View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4868-Insertion-21 (Length: 207)
Name: NF4868-Insertion-21
Description: NF4868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4868-Insertion-21 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 33748607 - 33748724
Alignment:
| Q |
90 |
aagcgaacctcatttagcttactgttgggttatatggaagggaagcatgggccaatgtttaagtcggcaatgcaattgcaaatgcaaacaaatacaaaag |
189 |
Q |
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| T |
33748607 |
aagcgaacctcctttagcttagtgttgggttgcacggaagggaagcatgggccaatgtttaagtcggcaatgcaattgcaaatgcaaacaaatacaaaag |
33748706 |
T |
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| Q |
190 |
catcaagaatcacctttg |
207 |
Q |
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| T |
33748707 |
catcaagaatcacctttg |
33748724 |
T |
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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 33748506 - 33748553
Alignment:
| Q |
8 |
atatactccaatagtattgatatgtaatccctccaatctcaaatataa |
55 |
Q |
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| T |
33748506 |
atatactccaatagtattggcatgtactccctccaatctcaaatataa |
33748553 |
T |
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