View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4870-Insertion-7 (Length: 486)
Name: NF4870-Insertion-7
Description: NF4870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4870-Insertion-7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 7 - 486
Target Start/End: Complemental strand, 39072791 - 39072320
Alignment:
| Q |
7 |
aacaacgctgcttataaataatagttaactcacacacatgtgtgaagaagaagagaggagataattaatgtgaaggagtagaaattaaggagattgtggt |
106 |
Q |
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| T |
39072791 |
aacaacgctacttataaataatagttaacgcacaca--tgtgtgaagaaga-----ggagataattaatgtgaaggagtagaaattaaggagattgaggt |
39072699 |
T |
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| Q |
107 |
taaaaatatattaccaagcttgaaagnnnnnnnnnattgttgtattgtatatgaaacgttgaagaaggtttttgatggttgaaaaggagggtagagggta |
206 |
Q |
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| T |
39072698 |
taaaaatatattacctagcttgaaagtttttttt-attgttgtattgtatatgaaacgttgaagaaggtttttgatggttgaaaaagagggtagagggta |
39072600 |
T |
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| Q |
207 |
tagagggggcccaaaaggaaaggagagaattgagaaagaaaagggaaagtaatttatatatgtaggaaggggtttttactgaaaggggagtcactgcaaa |
306 |
Q |
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| T |
39072599 |
tagagggggcccaaaaggaaaggagagaattgagaaagaaaagggaaagtaatttatatatgtaggaaggggtttttactgaaaggggagtcactgcaaa |
39072500 |
T |
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| Q |
307 |
aagcatgtagacaaatgaatgaaaagaaaaggtagtgcatggtgcagtgcagcaaattaaagtggttgaattgaattgaacgaatgtagttctacaaagt |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39072499 |
aagcatgtagacaaatgaatgaaaagaaaaggtagtgcatggtgcagtgcagcaaattaaagtggttgaattgaattgaacgaatgtagttctacaaagt |
39072400 |
T |
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| Q |
407 |
catgagattgatccatatacctagctatagcccctcctatcccaacttcaaaaatactagtctagttcagttcatagtta |
486 |
Q |
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| T |
39072399 |
catgagattgatccatatacctagctatagcccctcctatcccaacttcaaaaatactagtctagttcagttcatagtta |
39072320 |
T |
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