcgaaccccgaccacca 5107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 414 - 494
Target Start/End: Original strand, 27903103 - 27903183
Alignment:
Q  414 aatcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    ||||||||||||||| |||  |||||||||||  | |||| ||||||||||| ||||||  ||||||||||||||||||||    
T  27903103 aatcgttctcgtgagtttagttcagttggtatgaacaatgcataatatatgcaaggttcggggttcaaactccgaccacca 27903183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 421 - 492
Target Start/End: Original strand, 2839795 - 2839866
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||| |||||||||| | ||||||| ||||||||| | ||||||  ||||||||||||||||||    
T  2839795 ctcgtgagcttagctcagttggtttggataatgcataatatatccaaggttcggggttcaaactccgaccac 2839866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 412 - 495
Target Start/End: Original strand, 15889399 - 15889482
Alignment:
Q  412 aaaatcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| |||||||||||| |||||||||||  || |||| ||||||||||| ||||  | ||||||||| |||||||||||    
T  15889399 aaaatcgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 15889482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 11637636 - 11637563
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    ||||||||||||||||||||||||| || |||| |||| |||||| ||||||  ||||| ||| ||||||||||    
T  11637636 ctcgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcgaaccccgaccacca 11637563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 418 - 483
Target Start/End: Complemental strand, 22538889 - 22538824
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    ||||||||||||||||||||||||||  | |||||| |||| |||||| |||| ||||||||||||    
T  22538889 gttctcgtgagcttaactcagttggttgtaataatgcataaaatatgcaaggtccaaggttcaaac 22538824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 31545869 - 31545926
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    ||||||||||||||||||||||   ||||||| ||||||||||| |||||||||||||    
T  31545869 tcgtgagcttaactcagttggttaggataatgcataatatatgcaaggttcaaggttc 31545926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 33645753 - 33645704
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  33645753 ctcgtgagcttaactcagttggtatggacaatgtataatatatgcaaggt 33645704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 41651002 - 41650930
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||| || |||| ||||||||||| |||| | | |||||||| |||||||||||    
T  41651002 tcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccga-gttcaaacaccgaccaccac 41650930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 495
Target Start/End: Complemental strand, 12159459 - 12159391
Alignment:
Q  427 agcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||  || |||||||||||||||  ||||||| | ||||||| |||||||||||    
T  12159459 agcttaactcagttggtagagacaatgtataatatatgtaaggttcaggattcaaaccccgaccaccac 12159391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 495
Target Start/End: Original strand, 13864339 - 13864415
Alignment:
Q  419 ttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||||||  | |||  ||||||||||| |||| |  ||||||||| |||||||||||    
T  13864339 ttctcgtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 419 - 465
Target Start/End: Original strand, 17046329 - 17046375
Alignment:
Q  419 ttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||||||||||||||||||||||||| || |||| |||||||||||    
T  17046329 ttctcgtgagcttaactcagttggtatggacaatgcataatatatgc 17046375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 20175722 - 20175796
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| || |||||||||||||| | || ||||  |||| ||||||| |||||||    
T  20175722 ctcgtgagcttagctcagttggtatggacaatgtataatatatacaagattcagagttcgaactccggccaccac 20175796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 437 - 495
Target Start/End: Complemental strand, 26913161 - 26913103
Alignment:
Q  437 agttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||| || |||| ||||||||||| | ||||||||||||||||||| |||||||    
T  26913161 agttggtatagacaatgcataatatatgcaacgttcaaggttcaaactccggccaccac 26913103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 29695012 - 29695086
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||| ||||||||||||| ||| || |||| ||||||||||  ||||||  ||||||||| |||||||||||    
T  29695012 ctcgtgaccttaactcagttgatatggacaatgcataatatatgtaaggttcgtggttcaaaccccgaccaccac 29695086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 39980505 - 39980579
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| ||||||| |||| |||||| |||| |   |||||||| |||||||||||    
T  39980505 ctcgtgagcttagctcagttggtatggataatgcataaaatatgcaaggtccggagttcaaaccccgaccaccac 39980579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 8545056 - 8544979
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||| ||  || |||| ||||||||||| |||| |   |||| |||||||||||||||    
T  8545056 gttctcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtccggagttcgaactccgaccaccac 8544979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 495
Target Start/End: Original strand, 29561545 - 29561618
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||| |||| |||  ||||||| |||||||||||| ||  ||||||||||  |||||||||||    
T  29561545 tcgtgagcttaactcggttgatatgaataatgtgtaatatatgcgaagtctaaggttcaaatcccgaccaccac 29561618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 37614490 - 37614417
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||| |||||||||||  || || | ||||||||||| |||||| ||||||||||| || |||||||    
T  37614490 tcgtgagcttagctcagttggtagagacaacgcataatatatgcaaggttcgaggttcaaacttcggccaccac 37614417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 489
Target Start/End: Original strand, 38495142 - 38495207
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgac 489  Q
    |||| ||||||||||||||||| ||||||| |||| |||||| ||||||  ||||||||| |||||    
T  38495142 gtgaacttaactcagttggtatggataatgcataaaatatgcaaggttcggggttcaaaccccgac 38495207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 482
Target Start/End: Original strand, 43358257 - 43358318
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaa 482  Q
    |||||||||||| |||||||||||| |||||||||||| |||||| || | | |||||||||    
T  43358257 ctcgtgagcttagctcagttggtatagataatgtataaaatatgcaagatccgaggttcaaa 43358318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 483
Target Start/End: Complemental strand, 866089 - 866029
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    ||||||| ||||||||||||||| |||||||||||| |||||| |||| |  |||||||||    
T  866089 cgtgagcataactcagttggtatggataatgtataaaatatgcaaggtccggggttcaaac 866029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 479
Target Start/End: Original strand, 3671217 - 3671273
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    ||||||||||||||||||| ||  ||||||||||||||||||| |||| || |||||    
T  3671217 cgtgagcttaactcagttgataaggataatgtataatatatgcaaggtccagggttc 3671273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 495
Target Start/End: Original strand, 20258544 - 20258616
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||| |||||||||||||||| ||||||| ||||||||||| |||| || | ||| ||| || ||||||||    
T  20258544 cgtgaggttaactcagttggtatggataatgcataatatatgcaaggtgcaggattcgaaccccaaccaccac 20258616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 495
Target Start/End: Complemental strand, 1538869 - 1538798
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||| |||||||  | || | ||||||||||| |||| | |||||||||| |||||||||||    
T  1538869 gtgagcttaactcaattggtataaacaacgcataatatatgcaaggtccgaggttcaaacgccgaccaccac 1538798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 491
Target Start/End: Original strand, 16076431 - 16076498
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    ||||||||||||||| || ||| || |||| ||||||||||| ||||||| ||||||| | |||||||    
T  16076431 gtgagcttaactcagctgatatggacaatgcataatatatgcaaggttcagggttcaatccccgacca 16076498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 16133147 - 16133080
Alignment:
Q  404 taaaacataaaa-tcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||| ||| ||||||||||||||||| |||||||||||  || |||| ||||||||||| ||||    
T  16133147 taaaacatgaaagtcgttctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 16133080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 482
Target Start/End: Original strand, 27679497 - 27679556
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaa 482  Q
    |||||||||| |||||||||||  ||||||| ||||||||||| ||||||  ||||||||    
T  27679497 cgtgagcttagctcagttggtaaagataatgcataatatatgcaaggttcggggttcaaa 27679556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 418 - 465
Target Start/End: Original strand, 31877922 - 31877969
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||||    
T  31877922 gttctcgtgagcttaactcacttggtatggacaatgcataatatatgc 31877969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 40837967 - 40837896
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||| ||||||||||||||||| || ||| ||||| |||||| |||| |  ||||||||| ||||||||    
T  40837967 ctcgtgaacttaactcagttggtatggacaatatataaaatatgcaaggtccggggttcaaaccccgaccac 40837896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 423 - 465
Target Start/End: Complemental strand, 8902838 - 8902796
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||||||||| |||||||||||| || ||||||||||||||||    
T  8902838 cgtgagcttagctcagttggtatggacaatgtataatatatgc 8902796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 418 - 464
Target Start/End: Complemental strand, 11694625 - 11694579
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    ||||||||||||| | |||||||||||| || |||||||||||||||    
T  11694625 gttctcgtgagctcagctcagttggtatggacaatgtataatatatg 11694579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 13796323 - 13796401
Alignment:
Q  417 cgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||| | |||  | |||| ||||||||||| ||||    ||| |||||||||||||||||    
T  13796323 cgttctcgtgagcttaactcagtcgatatgaacaatgcataatatatgcaaggtctggggtacaaactccgaccaccac 13796401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 16701645 - 16701571
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||  || |||| ||||||||||| |||| |  | ||||||| |||||||||||    
T  16701645 ctcgtgagcttagctcagttggtagggacaatgaataatatatgcaaggtccgggattcaaaccccgaccaccac 16701571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 425 - 471
Target Start/End: Complemental strand, 19068499 - 19068453
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggtt 471  Q
    |||||||| |||||||||||| ||||||| ||||||||||| |||||    
T  19068499 tgagcttagctcagttggtatggataatgcataatatatgcaaggtt 19068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 22522865 - 22522791
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| ||| |||||||| || |||| ||||||||||| |||| |  ||||||||| ||| |||||||    
T  22522865 ctcgtgagcttagctcggttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 22522791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 418 - 464
Target Start/End: Complemental strand, 26034675 - 26034629
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    ||||||||||||||||||||||||||||  | |||| ||||||||||    
T  26034675 gttctcgtgagcttaactcagttggtatgaacaatgcataatatatg 26034629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 418 - 492
Target Start/End: Original strand, 32622889 - 32622962
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||||||  ||| |||||||||||| || ||||||||| |||||| |||||| |||||| ||| ||||||||    
T  32622889 gttctcgtgaatttagctcagttggtatggacaatgtataaaatatgcaaggttc-aggttcgaaccccgaccac 32622962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 418 - 464
Target Start/End: Complemental strand, 40027831 - 40027785
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    ||||||||||||||||||||||||| || || |||| ||||||||||    
T  40027831 gttctcgtgagcttaactcagttggcatggacaatgcataatatatg 40027785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 425 - 479
Target Start/End: Original strand, 43108570 - 43108624
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    ||||||||||||||||||||  || |||| ||||||||||| ||||||| |||||    
T  43108570 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggttcagggttc 43108624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 1745979 - 1746020
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||||||||||||||||| ||  |||||||||||||||||||    
T  1745979 gtgagcttaactcagttgttaaagataatgtataatatatgc 1746020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 450 - 495
Target Start/End: Original strand, 3052305 - 3052350
Alignment:
Q  450 aatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||| |||||| ||||||||||  ||||||||||    
T  3052305 aatgtataatatatgcaaggttcgaggttcaaacctcgaccaccac 3052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 471
Target Start/End: Complemental strand, 10032337 - 10032288
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggtt 471  Q
    |||||||||||||||||||||||| || |||| |||| |||||| |||||    
T  10032337 tcgtgagcttaactcagttggtatggacaatgcataacatatgcaaggtt 10032288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 18589931 - 18589882
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||||||||||||||||  | |||| ||||||||||| ||||    
T  18589931 ctcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggt 18589882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 463
Target Start/End: Original strand, 29178441 - 29178486
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatat 463  Q
    |||||||||||||||||||||||||||| || |||| |||| ||||    
T  29178441 gttctcgtgagcttaactcagttggtatggacaatgcataaaatat 29178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 494
Target Start/End: Original strand, 29904418 - 29904491
Alignment:
Q  422 tcgtgagcttaactcagttggt-attgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||||||||||||||||| |  || |||  ||||||||||  |||||| |||||||||||||||| ||||    
T  29904418 tcgtgagcttaactcagttggttaaggacaatacataatatatgtaaggttcgaggttcaaactccgactacca 29904491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 37021423 - 37021362
Alignment:
Q  434 ctcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||| | ||||||| ||||||||||| || |||| ||||||||| |||||||||||    
T  37021423 ctcaattggtttggataatgcataatatatgcaagattcagggttcaaaccccgaccaccac 37021362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 37932327 - 37932376
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| ||||    
T  37932327 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggt 37932376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 20990971 - 20990894
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||| ||||| ||| || |||| |||| |||||| ||||||| ||||||||| |||||||||||    
T  20990971 gttctcgtgagcttaacttagttgttatagacaatgcataaaatatgcaaggttcagggttcaaaccccgaccaccac 20990894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 424 - 492
Target Start/End: Complemental strand, 13100325 - 13100257
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||||||||||| | ||||||| ||||||||| | |||| | |||||||||||||||||||    
T  13100325 gtgagcttaactcagttggtttggataatgcataatatatccaaggtccgaggttcaaactccgaccac 13100257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 419 - 495
Target Start/End: Complemental strand, 31815953 - 31815877
Alignment:
Q  419 ttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||||||  || |||| ||||||||||| |||| |  ||||||||| |||||||||||    
T  31815953 ttctcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 418 - 492
Target Start/End: Original strand, 29599933 - 29600007
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    ||||||||||||||| |||||||||| | ||||||| ||||||||| | |||| |  ||||||||||||||||||    
T  29599933 gttctcgtgagcttagctcagttggtttggataatgcataatatatccaaggtccggggttcaaactccgaccac 29600007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 36615097 - 36615024
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    ||||||||||||||||||||||||| || |||| ||| ||||||| ||||  |||||| |||| ||||||||||    
T  36615097 ctcgtgagcttaactcagttggtatggacaatggatagtatatgcaaggtctaaggtttaaaccccgaccacca 36615024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 495
Target Start/End: Complemental strand, 25395500 - 25395432
Alignment:
Q  427 agcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||   | |||| ||||||||||| ||||||||||||||||  |||||||||||    
T  25395500 agcttaactcagttggtaggaacaatgcataatatatgcaaggttcaaggttcaaatcccgaccaccac 25395432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 495
Target Start/End: Original strand, 27848153 - 27848229
Alignment:
Q  420 tctcgtgagcttaactcagttggtattga-taatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||| |||| |  ||||||||| ||| |||||||    
T  27848153 tctcgtgagcttaactcagttggtattgacaaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 27848229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 421 - 491
Target Start/End: Complemental strand, 14414959 - 14414886
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatg---tataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    ||||||||||||||||||||||||| || ||||    ||||||||||  |||||| ||||||||||||||||||    
T  14414959 ctcgtgagcttaactcagttggtatggacaatgcataataatatatgtaaggttcgaggttcaaactccgacca 14414886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 418 - 465
Target Start/End: Original strand, 17142824 - 17142871
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  17142824 gttctcgtgagcttagctcagttggtagtgacaatgtataatatatgc 17142871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 424 - 495
Target Start/End: Complemental strand, 23250381 - 23250310
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||   | |||| ||||||||||| |||| || ||||||||| |||||||||||    
T  23250381 gtgagcttaactcagttggtaagaacaatgcataatatatgcaaggtccagggttcaaaccccgaccaccac 23250310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 424 - 495
Target Start/End: Complemental strand, 36264540 - 36264469
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||| ||| ||||||| ||||||| ||||||||||| | ||||  ||||||||| |||||||||||    
T  36264540 gtgagcttaattcaattggtatggataatgcataatatatgcaaagttcggggttcaaaccccgaccaccac 36264469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 425 - 495
Target Start/End: Complemental strand, 5168639 - 5168569
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||| ||  ||||||| ||||||||||| ||||||  ||||||||| ||||| |||||    
T  5168639 tgagcttaactcagttgatagggataatgcataatatatgcaaggttcggggttcaaaccccgactaccac 5168569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 10723936 - 10724010
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||| | | ||||| ||||||||||| ||||   |||||||||| ||| |||||||    
T  10723936 ctcgtgagcttaactcagttggtttgggtaatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 10724010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 22523076 - 22523002
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| || |||  ||||||||||| |||||| |||||||||  ||| |||||||    
T  22523076 ctcgtgagcttagctcagttggtatggacaatacataatatatgcaaggttcgaggttcaaatcccggccaccac 22523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 31543009 - 31543083
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| ||||| |||||| ||||||| ||||||||||| |||| |  ||||||||| || ||||||||    
T  31543009 ctcgtgagcttagctcagatggtatggataatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 31543083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 31838000 - 31837926
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||  ||||||  | |||||||  ||||||||||    
T  31838000 ctcgtgaacttaactcaattggtatggataatgtataatatatgtaaggttcgggattcaaacctcgaccaccac 31837926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 41939172 - 41939098
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| || ||||||||  ||||||| ||||||||||  |||||  || |||||||||||||||||||    
T  41939172 ctcgtgagcttagcttagttggtagggataatgcataatatatgtaaggtttgagattcaaactccgaccaccac 41939098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 2256968 - 2257017
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||| || |||| ||||||||||| ||||    
T  2256968 ctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggt 2257017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 489
Target Start/End: Original strand, 34376886 - 34376951
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgac 489  Q
    |||||| ||||||||||||||  |||| || |||| |||||| |||||| ||||||||||||||||    
T  34376886 gtgagcctaactcagttggtaaggatattgcataaaatatgcaaggttcgaggttcaaactccgac 34376951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 34977201 - 34977250
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||| || |||| ||||||||||| ||||    
T  34977201 ctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggt 34977250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 434 - 491
Target Start/End: Complemental strand, 35281262 - 35281205
Alignment:
Q  434 ctcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    ||||||||  || ||||||||||||||||||| |||||| |||||||||| |||||||    
T  35281262 ctcagttgaaatggataatgtataatatatgcaaggttcgaggttcaaaccccgacca 35281205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 5676736 - 5676780
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||    
T  5676736 ctcgtgagcttaactcagttggtaatgacaatgcataatatatgc 5676780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 413 - 465
Target Start/End: Original strand, 6471255 - 6471307
Alignment:
Q  413 aaatcgttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||| |||||||| ||||||||||||||||||| || |||||||||| |||||    
T  6471255 aaattgttctcgtaagcttaactcagttggtatggacaatgtataatgtatgc 6471307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 427 - 495
Target Start/End: Complemental strand, 9547467 - 9547399
Alignment:
Q  427 agcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||| ||| || |||| ||||||||||| |||||   ||||||||| |||||||||||    
T  9547467 agcttaactcagttgatatggacaatgcataatatatgcaaggtttggggttcaaaccccgaccaccac 9547399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 419 - 495
Target Start/End: Complemental strand, 20565141 - 20565065
Alignment:
Q  419 ttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||| |||||||||||  || |||| ||||||||||| |||| |  ||||||||| || ||||||||    
T  20565141 ttctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 20565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 479
Target Start/End: Complemental strand, 37320579 - 37320523
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    ||||||||||||||||||||||  || |||| ||||||||||| |||||| ||||||    
T  37320579 cgtgagcttaactcagttggtaaagacaatgcataatatatgcaaggttcgaggttc 37320523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 346188 - 346117
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||| |||||||||| |  |||||| ||||||||||  |||| || ||||||||| ||||||||    
T  346188 ctcgtgagcttagctcagttggtttgaataatgcataatatatgtaaggtccagggttcaaaccccgaccac 346117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 4238759 - 4238830
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||| ||||||| |||| || |||| ||||||||||  ||||||  ||||| |||||||||||||||    
T  4238759 gtgagcttagctcagttagtatggacaatgcataatatatgtaaggttcggggttcgaactccgaccaccac 4238830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 483
Target Start/End: Original strand, 4897543 - 4897602
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||||||||||||  || |||| ||||||||||| ||||| | |||||||||    
T  4897543 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtttatggttcaaac 4897602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 483
Target Start/End: Original strand, 4944937 - 4944996
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||||||||||||  || |||| ||||||||||| ||||| | |||||||||    
T  4944937 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtttatggttcaaac 4944996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 28874616 - 28874545
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||| ||||||||||||||||   |||||||||||| |||||| ||||||  ||||||||  ||||||||    
T  28874616 ctcgtgggcttaactcagttggttgggataatgtataaaatatgcaaggttcggggttcaaatcccgaccac 28874545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 31166174 - 31166111
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaa 481  Q
    |||||||||| ||||| ||||||| ||  ||||||||||||||||||  |||| ||||||||||    
T  31166174 gttctcgtgaacttaattcagttgatagagataatgtataatatatgtaaggtccaaggttcaa 31166111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 41165423 - 41165474
Alignment:
Q  412 aaaatcgttctcgtgagcttaactcagttggtattgataatgtataatatat 463  Q
    ||||| ||| |||||||||||||||||||| ||| ||||||| |||||||||    
T  41165423 aaaattgttatcgtgagcttaactcagttgttatggataatgcataatatat 41165474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 479
Target Start/End: Complemental strand, 6723141 - 6723083
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    |||||||| |||||||||||| ||| || |||||||||||||||| |||| || |||||    
T  6723141 ctcgtgagtttaactcagttgatatggacaatgtataatatatgcaaggtccagggttc 6723083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 471
Target Start/End: Complemental strand, 9383273 - 9383223
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggtt 471  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| |||||    
T  9383273 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtt 9383223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 14735957 - 14735883
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| || | ||||||| || |||| |||| |||||  |||||| |||||||||||||| |||||||    
T  14735957 ctcgtgagcttagcttaattggtatggacaatgcataaaatatgtaaggttcgaggttcaaactccggccaccac 14735883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 21482583 - 21482509
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| ||| |||||||||||  ||||||||||||||||||| |||| |  ||||  ||| |||||||||||    
T  21482583 ctcgtgagtttagctcagttggtaaggataatgtataatatatgcaaggtccggggtttgaaccccgaccaccac 21482509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 424 - 470
Target Start/End: Original strand, 27152353 - 27152399
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||||||||||||  ||||||| ||||||||||| ||||    
T  27152353 gtgagcttaactcagttggtagggataatgcataatatatgcaaggt 27152399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 28439633 - 28439559
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| |||||||| || |||| ||||||| |||| |||||| ||||   | ||||||||||||||||||||    
T  28439633 ctcgtgagtttaactcaatttgtatggataatgcataaaatatgcaaggtctgatgttcaaactccgaccaccac 28439559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 463
Target Start/End: Original strand, 40257181 - 40257223
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatat 463  Q
    ||||||||||||||||| ||||||| || ||||||||||||||    
T  40257181 ctcgtgagcttaactcaattggtatggacaatgtataatatat 40257223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 43067663 - 43067737
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||||   |||||| |||| |||||| | ||||  ||||||||| | |||||||||    
T  43067663 ctcgtgagcttaactcagttggtaggaataatgaataacatatgcaatgttcggggttcaaaccctgaccaccac 43067737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 437 - 494
Target Start/End: Complemental strand, 660870 - 660813
Alignment:
Q  437 agttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    ||||||||| || |||| ||||||||||| |||| || ||||||||| ||||||||||    
T  660870 agttggtatggacaatgcataatatatgcaaggtccagggttcaaaccccgaccacca 660813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 463
Target Start/End: Complemental strand, 2661115 - 2661070
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatat 463  Q
    |||||||||||||||||||||||||||  || |||| |||||||||    
T  2661115 gttctcgtgagcttaactcagttggtaaggacaatgcataatatat 2661070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 24579731 - 24579658
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||| || ||||||| | || |||| ||||||||||| |||| || ||||||||||| | |||||||    
T  24579731 tcgtgagcttagcttagttggtttggacaatgcataatatatgcaaggtccagggttcaaactctggccaccac 24579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 450 - 495
Target Start/End: Complemental strand, 24581052 - 24581007
Alignment:
Q  450 aatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||||||||| |||||| |||||||||| |||||||||||    
T  24581052 aatgcataatatatgcaaggttcgaggttcaaaccccgaccaccac 24581007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 36547296 - 36547255
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||||||| |||||||||||  |||||||||||||||||||    
T  36547296 gtgagcttagctcagttggtaaggataatgtataatatatgc 36547255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 40967434 - 40967373
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||||||||||| ||  || |||| ||||||||||| |||||  ||||||||||    
T  40967434 tcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaac 40967373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 161141 - 161212
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||| || |||| |||| |||||| ||||||  ||||||||| |||||||||||    
T  161141 gtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcaaaccccgaccaccac 161212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 487
Target Start/End: Original strand, 7553676 - 7553742
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccg 487  Q
    |||||||| |||||||||||||||  || |||| ||||||||||| |||| ||||||||||||||||    
T  7553676 ctcgtgagtttaactcagttggtagggacaatgcataatatatgcaaggtccaaggttcaaactccg 7553742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 471
Target Start/End: Complemental strand, 8984554 - 8984508
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggtt 471  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  8984554 tgagcttaactcagttggtatggataatgtataatatatgcaaggtt 8984508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 483
Target Start/End: Complemental strand, 13357505 - 13357443
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    ||||||||||||||||||||||||| || |||| ||||||||||| |||| | ||||||||||    
T  13357505 ctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtacgaggttcaaac 13357443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 24023775 - 24023698
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||  ||||||||||| ||||||||||||| | ||| |||| |  ||||||||| |||||||||||    
T  24023775 gttctcgtgagcttaggtcagttggtatggataatgtataatgtctgcaaggtccggggttcaaaccccgaccaccac 24023698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 37999484 - 37999435
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  37999484 ctcgtgagcttaactcagttggtatggataatgcataatatatgcaaggt 37999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 493
Target Start/End: Original strand, 10152453 - 10152525
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacc 493  Q
    |||||||||||| |||||||||||| || ||||||||| |||||| |||||  |||||| ||||||| |||||    
T  10152453 ctcgtgagcttagctcagttggtatagacaatgtataaaatatgcaaggtttgaggttcgaactccggccacc 10152525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 422 - 482
Target Start/End: Original strand, 10982724 - 10982784
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaa 482  Q
    |||||||||||||||||||||||| || ||| |||||||||||| ||||||  ||||||||    
T  10982724 tcgtgagcttaactcagttggtatggacaatatataatatatgcaaggttcggggttcaaa 10982784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 15001337 - 15001265
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||| | || |||| |||| |||||| |||| |||||||||||| ||| |||||||    
T  15001337 cgtgagcttaactcagttggtttcgacaatgcataaaatatgcaaggtccaaggttcaaaccccggccaccac 15001265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 19163606 - 19163526
Alignment:
Q  415 atcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||| |||||||||||| |||||||||||| || |||| ||||| ||||| |||| |  ||||||||| |||||||||||    
T  19163606 atcgtcctcgtgagcttagctcagttggtatggacaatgcataatttatgcaaggtccggggttcaaaccccgaccaccac 19163526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 39139060 - 39138988
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||| |||||||||| || |||||| |||| |||||  ||||||  |||||||||||||||||||||    
T  39139060 cgtgagcttagctcagttggttttaataatgcataaaatatgtaaggttcggggttcaaactccgaccaccac 39138988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 422 - 472
Target Start/End: Complemental strand, 12249548 - 12249498
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttc 472  Q
    |||||||||||||||| ||||||  ||||||||||||||||||| ||||||    
T  12249548 tcgtgagcttaactcaattggtaaagataatgtataatatatgcaaggttc 12249498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 14303162 - 14303232
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    |||||||| ||| |||||||||||| || |||||||||||||| | |||| |||||||| ||| |||||||    
T  14303162 ctcgtgagtttagctcagttggtatggacaatgtataatatatacaaggtccaaggttcgaaccccgacca 14303232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 425 - 495
Target Start/End: Complemental strand, 30417670 - 30417600
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| |||||||||||| || ||||||||||||||||  |||||  ||||||||| ||| |||||||    
T  30417670 tgagcttagctcagttggtatagacaatgtataatatatgcatggttcggggttcaaaccccgtccaccac 30417600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 429 - 495
Target Start/End: Original strand, 37141362 - 37141428
Alignment:
Q  429 cttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||| ||||||||||| || |||| ||||||||||| ||||||  ||||||||||||| |||||||    
T  37141362 cttaattcagttggtatggacaatgcataatatatgcaaggttcggggttcaaactccggccaccac 37141428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 11708983 - 11709056
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||||||| |||||||||||  || |||| ||||||||||| |||| | | |||||||| ||||||||||    
T  11708983 ctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccacca 11709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 27134483 - 27134410
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||| ||||||||||||||||  | |||||||||||||||| | || |  ||||||||||||||| |||||    
T  27134483 tcgtgagtttaactcagttggtatgaacaatgtataatatatgcaaagtccggggttcaaactccgacaaccac 27134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 27718958 - 27718885
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||||||| |||||||| ||| || |||| ||||||||||| |||| |   |||||||||||||||||||    
T  27718958 ctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcaaactccgaccacca 27718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 28084279 - 28084351
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    ||||||||||||||||||||| ||  || |||| ||||||||||| |||||| | ||||||||| |||||||||    
T  28084279 ctcgtgagcttaactcagttgatagagacaatgaataatatatgcaaggttcgatgttcaaact-cgaccacca 28084351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 33451413 - 33451364
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||| ||||    
T  33451413 ctcgtgagcttagctcagttggtatggataatgcataatatatgcaaggt 33451364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 34420933 - 34420852
Alignment:
Q  414 aatcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||| | ||||||||||||||| ||||||| || |||| |||| |||||| |||||  ||||||||||  ||||||||||    
T  34420933 aatcgtccacgtgagcttaactcaattggtatggacaatgcataaaatatgcaaggtttgaggttcaaacctcgaccaccac 34420852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 408 - 489
Target Start/End: Original strand, 40482323 - 40482404
Alignment:
Q  408 acataaaatcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgac 489  Q
    |||||| || || ||||||||||||| | ||||||||| |||||| |||||| ||||| |||| |  |||||||||||||||    
T  40482323 acataacattgtcctcgtgagcttaatttagttggtatagataatatataatgtatgcaaggtccggggttcaaactccgac 40482404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 43778025 - 43778090
Alignment:
Q  430 ttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||| || |||| |||| |||||| ||||   ||||||||||||||||||||||    
T  43778025 ttaactcagttggtatagacaatgcataaaatatgcaaggtctgaggttcaaactccgaccaccac 43778090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 14279633 - 14279561
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||| |||||||||||||||| || |||| |||| |||||| ||||||  ||||| ||||| |||||||||    
T  14279633 cgtgagtttaactcagttggtatagacaatgcataaaatatgcaaggttcggggttcgaactctgaccaccac 14279561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 479
Target Start/End: Original strand, 36919310 - 36919366
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    ||||||||||||||||||||||   | |||||||||||||||  |||||||||||||    
T  36919310 cgtgagcttaactcagttggtaagaacaatgtataatatatgtaaggttcaaggttc 36919366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 418 - 486
Target Start/End: Original strand, 42700499 - 42700567
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactcc 486  Q
    ||||||||||||||||||| |||||||  || |||| ||||||||||| ||||   |||||||||||||    
T  42700499 gttctcgtgagcttaactcggttggtagagacaatgcataatatatgcaaggtatgaggttcaaactcc 42700567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 483
Target Start/End: Original strand, 32421569 - 32421628
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||||||||||||| || ||| |||||||||||| |||| |  |||||||||    
T  32421569 gtgagcttaactcagttggtatggacaatatataatatatgcaaggtccggggttcaaac 32421628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Complemental strand, 8717539 - 8717477
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||| ||| |||||||||||| || |||| ||||||||||| ||||||  |||||||||    
T  8717539 ctcgtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaac 8717477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 479
Target Start/End: Complemental strand, 10732839 - 10732781
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    ||||||||||||||||| |||||||  | |||| ||||||||| | |||||||||||||    
T  10732839 ctcgtgagcttaactcaattggtatgaacaatgcataatatatacaaggttcaaggttc 10732781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 12061604 - 12061658
Alignment:
Q  441 ggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||| || ||| |||||||||||| ||||||| |||||||| ||||||||||||    
T  12061604 ggtatggacaatatataatatatgcaaggttcagggttcaaagtccgaccaccac 12061658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 13004156 - 13004206
Alignment:
Q  415 atcgttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||||| |||||||||||||||||||||||| || |||| |||| ||||||    
T  13004156 atcgttttcgtgagcttaactcagttggtatggacaatgcataaaatatgc 13004206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 29376898 - 29376972
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||||| || ||||  |||||||||| ||||     |||||||| |||||||||||    
T  29376898 ctcgtgagcttaactcagttggtatggacaatgcgtaatatatgcaaggtctggagttcaaaccccgaccaccac 29376972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 37938492 - 37938562
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    |||||||| ||| |||||||||||| ||||||| ||||||||||| | || | |||||||||  |||||||    
T  37938492 ctcgtgagtttagctcagttggtatggataatgcataatatatgcaaagtccgaggttcaaatcccgacca 37938562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 1342721 - 1342766
Alignment:
Q  419 ttctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    ||||||||||||||||||||||||||  |||| |||||| ||||||    
T  1342721 ttctcgtgagcttaactcagttggtagagatactgtatattatatg 1342766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 1877726 - 1877677
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||| ||| || |||| ||||||||||| ||||    
T  1877726 ctcgtgagcttaactcagttgatatagacaatgcataatatatgcaaggt 1877677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 2188543 - 2188592
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||| || |||| ||| ||||||| ||||    
T  2188543 ctcgtgagcttaactcagttggtatggacaatggatagtatatgcaaggt 2188592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 495
Target Start/End: Original strand, 3650518 - 3650591
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||   | |||| ||||||||||  ||||||  ||||||||| ||| |||||||    
T  3650518 tcgtgagcttaactcagttggtagaaaaaatgcataatatatgtaaggttcggggttcaaaccccggccaccac 3650591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 6447186 - 6447235
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||| |||||||||||||||| || |||| ||||||||||| ||||    
T  6447186 ctcgtgagtttaactcagttggtatggacaatgcataatatatgcaaggt 6447235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 426 - 483
Target Start/End: Original strand, 18959151 - 18959208
Alignment:
Q  426 gagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||| ||| ||  ||||||| ||||||||||| |||||| ||||||||||    
T  18959151 gagcttaactcaattgttagggataatgcataatatatgcaaggttcgaggttcaaac 18959208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 21557430 - 21557503
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||||||||||||||| |||| || |||| ||||||||||  |||| | |||||| ||  ||||||||||    
T  21557430 ctcgtgagcttaactcagttagtatggacaatgcataatatatgtaaggtccgaggttcgaatcccgaccacca 21557503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 495
Target Start/End: Original strand, 28580938 - 28581015
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||  ||||||||||||  |||||| |||| |||||  ||||||  ||||||||  |||||||||||    
T  28580938 gttctcgtgagcttggctcagttggtatgaataatgcataaaatatgtaaggttcggggttcaaatcccgaccaccac 28581015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 426 - 495
Target Start/End: Complemental strand, 32944899 - 32944830
Alignment:
Q  426 gagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||||||||||||| || |||| |||| |||||| ||||   |||||||||| |||||||||||    
T  32944899 gagcctaactcagttggtatggacaatgcataaaatatgcaaggtctgaggttcaaaccccgaccaccac 32944830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 33996075 - 33996140
Alignment:
Q  430 ttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||||||||  || |||| ||||||||||| | ||||  |||||||||||||||||||||    
T  33996075 ttaaatcagttggtagagacaatgcataatatatgcaaagttcggggttcaaactccgaccaccac 33996140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 426 - 495
Target Start/End: Original strand, 40167324 - 40167393
Alignment:
Q  426 gagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||| || |||| ||||||||| | ||||||  | ||||||| ||| |||||||    
T  40167324 gagcttaactcagttggtatggacaatgcataatatatacaaggttcgggattcaaaccccggccaccac 40167393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 450 - 495
Target Start/End: Original strand, 41472504 - 41472549
Alignment:
Q  450 aatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||| |||||| ||||| ||| ||||||||||||    
T  41472504 aatgtataatatatgcaaggttcgaggtttaaattccgaccaccac 41472549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 416 - 465
Target Start/End: Complemental strand, 44224265 - 44224216
Alignment:
Q  416 tcgttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||| ||||||||||||||||| ||||||| |||||| ||||| ||||||    
T  44224265 tcgtcctcgtgagcttaactcaattggtatagataatatataaaatatgc 44224216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 495
Target Start/End: Original strand, 40520753 - 40520823
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||| |||| ||||||| |||| |||||| |||| ||| |||||||| |||||||||||    
T  40520753 tgagcttaactcagtttgtatggataatgcataaaatatgcaaggtccaaagttcaaaccccgaccaccac 40520823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 51882262 - 51882190
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||| || |||| ||||||||||| || | || ||||||||| ||| |||||||    
T  51882262 cgtgagcttaactcagttggtatggacaatgcataatatatgcaagatccagggttcaaaccccggccaccac 51882190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 552174 - 552245
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||  |||| || ||||||||||| |||| || ||||||||| |||||| ||||    
T  552174 gtgagcttaactcagttggtagggatattgcataatatatgcaaggtccagggttcaaaccccgacctccac 552245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 16980418 - 16980347
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||| |||||||||||  || |||| ||||||||||| ||||||| ||||||||  ||||||||    
T  16980418 ctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcatggttcaaatcccgaccac 16980347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 424 - 495
Target Start/End: Complemental strand, 38131020 - 38130949
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||| || |||| ||||||||||| |||| |  ||||||||| ||| |||||||    
T  38131020 gtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 38130949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 7464555 - 7464481
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||||  || |||| ||||||||||  |||| |  ||||||||| |||||||||||    
T  7464555 ctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 7464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 21967547 - 21967597
Alignment:
Q  415 atcgttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||| ||||||||||||||||||||||||  || ||||||||||||||||    
T  21967547 atcgtactcgtgagcttaactcagttggtaaggacaatgtataatatatgc 21967597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 21989983 - 21990033
Alignment:
Q  415 atcgttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||| ||||||||||||||||||||||||  || ||||||||||||||||    
T  21989983 atcgtactcgtgagcttaactcagttggtaaggacaatgtataatatatgc 21990033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 28148528 - 28148470
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||| |||||||||||   ||||||||||| |||||| |||||||||||||||||    
T  28148528 tgagcttagctcagttggtaagaataatgtataaaatatgcaaggttcaaggttcaaac 28148470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 30050492 - 30050418
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||| |||||||| |||| || |||| ||||||||||| || |||  ||||||||||||| |||||||    
T  30050492 ctcgtgagcttgactcagttagtatggacaatgcataatatatgcaagattcgcggttcaaactccggccaccac 30050418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 416 - 470
Target Start/End: Original strand, 33771682 - 33771736
Alignment:
Q  416 tcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||| ||||||||||||||||||||||||  || |||||||||||||||| ||||    
T  33771682 tcgtcctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaaggt 33771736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 487
Target Start/End: Original strand, 46903905 - 46903971
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccg 487  Q
    |||||||| |||||||||||||||| || |||| ||||||||||  |||| || |||||||||||||    
T  46903905 ctcgtgagattaactcagttggtatggacaatgcataatatatgtaaggtccagggttcaaactccg 46903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 491
Target Start/End: Complemental strand, 49082773 - 49082703
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    ||||||||||||| ||||||||||| || ||||||| |||||||| |||| |  ||||||||| |||||||    
T  49082773 ctcgtgagcttaaatcagttggtatggacaatgtatgatatatgcaaggtccggggttcaaaccccgacca 49082703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 483
Target Start/End: Original strand, 32651638 - 32651703
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||| ||||||||||||| ||   |||| ||||||||||||| ||||||| |||||||||    
T  32651638 gttctcgtgaacttaactcagttgatagaaataacgtataatatatgcaaggttcatggttcaaac 32651703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 47377412 - 47377351
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||||||||||||||  || |||| ||||||||| | |||||| ||||||||||    
T  47377412 tcgtgagcttaactcagttggtaaggacaatgcataatatatacaaggttcgaggttcaaac 47377351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 48849829 - 48849753
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||| ||||||||||||||||||||| ||| |||| ||||||||||| |||| |  ||||||||| ||| |||||||    
T  48849829 gttcttgtgagcttaactcagttggta-tgacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 48849753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 495
Target Start/End: Original strand, 50037309 - 50037382
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||| |||||||||||| || |||| ||||| ||||| ||||||  ||||||||||||  |||||||    
T  50037309 tcgtgagcttagctcagttggtatggacaatgcataatgtatgcaaggttcggggttcaaactccagccaccac 50037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 10843848 - 10843796
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||||||  |||||  ||||||||||| ||||    
T  10843848 gttctcgtgagcttaactcagttggtatgaataatacataatatatgcaaggt 10843796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 479
Target Start/End: Complemental strand, 27397674 - 27397618
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    |||||| |||||||||||||||| || |||||||||||||||| ||||  |||||||    
T  27397674 cgtgagtttaactcagttggtatggacaatgtataatatatgcaaggtctaaggttc 27397618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 51250297 - 51250253
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||||||||||||||||||||||  || ||||||||||||||||    
T  51250297 ctcgtgagcttaactcagttggtaaggacaatgtataatatatgc 51250253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 495
Target Start/End: Complemental strand, 1707809 - 1707738
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||  ||||||||||| |||||  |||| |   |||||||| |||||||||||    
T  1707809 gtgagcttaactcagttggtatgaataatgtataaaatatgtaaggtgcggcgttcaaaccccgaccaccac 1707738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 4332731 - 4332660
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||| |||||||||| |  |||||| ||||||||| | |||| |  ||||||||||||||||||    
T  4332731 ctcgtgagcttagctcagttggtttgaataatgcataatatatccaaggtccggggttcaaactccgaccac 4332660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 465
Target Start/End: Complemental strand, 7974575 - 7974532
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||    
T  7974575 tcgtgagcttagctcagttggtatggataatgcataatatatgc 7974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 21628952 - 21628881
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||| |||||||||| | ||||||| ||||||||| | | || |  ||||||||||||||||||    
T  21628952 ctcgtgagcttagctcagttggtttggataatgcataatatatccaacgtccggggttcaaactccgaccac 21628881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Original strand, 42372517 - 42372588
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||||||| |||||| | ||||||| || |||||| | |||| |  ||||||||||||||||||    
T  42372517 ctcgtgagcttaactcggttggtttggataatgcatgatatatccaaggtccggggttcaaactccgaccac 42372588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 418 - 465
Target Start/End: Complemental strand, 43796904 - 43796857
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgc 465  Q
    |||| ||||||||||||||||||||||| || ||||||||||| ||||    
T  43796904 gttcccgtgagcttaactcagttggtatggacaatgtataatacatgc 43796857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 48315088 - 48315017
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||| |||||||||||  ||||||| ||||||||||| |||| |  ||||||||  ||||||||    
T  48315088 ctcgtgagcttagctcagttggtaaggataatgcataatatatgcaaggtccggggttcaaatcccgaccac 48315017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 48944424 - 48944346
Alignment:
Q  416 tcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| |||||||||||| ||||||||  || || |||| ||||||||||| | | ||| |||||||||||||||||||||    
T  48944424 tcgtactcgtgagcttatctcagttgcaatggacaatgcataatatatgc-aagatcagggttcaaactccgaccaccac 48944346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 464
Target Start/End: Complemental strand, 53633681 - 53633638
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatg 464  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||    
T  53633681 ctcgtgagcttaactcagttggtaaggataatgcataatatatg 53633638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 418 - 484
Target Start/End: Original strand, 2078234 - 2078300
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaact 484  Q
    |||||||||| ||||||||||||||||  || |||| ||||||||||| |||||   ||||||||||    
T  2078234 gttctcgtgaacttaactcagttggtagagacaatgcataatatatgcaaggtttggggttcaaact 2078300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 482
Target Start/End: Complemental strand, 12043161 - 12043099
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgta-taatatatgcgaggttcaaggttcaaa 482  Q
    ||||||||||||||||||||||||  || |||| | |||||||||| |||||| |||||||||    
T  12043161 ctcgtgagcttaactcagttggtaaggacaatgcattaatatatgcaaggttcgaggttcaaa 12043099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Complemental strand, 16793038 - 16792976
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||| | |||||||||| || |||| ||||||||||| |||| || |||||||||    
T  16793038 ctcgtgagcttagcacagttggtatagacaatgcataatatatgcaaggtccagggttcaaac 16792976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 424 - 470
Target Start/End: Original strand, 19468451 - 19468497
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||||||||||||| || |||| ||||||||||| ||||    
T  19468451 gtgagcttaactcagttggtatggacaatgcataatatatgcaaggt 19468497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 22722399 - 22722473
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| ||||||| ||||  | |||| |||| |||||| |||| | |||||||||| |||||||||||    
T  22722399 ctcgtgagcttagctcagttagtatgaacaatgcataaaatatgcaaggtccgaggttcaaaccccgaccaccac 22722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 25340988 - 25340914
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||||| || |||| |||| |||||| |||| |  ||||||||| ||| |||||||    
T  25340988 ctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 25340914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 425 - 495
Target Start/End: Original strand, 29631187 - 29631257
Alignment:
Q  425 tgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| |||||||||||| || |||| ||||||||||| ||||||  | ||||||| ||| |||||||    
T  29631187 tgagcttagctcagttggtatggacaatgcataatatatgcaaggttcgggattcaaaccccggccaccac 29631257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 29687079 - 29687153
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||| ||| || ||| |||| ||||||| ||||| ||||||||||  |||| ||||||    
T  29687079 ctcgtgagcttagctcagttgatatggacaatatatattatatgcaaggtttaaggttcaaatcccgatcaccac 29687153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 424 - 470
Target Start/End: Original strand, 37465360 - 37465406
Alignment:
Q  424 gtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||| |||  ||||||||||||||||||| ||||    
T  37465360 gtgagcttaactcagtttgtaacgataatgtataatatatgcaaggt 37465406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 418 - 492
Target Start/End: Original strand, 40715325 - 40715399
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||| ||||||||||| ||||| || ||||||||||||||||||   |||||  |  ||||||||||||||||    
T  40715325 gttctcttgagcttaacttagttgataatgataatgtataatatatataaggtttgatattcaaactccgaccac 40715399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 45309207 - 45309133
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||||||||  | ||| |||||||||| | |||||  |||||| |||| || |||||||    
T  45309207 ctcgtgagcttaactcagttggtataaacaatttataatatatacaaggtttgaggttcgaacttcggccaccac 45309133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 422 - 492
Target Start/End: Complemental strand, 52337409 - 52337339
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||| |||||||||||||||    ||||||||||| |||||| ||||||  | ||||||||||||||||    
T  52337409 tcgtgaacttaactcagttggtcggaataatgtataaaatatgcaaggttcgggtttcaaactccgaccac 52337339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 2105762 - 2105713
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||| ||||||||||||||||   |||||||||||||||||| ||||    
T  2105762 ctcgtgaacttaactcagttggtaaaaataatgtataatatatgcaaggt 2105713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 7557598 - 7557549
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||| || |||| ||||| ||||| ||||    
T  7557598 ctcgtgagcttaactcagttggtatggacaatgcataatgtatgcaaggt 7557549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 438 - 495
Target Start/End: Complemental strand, 8136679 - 8136622
Alignment:
Q  438 gttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||| ||  ||| ||||||||||| |||| |||||||||||| |||||||||||    
T  8136679 gttggtatggacgatgcataatatatgcaaggtccaaggttcaaaccccgaccaccac 8136622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 10498759 - 10498710
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| ||||    
T  10498759 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggt 10498710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 491
Target Start/End: Original strand, 21549036 - 21549105
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacca 491  Q
    |||| |||||| |||||||| ||| || |||||||||||||||| ||||| | ||||| ||| |||||||    
T  21549036 tcgtaagcttagctcagttgatatggacaatgtataatatatgcaaggtttagggttcgaaccccgacca 21549105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 32909368 - 32909291
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||| |||| || |||| |||| |||||| |||| |  ||||||||  ||| |||||||    
T  32909368 gttctcgtgagcttaactcagttagtatggacaatgcataaaatatgcaaggtcctgggttcaaatcccggccaccac 32909291  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 48022369 - 48022304
Alignment:
Q  430 ttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||| ||||||||||  || |||| ||||||||||| | ||||  |||||||||||||||||||||    
T  48022369 ttaaatcagttggtagagacaatgcataatatatgcaaagttcggggttcaaactccgaccaccac 48022304  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 418 - 487
Target Start/End: Original strand, 49710714 - 49710783
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccg 487  Q
    |||||| |||||||||||||||||||||| | |||| |||| |||||| |||| |   ||||||||||||    
T  49710714 gttctcatgagcttaactcagttggtattaacaatgcataaaatatgcaaggtccggagttcaaactccg 49710783  T

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Target: scaffold0118 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 483
Target Start/End: Original strand, 39995 - 40057
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaac 483  Q
    |||||||||||| |||||||||||| || |||| ||||||||||| |||||  ||||||||||    
T  39995 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggttagaggttcaaac 40057  T

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Target: scaffold0118; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 40307 - 40382
Alignment:
Q  421 ctcgtgagcttaactcagttggtattg-ataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||| |||||||||| ||| | |||| |||| ||||||  ||| | ||||||||||||||||||||||    
T  40307 ctcgtgagcttatctcagttggttttgcacaatgcataaaatatgcatggtccgaggttcaaactccgaccaccac 40382  T

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Target: scaffold0122 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 14253 - 14176
Alignment:
Q  418 gttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||| ||||||||||||||||  | |||| ||||||||||| ||||    ||||||||| |||||||||||    
T  14253 gttctcgtgagtttaactcagttggtatgaacaatgcataatatatgcaaggtatgtggttcaaaccccgaccaccac 14176  T

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Target: scaffold0040 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 56781 - 56830
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    |||||||||||| |||||||||||| || |||||||||||||||| ||||    
T  56781 ctcgtgagcttagctcagttggtatggacaatgtataatatatgcaaggt 56830  T

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Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 58850 - 58919
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgacc 490  Q
    |||||||||||| |||||||||||| ||||||| ||||| ||| | |||| | ||||| |||| ||||||    
T  58850 ctcgtgagcttagctcagttggtatggataatgcataatgtatacaaggtccgaggtttaaaccccgacc 58919  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 495
Target Start/End: Original strand, 7724 - 7793
Alignment:
Q  426 gagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    |||||||||||||||||||| || |||| |||| | |||| |||| | |||||||||| |||||||||||    
T  7724 gagcttaactcagttggtatggacaatgcataaaacatgcaaggtccgaggttcaaaccccgaccaccac 7793  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 61632 - 61560
Alignment:
Q  423 cgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccaccac 495  Q
    ||||||||||||||||||||||  ||||||| ||||| ||||  |||| || ||||||||| ||| |||||||    
T  61632 cgtgagcttaactcagttggtaaggataatgcataatgtatgtaaggtccagggttcaaaccccggccaccac 61560  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 492
Target Start/End: Original strand, 75181 - 75252
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataat-atatgcgaggttcaaggttcaaactccgaccac 492  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||| |||| ||  |||| ||| ||||||||    
T  75181 tcgtgagcttaactcagttggtatggataatgcataataatatgcaaggtccagagttcgaaccccgaccac 75252  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 413 - 479
Target Start/End: Complemental strand, 34960 - 34894
Alignment:
Q  413 aaatcgttctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttc 479  Q
    |||| |||| ||||||||||||||||||||||  || |||| ||||||||||| |||| || |||||    
T  34960 aaattgttcacgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccagggttc 34894  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 15994 - 15945
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||| ||||||  || |||||||||||||||| ||||    
T  15994 ctcgtgagcttaactcaattggtaaggacaatgtataatatatgcaaggt 15945  T

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Target: scaffold0035 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 73584 - 73511
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggttcaaggttcaaactccgaccacca 494  Q
    |||||||||||||||| ||| ||||||| |||| ||| | ||||| | || |  ||||||||||||||||||||    
T  73584 ctcgtgagcttaactcggttagtattgacaatgcatagtgtatgcaatgtccggggttcaaactccgaccacca 73511  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 463
Target Start/End: Complemental strand, 63683 - 63642
Alignment:
Q  422 tcgtgagcttaactcagttggtattgataatgtataatatat 463  Q
    |||||||||||||||| ||||||| ||||||| |||||||||    
T  63683 tcgtgagcttaactcaattggtatggataatgcataatatat 63642  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 1568 - 1617
Alignment:
Q  421 ctcgtgagcttaactcagttggtattgataatgtataatatatgcgaggt 470  Q
    ||||||||||||||||||||||||  |||| || ||||||||||| ||||    
T  1568 ctcgtgagcttaactcagttggtaacgatagtgcataatatatgcaaggt 1617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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