View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4867-Insertion-6 (Length: 610)
Name: NF4867-Insertion-6
Description: NF4867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4867-Insertion-6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 569; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 6 - 610
Target Start/End: Complemental strand, 40518151 - 40517547
Alignment:
| Q |
6 |
cattcaatgtatgccacagtgaacgcaggccaataatatagggattccaatgatatattatatggtataccaatttaatgataatttagtgaaaagtaga |
105 |
Q |
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| T |
40518151 |
cattcaatgtatgccacagtgaacgcaggccaataatatagggattccaatgatatattatatggtataccaatttaatgataatttagtgaaaagtaga |
40518052 |
T |
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| Q |
106 |
gaacagaaaaaactttactactctttttggtgaatttccttccagcagagctagcttggttaaacacgagatttgatcagacgttagtaaatgtgatatt |
205 |
Q |
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| T |
40518051 |
gaacaaaaaaaactttactactctttttggtgaatttccttccagcagagctagcttggttaaacacgagatttgatcagacgttagtaaatgtgatatt |
40517952 |
T |
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| Q |
206 |
tagtattagcaggcaggtgacgagatcacacacaacaagtcttgaaggtagtattatatttataggctcctatggaatctttaaaactagtacttattat |
305 |
Q |
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| T |
40517951 |
tagtattagcaggcaggtgacgagatcagacacaacaagtcttgaaggtagtattatatttataggctcctatggaatctttaaaactagtacttattat |
40517852 |
T |
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| Q |
306 |
ttatttttgctgattaaacaaaccagagcttgaaaatgtttaatatattgatgaagagttttttcaccgactatcgagatcctacttgatttgaatgatt |
405 |
Q |
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| T |
40517851 |
ttgtttttgctgattaaacaaaccagagcttgaaaatgtttaatatattgatgaagatttttttcaccgactatcgagatcctacttgatttgaatgatt |
40517752 |
T |
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| Q |
406 |
agtcaccgtagttgtaccctcaaagaataagcttaaaagagtttaggtttataattagttgatatggttaagtgctttataacaaattttaataattagt |
505 |
Q |
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| T |
40517751 |
agtcactgtagttgtaccctcaaagaataagcttaaaagagtttaggtttataattagttgatatggttaagtgttttataacaaattttaataattagt |
40517652 |
T |
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| Q |
506 |
tgttaaaaataatatctattctttcgtataagtttgaacttttaactcaaatcggtcgagttacacaacctcctcctaagttgttaattgattcaatcct |
605 |
Q |
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| T |
40517651 |
tgttaaaaataatatttattctttcgtataagtttgaacttttaacttaaatcgatcgagttacacaacctcctcctaagttgttaattgattcaatcct |
40517552 |
T |
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| Q |
606 |
aaatt |
610 |
Q |
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| T |
40517551 |
aaatt |
40517547 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 34464680 - 34464625
Alignment:
| Q |
8 |
ttcaatgtatgccacagtgaacgcaggccaataatatagggattccaatgatatat |
63 |
Q |
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| T |
34464680 |
ttcaatgcatcccacagtgaacacatgccaataatatagggattccaatgatatat |
34464625 |
T |
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