View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4870_low_1 (Length: 1570)

Name: NF4870_low_1
Description: NF4870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4870_low_1
NF4870_low_1
[»] chr4 (43 HSPs)
chr4 (15-1551)||(50741903-50743444)
chr4 (903-1080)||(2996510-2996689)
chr4 (977-1092)||(8422867-8422982)
chr4 (908-1084)||(1137645-1137823)
chr4 (903-1034)||(7693965-7694095)
chr4 (917-1036)||(28300267-28300386)
chr4 (911-1036)||(50681050-50681176)
chr4 (977-1071)||(17884014-17884110)
chr4 (948-1085)||(6466045-6466184)
chr4 (930-1071)||(20936210-20936353)
chr4 (983-1094)||(3891500-3891611)
chr4 (908-1005)||(17751106-17751200)
chr4 (909-1012)||(21043195-21043298)
chr4 (903-946)||(22471347-22471390)
chr4 (911-1012)||(1706629-1706731)
chr4 (902-944)||(4071953-4071995)
chr4 (965-1072)||(10192229-10192337)
chr4 (948-1018)||(11264302-11264372)
chr4 (903-956)||(3549509-3549562)
chr4 (908-1013)||(4798525-4798630)
chr4 (903-1101)||(21157684-21157884)
chr4 (1036-1093)||(51555956-51556013)
chr4 (927-1018)||(17822842-17822934)
chr4 (982-1013)||(7730630-7730661)
chr4 (982-1013)||(11262796-11262827)
chr4 (903-1005)||(36577496-36577599)
chr4 (977-1012)||(39063675-39063710)
chr4 (977-1016)||(51044508-51044547)
chr4 (911-1089)||(1965868-1966048)
chr4 (911-1001)||(6987703-6987793)
chr4 (911-1012)||(24169270-24169372)
chr4 (909-943)||(32278369-32278403)
chr4 (1054-1092)||(32920505-32920543)
chr4 (1036-1090)||(47970245-47970299)
chr4 (908-986)||(48719350-48719428)
chr4 (903-1036)||(52746793-52746927)
chr4 (870-1070)||(679663-679865)
chr4 (916-961)||(1554975-1555020)
chr4 (1054-1099)||(2980578-2980623)
chr4 (1044-1093)||(4191663-4191712)
chr4 (948-1005)||(19422412-19422469)
chr4 (1054-1099)||(46796936-46796981)
chr4 (911-944)||(49940128-49940161)
[»] chr3 (56 HSPs)
chr3 (903-1087)||(44295462-44295643)
chr3 (917-1036)||(21367650-21367770)
chr3 (927-1093)||(1816506-1816675)
chr3 (903-1137)||(30573868-30574100)
chr3 (868-1010)||(45541580-45541724)
chr3 (948-1077)||(24785145-24785276)
chr3 (907-1018)||(14548679-14548790)
chr3 (903-1085)||(20192560-20192744)
chr3 (903-1012)||(37273141-37273250)
chr3 (903-1081)||(49465619-49465797)
chr3 (916-1005)||(50952347-50952436)
chr3 (916-1037)||(54837001-54837122)
chr3 (911-1018)||(18405792-18405900)
chr3 (948-1018)||(3044258-3044328)
chr3 (871-1002)||(24281064-24281197)
chr3 (932-1012)||(39602193-39602273)
chr3 (911-1018)||(39980730-39980838)
chr3 (868-961)||(44014715-44014810)
chr3 (903-943)||(50211811-50211851)
chr3 (896-959)||(20194980-20195043)
chr3 (977-1032)||(22203417-22203472)
chr3 (910-1009)||(27896131-27896230)
chr3 (899-1009)||(2152128-2152238)
chr3 (916-1010)||(21574499-21574593)
chr3 (906-1012)||(24624217-24624323)
chr3 (916-1018)||(40880915-40881017)
chr3 (908-1002)||(47513670-47513764)
chr3 (930-987)||(5391911-5391968)
chr3 (948-997)||(25925764-25925813)
chr3 (1036-1092)||(905059-905115)
chr3 (920-1012)||(20467157-20467249)
chr3 (948-1012)||(20669179-20669243)
chr3 (972-1012)||(24158526-24158566)
chr3 (1043-1099)||(25964360-25964416)
chr3 (907-1072)||(36646340-36646507)
chr3 (948-1012)||(40665436-40665500)
chr3 (1036-1096)||(41028940-41029000)
chr3 (967-1010)||(2825156-2825199)
chr3 (1054-1093)||(16790463-16790502)
chr3 (1036-1091)||(34958254-34958309)
chr3 (903-954)||(50760656-50760707)
chr3 (982-1012)||(24887316-24887346)
chr3 (869-943)||(25182908-25182981)
chr3 (903-961)||(25258830-25258888)
chr3 (918-992)||(33880526-33880599)
chr3 (869-944)||(47903998-47904075)
chr3 (903-941)||(50015964-50016002)
chr3 (918-992)||(53952075-53952149)
chr3 (903-956)||(2413633-2413686)
chr3 (911-1012)||(3845524-3845625)
chr3 (858-891)||(16072948-16072981)
chr3 (916-1005)||(23808031-23808120)
chr3 (967-1012)||(24280718-24280763)
chr3 (983-1012)||(44284114-44284143)
chr3 (915-1012)||(50600144-50600241)
chr3 (903-1013)||(52323848-52323960)
[»] chr8 (51 HSPs)
chr8 (918-1087)||(42215275-42215446)
chr8 (902-1018)||(39551162-39551278)
chr8 (915-1013)||(12851182-12851280)
chr8 (903-1012)||(11569411-11569520)
chr8 (948-1012)||(20672757-20672821)
chr8 (927-1013)||(26473730-26473816)
chr8 (918-1012)||(30389106-30389200)
chr8 (916-1013)||(7918413-7918510)
chr8 (999-1086)||(926418-926508)
chr8 (967-1011)||(1433556-1433600)
chr8 (915-1018)||(9956779-9956883)
chr8 (868-961)||(16162818-16162913)
chr8 (922-1012)||(1930042-1930133)
chr8 (1052-1137)||(4389826-4389908)
chr8 (927-1018)||(5088853-5088944)
chr8 (868-992)||(9700028-9700154)
chr8 (903-1010)||(30191095-30191202)
chr8 (933-1012)||(35220707-35220786)
chr8 (927-1013)||(2458544-2458630)
chr8 (917-994)||(10120781-10120859)
chr8 (1036-1098)||(14482121-14482183)
chr8 (978-1012)||(25097393-25097427)
chr8 (916-970)||(41442420-41442474)
chr8 (868-1099)||(28769256-28769491)
chr8 (977-1018)||(43709274-43709315)
chr8 (903-1012)||(44236777-44236886)
chr8 (903-943)||(2487962-2488002)
chr8 (972-1012)||(9836877-9836917)
chr8 (927-1078)||(13459585-13459737)
chr8 (903-1018)||(24558854-24558967)
chr8 (903-1055)||(34849065-34849220)
chr8 (911-994)||(35643949-35644033)
chr8 (920-1012)||(40071756-40071848)
chr8 (1056-1099)||(6918949-6918992)
chr8 (977-1012)||(27028838-27028873)
chr8 (965-1086)||(34522070-34522195)
chr8 (868-943)||(6526169-6526246)
chr8 (903-1078)||(7646145-7646322)
chr8 (903-1013)||(10923602-10923712)
chr8 (900-946)||(10939448-10939494)
chr8 (982-1077)||(13561345-13561442)
chr8 (903-1012)||(26410286-26410396)
chr8 (983-1012)||(6509337-6509366)
chr8 (977-1010)||(10075579-10075612)
chr8 (948-1009)||(11795102-11795163)
chr8 (902-1012)||(12361199-12361311)
chr8 (916-961)||(25097433-25097478)
chr8 (977-1018)||(34551121-34551162)
chr8 (903-956)||(34770931-34770984)
chr8 (993-1063)||(38537545-38537617)
chr8 (900-941)||(41398059-41398100)
[»] chr1 (62 HSPs)
chr1 (903-1008)||(31517694-31517799)
chr1 (918-1012)||(37811859-37811953)
chr1 (940-1078)||(36151496-36151636)
chr1 (868-1090)||(17269177-17269403)
chr1 (929-1013)||(35925696-35925780)
chr1 (903-1079)||(10199362-10199540)
chr1 (904-1010)||(4445717-4445823)
chr1 (903-1009)||(37593638-37593744)
chr1 (903-1011)||(49692006-49692112)
chr1 (1036-1095)||(870967-871026)
chr1 (967-1079)||(35017512-35017628)
chr1 (932-1018)||(25479582-25479668)
chr1 (964-1094)||(4200152-4200284)
chr1 (903-1032)||(7136952-7137081)
chr1 (948-1036)||(7472294-7472383)
chr1 (924-1013)||(24460382-24460471)
chr1 (903-1012)||(33723336-33723445)
chr1 (922-1070)||(3924571-3924721)
chr1 (903-1010)||(6279408-6279515)
chr1 (870-1012)||(172492-172639)
chr1 (964-1018)||(7218089-7218143)
chr1 (937-1096)||(10854654-10854815)
chr1 (928-1018)||(37842334-37842424)
chr1 (928-1010)||(43338125-43338207)
chr1 (903-1008)||(32515395-32515500)
chr1 (903-944)||(43371845-43371886)
chr1 (938-1010)||(5047155-5047227)
chr1 (906-1010)||(7262475-7262579)
chr1 (933-1013)||(11137851-11137930)
chr1 (932-1012)||(11639399-11639479)
chr1 (978-1018)||(25005826-25005866)
chr1 (873-1018)||(29723490-29723637)
chr1 (977-1013)||(38651459-38651495)
chr1 (982-1018)||(47598454-47598490)
chr1 (917-1012)||(4576812-4576907)
chr1 (931-1010)||(4699597-4699676)
chr1 (903-994)||(6292518-6292608)
chr1 (921-1012)||(10744308-10744399)
chr1 (977-1095)||(19389824-19389943)
chr1 (918-1005)||(28689421-28689508)
chr1 (933-1036)||(39596580-39596682)
chr1 (903-1010)||(44422708-44422815)
chr1 (903-957)||(5421898-5421952)
chr1 (934-1000)||(11695880-11695946)
chr1 (903-1005)||(19092338-19092439)
chr1 (903-961)||(27807173-27807231)
chr1 (911-961)||(38001654-38001704)
chr1 (972-1010)||(45667785-45667823)
chr1 (918-983)||(4481966-4482031)
chr1 (903-1012)||(4622100-4622209)
chr1 (870-943)||(5886911-5886982)
chr1 (903-944)||(8382416-8382457)
chr1 (987-1036)||(23445317-23445366)
chr1 (965-1018)||(26779941-26779994)
chr1 (948-1013)||(30257689-30257754)
chr1 (918-1072)||(33185927-33186082)
chr1 (980-1086)||(33527178-33527286)
chr1 (908-961)||(38170649-38170702)
chr1 (927-1012)||(39270403-39270488)
chr1 (903-956)||(42336678-42336731)
chr1 (903-1093)||(44031953-44032145)
chr1 (1038-1095)||(52286600-52286657)
[»] chr2 (63 HSPs)
chr2 (898-1080)||(39621890-39622072)
chr2 (903-1013)||(12313127-12313237)
chr2 (930-1036)||(33941892-33941998)
chr2 (903-1072)||(787276-787448)
chr2 (916-1009)||(33192212-33192304)
chr2 (903-1018)||(35485918-35486033)
chr2 (903-1034)||(40158703-40158834)
chr2 (903-1013)||(38078364-38078474)
chr2 (927-1012)||(35378994-35379079)
chr2 (927-1034)||(42419982-42420089)
chr2 (911-1036)||(1625883-1626009)
chr2 (919-1013)||(15120189-15120283)
chr2 (964-1079)||(43259772-43259889)
chr2 (948-1012)||(1939331-1939395)
chr2 (903-970)||(5902503-5902570)
chr2 (982-1086)||(10143103-10143209)
chr2 (869-998)||(43529776-43529907)
chr2 (903-961)||(1801726-1801784)
chr2 (903-961)||(4350748-4350806)
chr2 (972-1018)||(9477953-9477999)
chr2 (948-1010)||(34652035-34652097)
chr2 (972-1018)||(36863648-36863694)
chr2 (903-1094)||(11513824-11514012)
chr2 (918-987)||(13220465-13220534)
chr2 (903-1012)||(16867746-16867854)
chr2 (916-1009)||(32106766-32106859)
chr2 (922-1011)||(33256748-33256837)
chr2 (920-997)||(38809348-38809425)
chr2 (977-1018)||(39983343-39983384)
chr2 (964-1077)||(4090289-4090404)
chr2 (972-1012)||(10884544-10884584)
chr2 (911-1018)||(20952356-20952464)
chr2 (977-1013)||(24097814-24097850)
chr2 (869-994)||(28677577-28677704)
chr2 (919-1088)||(28933753-28933923)
chr2 (927-987)||(31096333-31096393)
chr2 (918-1010)||(41817177-41817269)
chr2 (936-1008)||(44438826-44438898)
chr2 (911-1009)||(750680-750779)
chr2 (918-1009)||(1494415-1494506)
chr2 (977-1012)||(3049981-3050016)
chr2 (979-1010)||(9530758-9530789)
chr2 (934-1005)||(25790140-25790211)
chr2 (901-944)||(32837398-32837441)
chr2 (977-1036)||(40279180-40279239)
chr2 (860-890)||(4508312-4508342)
chr2 (1036-1094)||(17952790-17952848)
chr2 (948-1018)||(33942151-33942221)
chr2 (964-1018)||(40279408-40279462)
chr2 (978-1079)||(43299430-43299535)
chr2 (927-1008)||(43570425-43570506)
chr2 (933-1010)||(680512-680589)
chr2 (903-956)||(1318299-1318352)
chr2 (928-1005)||(1647250-1647327)
chr2 (1036-1093)||(3102617-3102674)
chr2 (927-1012)||(9556246-9556331)
chr2 (1056-1093)||(26484193-26484230)
chr2 (997-1087)||(33931618-33931710)
chr2 (927-1012)||(35378510-35378595)
chr2 (940-1013)||(43173228-43173301)
chr2 (911-1072)||(43279488-43279652)
chr2 (1036-1093)||(43530200-43530257)
chr2 (977-1018)||(43985031-43985072)
[»] chr6 (36 HSPs)
chr6 (906-1072)||(33887775-33887943)
chr6 (911-1036)||(20368142-20368267)
chr6 (928-1012)||(31624097-31624181)
chr6 (977-1069)||(31776303-31776396)
chr6 (922-1094)||(9093528-9093704)
chr6 (977-1035)||(31812041-31812099)
chr6 (1037-1086)||(3171521-3171570)
chr6 (916-1013)||(8035115-8035212)
chr6 (907-1012)||(31686321-31686426)
chr6 (903-1012)||(32171337-32171446)
chr6 (911-1012)||(33089513-33089614)
chr6 (977-1086)||(4006645-4006756)
chr6 (982-1095)||(4248880-4248995)
chr6 (948-1012)||(6647394-6647458)
chr6 (965-1033)||(7945900-7945967)
chr6 (1041-1093)||(31668779-31668831)
chr6 (920-1013)||(103437-103530)
chr6 (903-1012)||(34403862-34403971)
chr6 (918-1010)||(2263201-2263293)
chr6 (916-1072)||(2735014-2735173)
chr6 (932-1012)||(28641732-28641812)
chr6 (901-1013)||(32386515-32386627)
chr6 (901-1012)||(769146-769256)
chr6 (1038-1089)||(32861356-32861407)
chr6 (928-986)||(1575928-1575986)
chr6 (946-1012)||(4246417-4246483)
chr6 (918-1012)||(4324423-4324516)
chr6 (948-1010)||(4420652-4420714)
chr6 (911-961)||(9202952-9203002)
chr6 (1035-1089)||(33259744-33259798)
chr6 (994-1099)||(33826780-33826884)
chr6 (1036-1093)||(3217279-3217336)
chr6 (982-1088)||(6654544-6654652)
chr6 (903-952)||(10353715-10353764)
chr6 (907-1012)||(33116591-33116696)
chr6 (903-992)||(35070421-35070510)
[»] chr5 (40 HSPs)
chr5 (982-1099)||(912681-912801)
chr5 (925-1072)||(17368621-17368770)
chr5 (922-1099)||(39105381-39105562)
chr5 (903-1012)||(17258837-17258946)
chr5 (979-1099)||(18543226-18543349)
chr5 (928-1078)||(18857377-18857531)
chr5 (909-1013)||(37611175-37611279)
chr5 (909-1013)||(37787905-37788009)
chr5 (925-1012)||(13604825-13604912)
chr5 (904-1018)||(2568659-2568773)
chr5 (932-1012)||(21768180-21768260)
chr5 (903-1018)||(12459955-12460070)
chr5 (1043-1101)||(11684339-11684397)
chr5 (903-961)||(25720371-25720429)
chr5 (903-1008)||(4619718-4619823)
chr5 (954-1086)||(4014429-4014563)
chr5 (909-1036)||(6587067-6587194)
chr5 (1036-1099)||(20982224-20982287)
chr5 (911-1018)||(37526161-37526268)
chr5 (911-1018)||(37588322-37588429)
chr5 (903-957)||(499685-499739)
chr5 (922-1012)||(11707062-11707152)
chr5 (965-1095)||(31694440-31694572)
chr5 (903-1012)||(33533494-33533602)
chr5 (906-1010)||(10125675-10125779)
chr5 (911-1018)||(29925842-29925950)
chr5 (912-1012)||(36638754-36638854)
chr5 (977-1049)||(10272459-10272533)
chr5 (1043-1094)||(10391276-10391327)
chr5 (977-1012)||(40731476-40731511)
chr5 (965-1099)||(12425488-12425625)
chr5 (948-1018)||(14674899-14674969)
chr5 (948-1018)||(15308992-15309062)
chr5 (1037-1099)||(19177397-19177459)
chr5 (982-1012)||(38047888-38047918)
chr5 (983-1013)||(40205108-40205138)
chr5 (1037-1094)||(1961915-1961972)
chr5 (920-1012)||(28777000-28777093)
chr5 (939-1012)||(41957441-41957514)
chr5 (980-1086)||(42646846-42646954)
[»] chr7 (41 HSPs)
chr7 (903-1085)||(28165023-28165207)
chr7 (932-1086)||(12110291-12110447)
chr7 (977-1094)||(47941243-47941365)
chr7 (982-1095)||(39169449-39169563)
chr7 (910-1009)||(27626084-27626183)
chr7 (911-1012)||(20526453-20526555)
chr7 (903-1013)||(25670540-25670650)
chr7 (977-1080)||(46945846-46945951)
chr7 (977-1137)||(48131231-48131390)
chr7 (948-1012)||(529382-529446)
chr7 (869-1013)||(28691754-28691899)
chr7 (971-1034)||(39542322-39542385)
chr7 (965-1036)||(44821942-44822013)
chr7 (898-1032)||(752956-753090)
chr7 (904-1005)||(3836638-3836738)
chr7 (965-1010)||(25596042-25596087)
chr7 (903-1004)||(33894642-33894743)
chr7 (903-988)||(44808189-44808274)
chr7 (909-1101)||(5628526-5628720)
chr7 (920-1012)||(7244687-7244779)
chr7 (927-1018)||(39967921-39968013)
chr7 (977-1013)||(48917374-48917410)
chr7 (977-1032)||(3968785-3968840)
chr7 (903-994)||(22387850-22387941)
chr7 (977-1012)||(27378856-27378891)
chr7 (1036-1095)||(35536029-35536088)
chr7 (1054-1093)||(45078217-45078256)
chr7 (983-1090)||(3610774-3610883)
chr7 (1037-1099)||(5373143-5373205)
chr7 (903-957)||(8094368-8094422)
chr7 (875-944)||(13960648-13960718)
chr7 (928-986)||(15740390-15740448)
chr7 (977-1072)||(17989051-17989148)
chr7 (1044-1094)||(22388001-22388051)
chr7 (903-961)||(36537966-36538024)
chr7 (988-1078)||(1417203-1417295)
chr7 (917-1010)||(22551373-22551466)
chr7 (977-1018)||(24363629-24363670)
chr7 (977-1010)||(30723067-30723100)
chr7 (1036-1093)||(45593808-45593865)
chr7 (977-1018)||(46104595-46104636)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1043-1095)||(143157-143209)
[»] scaffold0590 (1 HSPs)
scaffold0590 (1036-1092)||(1163-1219)
[»] scaffold0508 (1 HSPs)
scaffold0508 (1036-1096)||(9864-9924)
[»] scaffold0275 (1 HSPs)
scaffold0275 (1036-1092)||(2756-2812)
[»] scaffold0654 (1 HSPs)
scaffold0654 (1036-1094)||(6726-6784)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1036-1094)||(116645-116703)
[»] scaffold0608 (1 HSPs)
scaffold0608 (918-983)||(9606-9671)
[»] scaffold0003 (1 HSPs)
scaffold0003 (932-1013)||(306332-306413)


Alignment Details
Target: chr4 (Bit Score: 1387; Significance: 0; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 1387; E-Value: 0
Query Start/End: Original strand, 15 - 1551
Target Start/End: Original strand, 50741903 - 50743444
Alignment:
Q  15 catcatcatacacctaaacatttgtagactttggtttccataatcaagttggtttactccacagtgacttgagtttaannnnnnnatgttacaatatctt 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  50741903 catcctcatacacctaaacatttgtagactttggtttccataatcaagttggtttactccacagtgacttgagtttaagggggggatgttacaatatctt 50742002  T
Q  115 cagccttgatttgttacaaattcattgattctgattgattgtattaggaggataccatttatttgtaactaccatatcttgtatggctagaatcttctgt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742003 cagccttgatttgttacaaattcattgattctgattgattgtattaggaggataccatttatttgtaactaccatatcttgtatggctagaatcttctgt 50742102  T
Q  215 aaagtcttgacatacaaagaaatatacagaaatgcaatgcaatccttgacaacaatattagcttacaatgaaaacccgccgtccctttcacttcaaaatc 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||    
T  50742103 aaagtcttgacatacaaagaaatatacagaaatgcaatgcaatccttgacaacaatattagcttacaatgaaaacctgcc----ctttcacttcaaaatc 50742198  T
Q  315 caatgttgactgcaaatgacattnnnnnnnnnnnngcaagtgagagcttacgggtgtggaacattatgccaagcagttacattaggaatgtgttct---t 411  Q
    |||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  50742199 caatgttgactgcaaatgacattaaaaaacaaaaagcaagtgagagcttacgggtgtggaacattatgccaagcagttacattaggaatgtgttcttctt 50742298  T
Q  412 cttcttctccttcctgtccatctacttccatgtatttctcaaatcctctgatcatggcctccatagctaccttaagagacttcttgttacccttaagccc 511  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50742299 cttcttctccttcctgtccatctacttccatgtacttctcaaatcctctgatcatggcctccatagctaccttaagagactttttgttacccttaagccc 50742398  T
Q  512 tcgttgtgcagatgatacggcttgttgagacccaccatcagcagtggcagagcccatcaaagcatctactttctgctcagcaccggcaacactctcttgt 611  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742399 tcgttgtgcagatgatacggcttgttgagacccaccatcagcagtggcagagcccatcaaagcatctactttctgctcagcaccggcaacactctcttgt 50742498  T
Q  612 tcagcaaactgaatccaagcatcatcaagcctgtcttcaacatgtgccggtgctgtcgctagaccaaagaaaaacccattttcttcttctgcaaaagtaa 711  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742499 tcagcaaactgaatccaagcatcatcaagcctgtcttcaacatgcgccggtgctgtcgctagaccaaagaaaaacccattttcttcttctgcaaaagtaa 50742598  T
Q  712 ataaataagccatgtttatattggctcatttgaacttacatactcacataagcattagtgaaattgtgtaggagaacttatgaaaacaatgtatggacat 811  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  50742599 ataaataagccatgtttatattggctcatttgaacttacatactcacataagcatttgtgaaattgtgtaggagaacttatgacaacaatgtatggacat 50742698  T
Q  812 gttttcagctcatttccatgagctctggaagattgttaatatataaacacttacgacctgtttggattgacttatttgaggctattcttgtataagcact 911  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742699 gttttcagctcatttccatgagctctggaagattgttaatatataaacacttacgacctgtttggattgacttatttgaggctattcttgtataagcact 50742798  T
Q  912 tgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaac 1011  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50742799 tgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttcaactcattttcataagctctccaggatagcttatgaaaac 50742898  T
Q  1012 aagttatttattatacaaaaacaatgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcacttcttatgatgtaa 1111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742899 aagttatttattatacaaaaacaatgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcacttcttatgatgtaa 50742998  T
Q  1112 gttgcaaattaagttatttatcca------aagatgacattatatgataagcgtttatgctaatgaacacttaatttagttgtgtaactaaagagagcct 1205  Q
    ||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50742999 gttgcaaattaagttatttatccaaagatgaagatgacattatatgataagcgtttatgctaatgaacacttaatttagttgtgtaaataaagagagcct 50743098  T
Q  1206 taatctattttattgaccttatcagcatgcatgaatgcatgtttgcaaagaaataacataactgaagttaattgcaattcgcaaaccaattaatcaataa 1305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50743099 taatctattttattgaccttatcagcatgcatgaatgcatgtttgcaaagaaataacataactgaagttaattgcaattcgcaaaccaattaatcaataa 50743198  T
Q  1306 taatagagattattaccggtaatgttgaaatcggcgagagtatcggaggattcatcgatgggggaattgaaacggcgaagatttttgttgcgaaaacgag 1405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50743199 taatagagattattaccggtaatgttgaaatcggcgagagtatcggaggattcatcgatgggggaattgaaacggcgaagatttttgttgcgaaaacgag 50743298  T
Q  1406 agaaggagaaggcattggcggcgagggtgagagtgactaatgctccggcgagtttagtggcagttaggaagagtgaaactaccgtcatggtagtggcgag 1505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50743299 agaaggagaaggcattggcggcgagggtgagagtgactaatgctccggcgagtttagtggcagttaggaagagcgaaactaccgtcatggtagtggcgag 50743398  T
Q  1506 tgggtcttacgcgctctcaatcataatcataccgttaagttctgga 1551  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||    
T  50743399 tgggtcttacgcgctctctatcatactcataccgttaagttctgga 50743444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 903 - 1080
Target Start/End: Complemental strand, 2996689 - 2996510
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||| | ||||||||||||||| ||||||||||||  | ||||||||| ||||  || |||| |||| ||||||||| |||||||| |||||||    
T  2996689 ataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagct 2996590  T
Q  1003 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagc 1080  Q
    ||||||||||| ||||   ||||| ||||||||  |||||  ||||||| || ||||||  || |||||||| |||||||    
T  2996589 tatgaaaacaacttataacttatataaaaacaatttgactgtattttatcttatgttatcgaagtagcttattcataagc 2996510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 977 - 1092
Target Start/End: Original strand, 8422867 - 8422982
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaatgacttaattttatgttgtgttataaaaatagcttatccat 1076  Q
    |||| ||||| ||||||| ||||| || ||||||||| ||||   |||||  ||||||||||||| ||||||| || | ||||||||||||||||| |||    
T  8422867 atttgcataaactctccaagatagattgtgaaaacaacttatagcttatatgaaaacaatgactttattttatctttttttataaaaatagcttatacat 8422966  T
Q  1077 aagcgcttatatgata 1092  Q
    |||| | |||||||||    
T  8422967 aagcacatatatgata 8422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 908 - 1084
Target Start/End: Complemental strand, 1137823 - 1137645
Alignment:
Q  908 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatga 1007  Q
    ||||||| | |||||||  |||||||||||||||||  | ||||||||||||||   |||||| |  | |||| |||||||||||  |||||| ||||||    
T  1137823 cacttgtgacactgtttaggagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctctcttggatagtttatga 1137724  T
Q  1008 aaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatccataagcgctt 1084  Q
    || ||  ||||  ||||| |||||| |  ||||||| ||||||| | || ||||| |||||| |||| |||||||||||    
T  1137723 aagcagcttatagattattcaaaaataatatgactttattttatatggtattatagaaatagtttattcataagcgctt 1137645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 903 - 1034
Target Start/End: Original strand, 7693965 - 7694095
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||| | ||| |||||| || |||||||||||  |||| ||||||||||||||   |||||| | || |||| ||||| |||||||||||| ||    
T  7693965 ataagcacttctaagattgtttgtgaaaacttatgaaat-agttaatgacatgttcataagttgttttcagcttatttccataaactctccaggataact 7694063  T
Q  1003 tatgaaaacaagttatttattatacaaaaaca 1034  Q
    ||||||||||  ||||   |||||||||||||    
T  7694064 tatgaaaacagcttatagcttatacaaaaaca 7694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 917 - 1036
Target Start/End: Original strand, 28300267 - 28300386
Alignment:
Q  917 gactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagtt 1016  Q
    ||||| ||||||||| ||||||||||||   ||||||||||| ||   |||||| |||| ||||||||||||||| || |||||| |||||||| |  ||    
T  28300267 gactgattgagagaatttatgaaaacagcctatgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagttt 28300366  T
Q  1017 atttattatacaaaaacaat 1036  Q
    ||   |||||||||||||||    
T  28300367 atagcttatacaaaaacaat 28300386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 911 - 1036
Target Start/End: Original strand, 50681050 - 50681176
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgac-atgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||| ||||||||||||||||||||||||||||||| ||||| || ||||||  || |||| || | ||||||||||  ||||||  |||||||||  ||    
T  50681050 ttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagcttatataa 50681149  T
Q  1010 acaagttatttattatacaaaaacaat 1036  Q
    |||| ||||    ||||||||||||||    
T  50681150 acaacttatagcatatacaaaaacaat 50681176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 977 - 1071
Target Start/End: Complemental strand, 17884110 - 17884014
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagctta 1071  Q
    ||||||||||||||||||  ||||||||||||||||| | ||   ||||||||||||||  | |||| ||||||| || ||||||| ||||||||||    
T  17884110 attttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatcttttgttatagaaatagctta 17884014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 948 - 1085
Target Start/End: Original strand, 6466045 - 6466184
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaatt 1045  Q
    |||| |||||||||  || |||| |||| |||| ||||| ||||| || |||||||||| |||||| ||||  |||||||||||| ||  | |||| |||    
T  6466045 atgagatgttcataagctattttcaacttatttccataatctctctagaatagcttatggaaacaacttatagattatacaaaaagaatttcactttatt 6466144  T
Q  1046 ttatgttgtgttataaaaatagcttatccataagcgctta 1085  Q
    | || |||||||||| ||| | ||||| ||||||||||||    
T  6466145 tgatcttgtgttatataaacaacttattcataagcgctta 6466184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 930 - 1071
Target Start/End: Original strand, 20936210 - 20936353
Alignment:
Q  930 aacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaa 1029  Q
    ||||||||||||||  | |||| |||||||||  ||||||| | || |||| ||||| |||||||||||||  |||||||||||  |||  |||||| ||    
T  20936210 aacttatgaaaacaacttatgatatgttcataagctgttttcaccttatttccataatctctccaggatagaatatgaaaacaacctatagattatataa 20936309  T
Q  1030 aaacaa--tgacttaattttatgttgtgttataaaaatagctta 1071  Q
    ||||||  |||||| ||||||  ||| |||||| | ||||||||    
T  20936310 aaacaatttgacttcattttaccttgcgttatagatatagctta 20936353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 983 - 1094
Target Start/End: Complemental strand, 3891611 - 3891500
Alignment:
Q  983 ataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataagc 1080  Q
    |||||||||| |||||||||||| ||||||| |||  ||||||||||||||  |  ||||| ||||||  |  ||||||| |||||| |||| |||||||    
T  3891611 ataagctctctaggatagcttataaaaacaacttacatattatacaaaaacggttcgactttatttta--tcctgttatagaaatagtttattcataagc 3891514  T
Q  1081 gcttatatgataag 1094  Q
     |||||||||||||    
T  3891513 acttatatgataag 3891500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 908 - 1005
Target Start/End: Original strand, 17751106 - 17751200
Alignment:
Q  908 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    ||||||| ||||||||||  ||||||  ||||||||| | | ||||||||||||   |||||||| || ||||||||||||||| || ||||||||||    
T  17751106 cacttgtgagactgtttggaagaactcttgaaaacagcttacgacatgttcata---tgttttaagcttattttcataagctctgcaagatagcttat 17751200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 909 - 1012
Target Start/End: Original strand, 21043195 - 21043298
Alignment:
Q  909 acttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 1008  Q
    |||||| |||||||||| ||||  ||||| |||||| | |||||| |||||||  ||||||| |    ||||||||| ||||| ||||||||||||||||    
T  21043195 acttgtgagactgtttgggagaggttatggaaacagcttatgacacgttcataagctgttttcagtgtattttcatatgctcttcaggatagcttatgaa 21043294  T
Q  1009 aaca 1012  Q
    ||||    
T  21043295 aaca 21043298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 903 - 946
Target Start/End: Complemental strand, 22471390 - 22471347
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagtt 946  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  22471390 ataagcacttgtgagactgtttgggagaacttatgaaaacagtt 22471347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 911 - 1012
Target Start/End: Complemental strand, 1706731 - 1706629
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||| |||| ||||||||||| |||||||||||| | ||| ||| |||||||  || |||  |||| ||||||||||||| |||| ||||| ||||||||    
T  1706731 ttgtgagacggtttgagagaaattatgaaaacagcttatggcattgttcataagctatttccaacttattttcataagctgtccaagatagtttatgaaa 1706632  T
Q  1010 aca 1012  Q
    |||    
T  1706631 aca 1706629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 902 - 944
Target Start/End: Complemental strand, 4071995 - 4071953
Alignment:
Q  902 tataagcacttgttagactgtttgagagaacttatgaaaacag 944  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  4071995 tataagcacttgtgagactgtttgagagagcttatgaaaacag 4071953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 965 - 1072
Target Start/End: Complemental strand, 10192337 - 10192229
Alignment:
Q  965 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaa 1062  Q
    |||||| |||| ||||||||| ||||||||||||||||| ||||||||| ||||   |||||  |||||||  |||||| ||| ||| || |||||||||    
T  10192337 tgttttcaacttattttcata-gctctccaggatagcttttgaaaacaacttataacttatatgaaaacaatttgactttattctatcttttgttataaa 10192239  T
Q  1063 aatagcttat 1072  Q
    ||||| ||||    
T  10192238 aatagtttat 10192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 948 - 1018
Target Start/End: Complemental strand, 11264372 - 11264302
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    ||||||||| ||||  ||||||| |||| |||| ||||||||||| ||||| |||||||||||||| ||||    
T  11264372 atgacatgtccataaactgttttcaacttatttccataagctctctaggatggcttatgaaaacaacttat 11264302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 956
Target Start/End: Original strand, 3549509 - 3549562
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 956  Q
    |||||||||| | |||||||||||||||||||||||||| |||  |||||||||    
T  3549509 ataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 3549562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 908 - 1013
Target Start/End: Original strand, 4798525 - 4798630
Alignment:
Q  908 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatga 1007  Q
    ||||||| |||||||| |  ||| |||||| |||| | |  |||||||| ||||  ||||||| | || |||| ||||||||||||| ||||||||||||    
T  4798525 cacttgtgagactgttaggaagagcttatggaaacggcttctgacatgtacataagctgttttgagcttatttgcataagctctccaagatagcttatga 4798624  T
Q  1008 aaacaa 1013  Q
    ||||||    
T  4798625 aaacaa 4798630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 1101
Target Start/End: Complemental strand, 21157884 - 21157684
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| ||||||||||  ||| ||||   |||||| | ||||||| | || |  ||||||| | || |||| |||||||||| |||||||||     
T  21157884 ataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacatttacaaaagctgtttttagcttatttccataagctcttcaggatagca 21157785  T
Q  1003 tatgaaaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcacttc 1100  Q
    ||||||||||  ||||   ||| |  ||||||   |||||| | |||||  | |||||| ||||||||| || ||||||| |||||||||||| ||||||    
T  21157784 tatgaaaacatcttatagcttacatgaaaacagtttgactttagtttatactttgttatcaaaatagctgatacataagcacttatatgataaacacttc 21157685  T
Q  1101 t 1101  Q
    |    
T  21157684 t 21157684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1036 - 1093
Target Start/End: Original strand, 51555956 - 51556013
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    |||||| ||||||| || |||||||| |||||||||| ||||||| ||||||||||||    
T  51555956 tgactttattttatcttttgttataataatagcttatacataagcacttatatgataa 51556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 927 - 1018
Target Start/End: Original strand, 17822842 - 17822934
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgtt-cataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||||| ||||||||||| | ||||||| || ||||  || |||| | || ||||||||||| |||||| |||||||||||||||||| ||||    
T  17822842 gagaacatatgaaaacagcttatgacatttttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttat 17822934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 982 - 1013
Target Start/End: Complemental strand, 7730661 - 7730630
Alignment:
Q  982 cataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||||||||||||||||||||||||||||||    
T  7730661 cataagctctccaggatagcttatgaaaacaa 7730630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 982 - 1013
Target Start/End: Original strand, 11262796 - 11262827
Alignment:
Q  982 cataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||||||||||||||||||||||||||||||    
T  11262796 cataagctctccaggatagcttatgaaaacaa 11262827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 903 - 1005
Target Start/End: Original strand, 36577496 - 36577599
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctg-ttttaaactcattttcataagctctccaggatagc 1001  Q
    |||||||||||| |||||||||  |||||||||  ||||||  | |||||||||||| |  ||| |||| || ||||||||||||| |||||  ||||||    
T  36577496 ataagcacttgtgagactgtttcggagaacttacaaaaacaacttatgacatgttcaaatgctgtttttcaattcattttcataagttctcccagatagc 36577595  T
Q  1002 ttat 1005  Q
    ||||    
T  36577596 ttat 36577599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 977 - 1012
Target Start/End: Original strand, 39063675 - 39063710
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||||||||||||||||||| ||||||    
T  39063675 attttcataagctctccaggatagcttataaaaaca 39063710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 977 - 1016
Target Start/End: Original strand, 51044508 - 51044547
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagtt 1016  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  51044508 attttcataagttctctaggatagcttatgaaaacaagtt 51044547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 911 - 1089
Target Start/End: Complemental strand, 1966048 - 1965868
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||| ||||||||| || || ||||||||||||  | ||||||||||||||  ||||||| |||| |||| || ||| | || |||||||||||| ||||    
T  1966048 ttgtgagactgttttag-gagcttatgaaaacaacttatgacatgttcataagctgtttttaacttatttccagaagatttctaggatagcttataaaaa 1965950  T
Q  1011 caagttatttattatacaaaaacaa--tga-cttaattttatgttgtgttataaaaatagcttatccataagcgcttatatg 1089  Q
     || ||||  |||||||| | ||||  |||  ||| |||| | ||||| |||| |||||| |||| ||||||| ||||||||    
T  1965949 taacttataaattatacacagacaatttgagtttatttttctcttgtgctatagaaatagtttattcataagcacttatatg 1965868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 911 - 1001
Target Start/End: Original strand, 6987703 - 6987793
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagc 1001  Q
    |||| |||||||||| |||| |||||| | |||  | ||||||||| ||||  || |||| |||| |||| ||||||||||||||||||||    
T  6987703 ttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctctccaggatagc 6987793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 911 - 1012
Target Start/End: Complemental strand, 24169372 - 24169270
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgtt-cataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||| ||||| ||||||||||||| | |||| || | ||||||| || ||||   | |||| |||| |||||||||||||||||| |||||||| |||||    
T  24169372 ttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagattttttcaacttattttcataagctctccaagatagcttgtgaaa 24169273  T
Q  1010 aca 1012  Q
    |||    
T  24169272 aca 24169270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 909 - 943
Target Start/End: Original strand, 32278369 - 32278403
Alignment:
Q  909 acttgttagactgtttgagagaacttatgaaaaca 943  Q
    ||||||||||||||||||||| |||||||||||||    
T  32278369 acttgttagactgtttgagagtacttatgaaaaca 32278403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1054 - 1092
Target Start/End: Original strand, 32920505 - 32920543
Alignment:
Q  1054 tgttataaaaatagcttatccataagcgcttatatgata 1092  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  32920505 tgttataaaaatagcttatccataaacacttatatgata 32920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1090
Target Start/End: Complemental strand, 47970299 - 47970245
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatga 1090  Q
    |||||| ||||||| || ||||||| ||||||||||| ||||||| |||||||||    
T  47970299 tgacttcattttatcttttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 908 - 986
Target Start/End: Original strand, 48719350 - 48719428
Alignment:
Q  908 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataa 986  Q
    ||||||| ||| |||||||| |||||||||||||  ||| ||||||||||| ||  ||||||| | || ||||||||||    
T  48719350 cacttgtgagattgtttgagggaacttatgaaaatggtttatgacatgttcgtaagctgttttcagcttattttcataa 48719428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 1036
Target Start/End: Original strand, 52746793 - 52746927
Alignment:
Q  903 ataagcacttgttagactgtttgagagaact-tatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagc 1001  Q
    |||||||||||| |||||  |||| | |||| |||| |||||| | | ||||||||||||  ||||||| | || ||||||||||||  | || ||||||    
T  52746793 ataagcacttgtgagactagttgataaaactatatggaaacagcttaagacatgttcataagctgttttcagctgattttcataagccttacaagatagc 52746892  T
Q  1002 ttatgaaaacaagttatttattatacaaaaacaat 1036  Q
    |||||||||||  ||||   ||| |||||||||||    
T  52746893 ttatgaaaacagcttatggcttacacaaaaacaat 52746927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 870 - 1070
Target Start/End: Complemental strand, 679865 - 679663
Alignment:
Q  870 tgtttggattgacttatttgaggctattcttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttt 969  Q
    |||||||||||||| |||||||  ||| || |||||||||||||  |||||  |||  |||| |||||||||||  | |||| |||||||||  ||||||    
T  679865 tgtttggattgactaatttgagcttat-ctggtataagcacttgg-agactacttggtagaagttatgaaaacatcttatgatatgttcataaactgttt 679768  T
Q  970 taaactcattttcataagctc-tccaggatagcttatgaaaacaagttatttattatac-aaaaacaa--tgacttaattttatgttgtgttataaaaat 1065  Q
    | | |  |||||||||||||| | || |||| |||||||  |||| |||| | |||||| ||||||||  | |||||||||||| || | ||||| ||||    
T  679767 tcagcatattttcataagctcttacaagatatcttatgactacaacttatatcttatacaaaaaacaatttaacttaattttatattttattatagaaat 679668  T
Q  1066 agctt 1070  Q
    |||||    
T  679667 agctt 679663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 916 - 961
Target Start/End: Original strand, 1554975 - 1555020
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    |||||||||||||||| ||||||||| || | ||||||||||||||    
T  1554975 agactgtttgagagaatttatgaaaatagcttatgacatgttcata 1555020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1054 - 1099
Target Start/End: Original strand, 2980578 - 2980623
Alignment:
Q  1054 tgttataaaaatagcttatccataagcgcttatatgataagcactt 1099  Q
    ||||||| ||||||||||| ||||||| |||||||||||| |||||    
T  2980578 tgttatagaaatagcttatacataagcacttatatgataaacactt 2980623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1044 - 1093
Target Start/End: Complemental strand, 4191712 - 4191663
Alignment:
Q  1044 ttttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    |||||| || ||||||| ||||||||||| ||||||| ||||||||||||    
T  4191712 ttttatcttttgttatagaaatagcttatacataagcacttatatgataa 4191663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 948 - 1005
Target Start/End: Complemental strand, 19422469 - 19422412
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    ||||||||| ||||| || |||| |||| |||| ||||||||||||||||||| ||||    
T  19422469 atgacatgtgcatacgcttttttcaacttatttccataagctctccaggatagtttat 19422412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1054 - 1099
Target Start/End: Complemental strand, 46796981 - 46796936
Alignment:
Q  1054 tgttataaaaatagcttatccataagcgcttatatgataagcactt 1099  Q
    |||||| |||||||||||| ||||||  ||||||||||||||||||    
T  46796981 tgttatgaaaatagcttatgcataagaacttatatgataagcactt 46796936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 911 - 944
Target Start/End: Original strand, 49940128 - 49940161
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacag 944  Q
    |||| |||||||||||||||||||||||||||||    
T  49940128 ttgtgagactgtttgagagaacttatgaaaacag 49940161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-23; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 903 - 1087
Target Start/End: Complemental strand, 44295643 - 44295462
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| | ||| |||||||||||||||||||||  |||||||||  || |||  ||||||| | || |||| ||||||||||||   ||| ||    
T  44295643 ataagcacttgtgatactatttgagagaacttatgaaaactattcatgaca--tttatattctgttttcagcttatttccataagctctccgatatatct 44295546  T
Q  1003 tatgaaaacaagttatttattatacaaaaacaatgacttaattttatgttgtgttataaaaatagcttatccataagcgcttata 1087  Q
    ||||||||||| ||||  |||||| ||||| ||||| || ||||||| ||| |||||| ||||||||||| || |||||||||||    
T  44295545 tatgaaaacaacttatagattata-aaaaaaaatgattttattttatcttgagttatagaaatagcttattcacaagcgcttata 44295462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 917 - 1036
Target Start/End: Complemental strand, 21367770 - 21367650
Alignment:
Q  917 gactgtttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagt 1015  Q
    ||||||||| |||||||||||||||||| | ||||||| ||||| |  ||||||| | || ||||||||||| |||||| |||||||||||||||||| |    
T  21367770 gactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaact 21367671  T
Q  1016 tatttattatacaaaaacaat 1036  Q
    |||  ||||||| ||||||||    
T  21367670 tatacattatacgaaaacaat 21367650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 927 - 1093
Target Start/End: Complemental strand, 1816675 - 1816506
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattata 1026  Q
    |||||| |||||||| |  | ||||||| ||||||  ||||||| | || ||||| ||||||||||||| ||||||||||||||||| |||| | |||||    
T  1816675 gagaacatatgaaaataacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttata 1816576  T
Q  1027 caaaaaca--atgacttaattttatgttgtgttat-aaaaatagcttatccataagcgcttatatgataa 1093  Q
    ||||||||   |||||| ||||||| || | |||| |||||||| |||| ||| ||| ||||||||||||    
T  1816575 caaaaacagtttgactttattttatcttttattataaaaaatagtttatacattagctcttatatgataa 1816506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 903 - 1137
Target Start/End: Original strand, 30573868 - 30574100
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| ||  |||||| |||||||||||||||||  | ||| ||||||||||  ||||||| | || || ||||| ||||||||| |||||||    
T  30573868 ataagcacttgtgagtttgtttgtgagaacttatgaaaacaaattatggcatgttcataagctgttttcagcttatgttcatcagctctccaagatagct 30573967  T
Q  1003 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttat-atgataagcactt 1099  Q
    ||||||||||   |||  |||||| ||||| ||  | |||| ||||||| |  | ||||| ||||||||||| ||||||||||||| ||||||   | |     
T  30573968 tatgaaaacatcatatagattataaaaaaaaaacttaactttattttatct--ttttatagaaatagcttatacataagcgcttatcatgata---aatg 30574062  T
Q  1100 cttatgatgtaagttgcaaattaagttatttatccaaa 1137  Q
    |||||||| |||| ||||||||| | | ||||||||||    
T  30574063 cttatgatataagctgcaaattatggtgtttatccaaa 30574100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 868 - 1010
Target Start/End: Complemental strand, 45541724 - 45541580
Alignment:
Q  868 cctgtttggattgacttatttgaggctattc--ttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccct 965  Q
    ||||||||||||||||||||||||  ||||   | |||||| ||||||| |||||||||   ||||||||||||||||| | ||||||||||||||  ||    
T  45541724 cctgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcataagct 45541625  T
Q  966 gttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    ||||| |  | ||| ||||||| | |||| |||||||||||||||    
T  45541624 gttttcaggttattctcataagttatccaagatagcttatgaaaa 45541580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 948 - 1077
Target Start/End: Complemental strand, 24785276 - 24785145
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaac--aatgacttaatt 1045  Q
    ||||||||||||||   |||||| | || |||| ||||||||||| ||||||||||||||||||| |||||  |||||||||||||  | |||||| |||    
T  24785276 atgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaacagattgactttatt 24785177  T
Q  1046 ttatgttgtgttataaaaatagcttatccata 1077  Q
    |||| ||||| | || |||||| |||| ||||    
T  24785176 ttatcttgtgatttagaaataggttattcata 24785145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 907 - 1018
Target Start/End: Original strand, 14548679 - 14548790
Alignment:
Q  907 gcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatg 1006  Q
    |||||||| ||||||||||||||| ||||||||||||    ||||||| || |||  ||||||| | || |||| |||||||||||||| ||| ||||||    
T  14548679 gcacttgtgagactgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataacttatg 14548778  T
Q  1007 aaaacaagttat 1018  Q
    ||||||| ||||    
T  14548779 aaaacaacttat 14548790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 903 - 1085
Target Start/End: Original strand, 20192560 - 20192744
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||| ||| ||||| ||||||| |||||  |||||| | ||||||||| ||||  ||||||| ||||||||| |||||||||||| | |||  |    
T  20192560 ataagcacttcttacactgtatgagagagcttatagaaacagcttatgacatgtccataagctgttttcaactcatttccataagctctcccgaataagt 20192659  T
Q  1003 tatgaaaacaagttatttattatacaaaaac--aatgacttaattttatgttgtgttataaaaatagcttatccataagcgctta 1085  Q
    ||  ||||||  ||||  ||||||  |||||    |||||| ||||||| || ||||||| ||||||||||| ||||||| ||||    
T  20192660 tacaaaaacagcttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 903 - 1012
Target Start/End: Complemental strand, 37273250 - 37273141
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    ||||||||| || |||||||||| |||| |||||| |||||  | ||||||||| ||||   |||||| |||| |||| |||||| |||||| |||||||    
T  37273250 ataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagct 37273151  T
Q  1003 tatgaaaaca 1012  Q
    ||||||||||    
T  37273150 tatgaaaaca 37273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 903 - 1081
Target Start/End: Original strand, 49465619 - 49465797
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| | | |||||  |||||||||||||||||| | || ||||||||||    | |||||| || |||| |||||| ||||||| ||||||    
T  49465619 ataagcacttgtgatattgtttcggagaacttatgaaaacagcttattacatgttcattaggttttttaagcttatttccataagttctccagtatagct 49465718  T
Q  1003 tatgaaaacaagttattta-ttatac-aaaaacaatgacttaattttatgttgtgttataaaaatagcttatccataagcg 1081  Q
    |||||||||||   |||||  ||||| ||||| | | |||| ||||||| || ||||||||||||||||||  ||||||||    
T  49465719 tatgaaaacaa--catttagctatacgaaaaaaattaactttattttatcttttgttataaaaatagcttacacataagcg 49465797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 916 - 1005
Target Start/End: Complemental strand, 50952436 - 50952347
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    |||||||| |||||||| || |||||||| | ||||||||||||||  ||||||||| || |||| ||||||||||||| ||||| ||||    
T  50952436 agactgttcgagagaacgtacgaaaacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttat 50952347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 916 - 1037
Target Start/End: Original strand, 54837001 - 54837122
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagt 1015  Q
    ||||||||||  |||| |||||||||||| | |||||||||||||| | ||||||   || ||||| ||||||| |||| ||||||||||||||| || |    
T  54837001 agactgtttggaagaatttatgaaaacagcttatgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataact 54837100  T
Q  1016 tatttattatacaaaaacaatg 1037  Q
    ||    ||||||||||||||||    
T  54837101 tacagtttatacaaaaacaatg 54837122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 911 - 1018
Target Start/End: Original strand, 18405792 - 18405900
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||| ||||||||||  ||||||||||||||||||||| |||| | ||||||  || ||| || || | ||||||||| |||||| ||||||||||||||    
T  18405792 ttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatctttttcaagcttaatttcataagttctccaagatagcttatgaaa 18405891  T
Q  1010 acaagttat 1018  Q
    |||| ||||    
T  18405892 acaacttat 18405900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 948 - 1018
Target Start/End: Original strand, 3044258 - 3044328
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    ||||||||||||||  ||||||| |||| |||||||||||||||||||| |||| || ||||||| |||||    
T  3044258 atgacatgttcataagctgttttcaacttattttcataagctctccaggttagcataagaaaacaggttat 3044328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 871 - 1002
Target Start/End: Complemental strand, 24281197 - 24281064
Alignment:
Q  871 gtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgtt 968  Q
    |||| |||||||||||||||| ||||   || ||||||||||||||  || ||||||||||| ||||||||||||  | |||| || | ||||   ||||    
T  24281197 gtttagattgacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccataagttgtt 24281098  T
Q  969 ttaaactcattttcataagctctccaggatagct 1002  Q
    || |||| | |||||||||||||||| |||||||    
T  24281097 ttcaacttactttcataagctctccatgatagct 24281064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 932 - 1012
Target Start/End: Original strand, 39602193 - 39602273
Alignment:
Q  932 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||| |||| | ||||||||||||||   |||||| |||| ||||||||||| |||| | |||||||||||||||||    
T  39602193 cttatgaagacagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaaca 39602273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 911 - 1018
Target Start/End: Complemental strand, 39980838 - 39980730
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatg-ttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||| ||||||||| ||||||||||||||||||| | |||||  | ||||||  || |||| |||| ||||||||||| ||||||  ||||||||| |||    
T  39980838 ttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagcttttttcaacttattttcataagttctccaatatagcttataaaa 39980739  T
Q  1010 acaagttat 1018  Q
    |||| ||||    
T  39980738 acaacttat 39980730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 868 - 961
Target Start/End: Original strand, 44014715 - 44014810
Alignment:
Q  868 cctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    ||||||||||||| ||||||||||  |||   || | |||| ||||||| ||||||||||||| ||||||||||||||| | ||||| ||||||||    
T  44014715 cctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgacctgttcata 44014810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 903 - 943
Target Start/End: Complemental strand, 50211851 - 50211811
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaaca 943  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  50211851 ataagcacttgtaagactgtttgagagaacttatgaaaaca 50211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 896 - 959
Target Start/End: Original strand, 20194980 - 20195043
Alignment:
Q  896 ttcttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttca 959  Q
    |||||| ||||||| |||| |||||||||| |||| ||||||||||||||| ||||||| ||||    
T  20194980 ttcttgcataagcagttgtgagactgtttgtgagagcttatgaaaacagtttatgacatattca 20195043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 977 - 1032
Target Start/End: Complemental strand, 22203472 - 22203417
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaa 1032  Q
    ||||||||||| |||||| |||||||||||||||||| ||||  ||||||||||||    
T  22203472 attttcataagttctccaagatagcttatgaaaacaacttatagattatacaaaaa 22203417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 910 - 1009
Target Start/End: Original strand, 27896131 - 27896230
Alignment:
Q  910 cttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| |||||||   |||  | | || ||||||| || ||||||| ||||||||||||||    
T  27896131 cttgttagactgtttaggagaatttatgaaaacagctcatgacaagttcataaattgtcgtcagcttattttcaaaaactctccaagatagcttatgaaa 27896230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 899 - 1009
Target Start/End: Original strand, 2152128 - 2152238
Alignment:
Q  899 ttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggat 998  Q
    |||||||||||||||| |||||  |||||| |  |||||||||||  | ||||||||||| ||  ||||||| ||||  |||  |||||||||| |||||    
T  2152128 ttgtataagcacttgtgagactaattgagatattttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggat 2152227  T
Q  999 agcttatgaaa 1009  Q
    || ||||||||    
T  2152228 agtttatgaaa 2152238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 916 - 1010
Target Start/End: Complemental strand, 21574593 - 21574499
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||||||||| |||| ||||||||||||  | ||||||||||||||  ||| ||| | || |||| ||||||||||||| | |||||||| ||||    
T  21574593 agactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaa 21574499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 906 - 1012
Target Start/End: Complemental strand, 24624323 - 24624217
Alignment:
Q  906 agcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    ||||||||| ||||||||||  ||| ||||||||||||| | ||||||||| ||||  ||||||| | || |||  |||||| | || |||||||| |||    
T  24624323 agcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttcagcttattaacataagatttctaggatagcctat 24624224  T
Q  1006 gaaaaca 1012  Q
    |||||||    
T  24624223 gaaaaca 24624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 916 - 1018
Target Start/End: Original strand, 40880915 - 40881017
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagt 1015  Q
    ||||||||||||||| ||||||||||||  | ||||||||  | ||   ||||||||||| ||||| ||||  |||| ||||||| |||||||||||| |    
T  40880915 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 40881014  T
Q  1016 tat 1018  Q
    |||    
T  40881015 tat 40881017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 908 - 1002
Target Start/End: Complemental strand, 47513764 - 47513670
Alignment:
Q  908 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    ||||||| |||||||| | ||| |||||||||||||  | |||||| |||||||   |||||| || | |||||||||||||||||| |||||||    
T  47513764 cacttgtgagactgttcgggaggacttatgaaaacaagttatgacacgttcataagttgttttcaatttattttcataagctctccaagatagct 47513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 930 - 987
Target Start/End: Complemental strand, 5391968 - 5391911
Alignment:
Q  930 aacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataag 987  Q
    ||||||||||||||| | ||||||||||||||  ||||||| |||| |||||||||||    
T  5391968 aacttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataag 5391911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 948 - 997
Target Start/End: Complemental strand, 25925813 - 25925764
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccagga 997  Q
    ||||||||||||||  ||||||| |||| |||||||||||||||||||||    
T  25925813 atgacatgttcataagctgttttcaacttattttcataagctctccagga 25925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1036 - 1092
Target Start/End: Original strand, 905059 - 905115
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgata 1092  Q
    |||||| ||||||| || ||||||| ||||||||||| | |||||||||||||||||    
T  905059 tgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatgata 905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 920 - 1012
Target Start/End: Original strand, 20467157 - 20467249
Alignment:
Q  920 tgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||| || ||| |||||||| ||||||||||||||  |||||||   || ||||| | |||||| | |||||| ||||||||||||    
T  20467157 tgtttgagagagctaatggaaacagtttatgacatgttcatatgctgttttcggctaattttgacaagctcgctaggatatcttatgaaaaca 20467249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 948 - 1012
Target Start/End: Complemental strand, 20669243 - 20669179
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||||  |||||||   || |||| ||||||||||||| |||||||||||||||||    
T  20669243 atgacatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaaca 20669179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 972 - 1012
Target Start/End: Original strand, 24158526 - 24158566
Alignment:
Q  972 aactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  24158526 aacttatttccataagctctccaggatagcttatgaaaaca 24158566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1043 - 1099
Target Start/End: Complemental strand, 25964416 - 25964360
Alignment:
Q  1043 attttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcactt 1099  Q
    ||||||| || ||||||||||||||||||| || |||  ||||||||||||||||||    
T  25964416 attttatcttttgttataaaaatagcttatacaaaagaacttatatgataagcactt 25964360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 907 - 1072
Target Start/End: Original strand, 36646340 - 36646507
Alignment:
Q  907 gcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatg 1006  Q
    |||||||| ||||| |||| |||| |||||| ||||   | ||| ||||| ||||  ||||||| | || ||||  |||| ||||| |||||||||||||    
T  36646340 gcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatg 36646439  T
Q  1007 aaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttat 1072  Q
    ||||||||||||   |||||  ||||||||   |||| ||||||| || ||| ||| |||||||||||    
T  36646440 aaaacaagttataacttatatgaaaacaattatactttattttatcttttgtcatagaaatagcttat 36646507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 948 - 1012
Target Start/End: Complemental strand, 40665500 - 40665436
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||||  ||||||| | || ||||| |||||||||||| |||| ||||||||||||    
T  40665500 atgacatgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaaca 40665436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1036 - 1096
Target Start/End: Original strand, 41028940 - 41029000
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagca 1096  Q
    |||||| ||||| | || ||||||| ||||||||||| ||||||| |||||||||||||||    
T  41028940 tgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataagca 41029000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 967 - 1010
Target Start/End: Complemental strand, 2825199 - 2825156
Alignment:
Q  967 ttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||||| || |||||||||||||||||| |||||||||||||||    
T  2825199 ttttaagcttattttcataagctctccaagatagcttatgaaaa 2825156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1054 - 1093
Target Start/End: Original strand, 16790463 - 16790502
Alignment:
Q  1054 tgttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  16790463 tgttataaaaatagcttatacataagcacttatatgataa 16790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1036 - 1091
Target Start/End: Complemental strand, 34958309 - 34958254
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgat 1091  Q
    |||||| ||||||| |||||||||| |||||| |||| |||||| |||||||||||    
T  34958309 tgactttattttatcttgtgttatagaaatagtttattcataagtgcttatatgat 34958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 903 - 954
Target Start/End: Complemental strand, 50760707 - 50760656
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacat 954  Q
    |||||||||||| | || | |||||||||||||||||||| |||||||||||    
T  50760707 ataagcacttgtgacaccgcttgagagaacttatgaaaactgttcatgacat 50760656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 982 - 1012
Target Start/End: Original strand, 24887316 - 24887346
Alignment:
Q  982 cataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||||||||||||||||||||||    
T  24887316 cataagctctccaggatagcttatgaaaaca 24887346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 869 - 943
Target Start/End: Original strand, 25182908 - 25182981
Alignment:
Q  869 ctgtttggattgacttatttgaggctattcttgtataagcacttgttagactgtttgagagaacttatgaaaaca 943  Q
    ||||||||| |||||||||||||  ||  ||  |||||| |||||| ||||||||||||||| ||||||||||||    
T  25182908 ctgtttggagtgacttatttgagcttac-ctactataagaacttgtgagactgtttgagagagcttatgaaaaca 25182981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 961
Target Start/End: Complemental strand, 25258888 - 25258830
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    ||||| |||||| ||||| |||||| ||||||||||||| |||| ||||||||| ||||    
T  25258888 ataagtacttgtgagactttttgagtgaacttatgaaaagagtttatgacatgtgcata 25258830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 918 - 992
Target Start/End: Original strand, 33880526 - 33880599
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctc 992  Q
    |||||||| |||||||||||||||||| |||||| |||| ||||  ||||||||| || |||| | |||||||||    
T  33880526 actgtttgggagaacttatgaaaacagatcatga-atgtccataagctgttttaatcttatttgcctaagctctc 33880599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 869 - 944
Target Start/End: Original strand, 47903998 - 47904075
Alignment:
Q  869 ctgtttggattgacttatttgaggctat--tcttgtataagcacttgttagactgtttgagagaacttatgaaaacag 944  Q
    |||||||||||||||||||||||  |||  |||  ||||||| | ||| | |||||||| ||||||||||||||||||    
T  47903998 ctgtttggattgacttatttgagtttatcctctgatataagctcctgtgacactgtttgggagaacttatgaaaacag 47904075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 941
Target Start/End: Complemental strand, 50016002 - 50015964
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaa 941  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  50016002 ataaacacttgtgagactgtttgagagaacttatgaaaa 50015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 918 - 992
Target Start/End: Complemental strand, 53952149 - 53952075
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctc 992  Q
    ||||||| ||||||||||||||||||| | || ||||||||||   ||||||| | || |||||||||| |||||    
T  53952149 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 53952075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 903 - 956
Target Start/End: Original strand, 2413633 - 2413686
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 956  Q
    |||| ||||||| || |||||||||||| ||||||||||| | |||||||||||    
T  2413633 ataatcacttgtaagtctgtttgagagagcttatgaaaacggctcatgacatgt 2413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 911 - 1012
Target Start/End: Original strand, 3845524 - 3845625
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||| ||||||||||| ||||| | |||| |||| | ||||||| || |||  || |||| | || ||||||||||| |||||| |||| ||||||||||    
T  3845524 ttgtgagactgtttgatagaacatctgaagacagattatgacatttttataatcttttttcagcttattttcataagttctccaagataacttatgaaaa 3845623  T
Q  1011 ca 1012  Q
    ||    
T  3845624 ca 3845625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 858 - 891
Target Start/End: Original strand, 16072948 - 16072981
Alignment:
Q  858 acacttacgacctgtttggattgacttatttgag 891  Q
    ||||||| ||||||||||||||||||||||||||    
T  16072948 acacttaggacctgtttggattgacttatttgag 16072981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 916 - 1005
Target Start/End: Original strand, 23808031 - 23808120
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    |||| ||||| || ||||||||||| ||| | |||||||||||| |   |||||| | || |||||||||| ||||||| ||||||||||    
T  23808031 agacggtttgggaaaacttatgaaagcagcttatgacatgttcacaaattgttttcatcttattttcataaactctccaagatagcttat 23808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 967 - 1012
Target Start/End: Complemental strand, 24280763 - 24280718
Alignment:
Q  967 ttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||| |||| |||||||||||||||||| |||||||||||| ||||    
T  24280763 ttttcaacttattttcataagctctccatgatagcttatgacaaca 24280718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 983 - 1012
Target Start/End: Original strand, 44284114 - 44284143
Alignment:
Q  983 ataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||||||||||||||||||||    
T  44284114 ataagctctccaggatagcttatgaaaaca 44284143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 915 - 1012
Target Start/End: Original strand, 50600144 - 50600241
Alignment:
Q  915 tagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||  ||||||||| ||||||  ||||||||||| ||    ||||||| | || ||||||||||| ||||||  |||||| |||||||||    
T  50600144 tagactgtttggaagaacttataaaaacaactcatgacatgtccacgagctgttttcagcttattttcataagttctccaatatagctgatgaaaaca 50600241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 903 - 1013
Target Start/End: Original strand, 52323848 - 52323960
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttca--taagctctccaggatag 1000  Q
    |||||||||||  |||||||||| |||| |||||  ||| | || |||||| || ||||  ||||||| |||| |||| ||  ||||||||||| |||||    
T  52323848 ataagcacttgcaagactgtttgtgagagcttattgaaataatttatgacacgtccataagctgttttcaacttatttccacataagctctccaagatag 52323947  T
Q  1001 cttatgaaaacaa 1013  Q
    ||||| |||||||    
T  52323948 cttatcaaaacaa 52323960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 4e-23; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 918 - 1087
Target Start/End: Original strand, 42215275 - 42215446
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagtta 1017  Q
    |||||||| ||||||| |||||||||| | ||||| ||||||||  ||||||| | || |||| |||||||||||||||||||| |||||||| | ||||    
T  42215275 actgtttgggagaactaatgaaaacagcttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggtta 42215374  T
Q  1018 tttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatccataagcgcttata 1087  Q
    |  ||||||||||||||   |||||| ||||||| |  |||| || |||||| | |||||||||||| ||||    
T  42215375 tagattatacaaaaacagtttgactttattttatctcatgttgtagaaatagttcatccataagcgcatata 42215446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 902 - 1018
Target Start/End: Original strand, 39551162 - 39551278
Alignment:
Q  902 tataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagc 1001  Q
    |||||||| |||| | |||||||| ||||| ||||| |||||  | ||||||||| || |  ||||||| |||| ||||| ||||||||||||||| |||    
T  39551162 tataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagc 39551261  T
Q  1002 ttatgaaaacaagttat 1018  Q
    |||||||||||| ||||    
T  39551262 ttatgaaaacaacttat 39551278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 915 - 1013
Target Start/End: Complemental strand, 12851280 - 12851182
Alignment:
Q  915 tagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||||||||| || ||||||||||||||| | || |||||||||||   ||||||   || |||||||||||||||| |||| |||||||||||||||    
T  12851280 tagactgtttgggaaaacttatgaaaacagcttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaa 12851182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 903 - 1012
Target Start/End: Original strand, 11569411 - 11569520
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||| ||||||| ||||||||| ||||| |||||| |||||| | ||||||||| ||||   |||||| | || ||||||| || ||||||| |||||||    
T  11569411 ataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagct 11569510  T
Q  1003 tatgaaaaca 1012  Q
    ||||||||||    
T  11569511 tatgaaaaca 11569520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 948 - 1012
Target Start/End: Complemental strand, 20672821 - 20672757
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||||  ||||||| | || ||||||||||||||||||||||||||||| ||||||    
T  20672821 atgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 927 - 1013
Target Start/End: Original strand, 26473730 - 26473816
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    |||| ||||||||||||| | |||||||||  |||  ||  ||| |||| |||||||||||||||| ||||||||||||||||||||    
T  26473730 gagagcttatgaaaacagcttatgacatgtctataagctagttttaacttattttcataagctctctaggatagcttatgaaaacaa 26473816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 30389200 - 30389106
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||| | |||||||| || | ||||||||||||||   |||||| | || ||||||||||| |||| |||| ||||||||||||||    
T  30389200 actgtttgagagagcatatgaaaatagctaatgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaaca 30389106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 916 - 1013
Target Start/End: Original strand, 7918413 - 7918510
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    |||||||||| |||| ||||||||||||  | | ||||||||||||  ||||||  |||| ||||  |||||||||||| ||||||||| ||||||||    
T  7918413 agactgtttgggagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaacaa 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 999 - 1086
Target Start/End: Complemental strand, 926508 - 926418
Alignment:
Q  999 agcttatgaaaacaagttatttattatacaaaaacaat---gacttaattttatgttgtgttataaaaatagcttatccataagcgcttat 1086  Q
    ||||||||||||||| ||||  || ||||||||||| |   ||||| ||||||| |||||||||| ||||||||||| |||| ||||||||    
T  926508 agcttatgaaaacaacttatagataatacaaaaacagttttgactttattttatcttgtgttatagaaatagcttattcatatgcgcttat 926418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 967 - 1011
Target Start/End: Complemental strand, 1433600 - 1433556
Alignment:
Q  967 ttttaaactcattttcataagctctccaggatagcttatgaaaac 1011  Q
    |||| |||| |||||||||||||||||||||||||||||||||||    
T  1433600 ttttcaacttattttcataagctctccaggatagcttatgaaaac 1433556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 915 - 1018
Target Start/End: Original strand, 9956779 - 9956883
Alignment:
Q  915 tagactgtttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||| ||||||||||||||||||||| |||| ||| ||| |||||||    ||||| | || ||||||||||| |||||| ||||| ||||||||||||    
T  9956779 tagaccgtttgagagaacttatgaaaatagtttatggcattgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaa 9956878  T
Q  1014 gttat 1018  Q
     ||||    
T  9956879 cttat 9956883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 868 - 961
Target Start/End: Complemental strand, 16162913 - 16162818
Alignment:
Q  868 cctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    ||||||||||||| ||||||||||  |||   || | |||| ||||||| ||||||||||||| ||||||||||||||| | ||||| ||||||||    
T  16162913 cctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgacctgttcata 16162818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 922 - 1012
Target Start/End: Complemental strand, 1930133 - 1930042
Alignment:
Q  922 tttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||| |||||||| ||||||||||| ||||||| |||||||  ||||||| | || ||||||| ||| || ||| |||||||||||||||||    
T  1930133 tttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaaca 1930042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1052 - 1137
Target Start/End: Complemental strand, 4389908 - 4389826
Alignment:
Q  1052 tgtgttataaaaatagcttatccataagcgcttatatgataagcacttcttatgatgtaagttgcaaattaagttatttatccaaa 1137  Q
    ||||||||| ||||||||||| |||| | ||| ||||||||||||||||   || | |||| |||||| |||||||||||||||||    
T  4389908 tgtgttatagaaatagcttattcatatgtgctcatatgataagcacttc---tgctataagctgcaaaataagttatttatccaaa 4389826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 927 - 1018
Target Start/End: Complemental strand, 5088944 - 5088853
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||| |||||| |||||||| || |||||| ||||  ||||||| |||| ||||  |||||||||||||||| |||| ||||||||| ||||    
T  5088944 gagagcttatggaaacagtttataacatgtccataagctgttttcaacttatttcaataagctctccaggatcgcttgtgaaaacaacttat 5088853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 868 - 992
Target Start/End: Complemental strand, 9700154 - 9700028
Alignment:
Q  868 cctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccct 965  Q
    |||||||||||| |||||||||||  |||   || | |||| ||||||| ||||| ||||||||| ||| ||||| || || ||||||||| ||||  ||    
T  9700154 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagct 9700055  T
Q  966 gttttaaactcattttcataagctctc 992  Q
    ||||| | || ||||||||||||||||    
T  9700054 gttttcaccttattttcataagctctc 9700028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 903 - 1010
Target Start/End: Original strand, 30191095 - 30191202
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    ||||||||||||||||||||||| |||| |||||| |||||  | |||||||||||| | | |||||| | || |||| ||||| |  | ||||||||||    
T  30191095 ataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagct 30191194  T
Q  1003 tatgaaaa 1010  Q
    ||| ||||    
T  30191195 tatcaaaa 30191202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 933 - 1012
Target Start/End: Original strand, 35220707 - 35220786
Alignment:
Q  933 ttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||||| ||||||||  ||||  || |||| | || ||||| ||||||||||||| ||||||||||||||||    
T  35220707 ttatgaaaacagtttatgacatgcccataagctatttttagcttatttttataagctctccagaatagcttatgaaaaca 35220786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 927 - 1013
Target Start/End: Original strand, 2458544 - 2458630
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||||||||||| |||| | ||| ||||||||||  ||||||| |  | |||| ||||||||||| ||||||||||||| ||||||    
T  2458544 gagaacttatgaagacagcttatggcatgttcataagctgttttcagtttatttccataagctctctaggatagcttatgtaaacaa 2458630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 917 - 994
Target Start/End: Complemental strand, 10120859 - 10120781
Alignment:
Q  917 gactgtttgagagaacttatgaaaacagttcatgacatgt-tcataccctgttttaaactcattttcataagctctcca 994  Q
    |||||||||||||||||||||||||||| | ||||||| | |||||  ||||||| | || ||||||||||| ||||||    
T  10120859 gactgtttgagagaacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctcca 10120781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1036 - 1098
Target Start/End: Complemental strand, 14482183 - 14482121
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcact 1098  Q
    |||||| ||||||| || ||||||| |||||| |||| ||||||| |||||||||||||||||    
T  14482183 tgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcact 14482121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 978 - 1012
Target Start/End: Complemental strand, 25097427 - 25097393
Alignment:
Q  978 ttttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||||||||||||||||||||||||||    
T  25097427 ttttcataagctctccaggatagcttatgaaaaca 25097393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 916 - 970
Target Start/End: Original strand, 41442420 - 41442474
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgtttt 970  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||  |||||||    
T  41442420 agactgtttgacagaacttatgaaaacaatttatgacatgttcatatgctgtttt 41442474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 868 - 1099
Target Start/End: Original strand, 28769256 - 28769491
Alignment:
Q  868 cctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccct 965  Q
    ||||||| ||||| ||||||| |||||||   || | |||||||||||| ||| | ||||||||| ||| || ||| ||   |||| |||| ||||   |    
T  28769256 cctgttttgattgtcttattttaggctatctactggcataagcacttgtgagattatttgagagagcttgtgtaaatagcatatgatatgtccataagtt 28769355  T
Q  966 gttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaa 1063  Q
    ||||| | || |||| ||||| |||||||  ||||||||||||||||  ||||   |||||  |||| | |  |||||||||||||  | |||||||  |    
T  28769356 gttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttatagtttgttatagga 28769455  T
Q  1064 atagcttatccataagcgcttatatgataagcactt 1099  Q
    ||||||||| |||||||  |||||||||||||||||    
T  28769456 atagcttatacataagcatttatatgataagcactt 28769491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 977 - 1018
Target Start/End: Complemental strand, 43709315 - 43709274
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  43709315 attttcataagctctccaggatagctcatgaaaacaacttat 43709274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 1012
Target Start/End: Original strand, 44236777 - 44236886
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| |||||||| | |||||  |||||||| || ||| |||||| || ||   | |||| | || ||||||||||||||||||  ||||||    
T  44236777 ataagcacttgtgagactgttcgggagaatctatgaaaatagctcacgacatgctcttaagttattttcagcttattttcataagctctccaatatagct 44236876  T
Q  1003 tatgaaaaca 1012  Q
    ||||||||||    
T  44236877 tatgaaaaca 44236886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 903 - 943
Target Start/End: Original strand, 2487962 - 2488002
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaaca 943  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  2487962 ataagcacttgtgagactgtttgggagaacttatgaaaaca 2488002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 972 - 1012
Target Start/End: Original strand, 9836877 - 9836917
Alignment:
Q  972 aactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  9836877 aactcatttccataagctctccaagatagcttatgaaaaca 9836917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 927 - 1078
Target Start/End: Complemental strand, 13459737 - 13459585
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattata 1026  Q
    |||||||||||||||||| | ||||||| ||||||  ||||||| | |  |||||||||||||||  |||||   |||||||||||| ||||   |||||    
T  13459737 gagaacttatgaaaacagcttatgacattttcataaactgttttcagcctattttcataagctctgtaggatgatttatgaaaacaacttatagcttata 13459638  T
Q  1027 ca-aaaacaatgacttaattttatgttgtgttataaaaatagcttatccataa 1078  Q
    || ||||   |||||| ||||||| || | | ||| ||||||||||| |||||    
T  13459637 cacaaaaagttgacttcattttatcttttatcatagaaatagcttatacataa 13459585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 903 - 1018
Target Start/End: Complemental strand, 24558967 - 24558854
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||| ||||||| |||||||||| |||||| ||||||||  ||| |||||| |||||||  || | || |||| |||| ||| |  |||||| |||||||    
T  24558967 ataaacacttgtgagactgtttgggagaacctatgaaaa--gtttatgacacgttcataagctatgttcaacttatttacattaagtctccaagatagct 24558870  T
Q  1003 tatgaaaacaagttat 1018  Q
    ||||||||||| ||||    
T  24558869 tatgaaaacaacttat 24558854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 903 - 1055
Target Start/End: Complemental strand, 34849220 - 34849065
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacag-ttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagc 1001  Q
    ||||| |||| | |||||||||| ||||||| |||||||||  || ||||||||||||||  | ||||| | || |||| |||||| ||| || || |||    
T  34849220 ataagtacttttgagactgtttgggagaactaatgaaaacaactttatgacatgttcataagccgttttcagctgatttccataagttctacaagaaagc 34849121  T
Q  1002 ttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtg 1055  Q
    |||||| ||||  |||| | ||||||||||| ||  |||||| ||||||| |||||    
T  34849120 ttatgataacagcttatatcttatacaaaaataatgtgactttattttatcttgtg 34849065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 911 - 994
Target Start/End: Original strand, 35643949 - 35644033
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgac-atgttcataccctgttttaaactcattttcataagctctcca 994  Q
    |||| |||||||||| || |||||||||||| |||| ||||| || ||||||  || |||| |||| ||||||||||||||||||    
T  35643949 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctctcca 35644033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 920 - 1012
Target Start/End: Complemental strand, 40071848 - 40071756
Alignment:
Q  920 tgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||| |||| |||||| |||||  | ||||||||||||||  | | ||| |||| ||||||||||||| || |||||||||| ||||||||    
T  40071848 tgtttgggagagcttatggaaacaacttatgacatgttcataatcagctttcaactaattttcataagctttctaggatagcttctgaaaaca 40071756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1056 - 1099
Target Start/End: Complemental strand, 6918992 - 6918949
Alignment:
Q  1056 ttataaaaatagcttatccataagcgcttatatgataagcactt 1099  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||    
T  6918992 ttataaaaatagcttatacataagcacttatatgataaacactt 6918949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 977 - 1012
Target Start/End: Complemental strand, 27028873 - 27028838
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||||||||| |||||||||||||||||    
T  27028873 attttcataagctctccaagatagcttatgaaaaca 27028838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 965 - 1086
Target Start/End: Original strand, 34522070 - 34522195
Alignment:
Q  965 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatac-aaaaacaa---tgacttaattttatgttgtgttata 1060  Q
    |||||| | ||||||||||||||||||  |||||||||| |||||| |  || |  ||||||| |||||  |   |||||| ||||||| |||||| |||    
T  34522070 tgtttttacctcattttcataagctctttaggatagcttttgaaaataccttttagattatactaaaaagtagtttgactttattttatcttgtgtcata 34522169  T
Q  1061 aaaatagcttatccataagcgcttat 1086  Q
     ||||||||||| |||||||||||||    
T  34522170 gaaatagcttattcataagcgcttat 34522195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 868 - 943
Target Start/End: Original strand, 6526169 - 6526246
Alignment:
Q  868 cctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaaca 943  Q
    |||||||||||||||||||| ||| ||||   || | |||||| ||||| ||| |||||||||||||||| |||||||    
T  6526169 cctgtttggattgacttattcgagcctatctactggcataagcccttgtgagattgtttgagagaacttaggaaaaca 6526246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 1078
Target Start/End: Complemental strand, 7646322 - 7646145
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    ||||||||| || | | |||||| ||||| |||||||||| | | |||||||||| ||   || |||| | || |||| |||||||||||| ||  ||||    
T  7646322 ataagcactagtgacaatgtttgggagaatttatgaaaactgcttatgacatgttgatcagctattttcagcttatttccataagctctcctggtcagct 7646223  T
Q  1003 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataa 1078  Q
    |||||| |||  ||||  |||||||||||||||  | |||| ||||||  || | ||||| ||||||||||| |||||    
T  7646222 tatgaagacagtttatagattatacaaaaacaatttaactttattttaccttttcttatagaaatagcttatacataa 7646145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 1013
Target Start/End: Complemental strand, 10923712 - 10923602
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||| ||||||| ||||  |||||||||  ||||||||||| |  | ||||| |  |||  ||||||| | || ||||||||||||||||||| ||||||    
T  10923712 ataaacacttgtaagacaatttgagagagtttatgaaaacaatgtaagacatatcaataaactgtttttatcttattttcataagctctccagaatagct 10923613  T
Q  1003 tatgaaaacaa 1013  Q
     ||||||||||    
T  10923612 aatgaaaacaa 10923602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 900 - 946
Target Start/End: Complemental strand, 10939494 - 10939448
Alignment:
Q  900 tgtataagcacttgttagactgtttgagagaacttatgaaaacagtt 946  Q
    ||||||||||||| | |||||||||  ||||||||||||||||||||    
T  10939494 tgtataagcacttctgagactgtttaggagaacttatgaaaacagtt 10939448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 982 - 1077
Target Start/End: Original strand, 13561345 - 13561442
Alignment:
Q  982 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccata 1077  Q
    ||||||||||| | |||||||| ||||||||||||||   |||||  |||||||  |||||| |||| || || ||||||| ||||||||||| ||||    
T  13561345 cataagctctcaatgatagcttgtgaaaacaagttataatttatatgaaaacaatttgactttatttaattttctgttatagaaatagcttattcata 13561442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 1012
Target Start/End: Complemental strand, 26410396 - 26410286
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaac-tcattttcataagctctccaggatagc 1001  Q
    |||||||||| | |||||| ||| |||| |||||| |||||| ||||||||||| || |  ||||||| | | | |||| |||||||||||||||| ||     
T  26410396 ataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtccagaagctgtttttagctttatttccataagctctccaggacagt 26410297  T
Q  1002 ttatgaaaaca 1012  Q
    || ||||||||    
T  26410296 ttttgaaaaca 26410286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 983 - 1012
Target Start/End: Original strand, 6509337 - 6509366
Alignment:
Q  983 ataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||||||||||||||||||||    
T  6509337 ataagctctccaggatagcttatgaaaaca 6509366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 977 - 1010
Target Start/End: Original strand, 10075579 - 10075612
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaa 1010  Q
    |||||||||||||||| |||||||||||||||||    
T  10075579 attttcataagctctctaggatagcttatgaaaa 10075612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 948 - 1009
Target Start/End: Complemental strand, 11795163 - 11795102
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    ||||||||| |||| |||||||| | || |||| |||||||||||||  |||||||||||||    
T  11795163 atgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaa 11795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 902 - 1012
Target Start/End: Complemental strand, 12361311 - 12361199
Alignment:
Q  902 tataagcacttgttagactgtttgagagaa--cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggata 999  Q
    |||||| |||||||||||| |||||||||   |||||  ||| || | ||||||||| ||||  ||||||| |||| |||| ||| |||||||| | |||    
T  12361311 tataagtacttgttagactctttgagagagatcttatagaaatagcttatgacatgtccataagctgttttcaacttatttccattagctctcctgaata 12361212  T
Q  1000 gcttatgaaaaca 1012  Q
     ||||||||||||    
T  12361211 acttatgaaaaca 12361199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 916 - 961
Target Start/End: Complemental strand, 25097478 - 25097433
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    |||||||||| |||||| ||||| ||||| ||||||||||||||||    
T  25097478 agactgtttgggagaacatatgagaacagctcatgacatgttcata 25097433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 977 - 1018
Target Start/End: Complemental strand, 34551162 - 34551121
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    ||||||||||||||||||||||| |||| |||||||| ||||    
T  34551162 attttcataagctctccaggataacttaagaaaacaacttat 34551121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 903 - 956
Target Start/End: Complemental strand, 34770984 - 34770931
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 956  Q
    |||||||||||| | ||||||||||||| | ||||||||||| | |||||||||    
T  34770984 ataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgacatgt 34770931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 993 - 1063
Target Start/End: Complemental strand, 38537617 - 38537545
Alignment:
Q  993 caggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaa 1063  Q
    |||||||| |||||||| ||  ||||  |||||||||||||||  |||||| ||||||| |||||||||||||    
T  38537617 caggatagtttatgaaagcagcttatagattatacaaaaacaaattgacttcattttatcttgtgttataaaa 38537545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 900 - 941
Target Start/End: Original strand, 41398059 - 41398100
Alignment:
Q  900 tgtataagcacttgttagactgtttgagagaacttatgaaaa 941  Q
    ||||||||||| ||  ||||||||||||||||||||||||||    
T  41398059 tgtataagcacctgcgagactgtttgagagaacttatgaaaa 41398100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 3e-21; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 903 - 1008
Target Start/End: Original strand, 31517694 - 31517799
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| |||||||||| |||||||||| ||||||  ||||||||||||||||  ||||||| | || |||||||||||||||||| || || |    
T  31517694 ataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagat 31517793  T
Q  1003 tatgaa 1008  Q
    ||||||    
T  31517794 tatgaa 31517799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 37811953 - 37811859
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||| |||||||||||||||||||||| | ||||||||||||||  ||||||| |||| |||| ||| ||||||||| ||| |||||||||||||    
T  37811953 actggttgagagaacttatgaaaacagcttatgacatgttcataaactgttttcaacttatttccattagctctccatgatggcttatgaaaaca 37811859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 940 - 1078
Target Start/End: Original strand, 36151496 - 36151636
Alignment:
Q  940 aacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tg 1037  Q
    ||||||| ||||||||| |||| |||||||| |||| |||||||||||||| | ||||| | ||| |||||||| ||||   |||||| |||||||  ||    
T  36151496 aacagtttatgacatgtccataacctgttttcaacttattttcataagctcactaggattgtttacgaaaacaatttataacttatacgaaaacaatttg 36151595  T
Q  1038 acttaattttatgttgtgttataaaaatagcttatccataa 1078  Q
    |||| ||||||| || ||||||  ||||||||||| |||||    
T  36151596 actttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 868 - 1090
Target Start/End: Complemental strand, 17269403 - 17269177
Alignment:
Q  868 cctgtttggattgacttatttgaggctat--tcttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccct 965  Q
    |||||||||||||||||||||||   |||  |||| | ||| ||||||| ||| ||||||  ||  |||||||||| |  | |||||||||||||    |    
T  17269403 cctgtttggattgacttatttgaacttatcttcttatttaaacacttgtgagattgtttggtagtgcttatgaaaataccttatgacatgttcatgagtt 17269304  T
Q  966 gttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaa 1063  Q
    ||||| |||| |||  | |||||||||||||||||||||||||||||| |||||  |||||  |||||||  |||||| |||||   || |||| || ||    
T  17269303 gtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaa 17269204  T
Q  1064 atagcttatccataagcgcttatatga 1090  Q
    ||| ||||| ||||||| |||||||||    
T  17269203 ataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 929 - 1013
Target Start/End: Complemental strand, 35925780 - 35925696
Alignment:
Q  929 gaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    |||||||||||||||| | ||||||||||||||  ||||||| |||| |||| ||||| ||||||| ||||||||||| ||||||    
T  35925780 gaacttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttatggaaacaa 35925696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 903 - 1079
Target Start/End: Original strand, 10199362 - 10199540
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| | ||| |||| ||||||| ||||||| || | ||||||||||||||   |||||| | || |||||||||||||||| |  ||||||    
T  10199362 ataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagct 10199461  T
Q  1003 tatgaaaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatccataag 1079  Q
    |||||||| |  ||||  ||||||| |||| |   |||||| ||||||| ||| |||||| ||||| |||||| |||||    
T  10199462 tatgaaaaaagcttatcgattatacgaaaatagtttgactttattttatcttgggttatagaaataacttatctataag 10199540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 904 - 1010
Target Start/End: Complemental strand, 4445823 - 4445717
Alignment:
Q  904 taagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagctt 1003  Q
    ||||||||||| |||||||||| ||||| |||||||| ||| | || ||||||||| |  ||||||| |||| ||||||| |||||||||| |  |||||    
T  4445823 taagcacttgtgagactgtttgggagaatttatgaaagcagcttataacatgttcagaagctgttttcaacttattttcacaagctctccaagtcagctt 4445724  T
Q  1004 atgaaaa 1010  Q
    |||||||    
T  4445723 atgaaaa 4445717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 903 - 1009
Target Start/End: Original strand, 37593638 - 37593744
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||| |||||||||||||||||| || |||| ||||| |||  | ||||||||||||||  ||||||| | || ||||||||||||||| ||  ||||||    
T  37593638 ataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagct 37593737  T
Q  1003 tatgaaa 1009  Q
    |||||||    
T  37593738 tatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 903 - 1011
Target Start/End: Original strand, 49692006 - 49692112
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    ||||| |||||| |||||||||||||||||||||||||| || | ||||||||| ||||   |||||| | || |||||||| || ||||||||||| ||    
T  49692006 ataagaacttgtgagactgtttgagagaacttatgaaaatagcttatgacatgtccatagtttgttttcagct-attttcat-agttctccaggataact 49692103  T
Q  1003 tatgaaaac 1011  Q
    |||||||||    
T  49692104 tatgaaaac 49692112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1036 - 1095
Target Start/End: Complemental strand, 871026 - 870967
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagc 1095  Q
    |||||||||||||| || |||||||||||||| |||| ||||||| ||||||||||||||    
T  871026 tgacttaattttatcttttgttataaaaatagtttatacataagcacttatatgataagc 870967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 967 - 1079
Target Start/End: Complemental strand, 35017628 - 35017512
Alignment:
Q  967 ttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaaca----atgacttaattttatgttgtgttataaa 1062  Q
    |||| |||| |||| |||||||||||||||| ||||||||||||||   |||  ||||||| ||||||     |||||| ||||||| |||| |||||||    
T  35017628 ttttcaacttatttccataagctctccaggacagcttatgaaaacagcatatagattatacgaaaacagtgtttgactttattttatcttgtattataaa 35017529  T
Q  1063 aatagcttatccataag 1079  Q
    |||||||||| ||||||    
T  35017528 aatagcttattcataag 35017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 1018
Target Start/End: Complemental strand, 25479668 - 25479582
Alignment:
Q  932 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||||||||| || | |||||||||||||    |||||| | || |||||||||||||||| |||||||||||||||||||| ||||    
T  25479668 cttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttat 25479582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 964 - 1094
Target Start/End: Complemental strand, 4200284 - 4200152
Alignment:
Q  964 ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataa 1061  Q
    ||||||||| || |||||||||||| |||||||||| |||| ||||||||  |||   |||||  |||||||  |||||| ||||||| || ||||||||    
T  4200284 ctgttttaagcttattttcataagccctccaggatatcttacgaaaacaatatatagcttatatgaaaacaacttgactttattttatcttttgttataa 4200185  T
Q  1062 aaatagcttatccataagcgcttatatgataag 1094  Q
    ||||| |||||  |||| | |||| ||||||||    
T  4200184 aaataacttatatataaacacttagatgataag 4200152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 903 - 1032
Target Start/End: Original strand, 7136952 - 7137081
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||| ||||||||| |  |||||| ||||||||||||||  | | ||||||| ||||||   | |||| | || ||||||||||| |||||| |||||||    
T  7136952 ataaacacttgttaaagagtttgaaagaacttatgaaaatcgcttatgacatattcataagttattttcagcttattttcataagttctccaagatagct 7137051  T
Q  1003 tatgaaaacaagttatttattatacaaaaa 1032  Q
    ||||||||||  ||||  ||||||||||||    
T  7137052 tatgaaaacagcttatagattatacaaaaa 7137081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 948 - 1036
Target Start/End: Complemental strand, 7472383 - 7472294
Alignment:
Q  948 atgacatgttcatacc-ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat 1036  Q
    ||||||||||||||   ||||||| | || |||||||||||||||||| ||||||||||| |||||  ||||  ||||||||||||||||    
T  7472383 atgacatgttcataaaactgttttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaat 7472294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 924 - 1013
Target Start/End: Original strand, 24460382 - 24460471
Alignment:
Q  924 tgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    |||||||| ||||||||| || | ||||||||||||||  ||||||  | || |||||  ||||||||| ||||||||||||||||||||    
T  24460382 tgagagaaattatgaaaatagcttatgacatgttcataagctgtttccagcttatttttgtaagctctcaaggatagcttatgaaaacaa 24460471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 903 - 1012
Target Start/End: Original strand, 33723336 - 33723445
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||| ||||||| |||||| ||| || |||||||| |||||| |||||||||||||||    |||||| | || |||| |||||||| | |||| |||||    
T  33723336 ataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcatgagatgttttcagcttatttccataagctttacagggtagct 33723435  T
Q  1003 tatgaaaaca 1012  Q
    ||||||||||    
T  33723436 tatgaaaaca 33723445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 922 - 1070
Target Start/End: Complemental strand, 3924721 - 3924571
Alignment:
Q  922 tttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttattta 1021  Q
    ||||||| |||||||||||||| || |||| ||||| |||   ||||||   || |||| ||||| |||| ||||||||||||| ||||||| | ||  |    
T  3924721 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaactaataga 3924622  T
Q  1022 ttatacaaaaaca--atgacttaattttatgttgtgttataaaaatagctt 1070  Q
    |||||| ||||||   || ||| ||||||| |||||||||| |||||||||    
T  3924621 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 3924571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 903 - 1010
Target Start/End: Complemental strand, 6279515 - 6279408
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    ||||||||||||  | |||||||||||| |||||| |||||||| |  |||||| ||||   |||||| | |  |||| ||||||||||| |||||||||    
T  6279515 ataagcacttgtgtggctgtttgagagagcttatggaaacagttaaccacatgtccataagttgttttcagcgtatttccataagctctctaggatagct 6279416  T
Q  1003 tatgaaaa 1010  Q
    ||||||||    
T  6279415 tatgaaaa 6279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 870 - 1012
Target Start/End: Original strand, 172492 - 172639
Alignment:
Q  870 tgtttggattgacttatttgaggctatt--cttgtataagcacttgtt---agactgtttgagagaacttatgaaaacagttcatgacatgttcataccc 964  Q
    ||||||||||||||||||||||  |||   ||||  ||||||||||||   | ||||| || ||||| |||||||||||||| ||| ||||||||||  |    
T  172492 tgtttggattgacttatttgagtttatctacttgcctaagcacttgttgtgacactgtctgggagaatttatgaaaacagtttatggcatgttcataggc 172591  T
Q  965 tgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||| |||| || |  ||||  |||||| ||||||| |||||||||    
T  172592 tgtttttaacttatatcaataatttctccaagatagctaatgaaaaca 172639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 964 - 1018
Target Start/End: Original strand, 7218089 - 7218143
Alignment:
Q  964 ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    ||||||| |||| ||||||||||| |||||||||||| |||||||||||| ||||    
T  7218089 ctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttat 7218143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 937 - 1096
Target Start/End: Complemental strand, 10854815 - 10854654
Alignment:
Q  937 gaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaaca-- 1034  Q
    |||||||| | |||||||||||| |  ||||||| | || |||||| |||||| | ||||||||  |||||||||||  |||  ||||||||||| ||      
T  10854815 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcttaagctgttcaggatagtatatgaaaacaacatatagattatacaaaatcagt 10854716  T
Q  1035 atgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagca 1096  Q
     |||||| ||||||| |||| ||  | ||||| ||||| ||||| | |||||||||||||||    
T  10854715 ttgactttattttatcttgtatttcagaaataacttattcataaccacttatatgataagca 10854654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 928 - 1018
Target Start/End: Original strand, 37842334 - 37842424
Alignment:
Q  928 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    ||||||||||||||||  | ||||||||||||||  | ||||| | || ||||| ||||| ||| || |||||||||||||||||| ||||    
T  37842334 agaacttatgaaaacatctaatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttat 37842424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 928 - 1010
Target Start/End: Complemental strand, 43338207 - 43338125
Alignment:
Q  928 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||||||||| |||||| | ||||||||||||||  || |||| | |  |||||||||||||||||| | |||||||||||||    
T  43338207 agaacttatggaaacagcttatgacatgttcataatctattttcagcctattttcataagctctccatgttagcttatgaaaa 43338125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 1008
Target Start/End: Original strand, 32515395 - 32515500
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| |||||||||| |||| |||||| ||||||   |||||||||  |||   |||||| |||| || |  |||||||||||| |||||||    
T  32515395 ataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaacttatatctataagctctccatgatagct 32515494  T
Q  1003 tatgaa 1008  Q
    ||||||    
T  32515495 tatgaa 32515500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 944
Target Start/End: Original strand, 43371845 - 43371886
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacag 944  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  43371845 ataagcacttgtgagactgtttgagagagcttatgaaaacag 43371886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 938 - 1010
Target Start/End: Complemental strand, 5047227 - 5047155
Alignment:
Q  938 aaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    ||||||||| | ||||| ||||||| ||||||| | || |||| |||||||||| || |||||||||||||||    
T  5047227 aaaacagttaaggacatattcatacgctgttttcagcttatttccataagctcttcatgatagcttatgaaaa 5047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 906 - 1010
Target Start/End: Original strand, 7262475 - 7262579
Alignment:
Q  906 agcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    ||||||| | |||| ||||  |||| ||||| ||||||| |  |||||||||||||  ||||||| | || |||| || ||||||| |||||||||||||    
T  7262475 agcacttttgagacggttttggagagcttataaaaacagcttttgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttat 7262574  T
Q  1006 gaaaa 1010  Q
    |||||    
T  7262575 gaaaa 7262579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 933 - 1013
Target Start/End: Complemental strand, 11137930 - 11137851
Alignment:
Q  933 ttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    |||||||||||||| ||||||||||||||  ||||||| | ||  |||| |||||||| ||| |||||||||| |||||||    
T  11137930 ttatgaaaacagtttatgacatgttcatatgctgtttt-agcttttttttataagctcaccatgatagcttatcaaaacaa 11137851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 932 - 1012
Target Start/End: Original strand, 11639399 - 11639479
Alignment:
Q  932 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||| | ||||||||| ||||  ||||||| | || |||||||||||||||| || ||| |||||| |||||    
T  11639399 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctctagaataacttatgcaaaca 11639479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 978 - 1018
Target Start/End: Original strand, 25005826 - 25005866
Alignment:
Q  978 ttttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||| ||||||||||||||||||||||||||||||| ||||    
T  25005826 tttttataagctctccaggatagcttatgaaaacaacttat 25005866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 873 - 1018
Target Start/End: Complemental strand, 29723637 - 29723490
Alignment:
Q  873 ttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgtttt 970  Q
    ||||||||||| |||||||  ||||  || | |||||||||||| | || |||||| |||||| ||| |||||| | ||||||||| ||||  |||||||    
T  29723637 ttggattgactaatttgagcttatttactagcataagcacttgtgatacagtttgaaagaactaatggaaacagcttatgacatgtccataaactgtttt 29723538  T
Q  971 aaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
     |||| |||| ||||| | || |||| |||||| ||||| ||| ||||    
T  29723537 caacttatttacataaccactgcagggtagcttgtgaaagcaacttat 29723490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 977 - 1013
Target Start/End: Original strand, 38651459 - 38651495
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||| |||||||||||||||||||||||||||||||    
T  38651459 atttttataagctctccaggatagcttatgaaaacaa 38651495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 982 - 1018
Target Start/End: Original strand, 47598454 - 47598490
Alignment:
Q  982 cataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||||||||||||||||||||||||||||||| ||||    
T  47598454 cataagctctccaggatagcttatgaaaacaacttat 47598490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 917 - 1012
Target Start/End: Complemental strand, 4576907 - 4576812
Alignment:
Q  917 gactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||| |||||||||||| |||| |||||||||| |||   ||| || | || ||||||||||| | | ||  ||||||||||||||||    
T  4576907 gactgtttgagacaacttatgaaaatagtttatgacatgtttataagttgtgttcagcttattttcataagttattcaatatagcttatgaaaaca 4576812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 931 - 1010
Target Start/End: Original strand, 4699597 - 4699676
Alignment:
Q  931 acttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||||||||||||  | ||||||||||||||  ||||||| | || ||||  ||||||||||| |||||| |||||||||    
T  4699597 acttatgaaaacaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaaa 4699676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 903 - 994
Target Start/End: Complemental strand, 6292608 - 6292518
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctcca 994  Q
    |||||||||| | ||| |||||| ||||| || | ||||||| | ||||||||||||||  ||||||| | || ||||||||||||||||||    
T  6292608 ataagcacttttgagattgtttgggagaattttt-aaaacagcttatgacatgttcataagctgttttcagcttattttcataagctctcca 6292518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 921 - 1012
Target Start/End: Complemental strand, 10744399 - 10744308
Alignment:
Q  921 gtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||| |||||||| ||||||||| | ||| ||||||||||  ||||||| | || ||||| ||||| |||| | || ||||||||||||||    
T  10744399 gtttgggagaacttgtgaaaacagcttatggcatgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaaca 10744308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 977 - 1095
Target Start/End: Complemental strand, 19389943 - 19389824
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaa-acaatgacttaattttatgttgtgttataaaaatagcttatcca 1075  Q
    ||||||| |||||||||| |||||||||||||||| | | | || |||||||||| |   |||||| ||||||| |||||| |||||| || |||||  |    
T  19389943 attttcacaagctctccaagatagcttatgaaaactattaaattcttatacaaaacagtttgactttattttatattgtgtaataaaagtaacttattta 19389844  T
Q  1076 taagcgcttatatgataagc 1095  Q
    ||||   |||||||||||||    
T  19389843 taagttattatatgataagc 19389824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 918 - 1005
Target Start/End: Original strand, 28689421 - 28689508
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    ||||||| |||||||||| | |||||| | ||||||||| ||||   |||||| | || ||||||||||||| |||| ||||||||||    
T  28689421 actgttttagagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttat 28689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 933 - 1036
Target Start/End: Complemental strand, 39596682 - 39596580
Alignment:
Q  933 ttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaa 1032  Q
    |||||||||||||| ||||||||||  ||  |||||| || || ||||| |||||||||||| |||||||||| ||| ||  ||||   |||||||||||    
T  39596682 ttatgaaaacagtttatgacatgttggtaagctgtttcaa-cttatttttataagctctccaagatagcttataaaaccatcttatagcttatacaaaaa 39596584  T
Q  1033 caat 1036  Q
    ||||    
T  39596583 caat 39596580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 903 - 1010
Target Start/End: Complemental strand, 44422815 - 44422708
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||| ||||| | ||||||| || |||| |||||||||| || | ||||||||| ||||  |||  |  | || ||||||||||||||||||||||||||    
T  44422815 ataaacacttttgagactgtctgggagagcttatgaaaatagcttatgacatgtccataagctgactacagcttattttcataagctctccaggatagct 44422716  T
Q  1003 tatgaaaa 1010  Q
    ||| ||||    
T  44422715 tataaaaa 44422708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 957
Target Start/End: Original strand, 5421898 - 5421952
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgtt 957  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||| | ||||||||    
T  5421898 ataagcacttgtgagaccgtttgtgagaacttataaaaacagtttaagacatgtt 5421952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 934 - 1000
Target Start/End: Complemental strand, 11695946 - 11695880
Alignment:
Q  934 tatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatag 1000  Q
    |||| |||||||| ||||||||| ||||  ||||||| |||| ||||||||||||| ||||| ||||    
T  11695946 tatggaaacagtttatgacatgtccataagctgttttcaacttattttcataagctttccagaatag 11695880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 1005
Target Start/End: Original strand, 19092338 - 19092439
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||| ||||  |||||||| |||| |  ||||||||| |||  ||||||||| ||||  ||||||| | || ||||||||||||||| ||||||||||    
T  19092338 ataagctcttgcgagactgttcgagacagtttatgaaaatagtctatgacatgt-cataaactgttttcaccttattttcataagctcttcaggatagct 19092436  T
Q  1003 tat 1005  Q
    |||    
T  19092437 tat 19092439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 961
Target Start/End: Complemental strand, 27807231 - 27807173
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    ||||||| |||| ||||||||||||||| ||||||||| ||| | ||||| ||||||||    
T  27807231 ataagcatttgtaagactgtttgagagagcttatgaaagcagctgatgacgtgttcata 27807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 911 - 961
Target Start/End: Complemental strand, 38001704 - 38001654
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    |||| |||||||||| |||||||||||||||||| | ||||| ||||||||    
T  38001704 ttgtgagactgtttgggagaacttatgaaaacagcttatgacctgttcata 38001654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 972 - 1010
Target Start/End: Original strand, 45667785 - 45667823
Alignment:
Q  972 aactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  45667785 aacttattttcataagctctccaggatagcttaagaaaa 45667823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 918 - 983
Target Start/End: Complemental strand, 4482031 - 4481966
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttca 983  Q
    ||||||||||||||||||||||||||  | || |||||||||||  ||||||| | || |||||||    
T  4482031 actgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattttca 4481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 903 - 1012
Target Start/End: Complemental strand, 4622209 - 4622100
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    ||||| |||||||||||||||||  ||| || |||  ||||  | ||||||||| ||||  ||||||| | || ||||||| |||||||||| ||||||     
T  4622209 ataagaacttgttagactgtttggaagatctaatgggaacatcttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagca 4622110  T
Q  1003 tatgaaaaca 1012  Q
    |||| |||||    
T  4622109 tatggaaaca 4622100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 870 - 943
Target Start/End: Original strand, 5886911 - 5886982
Alignment:
Q  870 tgtttggattgacttatttgaggctattcttgtataagcacttgttagactgtttgagagaacttatgaaaaca 943  Q
    ||||||||||||||||||||| |||  ||| | ||||||| |||  |||||||||| |||||||||||||||||    
T  5886911 tgtttggattgacttatttga-gcttatctggcataagcaattgcgagactgtttg-gagaacttatgaaaaca 5886982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 903 - 944
Target Start/End: Complemental strand, 8382457 - 8382416
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacag 944  Q
    ||||||| |||| ||||| |||||||||||||||||||||||    
T  8382457 ataagcatttgtgagactctttgagagaacttatgaaaacag 8382416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 987 - 1036
Target Start/End: Complemental strand, 23445366 - 23445317
Alignment:
Q  987 gctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat 1036  Q
    |||||||| |||||||||||||||||| ||||   |||||||||||||||    
T  23445366 gctctccaagatagcttatgaaaacaacttatggcttatacaaaaacaat 23445317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 965 - 1018
Target Start/End: Original strand, 26779941 - 26779994
Alignment:
Q  965 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||||| |||| ||||||||||| ||| || |||||||||||||||||| ||||    
T  26779941 tgttttcaacttattttcataagttcttcaagatagcttatgaaaacaacttat 26779994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 948 - 1013
Target Start/End: Complemental strand, 30257754 - 30257689
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||||||||||||  ||||||| | || ||||  |||||| ||||||||||| ||||||||||||    
T  30257754 atgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaa 30257689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 918 - 1072
Target Start/End: Original strand, 33185927 - 33186082
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagtta 1017  Q
    |||||||||||||  |||||||||||  | ||||||| | |||| |||||||| |||| |||| ||| |  |||| |||||||||||| ||||||| |||    
T  33185927 actgtttgagagagtttatgaaaacaaattatgacatttccataacctgttttcaacttatttacat-atatctctaggatagcttataaaaacaactta 33186025  T
Q  1018 tttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttat 1072  Q
    |   || || |||||||||  ||| | ||||||| || ||| ||| |||||||||||    
T  33186026 taacttgtataaaaacaattcgaccttattttatcttctgtaatagaaatagcttat 33186082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 980 - 1086
Target Start/End: Original strand, 33527178 - 33527286
Alignment:
Q  980 ttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccata 1077  Q
    |||||||| |||| |||||| ||||||||||||  ||||  ||||||  |||||| |  ||||  ||||||| || |||| || ||||||||||| ||||    
T  33527178 ttcataagatctcgaggataacttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcata 33527277  T
Q  1078 agcgcttat 1086  Q
    |||||||||    
T  33527278 agcgcttat 33527286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 908 - 961
Target Start/End: Original strand, 38170649 - 38170702
Alignment:
Q  908 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    ||||||| |||||| ||| |||| ||||||||||||| | ||||||||||||||    
T  38170649 cacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcata 38170702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 927 - 1012
Target Start/End: Original strand, 39270403 - 39270488
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||| ||||||||||||| |  || ||||| ||||  ||||||| |||| ||||||||| |||||| | | |||||||||||||||    
T  39270403 gagagcttatgaaaacagcttttggcatgtccataagctgttttcaacttattttcatatgctctctatggtagcttatgaaaaca 39270488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 903 - 956
Target Start/End: Complemental strand, 42336731 - 42336678
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 956  Q
    ||||||||||||  |||||||||||| ||||||||||||||  | |||||||||    
T  42336731 ataagcacttgtgcgactgtttgagataacttatgaaaacaacttatgacatgt 42336678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 903 - 1093
Target Start/End: Original strand, 44031953 - 44032145
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||||||||||| |  |||| |||||| || ||| | ||||||||| ||||  || |||| | || |||| |||||||||| || |||| ||    
T  44031953 ataagcacttgttagactgtctaggagagcttatgtaagcagctaatgacatgtccataagctattttcagctaatttccataagctcttcaagataact 44032052  T
Q  1003 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    || ||||| |  ||||   |||||  |||||||  |||||| ||||||  || ||||||| |||  |||||| ||||| | ||||||||||||    
T  44032053 taagaaaatagtttatagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgataa 44032145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1038 - 1095
Target Start/End: Complemental strand, 52286657 - 52286600
Alignment:
Q  1038 acttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagc 1095  Q
    |||| ||||||| || |||| || ||||| ||||| ||||||||||||||||||||||    
T  52286657 actttattttatcttttgttgtagaaatatcttattcataagcgcttatatgataagc 52286600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-19; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 898 - 1080
Target Start/End: Complemental strand, 39622072 - 39621890
Alignment:
Q  898 cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccagga 997  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||  | ||||||  ||||||   |||||| | || |||| | ||||||   | |||    
T  39622072 cttgtataagcacttgcgacactgtttgagagaacttatgaaaacaacttatgacaaattcataaattgttttcagcttatttccttaagcttgtccgga 39621973  T
Q  998 tagcttatgaaaacaagttatttattatacaaaaacaatgacttaattttatgttgtgttataaaaatagcttatccataagc 1080  Q
    || ||||||||||||  ||||  ||||||||||||   |||||| ||||||| |||||||||| ||||| ||||| |||||||    
T  39621972 taacttatgaaaacagcttatagattatacaaaaagtttgactttattttattttgtgttatagaaatatcttattcataagc 39621890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 903 - 1013
Target Start/End: Original strand, 12313127 - 12313237
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| ||| |||||| ||||| |||||||||||| | ||| ||||||||||   || ||| | || |||||||||||||||||| |||||||    
T  12313127 ataagcacttgtgagattgtttgggagaatttatgaaaacagcttatgccatgttcataagttgatttcaccttattttcataagctctccaagatagct 12313226  T
Q  1003 tatgaaaacaa 1013  Q
    |||| ||||||    
T  12313227 tatgtaaacaa 12313237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 930 - 1036
Target Start/End: Complemental strand, 33941998 - 33941892
Alignment:
Q  930 aacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaa 1029  Q
    ||||||||||||||  | |||||| |||||||  ||| ||| |||| ||| |||||| ||||||| |||||||||||||||||||||||   ||||||||    
T  33941998 aacttatgaaaacaacttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataacttatacaa 33941899  T
Q  1030 aaacaat 1036  Q
    |||||||    
T  33941898 aaacaat 33941892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 903 - 1072
Target Start/End: Complemental strand, 787448 - 787276
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| | |||||||| |||||||||||||||||| | ||||||||| ||||  ||||||| | || || | ||||| |  || | ||||| |    
T  787448 ataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgttttcagcttatctccataaaccatctaagatagtt 787349  T
Q  1003 tatg-aaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttat 1072  Q
    |||| ||||||  ||||  ||| |||||||||||  |||||| ||||||| |||||||||| |||||||||||    
T  787348 tatgaaaaacagattatagattttacaaaaacaagttgactttattttatcttgtgttatagaaatagcttat 787276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 916 - 1009
Target Start/End: Complemental strand, 33192304 - 33192212
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    ||||||||||| ||||||||||||||||||| ||||||| | ||||  ||||||| | || || || |||||||||||||||||||||||||||    
T  33192304 agactgtttga-agaacttatgaaaacagtttatgacatatccataagctgttttcagcttatatttataagctctccaggatagcttatgaaa 33192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 903 - 1018
Target Start/End: Complemental strand, 35486033 - 35485918
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    ||||| |||||| ||||||||||||||||||||  ||| ||  | |||| |||||||||  ||||||| | ||||||| |||| ||||| ||||||||||    
T  35486033 ataagaacttgtgagactgtttgagagaacttactaaagcaacttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagct 35485934  T
Q  1003 tatgaaaacaagttat 1018  Q
    ||| ||||||| ||||    
T  35485933 tataaaaacaacttat 35485918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 903 - 1034
Target Start/End: Complemental strand, 40158834 - 40158703
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    ||||| |||||| |||||| ||| | |||||||||||||||| | |||||||||| |||   |||||| | || | || |||||||||||||| ||| ||    
T  40158834 ataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataact 40158735  T
Q  1003 tatgaaaacaagttatttattatacaaaaaca 1034  Q
    ||||||||||| |||||  |||||| ||||||    
T  40158734 tatgaaaacaacttattgcttatacgaaaaca 40158703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 903 - 1013
Target Start/End: Original strand, 38078364 - 38078474
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    ||||||||| || ||||| | ||||||| |||||| ||| |||| | | ||||||||||   |||||| | ||||||| ||||||||||||| |||||||    
T  38078364 ataagcactggtgagactatctgagagagcttatggaaatagttaaaggcatgttcataagttgttttgagctcatttacataagctctccaagatagct 38078463  T
Q  1003 tatgaaaacaa 1013  Q
    |||||||||||    
T  38078464 tatgaaaacaa 38078474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 927 - 1012
Target Start/End: Original strand, 35378994 - 35379079
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||| ||||||||||||| | ||||| ||||||||   |||||| | || |||||||||||||||||| |||||||||||||||||    
T  35378994 gagagcttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 927 - 1034
Target Start/End: Complemental strand, 42420089 - 42419982
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattata 1026  Q
    ||||||||| ||||| || | ||| ||||||||||   |||||| | ||||||| |||||||| |||||||||||||||||||| |  ||||  ||||||    
T  42420089 gagaacttaggaaaaaagcttatgtcatgttcataaattgttttcagctcatttccataagctatccaggatagcttatgaaaatagcttatagattata 42419990  T
Q  1027 caaaaaca 1034  Q
    ||||||||    
T  42419989 caaaaaca 42419982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 911 - 1036
Target Start/End: Complemental strand, 1626009 - 1625883
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||| ||||| |||||||||||||||||||  || | |||||| ||||||||   |||||| | || |||||| |||| |||||| ||||||||||||||    
T  1626009 ttgtaagactatttgagagaacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaa 1625910  T
Q  1010 acaagttatttattatacaaaaacaat 1036  Q
    |||| ||||   |||||| ||||||||    
T  1625909 acaacttataacttatacgaaaacaat 1625883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 919 - 1013
Target Start/End: Complemental strand, 15120283 - 15120189
Alignment:
Q  919 ctgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||||| |||| |||||| |||||  | |||||||||||||   ||||||||| || ||||| |||||||||||| ||||||||| ||||||||    
T  15120283 ctgtttgggagagcttatggaaacaacttatgacatgttcattagctgttttaagcttattttgataagctctccatgatagcttacgaaaacaa 15120189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 964 - 1079
Target Start/End: Complemental strand, 43259889 - 43259772
Alignment:
Q  964 ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataa 1061  Q
    ||||||| | || |||| |||||||||| || |||| || |||||||||  || || ||||||||||||| ||  ||||| ||||||| ||||||||||     
T  43259889 ctgtttttagcttatttccataagctcttcaagatacctaatgaaaacagcttgttgattatacaaaaactatttgactttattttatcttgtgttatag 43259790  T
Q  1062 aaatagcttatccataag 1079  Q
    ||||||||||||| ||||    
T  43259789 aaatagcttatccgtaag 43259772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 948 - 1012
Target Start/End: Original strand, 1939331 - 1939395
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||| ||||  ||||||| |||| |||| |||||||||||||| ||||||||||||||||    
T  1939331 atgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaaca 1939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 903 - 970
Target Start/End: Original strand, 5902503 - 5902570
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgtttt 970  Q
    |||| ||||||| ||||||||||  ||||||||||||||||| | ||||||||||||||  |||||||    
T  5902503 ataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacatgttcataaactgtttt 5902570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 982 - 1086
Target Start/End: Complemental strand, 10143209 - 10143103
Alignment:
Q  982 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataag 1079  Q
    ||||| ||||||| ||||||||||||||| || ||||   ||||| ||||||| |  ||||||||||||| || ||||||| ||||| ||||| ||||||    
T  10143209 cataaactctccatgatagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataag 10143110  T
Q  1080 cgcttat 1086  Q
    | |||||    
T  10143109 cacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 869 - 998
Target Start/End: Original strand, 43529776 - 43529907
Alignment:
Q  869 ctgtttggattgacttatttgaggctat-tcttg-tataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctg 966  Q
    ||||||| |||||||||||||||  ||| | ||| ||||||||||| | | |||||||| ||||| |||||||||||| | ||| ||||||||||  ||     
T  43529776 ctgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataagcta 43529875  T
Q  967 ttttaaactcattttcataagctctccaggat 998  Q
    |||| |  | |||||||||||||||| |||||    
T  43529876 ttttcagtttattttcataagctctctaggat 43529907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 903 - 961
Target Start/End: Complemental strand, 1801784 - 1801726
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    |||||||||||| | | |||||| |||||||||||||||||| | ||||||||||||||    
T  1801784 ataagcacttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcata 1801726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 903 - 961
Target Start/End: Complemental strand, 4350806 - 4350748
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    ||||||||||   ||| ||||||||||||||||||||||||| | ||||||||||||||    
T  4350806 ataagcacttaagagattgtttgagagaacttatgaaaacagcttatgacatgttcata 4350748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 972 - 1018
Target Start/End: Complemental strand, 9477999 - 9477953
Alignment:
Q  972 aactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||    
T  9477999 aacttattttcataacctctccaggatagcttatgaaaacaacttat 9477953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 948 - 1010
Target Start/End: Original strand, 34652035 - 34652097
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    ||||||||| ||||  ||||||| |||| |||| ||||||||||||| |||||||||||||||    
T  34652035 atgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 972 - 1018
Target Start/End: Original strand, 36863648 - 36863694
Alignment:
Q  972 aactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||    
T  36863648 aacttattttcataagctctccaagatagcttatgaaaacaatttat 36863694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 1094
Target Start/End: Complemental strand, 11514012 - 11513824
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| ||||||||| ||||| |||||||||||||  |||| ||||   |||  || |||| | || |||| || ||| |||||| |||||||    
T  11514012 ataagcacttgtgagactgttttagagagcttatgaaaacag--catggcatgcctataagctattttcagcttatttccaaaagttctccatgatagct 11513915  T
Q  1003 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 1094  Q
    ||||||||||| ||||   |||||  |||||||  |||||| ||||||| || |||| |   |||| ||||| ||||| | |||||||||||||    
T  11513914 tatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgttgt---aataacttatacataaacccttatatgataag 11513824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 918 - 987
Target Start/End: Complemental strand, 13220534 - 13220465
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataag 987  Q
    ||||||||||||||||||| ||||||  | ||||| ||||||||  |||||||||||| |||| ||||||    
T  13220534 actgtttgagagaacttataaaaacaacttatgacttgttcataagctgttttaaacttatttgcataag 13220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 1012
Target Start/End: Complemental strand, 16867854 - 16867746
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| | ||||||| ||||| |||| |||   |||| ||||||| ||||||   |||||| |||| |||| ||||||||||||| |||||||    
T  16867854 ataagcacttgtgacactgttttagagagcttaagaagt-agtttatgacatattcataagttgttttcaacttatttccataagctctccaagatagct 16867756  T
Q  1003 tatgaaaaca 1012  Q
    | ||||||||    
T  16867755 tgtgaaaaca 16867746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 916 - 1009
Target Start/End: Original strand, 32106766 - 32106859
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||||||||| |||||||||||||||||| | ||||||| |   ||  ||||||| || | || |||||||||||| ||||||| |||||||||    
T  32106766 agactgtttgtgagaacttatgaaaacagcttatgacatatctgtaagctgttttcaaattatgttcataagctcttcaggataacttatgaaa 32106859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 922 - 1011
Target Start/End: Complemental strand, 33256837 - 33256748
Alignment:
Q  922 tttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaac 1011  Q
    |||| |||| ||||||||||||| | ||||||||||||||  ||||| | | || ||||||||| | ||| |||||| ||||||||||||    
T  33256837 tttgggagagcttatgaaaacagcttatgacatgttcataaactgttctcagcttattttcatacggtcttcaggatggcttatgaaaac 33256748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 920 - 997
Target Start/End: Complemental strand, 38809425 - 38809348
Alignment:
Q  920 tgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccagga 997  Q
    |||||| |||||||||| ||| ||| | |||||||||| |||  ||||||| |||| |||| ||||||||||||||||    
T  38809425 tgtttgggagaacttattaaaccagcttatgacatgttaataatctgttttcaacttatttccataagctctccagga 38809348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 977 - 1018
Target Start/End: Complemental strand, 39983384 - 39983343
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  39983384 attttcattagctctccaggatagcttatgaaaacaacttat 39983343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 964 - 1077
Target Start/End: Complemental strand, 4090404 - 4090289
Alignment:
Q  964 ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataa 1061  Q
    ||||||| |||  |||| ||| |||||||  |||||||||||| |||||| ||||  |||||||  |||||||  ||||| ||||||| |||||||||      
T  4090404 ctgttttcaacatatttccatgagctctcagggatagcttatgtaaacaacttatagattataccgaaacaatttgactttattttatcttgtgttatgg 4090305  T
Q  1062 aaatagcttatccata 1077  Q
    ||||||||||| ||||    
T  4090304 aaatagcttattcata 4090289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 972 - 1012
Target Start/End: Original strand, 10884544 - 10884584
Alignment:
Q  972 aactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  10884544 aacttattttcataagctctctaggatagcttatgaaaaca 10884584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 911 - 1018
Target Start/End: Complemental strand, 20952464 - 20952356
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgac-atgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||||||||| ||| ||||||||||||||||||||| ||| | || |||||   || |||| |||| ||||||||||| ||||||  |||||| || |||    
T  20952464 ttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttttttcaacttattttcataagttctccaatatagctaataaaa 20952365  T
Q  1010 acaagttat 1018  Q
    |||| ||||    
T  20952364 acaacttat 20952356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 977 - 1013
Target Start/End: Complemental strand, 24097850 - 24097814
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||||||||||||||||||||| |||||||||||||    
T  24097850 attttcataagctctccaggataacttatgaaaacaa 24097814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 869 - 994
Target Start/End: Original strand, 28677577 - 28677704
Alignment:
Q  869 ctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctg 966  Q
    ||||||||||||| || ||||||  ||||  |||| ||||| |||  | |||||||||| |||||||||||||||||| | ||||||| ||||||   ||    
T  28677577 ctgtttggattgatttttttgagcttatttacttgcataagtactgctaagactgtttgggagaacttatgaaaacagcttatgacattttcataagttg 28677676  T
Q  967 ttttaaactcattttcataagctctcca 994  Q
    ||||   || |||| |||||||||||||    
T  28677677 ttttcggcttatttccataagctctcca 28677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 919 - 1088
Target Start/End: Complemental strand, 28933923 - 28933753
Alignment:
Q  919 ctgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||||||  ||| ||||||||||||  | ||| |||||||||| | |||||| |||| ||||  || ||||||| |||||||||||||||||||| ||||    
T  28933923 ctgtttggaagagcttatgaaaacaacttatggcatgttcatagc-tgttttcaacttatttctatcagctctctaggatagcttatgaaaacaatttat 28933825  T
Q  1019 ttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatat 1088  Q
       ||| |  |||| ||  ||| || ||||||| || ||||||| ||||||||||| ||| ||| |||||||    
T  28933824 aacttaaatgaaaataatttgatttgattttatcttttgttatataaatagcttatacatgagcacttatat 28933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 927 - 987
Target Start/End: Complemental strand, 31096393 - 31096333
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataag 987  Q
    |||| ||||||||||||||| || |||||| ||||  |||||||||||| |||||||||||    
T  31096393 gagagcttatgaaaacagttaataacatgtccataagctgttttaaacttattttcataag 31096333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 918 - 1010
Target Start/End: Complemental strand, 41817269 - 41817177
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||||||  ||||| |||||||||||  | |||||||||| |||   |||||| | || |||| ||||||||||||||||||| |||||||||    
T  41817269 actgtttaggagaatttatgaaaacatcttatgacatgttgataatttgttttcagcttatttccataagctctccaggatagtttatgaaaa 41817177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 936 - 1008
Target Start/End: Original strand, 44438826 - 44438898
Alignment:
Q  936 tgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 1008  Q
    ||||||||| | |||||||||||||| |||||||| | || |||| || ||| ||||||||||| ||||||||    
T  44438826 tgaaaacagcttatgacatgttcataacctgttttcagcttatttccacaagatctccaggataacttatgaa 44438898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 911 - 1009
Target Start/End: Complemental strand, 750779 - 750680
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||| ||| ||||||  |||||||||||||| || | ||||||| |||||||  ||||||| | || |||| |||||| |||||| ||||||||||||||    
T  750779 ttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttgagcttatttgcataagttctccaagatagcttatgaaa 750680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 918 - 1009
Target Start/End: Original strand, 1494415 - 1494506
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    ||||||||||||| ||||||||||||| | ||||||||| ||||  ||||||| | || ||||||| || ||| ||| ||| ||| ||||||    
T  1494415 actgtttgagagagcttatgaaaacagcttatgacatgtccataaactgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 1494506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 977 - 1012
Target Start/End: Complemental strand, 3050016 - 3049981
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||||||||| |||||||||||||||||    
T  3050016 attttcataagctctccatgatagcttatgaaaaca 3049981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 979 - 1010
Target Start/End: Original strand, 9530758 - 9530789
Alignment:
Q  979 tttcataagctctccaggatagcttatgaaaa 1010  Q
    ||||||||||||||||||||||||||||||||    
T  9530758 tttcataagctctccaggatagcttatgaaaa 9530789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 934 - 1005
Target Start/End: Complemental strand, 25790211 - 25790140
Alignment:
Q  934 tatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    |||| |||||| | || |||||||| ||  ||||||| |||| |||||||||||||||||||||||| ||||    
T  25790211 tatggaaacagcttattacatgttcctaagctgttttgaacttattttcataagctctccaggatagattat 25790140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 901 - 944
Target Start/End: Complemental strand, 32837441 - 32837398
Alignment:
Q  901 gtataagcacttgttagactgtttgagagaacttatgaaaacag 944  Q
    ||||||| |||||| |||||||||| ||||||||||||||||||    
T  32837441 gtataagtacttgtgagactgtttgggagaacttatgaaaacag 32837398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 977 - 1036
Target Start/End: Complemental strand, 40279239 - 40279180
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat 1036  Q
    ||||||||||| ||||||  ||||||||||||||||| |||| | |||||| ||||||||    
T  40279239 attttcataagttctccaacatagcttatgaaaacaacttatatcttataccaaaacaat 40279180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 860 - 890
Target Start/End: Complemental strand, 4508342 - 4508312
Alignment:
Q  860 acttacgacctgtttggattgacttatttga 890  Q
    |||||||||||||||||||||||||||||||    
T  4508342 acttacgacctgtttggattgacttatttga 4508312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1094
Target Start/End: Original strand, 17952790 - 17952848
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 1094  Q
    |||||| ||||||| || ||||||| |||||||||||  |||||| |||||||||||||    
T  17952790 tgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataag 17952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 948 - 1018
Target Start/End: Complemental strand, 33942221 - 33942151
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    ||||||||||||||  ||||||| | || |||||||| ||||||| | ||| |||||||||||||| ||||    
T  33942221 atgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttat 33942151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 964 - 1018
Target Start/End: Complemental strand, 40279462 - 40279408
Alignment:
Q  964 ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    ||||||| |||| ||||||||||| ||||||  ||||||||||||||||| ||||    
T  40279462 ctgttttcaacttattttcataagttctccaatatagcttatgaaaacaacttat 40279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 978 - 1079
Target Start/End: Original strand, 43299430 - 43299535
Alignment:
Q  978 ttttcataagctctccaggat-agcttatgaaaacaagttattta-ttatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatc 1073  Q
    ||||||| ||||| ||||||| ||||||||||||||| ||||  | |||||||||||||   |||||| ||||||| || ||||||| |||||||| ||     
T  43299430 ttttcatgagctcaccaggattagcttatgaaaacaacttatagatttatacaaaaacagtttgactttattttatcttctgttatataaatagctaatt 43299529  T
Q  1074 cataag 1079  Q
    ||||||    
T  43299530 cataag 43299535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 927 - 1008
Target Start/End: Complemental strand, 43570506 - 43570425
Alignment:
Q  927 gagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 1008  Q
    |||||||||||||||||| | ||||||| |||||||  || |||||  || ||||||||||||| |||||||| |||||||||    
T  43570506 gagaacttatgaaaacagcttatgacattgttcataagcttttttag-cttattttcataagctttccaggatggcttatgaa 43570425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 933 - 1010
Target Start/End: Complemental strand, 680589 - 680512
Alignment:
Q  933 ttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||||||||||| | |||||||||| |||  ||||||| | || ||||||| ||| ||| || |||||||||||||||    
T  680589 ttatgaaaacagcttatgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaa 680512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 903 - 956
Target Start/End: Complemental strand, 1318352 - 1318299
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 956  Q
    |||||||||||| |||||||||| |||| ||||||||||||  | |||||||||    
T  1318352 ataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgt 1318299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 928 - 1005
Target Start/End: Complemental strand, 1647327 - 1647250
Alignment:
Q  928 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    ||||||||||||||||| | |||||||| |||||  ||||||| | || |||| ||||||||||| |  |||||||||    
T  1647327 agaacttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataagctctctataatagcttat 1647250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1036 - 1093
Target Start/End: Complemental strand, 3102674 - 3102617
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    |||||| ||||||| || || |||||||||||||||| |||||||  |||||||||||    
T  3102674 tgactttattttatattttgctataaaaatagcttatacataagcagttatatgataa 3102617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 927 - 1012
Target Start/End: Complemental strand, 9556331 - 9556246
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||| ||||||||||||  | ||||||||| ||||    | ||| |||| ||||||||||||| || |||||||||||||||||||    
T  9556331 gagagcttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagctttctaggatagcttatgaaaaca 9556246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1056 - 1093
Target Start/End: Original strand, 26484193 - 26484230
Alignment:
Q  1056 ttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  26484193 ttatagaaatagcttatccataagcacttatatgataa 26484230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 997 - 1087
Target Start/End: Original strand, 33931618 - 33931710
Alignment:
Q  997 atagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataagcgcttata 1087  Q
    ||||||||||||||||  ||||   |||||||||||||||  ||| | ||||||| | |||| ||| ||||||||||| || |||||||||||    
T  33931618 atagcttatgaaaacagcttatagcttatacaaaaacaatctgaccttattttatctagtgtaatagaaatagcttattcacaagcgcttata 33931710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 927 - 1012
Target Start/End: Original strand, 35378510 - 35378595
Alignment:
Q  927 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||||||||| | ||||| ||||||||   | |||| | || ||||||||||||| |||| ||| ||||| |||||||    
T  35378510 gagaacttatgaaaacagctgatgacttgttcataagttattttcagcttattttcataagctatccaagattgcttacgaaaaca 35378595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 940 - 1013
Target Start/End: Complemental strand, 43173301 - 43173228
Alignment:
Q  940 aacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||||| ||||||||| || |  |||||||||||| |||| |||||| |||||| |||||| ||| |||||||    
T  43173301 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaa 43173228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 911 - 1072
Target Start/End: Original strand, 43279488 - 43279652
Alignment:
Q  911 ttgttagactgtttg--agagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatga 1007  Q
    |||| ||||||||||  |||||| |||||||||||| | |||||| | ||||||  || |||| |||| ||||||| ||| ||||||  ||||||||| |    
T  43279488 ttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcacaagttctccaatatagcttataa 43279587  T
Q  1008 aaacaagttatttattatacaaaaacaatg--acttaattttatgttgtgttataaaaatagcttat 1072  Q
    |||||| ||||  |  |||||||||||||   || | ||||||| || || ||||||||||||||||    
T  43279588 aaacaacttat--agcatacaaaaacaatttcacattattttatcttttgatataaaaatagcttat 43279652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1036 - 1093
Target Start/End: Original strand, 43530200 - 43530257
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    |||||| ||||||| ||||  |||| ||||||||||| |||||| |||||||||||||    
T  43530200 tgactttattttatcttgtcctatagaaatagcttattcataagtgcttatatgataa 43530257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 977 - 1018
Target Start/End: Original strand, 43985031 - 43985072
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    ||||||||||||||| || |||||||||||||||||| ||||    
T  43985031 attttcataagctcttcaagatagcttatgaaaacaacttat 43985072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 7e-19; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 906 - 1072
Target Start/End: Complemental strand, 33887943 - 33887775
Alignment:
Q  906 agcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    ||||||||| | | |||||||||||| ||||||||| || | |||||||||||| |   |||||| |||| |||| |||||||  | |||||||||||||    
T  33887943 agcacttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttatttccataagcatttcaggatagcttat 33887844  T
Q  1006 gaaaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttat 1072  Q
    |||||||  ||||| ||||||| ||||||   ||| ||  |||||| |||||||||||||||| |||||    
T  33887843 gaaaacagtttattgattatactaaaacagtttgagtttgttttatcttgtgttataaaaatatcttat 33887775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 911 - 1036
Target Start/End: Original strand, 20368142 - 20368267
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||| ||||| |||| |||||||||||||||||  | ||||||||||||||  ||  ||| |||| ||||||||||| |||||| || ||||||||||||    
T  20368142 ttgtaagactatttgggagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaa 20368241  T
Q  1011 caagttatttattatacaaaaacaat 1036  Q
    ||| ||||   | |||||||||||||    
T  20368242 caacttataactcatacaaaaacaat 20368267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 928 - 1012
Target Start/End: Complemental strand, 31624181 - 31624097
Alignment:
Q  928 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||||||| | ||||||||||||||  ||||||| |||| ||||||||||  |||||| |||||| ||||||||||    
T  31624181 agaacttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaaca 31624097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 977 - 1069
Target Start/End: Original strand, 31776303 - 31776396
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagct 1069  Q
    |||| ||| |||||||||  ||||||||||||||||| ||||| |||||||||||||||  |||||| ||||||| |||||||||| ||||||||    
T  31776303 atttccattagctctccattatagcttatgaaaacaacttattaattatacaaaaacaatttgactttattttat-ttgtgttatagaaatagct 31776396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 922 - 1094
Target Start/End: Original strand, 9093528 - 9093704
Alignment:
Q  922 tttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttattt 1020  Q
    |||| |||| |||||||||| || | ||||||| ||| ||| |||||||| | || |||||| |||| |||| | || ||||||||||||||  ||||      
T  9093528 tttgtgagagcttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatag 9093627  T
Q  1021 attatacaaaaacaatg--acttaattttatgttgtgttataaaaatagcttatccataagcgcttat-atgataag 1094  Q
     |||||| ||||||||   |||| ||||||| || || |||| ||||||||||||||||||||||||| ||||||||    
T  9093628 cttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataagcgcttatcatgataag 9093704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 977 - 1035
Target Start/End: Original strand, 31812041 - 31812099
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa 1035  Q
    |||||||||||||||||| |||||||||||||||||| |||| | |||||||| |||||    
T  31812041 attttcataagctctccaagatagcttatgaaaacaacttatatcttatacaataacaa 31812099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1037 - 1086
Target Start/End: Original strand, 3171521 - 3171570
Alignment:
Q  1037 gacttaattttatgttgtgttataaaaatagcttatccataagcgcttat 1086  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  3171521 gacttaattttatcttttgttataaaaatagcttatgcataagcgcttat 3171570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 916 - 1013
Target Start/End: Original strand, 8035115 - 8035212
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    ||||| |||| ||||||||| |||||||  | |||||||| ||||| | |||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  8035115 agactatttgggagaacttaagaaaacaacttatgacatggtcataacttgttttcaacttattttcgtaagctttctaggataacttatgaaaacaa 8035212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 907 - 1012
Target Start/End: Original strand, 31686321 - 31686426
Alignment:
Q  907 gcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatg 1006  Q
    |||||||| | | ||||||||||||||||| ||||||  | |||||| ||| |||  ||||||| | || || | | |||||||||||||||||||||||    
T  31686321 gcacttgtgacattgtttgagagaacttatcaaaacaacttatgacaagtttataatctgttttcagcttatgtccgtaagctctccaggatagcttatg 31686420  T
Q  1007 aaaaca 1012  Q
    ||||||    
T  31686421 aaaaca 31686426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 903 - 1012
Target Start/End: Original strand, 32171337 - 32171446
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||  ||||||||||||||| ||||||||||||| | |||||| || || |  || |||| | || |||| |||||||| ||||||||| ||    
T  32171337 ataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataagctatccaggataact 32171436  T
Q  1003 tatgaaaaca 1012  Q
     |||||||||    
T  32171437 aatgaaaaca 32171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 911 - 1012
Target Start/End: Complemental strand, 33089614 - 33089513
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||| ||||| ||| ||||||||||||||||||| | | |||||||| |||   |||||||  || ||||||||| |||| ||| |||||||||||||||    
T  33089614 ttgtgagactatttcagagaacttatgaaaacagcttaggacatgtttataagttgttttacgcttattttcataggctccccaagatagcttatgaaaa 33089515  T
Q  1011 ca 1012  Q
    ||    
T  33089514 ca 33089513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 977 - 1086
Target Start/End: Complemental strand, 4006756 - 4006645
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatcc 1074  Q
    |||||||||| |||||  ||||||||||||||||||| ||||   ||||| ||||||||  |||||| |||||||  | ||||||| ||||| ||||| |    
T  4006756 attttcataacctctcagggatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgc 4006657  T
Q  1075 ataagcgcttat 1086  Q
    |||||| |||||    
T  4006656 ataagcacttat 4006645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 982 - 1095
Target Start/End: Complemental strand, 4248995 - 4248880
Alignment:
Q  982 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataag 1079  Q
    ||||||||||||  ||||||||| |||||||  |||||  |||||||||| ||||  ||||| ||||||| || ||||||  |||||||||||  |||||    
T  4248995 cataagctctccgagatagcttaggaaaacaccttattgtttatacaaaatcaatttgactttattttatcttttgttattgaaatagcttatatataag 4248896  T
Q  1080 cgcttatatgataagc 1095  Q
    | ||||||||| ||||    
T  4248895 cacttatatgacaagc 4248880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 948 - 1012
Target Start/End: Complemental strand, 6647458 - 6647394
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||||   |||||| |||| |||||||||||||||| | |||||||||||||||||    
T  6647458 atgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaaca 6647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 965 - 1033
Target Start/End: Original strand, 7945900 - 7945967
Alignment:
Q  965 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaac 1033  Q
    |||||||| || |||| |||||||||||||||||||| |||||||||| |||||  |||||||||||||    
T  7945900 tgttttaagcttatttccataagctctccaggatagc-tatgaaaacaggttatagattatacaaaaac 7945967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1041 - 1093
Target Start/End: Original strand, 31668779 - 31668831
Alignment:
Q  1041 taattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    |||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||    
T  31668779 taattttatgttttgttatagaaatagcttatacataagcacttatatgataa 31668831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 920 - 1013
Target Start/End: Complemental strand, 103530 - 103437
Alignment:
Q  920 tgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    |||| |||||||||||  ||||||| | ||||||| ||||||  ||||||  | ||  ||||||| || |||||||||||||||||||||||||    
T  103530 tgttcgagagaacttacaaaaacagcttatgacatattcataaactgtttacagcttgttttcattagatctccaggatagcttatgaaaacaa 103437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 1012
Target Start/End: Complemental strand, 34403971 - 34403862
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||| |||||||||||||||||  ||||| ||| |||||||  | ||||||||||||||   |||||| | || |||| ||||||||||  || | ||||    
T  34403971 ataaacacttgttagactgtttaggagaagttaagaaaacaacttatgacatgttcataaggtgttttcaccttatttccataagctctttagtacagct 34403872  T
Q  1003 tatgaaaaca 1012  Q
    ||||||||||    
T  34403871 tatgaaaaca 34403862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 918 - 1010
Target Start/End: Complemental strand, 2263293 - 2263201
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    ||||||||||||||||||||||||||    |||||||||||||| | |||||| ||||  |||  ||||| |||| | |||||||||| ||||    
T  2263293 actgtttgagagaacttatgaaaacaacatatgacatgttcatagcgtgttttcaacttctttctataaggtctcgaagatagcttataaaaa 2263201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 916 - 1072
Target Start/End: Complemental strand, 2735173 - 2735014
Alignment:
Q  916 agactgtttgagagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaag 1014  Q
    ||||||||||||| ||||||||||||| | | |||||| | ||||||  |||||||   || ||||||||||| | | || ||| |||||||||||||      
T  2735173 agactgtttgagataacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagc 2735074  T
Q  1015 ttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttat 1072  Q
    ||||  |||||||||||| ||  | |||| ||||||| || ||||||| | |||||||||    
T  2735073 ttatagattatacaaaaataatttaactttattttatcttttgttatagacatagcttat 2735014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 932 - 1012
Target Start/End: Original strand, 28641732 - 28641812
Alignment:
Q  932 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||| | || |||||||||||  ||||||| | || ||||||||||||||| ||| ||||||  ||||||||    
T  28641732 cttatgaaaacagcttataacatgttcataagctgtttttagcttattttcataagctctgcagaatagctattgaaaaca 28641812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 901 - 1013
Target Start/End: Original strand, 32386515 - 32386627
Alignment:
Q  901 gtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatag 1000  Q
    ||||||| |||||| |||| |||||| ||| |||||| ||| |  | || |||||| || | | |||||| | || |||||||||||||||||||||||     
T  32386515 gtataagtacttgtgagaccgtttgaaagagcttatggaaatatcttataacatgtccacaacttgttttcagcttattttcataagctctccaggataa 32386614  T
Q  1001 cttatgaaaacaa 1013  Q
    || ||||||||||    
T  32386615 ctaatgaaaacaa 32386627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 901 - 1012
Target Start/End: Complemental strand, 769256 - 769146
Alignment:
Q  901 gtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatag 1000  Q
    |||||| ||||||| ||||||||||   |||||||||||||||  | ||||||||||||||  ||||||| |||| | |||| |||| ||  || | |||    
T  769256 gtataaacacttgtgagactgtttggatgaacttatgaaaacatcttatgacatgttcataagctgttttcaacttactttcttaag-tcctcaagttag 769158  T
Q  1001 cttatgaaaaca 1012  Q
    ||||||||||||    
T  769157 cttatgaaaaca 769146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1038 - 1089
Target Start/End: Complemental strand, 32861407 - 32861356
Alignment:
Q  1038 acttaattttatgttgtgttataaaaatagcttatccataagcgcttatatg 1089  Q
    |||||||||||| || ||||||| ||||||| ||||||||||| ||||||||    
T  32861407 acttaattttatcttttgttatagaaatagcgtatccataagcacttatatg 32861356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 928 - 986
Target Start/End: Complemental strand, 1575986 - 1575928
Alignment:
Q  928 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataa 986  Q
    ||||||||||||||||  | ||||||||||||||  ||||||| |||| ||||||||||    
T  1575986 agaacttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 946 - 1012
Target Start/End: Complemental strand, 4246483 - 4246417
Alignment:
Q  946 tcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||| ||||  ||||||| |||| ||||| ||| ||||||||  ||||||||||||||||    
T  4246483 tcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaaca 4246417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 4324423 - 4324516
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||||||||| ||||||  | ||||||||| | ||  ||| ||| | || |||| |||||| | ||||||||||||||||||||||    
T  4324423 actgtttgagagaacttat-aaaacaacttatgacatgtccctaaactgcttttagcttatttgcataagttttccaggatagcttatgaaaaca 4324516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 948 - 1010
Target Start/End: Complemental strand, 4420714 - 4420652
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    ||||||||||||||  ||||||| | || |||| ||||||||||||| ||||||||| |||||    
T  4420714 atgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaa 4420652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 911 - 961
Target Start/End: Original strand, 9202952 - 9203002
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    |||| |||||||||||||||||||||||||| |  ||||| ||||||||||    
T  9202952 ttgtgagactgtttgagagaacttatgaaaataactcatggcatgttcata 9203002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1089
Target Start/End: Complemental strand, 33259798 - 33259744
Alignment:
Q  1035 atgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatg 1089  Q
    ||||||| | ||||| || ||||||||||||||||||| ||||||| ||||||||    
T  33259798 atgacttcaatttatcttttgttataaaaatagcttatacataagcacttatatg 33259744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 994 - 1099
Target Start/End: Original strand, 33826780 - 33826884
Alignment:
Q  994 aggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgat 1091  Q
    |||||| ||||| |||||   |||| ||||||||||||||| |  ||||| |||| || || ||||||| |||||||||||   | ||||||||||||||    
T  33826780 aggataacttataaaaactgcttatatattatacaaaaacagtttgactttatttaatcttctgttatataaatagcttat---ttagcgcttatatgat 33826876  T
Q  1092 aagcactt 1099  Q
    ||||||||    
T  33826877 aagcactt 33826884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1036 - 1093
Target Start/End: Original strand, 3217279 - 3217336
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    |||||| ||||||| || | ||| ||||||||||||| ||||||| ||||||||||||    
T  3217279 tgactttattttatcttctcttacaaaaatagcttatacataagcacttatatgataa 3217336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 982 - 1088
Target Start/End: Complemental strand, 6654652 - 6654544
Alignment:
Q  982 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataag 1079  Q
    ||||||||||||| |||||| ||| ||||||  |||    ||| |||||||||||  |||||||||||||  | ||||||| ||||| ||||| ||||||    
T  6654652 cataagctctccaagatagcatattaaaacagcttaaagtttaaacaaaaacaatttgacttaattttattatttgttatagaaataacttatacataag 6654553  T
Q  1080 cgcttatat 1088  Q
    | |||||||    
T  6654552 cccttatat 6654544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 903 - 952
Target Start/End: Original strand, 10353715 - 10353764
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgac 952  Q
    |||||||||||| |||||||||| |||| ||| ||||||||||| |||||    
T  10353715 ataagcacttgtgagactgtttgggagagcttgtgaaaacagtttatgac 10353764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 907 - 1012
Target Start/End: Complemental strand, 33116696 - 33116591
Alignment:
Q  907 gcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatg 1006  Q
    |||||||| |||||||||||| ||| |||||||||||  | ||||||||| ||||  || ||||||  | |||| ||||||||    |||| ||||||||    
T  33116696 gcacttgtgagactgtttgagggaatttatgaaaacaacttatgacatgtgcataaactcttttaagtttatttccataagcttgttaggaaagcttatg 33116597  T
Q  1007 aaaaca 1012  Q
    ||||||    
T  33116596 aaaaca 33116591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 903 - 992
Target Start/End: Original strand, 35070421 - 35070510
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctc 992  Q
    ||||||||||||  ||||||||| ||||||  |||||||||| | | | || | |||||  ||||||| |||| ||||||||||||||||    
T  35070421 ataagcacttgtgggactgtttgggagaacaaatgaaaacagcttaaggcaagatcataagctgttttcaacttattttcataagctctc 35070510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 4e-17; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 982 - 1099
Target Start/End: Original strand, 912681 - 912801
Alignment:
Q  982 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat---gacttaattttatgttgtgttataaaaatagcttatccataa 1078  Q
    |||||||| |||| ||||| |||| ||||||| |||||  |||||  ||||||||   ||||| ||||||| |||||||||| ||||| ||||| |||||    
T  912681 cataagctttccaagatagtttataaaaacaacttattgcttatatgaaaacaattttgactttattttatattgtgttatagaaataacttattcataa 912780  T
Q  1079 gcgcttatatgataagcactt 1099  Q
     ||||||||||||||||||||    
T  912781 acgcttatatgataagcactt 912801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 925 - 1072
Target Start/End: Complemental strand, 17368770 - 17368621
Alignment:
Q  925 gagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttatta 1024  Q
    |||||||||||||||||||  | ||||||||||||||  | ||||| | || |||| ||||| ||||||| |||||||||||||||||| ||||  ||||    
T  17368770 gagagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatagatta 17368671  T
Q  1025 tacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttat 1072  Q
     |||||||||   |||||| |||| ||  ||||||||  |||||||||||    
T  17368670 cacaaaaacagtttgacttcatttaatactgtgttattgaaatagcttat 17368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 922 - 1099
Target Start/End: Complemental strand, 39105562 - 39105381
Alignment:
Q  922 tttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttattt 1020  Q
    |||| ||||| |||||||||||| | ||||||| |||||||  || |||| | || ||||||||||| |||||| |||||||||||||||||  ||||      
T  39105562 tttgggagaatttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatag 39105463  T
Q  1021 attatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttat-atgataagcactt 1099  Q
     |||||| |||||||  | |||| |||| || ||  | |||| ||||||||||| ||||||||||||| |||||||||||||    
T  39105462 cttatacgaaaacaatttaacttcatttcatatttagctatagaaatagcttatacataagcgcttatcatgataagcactt 39105381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 903 - 1012
Target Start/End: Original strand, 17258837 - 17258946
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| | | | |||| |||||| |||||||| || | ||||||||||||||  ||||||| | || ||||||||||||||| |||||||| |    
T  17258837 ataagcacttgtgacattctttgggagaacctatgaaaatagcttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtt 17258936  T
Q  1003 tatgaaaaca 1012  Q
    ||||||||||    
T  17258937 tatgaaaaca 17258946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 979 - 1099
Target Start/End: Original strand, 18543226 - 18543349
Alignment:
Q  979 tttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa---tgacttaattttatgttgtgttataaaaatagcttatcca 1075  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||   |||||| |||| || || ||| ||| ||||||||| | |     
T  18543226 tttcataagctctccaggatagcttatgaaaacaacttatatcttatataaaaacaagtttgactttatttaatattttgtgatacaaatagcttttacg 18543325  T
Q  1076 taagcgcttatatgataagcactt 1099  Q
    ||||| | ||||||||||| ||||    
T  18543326 taagcccctatatgataagtactt 18543349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 928 - 1078
Target Start/End: Original strand, 18857377 - 18857531
Alignment:
Q  928 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcata--agctctccaggatagcttatgaaaacaagttatttattat 1025  Q
    |||| |||||||||||| | ||||||||||||||  ||||||| |||| | |||||||  | ||||||| || ||||||||||||||  ||||  |||||    
T  18857377 agaatttatgaaaacagctaatgacatgttcataagctgtttttaacttaatttcataacacctctccaagacagcttatgaaaacagcttatagattat 18857476  T
Q  1026 acaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataa 1078  Q
    | ||||||||  |||||| |||||||  ||||||||  ||||||||||| |||||    
T  18857477 agaaaaacaatttgactttattttatcgtgtgttattgaaatagcttattcataa 18857531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 909 - 1013
Target Start/End: Original strand, 37611175 - 37611279
Alignment:
Q  909 acttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 1008  Q
    |||||| ||| ||||||||||| ||||||||||||  |  |||||||||||||  ||||||| |  | |||| ||||||||||||| |||||||||||||    
T  37611175 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaa 37611274  T
Q  1009 aacaa 1013  Q
    |||||    
T  37611275 aacaa 37611279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 909 - 1013
Target Start/End: Original strand, 37787905 - 37788009
Alignment:
Q  909 acttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 1008  Q
    |||||| ||| ||||||||||| ||||||||||||  |  |||||||||||||  ||||||| |  | |||| ||||||||||||| |||||||||||||    
T  37787905 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaa 37788004  T
Q  1009 aacaa 1013  Q
    |||||    
T  37788005 aacaa 37788009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 925 - 1012
Target Start/End: Original strand, 13604825 - 13604912
Alignment:
Q  925 gagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||| ||||||||||||| | ||||||||| |||||  |||||| |||| ||||||||||||||| || |||| ||||||||||||    
T  13604825 gagagagcttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagataacttatgaaaaca 13604912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 904 - 1018
Target Start/End: Complemental strand, 2568773 - 2568659
Alignment:
Q  904 taagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagctt 1003  Q
    ||||||||||  |||||||||   ||||||||||||||||| | ||||||| ||||||   | |||| | || |||||||| ||||||||| ||||||||    
T  2568773 taagcacttgagagactgtttagaagaacttatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagctt 2568674  T
Q  1004 atgaaaacaagttat 1018  Q
    |||||||||| ||||    
T  2568673 atgaaaacaacttat 2568659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 932 - 1012
Target Start/End: Original strand, 21768180 - 21768260
Alignment:
Q  932 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||| | ||||||||| ||||| ||||||| |||| |||||| |||||||| || |||| ||||||||||||    
T  21768180 cttatgaaaacagcttatgacatgtccatacgctgttttcaacttattttcgtaagctcttcaagataacttatgaaaaca 21768260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 903 - 1018
Target Start/End: Original strand, 12459955 - 12460070
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||| ||| |||||||||| |||||| ||||||||||  | ||||||||||||||   ||||||   || ||||||||||||||| || |||||||    
T  12459955 ataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatgttcatatgttgtttttggcttattttcataagctctgcaagatagct 12460054  T
Q  1003 tatgaaaacaagttat 1018  Q
    | |||| |||| ||||    
T  12460055 tgtgaagacaacttat 12460070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1043 - 1101
Target Start/End: Complemental strand, 11684397 - 11684339
Alignment:
Q  1043 attttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcacttct 1101  Q
    ||||||| || ||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  11684397 attttatattttgttataaaaatagcttatacattagcacttatatgataagcacttct 11684339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 903 - 961
Target Start/End: Original strand, 25720371 - 25720429
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    |||||||||||| ||||||| ||||||| ||||| |||||| |||||||||||||||||    
T  25720371 ataagcacttgtgagactgtctgagagagcttataaaaacaattcatgacatgttcata 25720429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 903 - 1008
Target Start/End: Complemental strand, 4619823 - 4619718
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||  | |||||||| |||| ||||||||||||  | ||||||||||||||  ||| ||| | || |||| |||||| |||||| |||||||    
T  4619823 ataagcacttgcaacactgtttgggagagcttatgaaaacaactaatgacatgttcataagctggtttcaccttatttccataagttctccatgatagct 4619724  T
Q  1003 tatgaa 1008  Q
    ||||||    
T  4619723 tatgaa 4619718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 954 - 1086
Target Start/End: Original strand, 4014429 - 4014563
Alignment:
Q  954 tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgt 1051  Q
    ||||||||  ||||||| | || ||||||||||| |||||| |||||||||||||||||  ||||   || | |||||||||  | |||| ||||||| |    
T  4014429 tgttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatct 4014528  T
Q  1052 tgtgttataaaaatagcttatccataagcgcttat 1086  Q
    | || |||| ||||||||||| |||| ||||||||    
T  4014529 tttgctatagaaatagcttatacataggcgcttat 4014563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 909 - 1036
Target Start/End: Original strand, 6587067 - 6587194
Alignment:
Q  909 acttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 1008  Q
    |||||||| ||||||||  ||||||||  ||||||| | |||||| |||||||  ||||||  | || ||||||| ||| ||||||  ||||||||||||    
T  6587067 acttgttaaactgtttggaagaacttaaaaaaacagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatagcttatgaa 6587166  T
Q  1009 aacaagttatttattatacaaaaacaat 1036  Q
    ||||| ||||   |||||| ||||||||    
T  6587167 aacaacttatagcttatacgaaaacaat 6587194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1036 - 1099
Target Start/End: Original strand, 20982224 - 20982287
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcactt 1099  Q
    |||||| |||||||  | ||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  20982224 tgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcactt 20982287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 911 - 1018
Target Start/End: Original strand, 37526161 - 37526268
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||| ||||||||||||||| |||||||| |||    |||||||||| |||  ||||||| | || |||| |||||||||||||| | | ||||||||||    
T  37526161 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaa 37526260  T
Q  1011 caagttat 1018  Q
    ||| ||||    
T  37526261 caacttat 37526268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 911 - 1018
Target Start/End: Original strand, 37588322 - 37588429
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||| ||||||||||||||| |||||||| |||    |||| ||||| |||  ||||||| | || |||| |||||||||||||| ||| ||||||||||    
T  37588322 ttgtgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaa 37588421  T
Q  1011 caagttat 1018  Q
    ||| ||||    
T  37588422 caacttat 37588429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 903 - 957
Target Start/End: Original strand, 499685 - 499739
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgtt 957  Q
    |||||||| |||||| ||||||| |||||||||||||||||| | ||||||||||    
T  499685 ataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgtt 499739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 922 - 1012
Target Start/End: Complemental strand, 11707152 - 11707062
Alignment:
Q  922 tttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||||||||||| |||| || | |||||||||| |||   |||||| | || ||||||| ||||||| || |||||||||||||||||    
T  11707152 tttgagagaacttatcaaaatagattatgacatgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaaca 11707062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 965 - 1095
Target Start/End: Complemental strand, 31694572 - 31694440
Alignment:
Q  965 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaa 1062  Q
    |||||| |||| ||||||||||||||| || |  |||||| || ||||| ||||   || || ||||||| |  ||||| | |||||||| ||||||| |    
T  31694572 tgttttcaacttattttcataagctctacaagtgagcttaagagaacaacttatagtttgtataaaaacagtttgactttagtttatgttttgttataga 31694473  T
Q  1063 aatagcttatccataagcgcttatatgataagc 1095  Q
     ||||||||| ||||||| ||||||||||||||    
T  31694472 catagcttattcataagcacttatatgataagc 31694440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 1012
Target Start/End: Original strand, 33533494 - 33533602
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| | ||||||| ||||| |||| |||   |||| ||||||| ||||||   |||||| |||| |||| ||||||||||||| |||||||    
T  33533494 ataagcacttgtgacactgttttagagagcttaagaagt-agtttatgacatattcataagttgttttcaacttatttccataagctctccaagatagct 33533592  T
Q  1003 tatgaaaaca 1012  Q
    | ||||||||    
T  33533593 tgtgaaaaca 33533602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 906 - 1010
Target Start/End: Original strand, 10125675 - 10125779
Alignment:
Q  906 agcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 1005  Q
    ||||||||| | | ||| |||||||||||||| |||||  | |||||||||| |||   |||||| | || |||||||||||||||||| | || |||||    
T  10125675 agcacttgtgacattgtctgagagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataagctctccatggtaacttat 10125774  T
Q  1006 gaaaa 1010  Q
    |||||    
T  10125775 gaaaa 10125779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 911 - 1018
Target Start/End: Complemental strand, 29925950 - 29925842
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||| |||| ||||| |||||||||||||||||| | |||||| |||||||    | |||| |||| ||||||||||| ||||||  |||||||||| ||    
T  29925950 ttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataagttctccaatatagcttatgtaa 29925851  T
Q  1010 acaagttat 1018  Q
    |||| ||||    
T  29925850 acaacttat 29925842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 912 - 1012
Target Start/End: Complemental strand, 36638854 - 36638754
Alignment:
Q  912 tgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaac 1011  Q
    |||||||||||| | || |  |||||||||| ||  ||||||||||||||  || |||| | || |||| ||||||||||| |||||| |||||||||||    
T  36638854 tgttagactgttggggaaagtttatgaaaactgtgtatgacatgttcataagcttttttcagcttatttccataagctctctaggataacttatgaaaac 36638755  T
Q  1012 a 1012  Q
    |    
T  36638754 a 36638754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 977 - 1049
Target Start/End: Original strand, 10272459 - 10272533
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttat 1049  Q
    |||||||||| ||||||| ||| |||||||||||||| ||||   |||||| |||||||  ||||||||||||||    
T  10272459 attttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaattttat 10272533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1043 - 1094
Target Start/End: Complemental strand, 10391327 - 10391276
Alignment:
Q  1043 attttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 1094  Q
    ||||||| || ||||||||||||||||||| | ||||| |||||||||||||    
T  10391327 attttatcttttgttataaaaatagcttatacgtaagcacttatatgataag 10391276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 977 - 1012
Target Start/End: Complemental strand, 40731511 - 40731476
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||||||| |||||||||||||||||||    
T  40731511 attttcataagctctcaaggatagcttatgaaaaca 40731476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 965 - 1099
Target Start/End: Complemental strand, 12425625 - 12425488
Alignment:
Q  965 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaa 1062  Q
    |||||| |||| ||||||||||| |||||| |||||||| ||||||||  ||||   |||||| |||||||  | |||| ||||||| || |  |||| |    
T  12425625 tgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttactatata 12425526  T
Q  1063 aatagcttatccataagcgcttat-atgataagcactt 1099  Q
    ||||| |||| |||||||| |||| ||||||| |||||    
T  12425525 aatagtttatacataagcgtttatcatgataaacactt 12425488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 948 - 1018
Target Start/End: Original strand, 14674899 - 14674969
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||||||||| |||  |||||||||||  ||||||||||| ||| ||||||| ||||||| ||||| ||||    
T  14674899 atgacatgtttataaactgttttaaacatattttcataagttctacaggatatcttatgagaacaacttat 14674969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 948 - 1018
Target Start/End: Original strand, 15308992 - 15309062
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||| ||||||||| |||||||| | || ||||||||||| |||| | ||||||| |||||||||| ||||    
T  15308992 atgatatgttcataacctgttttcatcttattttcataagatctcaatgatagctaatgaaaacaacttat 15309062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1037 - 1099
Target Start/End: Complemental strand, 19177459 - 19177397
Alignment:
Q  1037 gacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcactt 1099  Q
    ||||||||||||| || |||| || |||||| |||| ||||||| |||||||||||| |||||    
T  19177459 gacttaattttatcttctgttgtagaaatagtttatacataagcacttatatgataatcactt 19177397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 982 - 1012
Target Start/End: Original strand, 38047888 - 38047918
Alignment:
Q  982 cataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||||||||||||||||||||||    
T  38047888 cataagctctccaggatagcttatgaaaaca 38047918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 983 - 1013
Target Start/End: Original strand, 40205108 - 40205138
Alignment:
Q  983 ataagctctccaggatagcttatgaaaacaa 1013  Q
    |||||||||||||||||||||||||||||||    
T  40205108 ataagctctccaggatagcttatgaaaacaa 40205138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1037 - 1094
Target Start/End: Complemental strand, 1961972 - 1961915
Alignment:
Q  1037 gacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 1094  Q
    ||||||||||||  || |||||||||||||||||||  ||| || |||||||||||||    
T  1961972 gacttaattttacattttgttataaaaatagcttatatataggcacttatatgataag 1961915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 920 - 1012
Target Start/End: Complemental strand, 28777093 - 28777000
Alignment:
Q  920 tgtttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||| |||||||||| |||| |||| ||||||| ||||| |  || |||| | || |||||||| || |||||| |||||||||||||||||    
T  28777093 tgtttgtgagaacttataaaaatagtttatgacattgttcaaaaactatttttatcttattttcattagttctccaagatagcttatgaaaaca 28777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 939 - 1012
Target Start/End: Original strand, 41957441 - 41957514
Alignment:
Q  939 aaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||| | ||||||||| ||||   |||||| | || ||||||||||| |||| |||||||||||||||||||    
T  41957441 aaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaaca 41957514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 980 - 1086
Target Start/End: Complemental strand, 42646954 - 42646846
Alignment:
Q  980 ttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaatg--acttaattttatgttgtgttataaaaatagcttatccata 1077  Q
    ||||||||||||||| ||| | |||||||||||  ||||   ||| |||||||||||   ||||||||||||  | ||||||||||||| ||||| ||||    
T  42646954 ttcataagctctccaagatcgtttatgaaaacaccttatagcttaaacaaaaacaatttaacttaattttatcctttgttataaaaatatcttatacata 42646855  T
Q  1078 agcgcttat 1086  Q
      |||||||    
T  42646854 cccgcttat 42646846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-16; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 903 - 1085
Target Start/End: Complemental strand, 28165207 - 28165023
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||| | ||||| ||||||| | |||||| |||||| ||| ||| ||||||||  ||||||| |||| |||| ||||||||||||| |||||||    
T  28165207 ataagcacttatgagactctttgagatagcttatggaaacagctcaagacctgttcataagctgttttcaacttatttccataagctctccatgatagct 28165108  T
Q  1003 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgctta 1085  Q
    ||| || |||  ||||   |||||  |||||||  |||||| ||||||| || ||||||| ||| | ||||| ||||||| ||||    
T  28165107 tataaagacagtttatagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 932 - 1086
Target Start/End: Complemental strand, 12110447 - 12110291
Alignment:
Q  932 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaa 1031  Q
    ||||||||||||  | |||||||||||| |  ||||||| |  | ||||||||||| ||| || |||||||||||||||||  ||||   |||||| |||    
T  12110447 cttatgaaaacaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaa 12110348  T
Q  1032 acaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttat 1086  Q
    ||||  |||||| ||||||| |||||| ||| |||||| |||| |||||| ||||||    
T  12110347 acaatttgactttattttatcttgtgtaatagaaataggttattcataagtgcttat 12110291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 977 - 1094
Target Start/End: Complemental strand, 47941365 - 47941243
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttat---gttgtgttataaaaatagctta 1071  Q
    |||||||||| |||||| ||||||||||||||||||  ||||  ||||||| |||| |||  ||| | ||||| |   ||||||||||| ||||||||||    
T  47941365 attttcataaactctccgggatagcttatgaaaacagtttatagattatactaaaataatttgaccttattttgtcttgttgtgttatagaaatagctta 47941266  T
Q  1072 tccataagcgcttatatgataag 1094  Q
    | | |||||||||||||||||||    
T  47941265 ttcttaagcgcttatatgataag 47941243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 982 - 1095
Target Start/End: Original strand, 39169449 - 39169563
Alignment:
Q  982 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatccataag 1079  Q
    ||||||||||| |||||||||||||||||||  ||||  ||||||||||||||   |||||| ||||| | |||||| ||  ||||||||||| | ||||    
T  39169449 cataagctctc-aggatagcttatgaaaacagtttatagattatacaaaaacagtctgacttcattttttcttgtgtaatggaaatagcttattcgtaag 39169547  T
Q  1080 cgcttatatgataagc 1095  Q
    |||| |||||||||||    
T  39169548 cgctcatatgataagc 39169563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 910 - 1009
Target Start/End: Original strand, 27626084 - 27626183
Alignment:
Q  910 cttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    ||||| ||| ||||||||| | |||||| |||||| | ||||||||| ||||  |||||||||||| |||| |||||||||| || ||||||||| ||||    
T  27626084 cttgtgagattgtttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaacttatttccataagctcttcatgatagcttaggaaa 27626183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 911 - 1012
Target Start/End: Complemental strand, 20526555 - 20526453
Alignment:
Q  911 ttgttagactgtttgagagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 1009  Q
    |||| ||||||||||||||||||||||||||||||| || ||| | ||| ||  ||||||| | || |||||||| || ||||||  |||||||||||||    
T  20526555 ttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgtttttagcttattttcattagttctccaaaatagcttatgaaa 20526456  T
Q  1010 aca 1012  Q
    |||    
T  20526455 aca 20526453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 903 - 1013
Target Start/End: Original strand, 25670540 - 25670650
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||| ||||| ||||||||||||| ||||||||||||||  | |||||||||| |||   |||||| | || ||||||| |||||||||| ||||  |    
T  25670540 ataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagatatgt 25670639  T
Q  1003 tatgaaaacaa 1013  Q
    ||| |||||||    
T  25670640 tataaaaacaa 25670650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 977 - 1080
Target Start/End: Complemental strand, 46945951 - 46945846
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatcc 1074  Q
    |||| |||||||||| | |||||||||| |||||||| ||||  ||||||||  ||||||  || || ||||||| |||||||||| ||||||||||| |    
T  46945951 atttccataagctcttcgggatagcttaagaaaacaaattatagattatacatgaacaatttgatttgattttatcttgtgttatacaaatagcttattc 46945852  T
Q  1075 ataagc 1080  Q
    ||||||    
T  46945851 ataagc 46945846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 977 - 1137
Target Start/End: Complemental strand, 48131390 - 48131231
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatcc 1074  Q
    |||||||||||||||||| ||||| | ||||||| |  |||    |||||| |||||| |  ||||| |||| ||||| | ||| |||| ||||| || |    
T  48131390 attttcataagctctccatgatagatcatgaaaatagcttaaaggttatactaaaacattttgactttatttcatgttttattacaaaactagctgatac 48131291  T
Q  1075 ataagcgcttatatgataagcacttcttatgatgtaagttgcaaattaagttatttatccaaa 1137  Q
    ||||||||||||||||||||||   |||||| |||||| |||||| |||||| | ||||||||    
T  48131290 ataagcgcttatatgataagca---cttatgctgtaagctgcaaaataagttgtgtatccaaa 48131231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 948 - 1012
Target Start/End: Complemental strand, 529446 - 529382
Alignment:
Q  948 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||| |||||||  ||||||| |||  |||||||||||||||||| |||||||||||||||||    
T  529446 atgacaagttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaaca 529382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 869 - 1013
Target Start/End: Original strand, 28691754 - 28691899
Alignment:
Q  869 ctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctg 966  Q
    |||||||||||||||||||||||  |||   ||   ||||||| |||| |||||||| | |||| ||||||||||||| | ||||| ||| ||||   ||    
T  28691754 ctgtttggattgacttatttgagtttatctgctaacataagcatttgtgagactgttcg-gagatcttatgaaaacagcttatgacttgtccataaattg 28691852  T
Q  967 ttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    || | |  | ||||||||||| |||||||||||||||||||||||||    
T  28691853 ttatcagtttattttcataagatctccaggatagcttatgaaaacaa 28691899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 971 - 1034
Target Start/End: Original strand, 39542322 - 39542385
Alignment:
Q  971 aaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaaca 1034  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| |||| | ||||||| |||||    
T  39542322 aaacttattttcataagctctccaggataacttatggaaacaacttatatcttatacataaaca 39542385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 965 - 1036
Target Start/End: Complemental strand, 44822013 - 44821942
Alignment:
Q  965 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat 1036  Q
    |||||| |||| ||||||||||| ||||||| ||||||||||||||||  ||||   |||||||||||||||    
T  44822013 tgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaat 44821942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 898 - 1032
Target Start/End: Complemental strand, 753090 - 752956
Alignment:
Q  898 cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccagga 997  Q
    |||| |||||||| | | |||||| |||| ||||||||||||||||||| ||||||| |  |||  ||||||| | || ||||||||| |||| ||| ||    
T  753090 cttgcataagcacctctaagactgattgaaagaacttatgaaaacagtttatgacatatcaataagctgtttttagctaattttcatatgctccccaaga 752991  T
Q  998 tagcttatgaaaacaagttatttattatacaaaaa 1032  Q
    ||| |||| ||||||  ||||   |||||||||||    
T  752990 tagtttatcaaaacagcttatagcttatacaaaaa 752956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 904 - 1005
Target Start/End: Original strand, 3836638 - 3836738
Alignment:
Q  904 taagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagctt 1003  Q
    ||||||||||| | |||||||| ||||||||||||||| || | ||||||| | ||||  | || || |||| |||||||| ||||||||| ||||||||    
T  3836638 taagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgacat-tacataagccgtcttcaacttattttcattagctctccaagatagctt 3836736  T
Q  1004 at 1005  Q
    ||    
T  3836737 at 3836738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 965 - 1010
Target Start/End: Complemental strand, 25596087 - 25596042
Alignment:
Q  965 tgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    |||||| |||| |||||||||||||||||| |||||||||||||||    
T  25596087 tgttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 1004
Target Start/End: Complemental strand, 33894743 - 33894642
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 1002  Q
    |||||||||||| |||||||||| |||| |||||||||||||   ||||||||| ||||   |||||| | || ||||  |||| || ||||||||||||    
T  33894743 ataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttcaataaactttccaggatagct 33894644  T
Q  1003 ta 1004  Q
    ||    
T  33894643 ta 33894642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 903 - 988
Target Start/End: Complemental strand, 44808274 - 44808189
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagc 988  Q
    ||||||| |||| ||||||||||| ||| |||||||||| |  | ||||||||| |||| |||||||| | || ||||||||||||    
T  44808274 ataagcagttgtcagactgtttgatagaccttatgaaaataacttatgacatgtccataacctgttttcagcttattttcataagc 44808189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 909 - 1101
Target Start/End: Original strand, 5628526 - 5628720
Alignment:
Q  909 acttgttagactgtttgagagaacttatg-aaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatga 1007  Q
    |||||| ||||| ||||||||| |||| | ||||||||| |||||||||  |||  |||||| |  || ||||||||||||||||   |||| |||||||    
T  5628526 acttgtgagactatttgagagatcttacggaaaacagtttatgacatgtctataagctgtttcag-cttattttcataagctctctgtgatatcttatga 5628624  T
Q  1008 aaacaagttatttattatacaaaaacaatg--acttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcacttct 1101  Q
    |||||  |||| | ||| |  |||||| |   |||  |||||||  | ||||||||||||||||||| ||||||| ||| |||||||||| |||||    
T  5628625 aaacagcttatatcttaaatgaaaacagttcaactctattttatcatttgttataaaaatagcttatgcataagcccttgtatgataagcccttct 5628720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 920 - 1012
Target Start/End: Complemental strand, 7244779 - 7244687
Alignment:
Q  920 tgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 1012  Q
    ||||||| ||| || ||| ||||| || |||||||| |||||   |||||| | || ||||||||||||||||||  ||||||||||||||||    
T  7244779 tgtttgaaagagctgatggaaacaatttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaaca 7244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 927 - 1018
Target Start/End: Complemental strand, 39968013 - 39967921
Alignment:
Q  927 gagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||||||||||||||||| | ||| ||| |||||||  ||||||| |||| |||||||| || ||||   |||||||||||||||||| ||||    
T  39968013 gagaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttat 39967921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 977 - 1013
Target Start/End: Original strand, 48917374 - 48917410
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaa 1013  Q
    |||||||||||||||||| ||||||||||||||||||    
T  48917374 attttcataagctctccaagatagcttatgaaaacaa 48917410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 977 - 1032
Target Start/End: Original strand, 3968785 - 3968840
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaa 1032  Q
    |||| ||||| ||||||||||||||||||||||| |  |||| |||||||||||||    
T  3968785 atttccataaactctccaggatagcttatgaaaatagcttatatattatacaaaaa 3968840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 903 - 994
Target Start/End: Original strand, 22387850 - 22387941
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctcca 994  Q
    |||| ||| ||| |||||||||| |||| ||||||||||||  | ||| |||||| |||  ||||||| |||| |||| |||||||||||||    
T  22387850 ataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataagctctcca 22387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 977 - 1012
Target Start/End: Original strand, 27378856 - 27378891
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaaca 1012  Q
    |||||||||||||||||||||||| |||||||||||    
T  27378856 attttcataagctctccaggatagtttatgaaaaca 27378891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1036 - 1095
Target Start/End: Complemental strand, 35536088 - 35536029
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagc 1095  Q
    |||||| ||||||| || ||||||| ||||||||||| |||||||  |||||||||||||    
T  35536088 tgactttattttatcttatgttatagaaatagcttatacataagcctttatatgataagc 35536029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1054 - 1093
Target Start/End: Complemental strand, 45078256 - 45078217
Alignment:
Q  1054 tgttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  45078256 tgttataaaaatagcttatacataagcacttatatgataa 45078217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 983 - 1090
Target Start/End: Original strand, 3610774 - 3610883
Alignment:
Q  983 ataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataagc 1080  Q
    |||||||||| ||||||| ||| |||||||| ||||   |||||| |||||| |  | ||| ||||||| || |||| || ||||||||||| |||||||    
T  3610774 ataagctctctaggatagtttacgaaaacaacttatagcttataccaaaacagtttgccttcattttatcttttgttgtagaaatagcttatacataagc 3610873  T
Q  1081 gcttatatga 1090  Q
     |||||||||    
T  3610874 acttatatga 3610883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1037 - 1099
Target Start/End: Complemental strand, 5373205 - 5373143
Alignment:
Q  1037 gacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcactt 1099  Q
    ||||| ||||||| || ||||||| ||||||| ||| ||||||| |||| |||||||||||||    
T  5373205 gactttattttatcttttgttatagaaatagcatatacataagcacttacatgataagcactt 5373143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 957
Target Start/End: Complemental strand, 8094422 - 8094368
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgtt 957  Q
    |||||||||||| ||||| |||||||||  |||||||||||| | ||||||||||    
T  8094422 ataagcacttgtgagactatttgagagattttatgaaaacagcttatgacatgtt 8094368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 875 - 944
Target Start/End: Original strand, 13960648 - 13960718
Alignment:
Q  875 ggattgacttatttgaggctattc-ttgtataagcacttgttagactgtttgagagaacttatgaaaacag 944  Q
    |||||||||||||||||  ||| | ||| |||||||||||  ||||| ||||||||| |||||||||||||    
T  13960648 ggattgacttatttgagcttatccattgcataagcacttgcgagactatttgagagagcttatgaaaacag 13960718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 928 - 986
Target Start/End: Original strand, 15740390 - 15740448
Alignment:
Q  928 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataa 986  Q
    ||||||||||||||||  | ||||||||||||||  ||||||| |||| ||||||||||    
T  15740390 agaacttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 15740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 977 - 1072
Target Start/End: Original strand, 17989051 - 17989148
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttat 1072  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||   |||||  ||||||   |||||| ||||||| || |||||||||| ||| ||||    
T  17989051 attttcataagctcttcaggagagcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttatattttgttataaaactagtttat 17989148  T

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Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1044 - 1094
Target Start/End: Original strand, 22388001 - 22388051
Alignment:
Q  1044 ttttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 1094  Q
    |||||| || ||||||| ||||||||||||||||||| |||| ||||||||    
T  22388001 ttttatcttttgttatagaaatagcttatccataagcacttaaatgataag 22388051  T

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Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 903 - 961
Target Start/End: Complemental strand, 36538024 - 36537966
Alignment:
Q  903 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 961  Q
    |||| ||||||| ||| |||||||||||||||||| |||||  | ||||||||||||||    
T  36538024 ataaacacttgtgagattgtttgagagaacttatggaaacaacttatgacatgttcata 36537966  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 988 - 1078
Target Start/End: Complemental strand, 1417295 - 1417203
Alignment:
Q  988 ctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataa 1078  Q
    ||||||| | |||||||||||||||| |||||  |||||  |||||||  |||||| ||||||| || ||||||| |||||| |||| |||||    
T  1417295 ctctccatgctagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataa 1417203  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 917 - 1010
Target Start/End: Original strand, 22551373 - 22551466
Alignment:
Q  917 gactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 1010  Q
    ||||||||||||||  || ||||||||| | |||||||||||| |   |||||| | || |||| ||||||||||||| |||  ||||||||||    
T  22551373 gactgtttgagagagattttgaaaacagcttatgacatgttcaaatgttgttttcagcttatttacataagctctccaagattacttatgaaaa 22551466  T

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Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 977 - 1018
Target Start/End: Original strand, 24363629 - 24363670
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    |||| ||||| |||||||||||||||||||||||||| ||||    
T  24363629 atttccataacctctccaggatagcttatgaaaacaacttat 24363670  T

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Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 977 - 1010
Target Start/End: Original strand, 30723067 - 30723100
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaa 1010  Q
    ||||||| ||||||||||||||||||||||||||    
T  30723067 attttcaaaagctctccaggatagcttatgaaaa 30723100  T

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Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1036 - 1093
Target Start/End: Original strand, 45593808 - 45593865
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 1093  Q
    |||||| |||||||||| ||||| | ||||||||||| |||||||  |||||||||||    
T  45593808 tgactttattttatgttttgttacagaaatagcttatacataagcatttatatgataa 45593865  T

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Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 977 - 1018
Target Start/End: Original strand, 46104595 - 46104636
Alignment:
Q  977 attttcataagctctccaggatagcttatgaaaacaagttat 1018  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||    
T  46104595 attttcataagctcttcagcatagcttatgaaaacaacttat 46104636  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1043 - 1095
Target Start/End: Original strand, 143157 - 143209
Alignment:
Q  1043 attttatgttgtgttataaaaatagcttatccataagcgcttatatgataagc 1095  Q
    ||||||| |||||||||| |||||||| || ||||||||||||||||||||||    
T  143157 attttatcttgtgttatagaaatagctaattcataagcgcttatatgataagc 143209  T

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Target: scaffold0590 (Bit Score: 33; Significance: 0.000000009; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1036 - 1092
Target Start/End: Original strand, 1163 - 1219
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgata 1092  Q
    |||||| ||||||| || ||||||| ||||||||||| ||||||| |||||||||||    
T  1163 tgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 1219  T

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Target: scaffold0508 (Bit Score: 33; Significance: 0.000000009; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1036 - 1096
Target Start/End: Original strand, 9864 - 9924
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagca 1096  Q
    |||||||||||||| || ||||||| ||||| ||||| ||||||| | |||||||||||||    
T  9864 tgacttaattttattttttgttatagaaataacttatacataagcacctatatgataagca 9924  T

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Target: scaffold0275 (Bit Score: 33; Significance: 0.000000009; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1036 - 1092
Target Start/End: Complemental strand, 2812 - 2756
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgata 1092  Q
    |||||| ||||||| || ||||||| ||||||||||| ||||||| |||||||||||    
T  2812 tgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 2756  T

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Target: scaffold0654 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1094
Target Start/End: Original strand, 6726 - 6784
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 1094  Q
    |||||||| ||||| || ||||||| |||||| |||| ||||||| |||||||||||||    
T  6726 tgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataag 6784  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1094
Target Start/End: Original strand, 116645 - 116703
Alignment:
Q  1036 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 1094  Q
    |||||||| ||||| || ||||||| |||||| |||| ||||||| |||||||||||||    
T  116645 tgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataag 116703  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 918 - 983
Target Start/End: Original strand, 9606 - 9671
Alignment:
Q  918 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttca 983  Q
    ||||||||||||||||||||||||||  | || |||||||||||  ||||||| | || |||||||    
T  9606 actgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattttca 9671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 932 - 1013
Target Start/End: Complemental strand, 306413 - 306332
Alignment:
Q  932 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 1013  Q
    |||||| |||||| | ||||||||  ||||  ||||||| | || | || ||||||||||| ||||||||||||||||||||    
T  306413 cttatggaaacagcttatgacatgcccataagctgttttcagcttacttacataagctctctaggatagcttatgaaaacaa 306332  T

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