View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4868-Insertion-18 (Length: 184)
Name: NF4868-Insertion-18
Description: NF4868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4868-Insertion-18 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 137; Significance: 9e-72; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 34674202 - 34674378
Alignment:
| Q |
8 |
ctactaacatatctatagtgcgcaagataagggccctttttctaaatgttatcagaagagaccaatattgagtacgtccttatattaaatttcacggcac |
107 |
Q |
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| T |
34674202 |
ctactaacatatgtatagtgcgcaagataagggctctttttctaaatgttatcagaagagaccaatactgagtacgtccttatattaaatttcacggcac |
34674301 |
T |
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| Q |
108 |
tcatttgttatcaaaatgtagnnnnnnnnttaaaatattataaggtcctattcatgacctaattcattcctctaatg |
184 |
Q |
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||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34674302 |
tcatttgttatcaaaatgttgaaaaaaaattaaaatattataaggtcctattcatgacctaattcattcctctaatg |
34674378 |
T |
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