View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4871-Insertion-2 (Length: 1070)
Name: NF4871-Insertion-2
Description: NF4871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4871-Insertion-2 |
 | |
|
| [»] chr7 (16 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 839; Significance: 0; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 839; E-Value: 0
Query Start/End: Original strand, 7 - 1070
Target Start/End: Original strand, 12581482 - 12582552
Alignment:
| Q |
7 |
aaaatggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12581482 |
aaaatggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgcaaactgttttggctagcataaataaggatt |
12581581 |
T |
|
| Q |
107 |
taactttatttaagaaaacaattattgatctgtcaaaatatcttgttggtgataatgcaaactggcaaccacaacccatgttgatcaaccacatataaca |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12581582 |
taactttatttaagaaaacaattattgatctgtcaaaatatcttgttggtgataatgcaaactggcaaccacaacccatgttgatcaaccacatataaca |
12581681 |
T |
|
| Q |
207 |
tttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattaggctcatctgtcaatgattttctttaacgtccatatgtc |
306 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
12581682 |
tatattgttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattaggctcaactgccaatgattttctttaacgtccatatgtc |
12581781 |
T |
|
| Q |
307 |
agatatgttgagaagttgggaatttttcattttctatttgttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtt |
406 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
12581782 |
agatatgttgagaagttggaaatttttcattttctatttgttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatacagtt |
12581881 |
T |
|
| Q |
407 |
tctatgcaatttggaattgatcaagatgtttcaagttatgtgggctatgttcagcgatacaaagtatatttcttggaaaaactactctaggcccatgtct |
506 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12581882 |
tttatgcaatttggaattgatcaagatgtttcaagttatgtgggctaggttcagcgatacaaagtatatttcttggaaaaactactctaggcccatgtct |
12581981 |
T |
|
| Q |
507 |
gacnnnnnnntttattttccatcaaagttgttcaaggcagatgttaccatgcattatgtaaagtggtggaagcaattggtgttaggtcatggagatttca |
606 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12581982 |
gaaaaaaaaaattattttccatcaaagttgttcaaggcagatgttaccatgcattatgcaaagtggtggaagcaattggtgttaggtcatggagatttca |
12582081 |
T |
|
| Q |
607 |
ttatgaagattgtgaagcggaagaaaggtgtgaattcaaggaaatgtaaaactcgtgtaggaaaagctaacaaaagcggtattcatgttggtggtcagcc |
706 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12582082 |
ttatgaagattgtgaagcggaagagaggtgtgaattcaaggaaatgtaaaactcgtgtaggaaaagctaacaaaagcggtattcatgttggtggtcagcc |
12582181 |
T |
|
| Q |
707 |
tagatttcgtcccaatcttgaggatactcttgcctttagaannnnnnnctgatgttcctactgaaaattttgtacatgattgtgcaaaagttgaagaaaa |
806 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12582182 |
tagatttcgtcccaatcttgaggatactcttggctttagaatttttttctgatgttcctactgaaaattttgcacatgattgtgcaaaagttgaagaaaa |
12582281 |
T |
|
| Q |
807 |
tatt-atgcttcttccatatcaattggaattgtaatcctgtggaagagtccaacaatgtaatttgtttacaacaagaacnnnnnnnnnnnnnnnnnnaat |
905 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
12582282 |
tattgatgcttcttccatatctattggaattgtaatcctgtgaaagagtccaacaatgtaatttgtttacaacaataacttttttattgttatttttaat |
12582381 |
T |
|
| Q |
906 |
cctctgtaagtataatatatctatagcaaacaaaatgatgcaggatttcataccagtaatagaaaaaagcatcg-aaagtccttatgatatgatgtattt |
1004 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
12582382 |
cctctgtaagtataatatatctatagcaaacaaaatgatgcaggatttcataccagtaatagaaaaaagcatcgaaaagtccttatgatatgatgtattt |
12582481 |
T |
|
| Q |
1005 |
cat-atgcac-aagagcaaataattg-aaagt-caacgtgacgacctttattatctatcc-gatgagtctg |
1070 |
Q |
| |
|
||| |||||| ||||||||||||||| ||||| ||||||||| | ||||||||||||||| |||||||||| |
|
|
| T |
12582482 |
cataatgcacaaagagcaaataattgaaaagtccaacgtgacaaactttattatctatccagatgagtctg |
12582552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 163 - 869
Target Start/End: Original strand, 12521388 - 12522099
Alignment:
| Q |
163 |
gcaaactggcaaccacaacccatgttgatcaaccacatataacatttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtg |
262 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12521388 |
gcaaacttgcaaccacaactcatgttgatcaaccacatagaacatttattgttgaggtggcataaggttctggccttgaaaattggcaatgttaagtgtg |
12521487 |
T |
|
| Q |
263 |
cattaggctcatctgtcaatgattttctttaacgtccatatgtcagatatgttgagaagttgggaatttttcattttctatttgttgagagtttctaagc |
362 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
12521488 |
cattaggctcaactgtcaatgattttctttaacgtccatatgtcagatatgttgagaaatatggaatttttcattttctatttgttgaaagtttctaagc |
12521587 |
T |
|
| Q |
363 |
ttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatgtgggctatgttcagcg |
462 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||| | |
|
|
| T |
12521588 |
ttattggatttgagtatattgagctatgtcttccgcatagagtttgtatgcaatttggaattgattaagatgtttcaagttatgtgggctaggttcaaca |
12521687 |
T |
|
| Q |
463 |
atacaaagtatatttcttgg-aaaaactactctaggcccatgtctgacnnnnnnntttattttccatcaaagttgttcaaggcagatgttaccatgcatt |
561 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| ||| ||||| ||| |||||| |||||||||| |
|
|
| T |
12521688 |
atacaaagtatatttcttggaaaaaactactctaggcccatgtctgataaaaatttgtattttccaccaagtctgttctaggtagatgtgaccatgcatt |
12521787 |
T |
|
| Q |
562 |
atgtaaagtggtggaagcaattggtgttaggtcatggagatttcattatgaagattgtgaagcggaagaaaggtgtgaattcaaggaaatgtaaaactcg |
661 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||||||||||| |
|
|
| T |
12521788 |
atgtaaagtggtggaagcaattggtgttaggtcatagagatttcattatgaagattgtgaagcagaagagaggtatgaattaaaggaaatgtaaaactcg |
12521887 |
T |
|
| Q |
662 |
tgtaggaaaagctaacaaaagcggtattcatgttggtggtcagcctagatttcgtcccaatcttgaggatactcttgcctttagaa--nnnnnnnctgat |
759 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |
|
|
| T |
12521888 |
tgtaggaaaagctaacaaaagcggtattcatgttggtggtcagcctagatttcgtctcaatcttgaggatactcttgcctttataatttttttttctgac |
12521987 |
T |
|
| Q |
760 |
gttcctactgaaaattttgtacatgattgtgcaaaagttgaagaaaatatt-atgcttcttccatatcaattg-gaattgtaatcctgtggaagagtcca |
857 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| |||| | |||||||||||||| ||||||||| |
|
|
| T |
12521988 |
gttcctactgaaaattctgcacatgattgtgcaaaagttgaagaaaatattgatgcttcttccatatctattgaggattgtaatcctgtgaaagagtcca |
12522087 |
T |
|
| Q |
858 |
acaatgtaattt |
869 |
Q |
| |
|
|||||||||||| |
|
|
| T |
12522088 |
acaatgtaattt |
12522099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 163 - 868
Target Start/End: Original strand, 12497523 - 12498233
Alignment:
| Q |
163 |
gcaaactggcaaccacaacccatgttgatcaaccacatataacatttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtg |
262 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12497523 |
gcaaacttgcaaccacaactcatgttgatcaaccacatagaacatttattgttgaggtggcataaggttctggccttgaaaattggcaatgttaagtgtg |
12497622 |
T |
|
| Q |
263 |
cattaggctcatctgtcaatgattttctttaacgtccatatgtcagatatgttgagaagttgggaatttttcattttctatttgttgagagtttctaagc |
362 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
12497623 |
cattaggctcaactgtcaatgattttctttaacgtccatatgtcagatatgttgagaaatatggaatttttcattttctatttgttgaaagtttctaagc |
12497722 |
T |
|
| Q |
363 |
ttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatgtgggctatgttcagcg |
462 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||| | |
|
|
| T |
12497723 |
ttattggatttgagtatattgagctatgtcttccgcatagagtttgtatgcaatttggaattgattaagatgtttcaagttatgtgggctaggttcaaca |
12497822 |
T |
|
| Q |
463 |
atacaaagtatatttcttgg-aaaaactactctaggcccatgtctgacnnnnnnntttattttccatcaaagttgttcaaggcagatgttaccatgcatt |
561 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| ||| ||||| ||| |||||| |||||||||| |
|
|
| T |
12497823 |
atacaaagtatatttcttggaaaaaactactctaggcccatgtctgataaaaatttgtattttccaccaagtctgttctaggtagatgtgaccatgcatt |
12497922 |
T |
|
| Q |
562 |
atgtaaagtggtggaagcaattggtgttaggtcatggagatttcattatgaagattgtgaagcggaagaaaggtgtgaattcaaggaaatgtaaaactcg |
661 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||| |||| |
|
|
| T |
12497923 |
atgtaaagtggtggaagcaattggtgttaggtcatagagatttcattatgaagattgtgaagcagaagagaggtatgaattaaaggaaatgtaaagctcg |
12498022 |
T |
|
| Q |
662 |
tgtaggaaaagctaacaaaagcggtattcatgttggtggtcagcctagatttcgtcccaatcttgaggatactcttgcctttagaa--nnnnnnnctgat |
759 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
12498023 |
tgtaggaaaagatagcaaaagcggtattcatgttggtggtcagcctagatttcgtctcaatcttgaggatactcttgcctttagaatttttttttctgac |
12498122 |
T |
|
| Q |
760 |
gttcctactgaaaattttgtacatgattgtgcaaaagttgaagaaaatatt-atgcttcttccatatcaattg-gaattgtaatcctgtggaagagtcca |
857 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| |||| | |||||||||||||| ||||||||| |
|
|
| T |
12498123 |
gttcctactgaaaattctgcacatgattgtgcaaaagttgaagaaaatattgatgcttcttccatatctattgaggattgtaatcctgtgaaagagtcca |
12498222 |
T |
|
| Q |
858 |
acaatgtaatt |
868 |
Q |
| |
|
||||||||||| |
|
|
| T |
12498223 |
acaatgtaatt |
12498233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 335 - 747
Target Start/End: Complemental strand, 12495561 - 12495149
Alignment:
| Q |
335 |
attttctatttg-ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagat |
433 |
Q |
| |
|
||||||||| || ||||||| || | ||||| |||||||| || |||||||| || ||||| ||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
12495561 |
attttctatatgcttgagagattttgagcttgttggatttaagcgtatagagcaatatcttctacatagagtgtctatacaatttggaattgaccaagat |
12495462 |
T |
|
| Q |
434 |
gtttcaagttatgtgggctatgttcagcgatacaaagtatatttcttggaaaaactactctaggcccatgtctgacnnnnnnntttattttccatcaaag |
533 |
Q |
| |
|
|||| |||||||| | ||| ||| | ||||| |||||||||| ||| ||||||||| ||||||| ||||||| | | |||||| || || |
|
|
| T |
12495461 |
atttcgagttatgtag-ctaggttaaacgatagaaagtatattgcttcgaaaaactattctaggctcatgtctaataaaaatttgtattttgcaccatga |
12495363 |
T |
|
| Q |
534 |
ttgttcaaggcagatgttaccatgcattatgtaaagtggtggaagcaattggtgttaggtcatggagatttcattatgaagattgtgaagcggaagaaag |
633 |
Q |
| |
|
|||| |||||||| ||||||||| ||||||||||| ||||||||||| | |||| |||||||||||||| ||| |||||||||||||| ||||| | |
|
|
| T |
12495362 |
ctgtttgaggcagatattaccatgcgttatgtaaagttgtggaagcaatcgatgttgggtcatggagattttgttaagaagattgtgaagcagaagagaa |
12495263 |
T |
|
| Q |
634 |
gtgtgaattcaaggaaatgtaaaactcgtgtaggaaaagctaacaaaagcggtattcatgttggtggtcagcctagatttcgtcccaatcttgaggatac |
733 |
Q |
| |
|
|| ||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| |||||| ||||||||||| ||||||||||||| |
|
|
| T |
12495262 |
gtttgagctcaaggaaatgtaaaactcgtgtaggaaaagctaacaaaaatggtatttatgtgtgtggccagcctggatttcgtccccatcttgaggatac |
12495163 |
T |
|
| Q |
734 |
tcttgcctttagaa |
747 |
Q |
| |
|
|| | ||||||||| |
|
|
| T |
12495162 |
tccttcctttagaa |
12495149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 7 - 162
Target Start/End: Original strand, 12497299 - 12497454
Alignment:
| Q |
7 |
aaaatggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatt |
106 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
12497299 |
aaaatggtgataagttatttgttttctattgctattaatcttgctagaagaaatcaaattactttgccgccagctgttttggctagcataaataacgatt |
12497398 |
T |
|
| Q |
107 |
taactttatttaagaaaacaattattgatctgtcaaaatatcttgttggtgataat |
162 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
12497399 |
taactttatttaagaaaacaattattgatctgtcaaaacatcttattggtgataat |
12497454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 7 - 162
Target Start/End: Original strand, 12521164 - 12521319
Alignment:
| Q |
7 |
aaaatggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatt |
106 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
12521164 |
aaaatggtgataagttatttgttttctattgctattaatcttgctagaagaaatcaaattactttgccgccagctgttttggctagcataaataacgatt |
12521263 |
T |
|
| Q |
107 |
taactttatttaagaaaacaattattgatctgtcaaaatatcttgttggtgataat |
162 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
12521264 |
taactttatttaagaaaacaattattgatctgtcaaaacatcttattggtgataat |
12521319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 335 - 735
Target Start/End: Complemental strand, 12579658 - 12579258
Alignment:
| Q |
335 |
attttctatttg-ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagat |
433 |
Q |
| |
|
||||||||| || ||||||| || | ||||| |||||||| || |||||||| || ||||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
12579658 |
attttctatatgcttgagagattttgagcttgttggatttaagcctatagagcaatatcttcgacatagagtgtctatacaatttggaattgaccaagat |
12579559 |
T |
|
| Q |
434 |
gtttcaagttatgtgggctatgttcagcgatacaaagtatatttcttggaaaaactactctaggcccatgtctgacnnnnnnntttattttccatcaaag |
533 |
Q |
| |
|
||||||||||||| ||| ||| | ||||| |||||||||| ||| |||||||| ||||||| ||||||| | | |||||| || || |
|
|
| T |
12579558 |
atttcaagttatgtaa-ctaggttaaacgatagaaagtatattgcttcaaaaaactattctaggctcatgtctaataaaaatttgtattttgcaccatga |
12579460 |
T |
|
| Q |
534 |
ttgttcaaggcagatgttaccatgcattatgtaaagtggtggaagcaattggtgttaggtcatggagatttcattatgaagattgtgaagcggaagaaag |
633 |
Q |
| |
|
|||| |||||||| ||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||| ||| |||||||||||||| ||||| | |
|
|
| T |
12579459 |
ctgtttgaggcagatattaccatgcgttatgtaaagtggtggaagcaatcaatgttgggtcatgaagatttcgttaagaagattgtgaagcagaagagaa |
12579360 |
T |
|
| Q |
634 |
gtgtgaattcaaggaaatgtaaaactcgtgtaggaaaagctaacaaaagcggtattcatgttggtggtcagcctagatttcgtcccaatcttgaggatac |
733 |
Q |
| |
|
|| ||| ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||| |||||| ||||| ||||| ||||||||||||| |
|
|
| T |
12579359 |
gtttgagctcaaggaaatgtaaaactcatgtaggaaaagctaacaaaaacggtatttatgtttgtgaccagcctggattttgtccctatcttgaggatac |
12579260 |
T |
|
| Q |
734 |
tc |
735 |
Q |
| |
|
|| |
|
|
| T |
12579259 |
tc |
12579258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 391 - 747
Target Start/End: Complemental strand, 12519308 - 12518953
Alignment:
| Q |
391 |
tcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatgtgggctatgttcagcgatacaaagtatatttcttggaaaaacta |
490 |
Q |
| |
|
||||| ||||||||| ||||| ||||||| |||||| ||| || |||| |||||||| | ||| ||| | ||||| |||||||||| ||| ||||||||| |
|
|
| T |
12519308 |
tcttccacatagagtgtctattcaatttgaaattgaccaaaatatttcgagttatgtag-ctaggttaaacgatagaaagtatattgcttcgaaaaacta |
12519210 |
T |
|
| Q |
491 |
ctctaggcccatgtctgacnnnnnnntttattttccatcaaagttgttcaaggcagatgttaccatgcattatgtaaagtggtggaagcaattggtgtta |
590 |
Q |
| |
|
||||||| ||||||| | | |||||| || || |||| ||||||| ||||||||| ||||||||||||||||||||||| | |||| |
|
|
| T |
12519209 |
ttctaggctcatgtctaataaaaatttgtattttgcaccatgactgtttgaggcagaaattaccatgcgttatgtaaagtggtggaagcaatcgatgttg |
12519110 |
T |
|
| Q |
591 |
ggtcatggagatttcattatgaagattgtgaagcggaagaaaggtgtgaattcaaggaaatgtaaaactcgtgtaggaaaagctaacaaaagcggtattc |
690 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||| ||||| | || ||| |||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
12519109 |
ggtcatggagattttgttaagaagattgtgaagcagaagagaagtttgagctcaaggaaatgtaaaactcgtgtaggcaaagctaacaaaaacggtattt |
12519010 |
T |
|
| Q |
691 |
atgttggtggtcagcctagatttcgtcccaatcttgaggatactcttgcctttagaa |
747 |
Q |
| |
|
|||| |||| |||||| ||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
12519009 |
atgtgtgtggccagcctggatttcgtccccatcttgaggatactccttcctttagaa |
12518953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 7 - 159
Target Start/End: Complemental strand, 12580110 - 12579963
Alignment:
| Q |
7 |
aaaatggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatt |
106 |
Q |
| |
|
|||||||||| ||||| |||||||||| ||| | ||||||||||||||||||||| |||| ||||| | ||| |||||||||||||||||||||||||| |
|
|
| T |
12580110 |
aaaatggtgacaagttgtttgttttctgttggtgttaatcttgctagaagaaatccaatttctttggtggcaattgttttggctagcataaataaggatt |
12580011 |
T |
|
| Q |
107 |
taactttatttaagaaaacaattattgatctgtcaaaatatcttgttggtgat |
159 |
Q |
| |
|
|||| ||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
12580010 |
taacattatttaagaaaaaaa-----aatctgtcaaaatatcttgttggtgat |
12579963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 920 - 1059
Target Start/End: Original strand, 12498297 - 12498442
Alignment:
| Q |
920 |
atatatctatagcaaacaaaatgatgcaggatttcataccagtaatagaaaaaagcatcg-aaagtc-cttatgatatgatgtatttcat-atgcac-aa |
1015 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||| | |||||||||||||||||||| | |||| || |
|
|
| T |
12498297 |
atatatatatagcaaacaaaatgatgcaggattttataccagtaatagaaaaaagcatggaaaagtctcgtatgatatgatgtatttcataaggcacaaa |
12498396 |
T |
|
| Q |
1016 |
gagcaaataattg-aaagt-caacgtgacgacctttattatctatc |
1059 |
Q |
| |
|
||| ||||||| | ||||| ||||||||||| |||||| ||||||| |
|
|
| T |
12498397 |
gagaaaataatagaaaagtccaacgtgacgaactttatcatctatc |
12498442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 12519821 - 12519704
Alignment:
| Q |
7 |
aaaatggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatt |
106 |
Q |
| |
|
|||||||||| || || |||||||||| ||| | ||||||||||||||||||||| |||| ||||| | || |||||||||||||||||||||||| | |
|
|
| T |
12519821 |
aaaatggtgacaaattgtttgttttctgttggtgttaatcttgctagaagaaatccaattgctttggtggcagttgttttggctagcataaataaggact |
12519722 |
T |
|
| Q |
107 |
taactttatttaagaaaa |
124 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
12519721 |
taactttatttaagaaaa |
12519704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 920 - 1059
Target Start/End: Original strand, 12522133 - 12522278
Alignment:
| Q |
920 |
atatatctatagcaaacaaaatgatgcaggatttcataccagtaatagaaaaaagcatcg-aaagt-ccttatgatatgatgtatttcat-atgcac-aa |
1015 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||| | ||||| ||||||||||||||||||||||| | |||| || |
|
|
| T |
12522133 |
atatatatatagcaaacaaaatgatgcaggattttatatcagtaatagaaaaaagcatggaaaagtcccttatgatatgatgtatttcataaggcacaaa |
12522232 |
T |
|
| Q |
1016 |
gagcaaataattg-aaagt-caacgtgacgacctttattatctatc |
1059 |
Q |
| |
|
||| ||||||| | ||||| ||||||||||| |||||| ||||||| |
|
|
| T |
12522233 |
gagaaaataatagaaaagtccaacgtgacgaactttatcatctatc |
12522278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 47 - 159
Target Start/End: Complemental strand, 12495972 - 12495867
Alignment:
| Q |
47 |
ttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaactttatttaagaaaacaattattgatctgtcaaaata |
146 |
Q |
| |
|
||||||||||||||| |||| ||||| | || ||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |
|
|
| T |
12495972 |
ttgctagaagaaatccaattgctttggtggcagttgttttggctagcataaataaggatttaactttatttaataaaaaa-------atctgtcaaaata |
12495880 |
T |
|
| Q |
147 |
tcttgttggtgat |
159 |
Q |
| |
|
||||||||||||| |
|
|
| T |
12495879 |
tcttgttggtgat |
12495867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 180 - 333
Target Start/End: Complemental strand, 12495778 - 12495625
Alignment:
| Q |
180 |
acccatgttgatcaaccacatataacatttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattaggctcatctgtc |
279 |
Q |
| |
|
||||||||| |||||||||||| | | |||||| | |||| | ||||||||| ||||||| ||||| ||||||| ||| |||||||| |||| |||| |
|
|
| T |
12495778 |
acccatgttcatcaaccacatagaccctttattgcttaggttgaataaggttcaggccttgcaaattgacaatgttcagtttgcattagactcaagtgtc |
12495679 |
T |
|
| Q |
280 |
aatgattttctttaacgtccatatgtcagatatgttgagaagttgggaattttt |
333 |
Q |
| |
|
||||||||||||| |||||||||| |||||| |||||||| ||||||||| |
|
|
| T |
12495678 |
aatgattttctttggcgtccatatgctagatatcctgagaagtgtggaattttt |
12495625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 12579874 - 12579750
Alignment:
| Q |
180 |
acccatgttgatcaaccacatataacatttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattaggctcatctgtc |
279 |
Q |
| |
|
|||||| |||||||||| |||| | | |||||| | |||| | ||||||||| ||||||| ||||| ||||||||||| |||||||| |||| ||| |
|
|
| T |
12579874 |
acccatattgatcaaccgcatagaccctttattgcttaggttgaataaggttcaggccttgcaaattgacaatgttaagtttgcattagactcaagtgtt |
12579775 |
T |
|
| Q |
280 |
aatgattttctttaacgtccatatg |
304 |
Q |
| |
|
||||||||||||| ||||||||||| |
|
|
| T |
12579774 |
aatgattttctttgacgtccatatg |
12579750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 12519535 - 12519427
Alignment:
| Q |
224 |
ataaggttctggccttgaaaattagcaatgttaagtgtgcattaggctcatctgtcaatgattttctttaacgtccatatgtcagatatgttgagaagtt |
323 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||| |||||||| |||| ||||||||||||||||| |||||||||| |||||| |||||||| |
|
|
| T |
12519535 |
ataaggttcaggccttgcaaattgacaatgttaagtttgcattagactcaagtgtcaatgattttcttt-gcgtccatatgctagatatcctgagaagtg |
12519437 |
T |
|
| Q |
324 |
gggaattttt |
333 |
Q |
| |
|
||||||||| |
|
|
| T |
12519436 |
tggaattttt |
12519427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 126; Significance: 2e-64; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 360 - 689
Target Start/End: Complemental strand, 6397323 - 6396997
Alignment:
| Q |
360 |
agcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatgtgggctatgttca |
459 |
Q |
| |
|
||||| |||||||||||| |||||||| || ||||| ||| || |||||||||||||| ||||| || ||||||| |||||||||| ||| ||| | |
|
|
| T |
6397323 |
agcttgttggatttgagtctatagagcaatatcttccacaaag--tttctatgcaatttcaaattggccacgatgtttggagttatgtgg-ctaggttta |
6397227 |
T |
|
| Q |
460 |
gcgatacaaagtatatttcttggaaaaactactctaggcccatgtctgacnnnnnnntttattttccatcaaagttgttcaaggcagatgttaccatgca |
559 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||| ||| |||| |||| |||||||| ||||| |
|
|
| T |
6397226 |
actatacaaagtatatttcttggaaaaactactctaggcctatgtctgataaaaatttgtattttccaccaagactgtttgaggctgatgttactatgca |
6397127 |
T |
|
| Q |
560 |
ttatgtaaagtggtggaagcaattggtgttaggtcatggagatttcattatgaagattgtgaagcggaagaaaggtgtgaattcaaggaaatgtaaaact |
659 |
Q |
| |
|
||||| |||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||||||||||| | |||||| || |||||||||||||||| |
|
|
| T |
6397126 |
ttatgcaaagtggtagaagcaatcggtgttaggtcatggagattttgttaagaagattgtgaagcggaagagaagtgtgattttaaggaaatgtaaaact |
6397027 |
T |
|
| Q |
660 |
cgtgtaggaaaagctaacaaaagcggtatt |
689 |
Q |
| |
|
||||| |||||||||||||||| |||||| |
|
|
| T |
6397026 |
cgtgttagaaaagctaacaaaagtggtatt |
6396997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 7 - 159
Target Start/End: Complemental strand, 6397766 - 6397612
Alignment:
| Q |
7 |
aaaatggtgaaaagttat--ttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataagga |
104 |
Q |
| |
|
|||||||||||||||| | ||| |||||||| | |||||||||||||| ||||| |||| ||||| | ||| |||||||||||| |||| ||||||| |
|
|
| T |
6397766 |
aaaatggtgaaaagttttgtttgctttctattaatgttaatcttgctagagaaaatccaattgctttggcaccatctgttttggctatcatatataagga |
6397667 |
T |
|
| Q |
105 |
tttaactttatttaagaaaacaattattgatctgtcaaaatatcttgttggtgat |
159 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
6397666 |
tttatctttatttaagaaaacaattattgatttgtcgaaatatcttgttggtgat |
6397612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 6398353 - 6398506
Alignment:
| Q |
9 |
aatggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagc--ataaataaggatt |
106 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||| |||||| |||||| ||| |||| | ||| ||||||| |||||| ||| ||||||||| |
|
|
| T |
6398353 |
aatggtgaaaagttgtttgttttctattgctgttaatctcgctagaggaaatccaatcggtttggcaccagctgttttagctagcatatatataaggatt |
6398452 |
T |
|
| Q |
107 |
taactttatttaag-aaaacaattattgatctgtcaaaatatcttgttggtgat |
159 |
Q |
| |
|
|||||||||||||| |||| |||||||||| |||||||||||| ||||| |||| |
|
|
| T |
6398453 |
taactttatttaagaaaaaaaattattgatatgtcaaaatatcatgttgatgat |
6398506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 176 - 322
Target Start/End: Complemental strand, 6397526 - 6397380
Alignment:
| Q |
176 |
cacaacccatgttgatcaaccacatataacatttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattaggctcatc |
275 |
Q |
| |
|
||||||| |||||||| | ||||||| | | ||||||||| |||||| ||||||||| |||||| |||||| |||| |||||| |||| || |||| | |
|
|
| T |
6397526 |
cacaacctatgttgattacccacatagaccctttattttttaggtggtataaggttcaggcctttaaaattgacaatattaagttggcatgagactcaac |
6397427 |
T |
|
| Q |
276 |
tgtcaatgattttctttaacgtccatatgtcagatatgttgagaagt |
322 |
Q |
| |
|
|||| || ||||||||| ||||||||||| |||||| |||||||| |
|
|
| T |
6397426 |
tgtcgataattttctttggcgtccatatgttagatatcctgagaagt |
6397380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 331 - 449
Target Start/End: Original strand, 6398977 - 6399096
Alignment:
| Q |
331 |
tttcattttctatttgtt-gagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatca |
429 |
Q |
| |
|
||||||||||||| |||| |||||||| | ||||| ||||| |||||| |||| || || || || || ||||||||||||||| ||||||||||| || |
|
|
| T |
6398977 |
tttcattttctatatgtttgagagtttatgagcttgttggaattgagtctataaagaaatatcatctacgtagagtttctatgcagtttggaattgacca |
6399076 |
T |
|
| Q |
430 |
agatgtttcaagttatgtgg |
449 |
Q |
| |
|
|||| |||| |||||||||| |
|
|
| T |
6399077 |
agatctttcgagttatgtgg |
6399096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 101; Significance: 2e-49; HSPs: 39)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 331 - 647
Target Start/End: Original strand, 20046664 - 20046980
Alignment:
| Q |
331 |
tttcattttctatttgt-tgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatca |
429 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||| |||||||||||| |||||||| | ||||| ||||||||||||||||||||||||| |||| || |
|
|
| T |
20046664 |
tttcattttctatatgcctgagagtttctgagcttgttggatttgagtctatagagcagtatcttccacatagagtttctatgcaatttggacttgacca |
20046763 |
T |
|
| Q |
430 |
agatgtttcaagttatgtgggctatgttcagcgatacaaagtatatttcttggaaaaactactctaggcccatgtctgacnnnnnnntttattttccatc |
529 |
Q |
| |
|
||||||| | ||||||||| | | || || | ||| ||||| || | ||||||| ||||||| |||||||||||||| | ||||||||| | |
|
|
| T |
20046764 |
agatgttccgagttatgtgc-caaggtgcaacaatagaaagtctactgcttggaacaactactgcaggcccatgtctgataaaaatttgtattttccacc |
20046862 |
T |
|
| Q |
530 |
aaagttgttcaaggcagatgttaccatgcattatgtaaagtggtggaagcaattggtgttaggtcatggagatttcattatgaagattgtgaagcggaag |
629 |
Q |
| |
|
|| ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| |||| |||||||||| || ||| |||||||| ||||| |
|
|
| T |
20046863 |
aagattgtttgaggcagatgttaccatgcgttatgtaaagtggtggaagcaatcggtgttgggtcgtggagatttcgttgagaaaattgtgaatcggaat |
20046962 |
T |
|
| Q |
630 |
aaaggtgtgaattcaagg |
647 |
Q |
| |
|
| | |||||||||||||| |
|
|
| T |
20046963 |
agaagtgtgaattcaagg |
20046980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 347 - 682
Target Start/End: Original strand, 26653709 - 26654043
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatg |
446 |
Q |
| |
|
||||||||| || |||| |||||||||||| ||| |||| || ||||| |||||||||| ||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
26653709 |
ttgagagttgctgagctagttggatttgagtctattgagcaatatcttccacatagagttgctatgcaatttggaattgaccaagatgttccaagttatg |
26653808 |
T |
|
| Q |
447 |
tgggctatgttcagcgatacaaagtatatttcttggaaaaactactctaggcccatgtctgacnnnnnnntttattttccatcaaagttgttcaaggcag |
546 |
Q |
| |
|
||| ||| ||||| || || || || ||| ||||| ||||||||| ||||| || ||| | | ||||||||| ||| |||||| |||||| |
|
|
| T |
26653809 |
tgg-ctaggttcaatgagactaaatacattgcttgggaaaactactgcaggcctatttcttataaaaatttgtattttccaccaaggttgtttgaggcag |
26653907 |
T |
|
| Q |
547 |
atgttaccatgcattatgtaaagtggtggaagcaattggtgttaggtcatggagatttcattatgaagattgtgaagcggaagaaaggtgtgaattcaag |
646 |
Q |
| |
|
|||| | ||||| ||||| |||||||||||||||| |||| || |||||||||||||| ||| ||| |||||||| ||||||| | |||||| |||||| |
|
|
| T |
26653908 |
atgtcatcatgcgttatgcaaagtggtggaagcaactggtattgggtcatggagattttgttaagaacattgtgaaacggaagagaagtgtgagttcaag |
26654007 |
T |
|
| Q |
647 |
gaaatgtaaaactcgtgtaggaaaagctaacaaaag |
682 |
Q |
| |
|
|||| || | ||| |||||| ||||||| |||||| |
|
|
| T |
26654008 |
gaaacctagagctcatgtagggaaagctagcaaaag |
26654043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 10 - 157
Target Start/End: Original strand, 20046216 - 20046363
Alignment:
| Q |
10 |
atggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaa |
109 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||| |||||| |||| ||||| | || ||||||||| ||||||| |||||||||||| |
|
|
| T |
20046216 |
atggtgaaaaattgtttgttttctattgctattaatcttgctagaggaaatccaattgctttggcacctgctgttttgggtagcatatataaggatttaa |
20046315 |
T |
|
| Q |
110 |
ctttatttaagaaaacaattattgatctgtcaaaatatcttgttggtg |
157 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||||| ||||||| |
|
|
| T |
20046316 |
gtttatttaagaacacaattattgatctgttaaaatatccggttggtg |
20046363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 20016220 - 20016076
Alignment:
| Q |
13 |
gtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaactt |
112 |
Q |
| |
|
|||||||||| ||||||| | ||||||||| ||||||||||| |||||| ||| ||||| | ||| |||| |||||||||||| |||| ||||||| || |
|
|
| T |
20016220 |
gtgaaaagttgtttgtttccgattgctattcatcttgctagacgaaatcctattgctttggcaccagctgtcttggctagcatatataaagatttaagtt |
20016121 |
T |
|
| Q |
113 |
tatttaagaaaacaattattgatctgtcaaaatatcttgttggtg |
157 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||||||| ||| |||| |
|
|
| T |
20016120 |
tgtttaagaaaacaattgttgatttgtcaaaatatcatgtgggtg |
20016076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 26653248 - 26653392
Alignment:
| Q |
13 |
gtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaactt |
112 |
Q |
| |
|
|||||||||| |||||||||||||||| || ||||||||||| |||||| ||| ||||| | ||| ||||||| ||||| ||| ||||||| || |||| |
|
|
| T |
26653248 |
gtgaaaagttctttgttttctattgctgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagtatatataaggacttgactt |
26653347 |
T |
|
| Q |
113 |
tatttaagaaaacaattattgatctgtcaaaatatcttgttggtg |
157 |
Q |
| |
|
| ||||||||||||||| ||| | ||||||||||| |||||||| |
|
|
| T |
26653348 |
tgtttaagaaaacaattgttggtttgtcaaaatattatgttggtg |
26653392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 20036624 - 20036478
Alignment:
| Q |
11 |
tggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaac |
110 |
Q |
| |
|
|||||||||||| ||||||| |||||||| | ||||||||||| ||||||| ||| |||| | || ||||||| ||||| || ||||||||||||| |
|
|
| T |
20036624 |
tggtgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaac |
20036525 |
T |
|
| Q |
111 |
tttatttaagaaaacaattattgatctgtcaaaatatcttgttggtg |
157 |
Q |
| |
|
||| ||||||||||||||| ||||| ||||||||| || |||||||| |
|
|
| T |
20036524 |
tttgtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtg |
20036478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 19951239 - 19951364
Alignment:
| Q |
32 |
ctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaactttatttaagaaaacaattat |
131 |
Q |
| |
|
||||||||||| ||||||||||| |||||| ||| ||||| | ||| ||||||| ||||||||| |||||||||||||||| ||||| ||| ||||| | |
|
|
| T |
19951239 |
ctattgctattcatcttgctagaggaaatcctattgctttggctccagctgttttagctagcatatataaggatttaactttgtttaaaaaagcaattgt |
19951338 |
T |
|
| Q |
132 |
tgatctgtcaaaatatcttgttggtg |
157 |
Q |
| |
|
|||| |||||||||||| ||| |||| |
|
|
| T |
19951339 |
tgatttgtcaaaatatcatgtgggtg |
19951364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 19956183 - 19956327
Alignment:
| Q |
13 |
gtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaactt |
112 |
Q |
| |
|
|||||||||||||||||| |||||| | || ||||||||||| |||||| ||| ||||| | ||| ||||||| ||||||||| ||||||||||||||| |
|
|
| T |
19956183 |
gtgaaaagttatttgtttcctattgttgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagcatatataaggatttaactt |
19956282 |
T |
|
| Q |
113 |
tatttaagaaaacaattattgatctgtcaaaatatcttgttggtg |
157 |
Q |
| |
|
| || ||||||| || ||||| |||||||||||| ||| |||| |
|
|
| T |
19956283 |
tgttaaagaaaaaaacagttgatttgtcaaaatatcctgtgggtg |
19956327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 19849087 - 19849233
Alignment:
| Q |
11 |
tggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaac |
110 |
Q |
| |
|
|||||||||||| ||||||| |||||||| | ||||||||||| ||||||| ||| |||| | || ||||||| ||||| || ||||||||||||| |
|
|
| T |
19849087 |
tggtgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaac |
19849186 |
T |
|
| Q |
111 |
tttatttaagaaaacaattattgatctgtcaaaatatcttgttggtg |
157 |
Q |
| |
|
||| |||||||||||||| | |||| ||||||||| || |||||||| |
|
|
| T |
19849187 |
tttgtttaagaaaacaatcactgatttgtcaaaatgtcatgttggtg |
19849233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 347 - 449
Target Start/End: Complemental strand, 20036160 - 20036058
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatg |
446 |
Q |
| |
|
||||| |||||| |||| |||||||||||| |||||||| || ||||| |||||||||| ||||||||||||||||||||||||||||| | ||||| | |
|
|
| T |
20036160 |
ttgagggtttctgagctggttggatttgagtctatagagcaatatcttccacatagagttgctatgcaatttggaattgatcaagatgttccgagttacg |
20036061 |
T |
|
| Q |
447 |
tgg |
449 |
Q |
| |
|
||| |
|
|
| T |
20036060 |
tgg |
20036058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 347 - 492
Target Start/End: Original strand, 19819121 - 19819265
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatg |
446 |
Q |
| |
|
|||||||||||| ||||| |||| ||||||| ||||||| || ||||| |||||||||| ||||||| ||||||||||||||||||||| | |||||| |
|
|
| T |
19819121 |
ttgagagtttctgagcttgttggttttgagtccatagagcaatatcttccacatagagttgctatgcagtttggaattgatcaagatgttcctggttatg |
19819220 |
T |
|
| Q |
447 |
tgggctatgttcagcgatacaaagtatatttcttggaaaaactact |
492 |
Q |
| |
|
| ||||| ||||| || || || || ||| ||||||||||||||| |
|
|
| T |
19819221 |
t-ggctaggttcaatgagactaaatacattgcttggaaaaactact |
19819265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 347 - 448
Target Start/End: Original strand, 19849557 - 19849658
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatg |
446 |
Q |
| |
|
|||||||||||| |||| ||||||||||||| |||||||| || ||| | ||||||||| ||| ||||||| ||||| |||||||||||| ||||||||| |
|
|
| T |
19849557 |
ttgagagtttctgagctcattggatttgagtctatagagcaatatctcccacatagagtctctttgcaattcggaatggatcaagatgttccaagttatg |
19849656 |
T |
|
| Q |
447 |
tg |
448 |
Q |
| |
|
|| |
|
|
| T |
19849657 |
tg |
19849658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 347 - 436
Target Start/End: Original strand, 19956645 - 19956734
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
||||||||||| |||| |||||||||||| |||||||| || ||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
19956645 |
ttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttgctatgcaatttggaattgatcaagatgtt |
19956734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 350 - 449
Target Start/End: Original strand, 19838957 - 19839056
Alignment:
| Q |
350 |
agagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatgtgg |
449 |
Q |
| |
|
|||||||| ||||| |||||||||||| |||||||| || ||||| |||||||||| |||||||||| ||||| |||||||||||| || ||||||||| |
|
|
| T |
19838957 |
agagtttccgagcttgttggatttgagtctatagagcaatatcttccacatagagttgctatgcaattcggaatggatcaagatgttccaggttatgtgg |
19839056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 347 - 586
Target Start/End: Original strand, 19832431 - 19832669
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatg |
446 |
Q |
| |
|
|||||||||||| ||||| |||| ||||||| ||||||| || ||||| |||||||||| ||||||| |||||||||||||||||||| | |||||| |
|
|
| T |
19832431 |
ttgagagtttctgagcttgttggttttgagtccatagagcaatatcttccacatagagttgctatgcagattggaattgatcaagatgttcctggttatg |
19832530 |
T |
|
| Q |
447 |
tgggctatgttcagcgatacaaagtatatttcttggaaaaactactctaggcccatgtctgacnnnnnnntttattttccatcaaagttgttcaaggcag |
546 |
Q |
| |
|
| ||||| ||||| || || || || ||| ||||||||||||||| ||||| || ||||| | ||||||||| ||| || || |||||| |
|
|
| T |
19832531 |
t-ggctaggttcaatgagactaaatacattgcttggaaaaactactgcaggccaatatctgataaaaacttgtattttccaccaagattatttgaggcag |
19832629 |
T |
|
| Q |
547 |
atgttaccatgcattatgtaaagtggtggaagcaattggt |
586 |
Q |
| |
|
||||||||| | ||||| || ||||||||||||| |||| |
|
|
| T |
19832630 |
atgttaccacacgttatgcaaggtggtggaagcaactggt |
19832669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 379 - 448
Target Start/End: Original strand, 19812876 - 19812945
Alignment:
| Q |
379 |
tatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatgtg |
448 |
Q |
| |
|
|||||||| || ||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
19812876 |
tatagagcaatatcttccacatagagttgctatgcaatttggaattgatcaagatgttccaagttatgtg |
19812945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 26647098 - 26647222
Alignment:
| Q |
11 |
tggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaac |
110 |
Q |
| |
|
|||||||||||| ||||||| |||||||| || ||||||||||| | |||| |||| ||||| | || ||||||| |||||| || |||||||||||| |
|
|
| T |
26647098 |
tggtgaaaagttgtttgtttcctattgctgttcatcttgctagagggaatccaattgctttggcaccggctgttttagctagcttatataaggatttaag |
26647197 |
T |
|
| Q |
111 |
tttatttaagaaaacaattattgat |
135 |
Q |
| |
|
||| |||||||||||| || ||||| |
|
|
| T |
26647198 |
tttgtttaagaaaacacttgttgat |
26647222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 174 - 333
Target Start/End: Original strand, 20046449 - 20046608
Alignment:
| Q |
174 |
accacaacccatgttgatcaaccacatataacatttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattaggctca |
273 |
Q |
| |
|
||||||||||||||||||||| | || | | |||||| || |||||||||||||||| || ||||||||| |||||||||| ||||||| |||| |
|
|
| T |
20046449 |
accacaacccatgttgatcaatcccagcgaccctttattgtttaggtggcataaggttcacgcattgaaaattgataatgttaagttggcattagactca |
20046548 |
T |
|
| Q |
274 |
tctgtcaatgattttctttaacgtccatatgtcagatatgttgagaagttgggaattttt |
333 |
Q |
| |
|
||||| |||||||||||| ||||||||||| |||||| ||| |||| ||||||||| |
|
|
| T |
20046549 |
actgtcgatgattttctttggcgtccatatgttagatatcctgacaagtgtggaattttt |
20046608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 19812374 - 19812520
Alignment:
| Q |
11 |
tggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaac |
110 |
Q |
| |
|
||||||||| | ||||||| | || |||||| |||||||||| | ||| ||| ||||| | ||| |||| |||||||||||| |||| ||||||| |
|
|
| T |
19812374 |
tggtgaaaaagtctttgtttccgatcgctattcttcttgctagagggtatcctattgctttggcaccagctgtcttggctagcatatataaagatttaag |
19812473 |
T |
|
| Q |
111 |
tttatttaagaaaacaattattgatctgtcaaaatatcttgttggtg |
157 |
Q |
| |
|
||| ||||||||||||||| ||||| |||||||||||| |||||||| |
|
|
| T |
19812474 |
tttgtttaagaaaacaattgttgatttgtcaaaatatcctgttggtg |
19812520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 379 - 582
Target Start/End: Complemental strand, 20033859 - 20033657
Alignment:
| Q |
379 |
tatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatgtgggctatgttcagcgatacaaagtatatttc |
478 |
Q |
| |
|
|||||||| || ||||| |||||||||| |||||||||||||||| |||||||||||| |||||||||| | ||| ||||| ||| || || | | | | |
|
|
| T |
20033859 |
tatagagcaatatcttccacatagagttgctatgcaatttggaatggatcaagatgttccaagttatgt-gcctaggttcaacgagactaaagagaatgc |
20033761 |
T |
|
| Q |
479 |
ttggaaaaactactctaggcccatgtctgacnnnnnnntttattttccatcaaagttgttcaaggcagatgttaccatgcattatgtaaagtggtggaag |
578 |
Q |
| |
|
||||| |||||||| | ||||||| ||||| | ||||||||| ||| || || ||||||||||||||| || ||||| ||| ||||||||| |
|
|
| T |
20033760 |
ttggagaaactactgtcggcccatctctgatgaaaatttgtattttccaccaagattatttgaggcagatgttaccacgcgttatgcaaactggtggaag |
20033661 |
T |
|
| Q |
579 |
caat |
582 |
Q |
| |
|
|||| |
|
|
| T |
20033660 |
caat |
20033657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 19818651 - 19818797
Alignment:
| Q |
11 |
tggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaac |
110 |
Q |
| |
|
||||||||| |||| ||||| || ||||| |||||||||||||| | |||| ||| ||||| | || |||||||||||| ||| |||| ||||||| |
|
|
| T |
19818651 |
tggtgaaaaattatctgtttcctgttgctgttaatcttgctagagggaatcctattgctttggcaccggctgttttggctaacatttataaagatttaag |
19818750 |
T |
|
| Q |
111 |
tttatttaagaaaacaattattgatctgtcaaaatatcttgttggtg |
157 |
Q |
| |
|
||| |||||||||| ||| ||||| ||||||||||| |||||||| |
|
|
| T |
19818751 |
tttgtttaagaaaaaaatagttgatttgtcaaaatattctgttggtg |
19818797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 322
Target Start/End: Complemental strand, 20015992 - 20015842
Alignment:
| Q |
172 |
caaccacaacccatgttgatcaaccacatataacatttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattaggct |
271 |
Q |
| |
|
||||||||||||||||||||||| || | | | |||||| || |||||||||||||||| ||| ||||||||| |||||||| | ||||||| || |
|
|
| T |
20015992 |
caaccacaacccatgttgatcaatcatgaagaccctttattgtttaggtggcataaggttcaggctttgaaaattgacaatgttatggtggcattagact |
20015893 |
T |
|
| Q |
272 |
catctgtcaatgattttctttaacgtccatatgtcagatatgttgagaagt |
322 |
Q |
| |
|
|| || | |||||||||||| ||||||||| ||||||||| ||| |||| |
|
|
| T |
20015892 |
cagctattgatgattttctttggcgtccatatttcagatatgctgataagt |
20015842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 347 - 436
Target Start/End: Original strand, 19854061 - 19854150
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
|||||||||||| |||| |||| ||||||| |||||||| || ||| | |||||||||| ||| |||||||||| |||||||||||||| |
|
|
| T |
19854061 |
ttgagagtttctgagctagttgggtttgagtttatagagcaatatctaccacatagagttgctaggcaatttggatttgatcaagatgtt |
19854150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 347 - 436
Target Start/End: Original strand, 19858633 - 19858722
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
|||||||||||| |||| |||| ||||||| |||||||| || ||| | |||||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
19858633 |
ttgagagtttctgagctagttgggtttgagtttatagagcaatatctaccacatagagttgctatgcaatttgaatttgatcaagatgtt |
19858722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 758 - 869
Target Start/End: Original strand, 20046985 - 20047098
Alignment:
| Q |
758 |
atgttcctactgaaaattttgtacatgattgtgcaaaagttgaagaaaatatt-atgcttcttccatatcaattg-gaattgtaatcctgtggaagagtc |
855 |
Q |
| |
|
|||||||| ||||||||| || |||||||||||| |||| || ||||||||| ||||||||||||||| | || | |||||||||||| | ||||||| |
|
|
| T |
20046985 |
atgttcctgctgaaaattctgcacatgattgtgcgaaagctgttgaaaatattgttgcttcttccatatctactgaggattgtaatcctgcgaaagagtc |
20047084 |
T |
|
| Q |
856 |
caacaatgtaattt |
869 |
Q |
| |
|
||||||||||||| |
|
|
| T |
20047085 |
gaacaatgtaattt |
20047098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 347 - 436
Target Start/End: Complemental strand, 24839531 - 24839442
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
|||||||||||| |||| |||||||||||| |||||| | || ||| | |||||||||| |||||||||| ||| |||||||||||||| |
|
|
| T |
24839531 |
ttgagagtttctgagctagttggatttgagtctatagaacaatatctaccacatagagttgctatgcaattcggatttgatcaagatgtt |
24839442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 17115040 - 17115170
Alignment:
| Q |
172 |
caaccacaacccatgttgatcaaccacatataacatttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattaggct |
271 |
Q |
| |
|
||||||||| |||||||||||||||| | | | |||||| || |||||||||| ||||| |||| |||||||| |||||||||| ||||||| || |
|
|
| T |
17115040 |
caaccacaatccatgttgatcaaccatggagaccctttattgtttaggtggcatagggttcaggccgtgaaaattgacaatgttaagctagcattagact |
17115139 |
T |
|
| Q |
272 |
catctgtcaatgattttctttaacgtccata |
302 |
Q |
| |
|
| ||||| |||||||||||| |||||||| |
|
|
| T |
17115140 |
tagctgtcgatgattttctttggcgtccata |
17115170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 560 - 726
Target Start/End: Complemental strand, 20015546 - 20015380
Alignment:
| Q |
560 |
ttatgtaaagtggtggaagcaattggtgttaggtcatggagatttcattatgaagattgtgaagcggaagaaaggtgtgaattcaaggaaatgtaaaact |
659 |
Q |
| |
|
||||| || |||||||||||||| ||| || ||||| ||||||| ||| ||| |||||||||||||||| | ||| | |||||||||| || | || |
|
|
| T |
20015546 |
ttatgcaatgtggtggaagcaatcggtattgggtcacagagattttgttaagaacattgtgaagcggaagagaagtgaaagttcaaggaaacatagacct |
20015447 |
T |
|
| Q |
660 |
cgtgtaggaaaagctaacaaaagcggtattcatgttggtggtcagcctagatttcgtcccaatcttg |
726 |
Q |
| |
|
| | |||||||| |||||| |||| ||| | ||||||||| || ||| ||||| |||||||||||| |
|
|
| T |
20015446 |
catctaggaaaaactaacagaagcagtaatgatgttggtgttccacctggattttgtcccaatcttg |
20015380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 379 - 448
Target Start/End: Original strand, 19951717 - 19951786
Alignment:
| Q |
379 |
tatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatgtg |
448 |
Q |
| |
|
|||||||| || ||||| |||||||||| |||||||||||| ||| |||||||||||| | ||||||||| |
|
|
| T |
19951717 |
tatagagcaatatcttccacatagagttgctatgcaatttgcaatggatcaagatgttccgagttatgtg |
19951786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 347 - 436
Target Start/End: Original strand, 26647565 - 26647654
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
|||||||||||| ||||| ||||||| || | |||||| | | ||| | |||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
26647565 |
ttgagagtttctgagcttgttggattcgactctatagaacagtatctgccacatagagttgctatgcaatttggaatggatcaagatgtt |
26647654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 541 - 592
Target Start/End: Original strand, 19813037 - 19813088
Alignment:
| Q |
541 |
aggcagatgttaccatgcattatgtaaagtggtggaagcaattggtgttagg |
592 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
19813037 |
aggcagatgttaccacgcattatgtcaagtggtggaagcaatttgttttagg |
19813088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 19838492 - 19838635
Alignment:
| Q |
13 |
gtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaactt |
112 |
Q |
| |
|
|||||||| | ||||||| | |||| | || ||||||||||| ||||| ||| ||||| | ||| ||||||| ||||||||| |||| |||||||||| |
|
|
| T |
19838492 |
gtgaaaagctttttgtttccaattgttgttcatcttgctagaggaaattctattgctttggcaccagctgttttagctagcatatataatgatttaactt |
19838591 |
T |
|
| Q |
113 |
tatttaagaaaacaattattgatctgtcaaaatatcttgttggt |
156 |
Q |
| |
|
| || ||||||| || ||||| |||||||| ||| ||||||| |
|
|
| T |
19838592 |
tgttaaagaaaaaaacagttgatttgtcaaaacatcctgttggt |
19838635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 19971710 - 19971845
Alignment:
| Q |
13 |
gtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaactt |
112 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| || | | |||| | ||| ||| ||||| | |||||||||||||||||| || ||||||||| |||| |
|
|
| T |
19971710 |
gtgaaaagttctttgtttcctattgctattcatttggttagaggcaatactattgctttggcaccaactgttttggctagcttatataaggattgaactc |
19971809 |
T |
|
| Q |
113 |
tatttaagaaaacaattattgatctgtcaaaatatc |
148 |
Q |
| |
|
| ||||||||| |||| ||||| || |||||||| |
|
|
| T |
19971810 |
tgtttaagaaacaaattgttgatttgaaaaaatatc |
19971845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 19858399 - 19858492
Alignment:
| Q |
175 |
ccacaacccatgttgatcaaccacatataacatttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattag |
268 |
Q |
| |
|
|||||||||||||||||||| || | ||| |||||| || ||||||||||||||| |||||||||| || ||||||||||| ||||||| |
|
|
| T |
19858399 |
ccacaacccatgttgatcaagcatggagaacctttattgtttaggtggcataaggttaaggccttgaaagttgacaatgttaagttggcattag |
19858492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 436
Target Start/End: Original strand, 19944278 - 19944367
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
||||||||||| |||| |||||||||||| |||||| | || ||| | | |||||||| |||||||||| ||| |||||||||||||| |
|
|
| T |
19944278 |
ttgagagtttccgagctagttggatttgagtctatagaacaatatctaccatatagagttgctatgcaattcggatttgatcaagatgtt |
19944367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 20007616 - 20007451
Alignment:
| Q |
561 |
tatgtaaagtggtggaagcaattggtgttaggtcatggagatttcattatgaagattgtgaagcggaagaaaggtgtgaattcaaggaaatgtaaaactc |
660 |
Q |
| |
|
|||| |||||||||||||||| |||| || |||||||| ||||| ||| ||| ||||||||||||||| | ||| | |||||||| | || | ||| |
|
|
| T |
20007616 |
tatgcaaagtggtggaagcaagtggtattgggtcatggcgattttgttaagaacgttgtgaagcggaagagaagtgcaatttcaaggagacatagatctc |
20007517 |
T |
|
| Q |
661 |
gtgtaggaaaagctaacaaaagcggtattcatgttggtggtcagcctagatttcgtcccaatcttg |
726 |
Q |
| |
|
||||||| || |||||| ||| | ||| ||||||||| || ||| |||||| ||||||||||| |
|
|
| T |
20007516 |
atgtaggacaatctaacagaagttggattgatgttggtgttccacctggatttcctcccaatcttg |
20007451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 19849358 - 19849464
Alignment:
| Q |
207 |
tttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattaggctcatctgtcaatgattttctttaacgtccatatgtc |
306 |
Q |
| |
|
|||||| || || ||||||||||||| ||||||||||||| |||||||| || ||||||| ||| || | |||||||||||| |||||||||| |
|
|
| T |
19849358 |
tttattgtttagatggcataaggttcaggccttgaaaattgacaatgttaggttggcattagactcggctatggatgattttctttggcgtccatatgct |
19849457 |
T |
|
| Q |
307 |
agatatg |
313 |
Q |
| |
|
||||||| |
|
|
| T |
19849458 |
agatatg |
19849464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 19853611 - 19853733
Alignment:
| Q |
13 |
gtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaactt |
112 |
Q |
| |
|
|||||||| | ||||||| ||||||||||| |||||||||| | ||| ||| ||||| | || |||||||||||||| || |||| ||||| | || |
|
|
| T |
19853611 |
gtgaaaagatctttgtttcctattgctattcgtcttgctagaggtaatactattgctttggcacctgctgttttggctagcttatataacgatttgagtt |
19853710 |
T |
|
| Q |
113 |
tatttaagaaaacaattattgat |
135 |
Q |
| |
|
| |||||||||| |||| ||||| |
|
|
| T |
19853711 |
tgtttaagaaaaaaattgttgat |
19853733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 20015755 - 20015669
Alignment:
| Q |
350 |
agagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
|||||||| ||||| |||||||||| | |||||||| | | | | ||| |||||| |||||||||||||||| |||||||||||| |
|
|
| T |
20015755 |
agagtttccgagcttgttggatttgactctatagagcagtatttgccacacagagttgctatgcaatttggaatggatcaagatgtt |
20015669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 67; Significance: 3e-29; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 22651912 - 22651774
Alignment:
| Q |
13 |
gtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaactt |
112 |
Q |
| |
|
|||||||||| ||||||| |||||||| || ||||||||||| |||||| ||| |||| | ||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
22651912 |
gtgaaaagttgtttgtttcctattgctgttcatcttgctagaggaaatcctattgcttttgcaccagctgttttggctagcatgtataaggatttaactt |
22651813 |
T |
|
| Q |
113 |
tatttaagaaaacaattattgatctgtcaaaatatcttg |
151 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
22651812 |
tgtttaagaaaacaattgttgatttgtcaaaacatcttg |
22651774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 347 - 436
Target Start/End: Complemental strand, 22655873 - 22655784
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
||||| |||||| ||||| |||||||||||| |||||| || ||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22655873 |
ttgagggtttctgagcttgttggatttgagtctatagaaaaatatcttccacgtagagtttctatgcaatttggaattgatcaagatgtt |
22655784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 347 - 436
Target Start/End: Original strand, 11544631 - 11544720
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
||||||||||| |||| |||| ||||||| ||| |||| || ||||| |||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
11544631 |
ttgagagtttccgagctagttggttttgagtctattgagcaatatcttccacatagagttgctatgcaatttggaatggatcaagatgtt |
11544720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 347 - 436
Target Start/End: Complemental strand, 22689230 - 22689141
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
|||||||||||| |||| |||||||||||| |||||||| || ||| | |||||||||| ||| ||| |||||||| |||||||||||| |
|
|
| T |
22689230 |
ttgagagtttctgagctagttggatttgagtctatagagcaatatctaccacatagagttgctaggcagtttggaatggatcaagatgtt |
22689141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 22689671 - 22689564
Alignment:
| Q |
16 |
aaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaactttat |
115 |
Q |
| |
|
||||||| ||||||| ||||| ||||| |||| |||||| | ||| ||| ||||| | || ||||||||||||||||| |||||||||| | ||| | |
|
|
| T |
22689671 |
aaaagttctttgtttactatttctattcatctggctagaggcaatactattgctttggcacctgctgttttggctagcatatataaggatttgagtttgt |
22689572 |
T |
|
| Q |
116 |
ttaagaaa |
123 |
Q |
| |
|
|||||||| |
|
|
| T |
22689571 |
ttaagaaa |
22689564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 22685641 - 22685596
Alignment:
| Q |
99 |
taaggatttaactttatttaagaaaacaattattgatctgtcaaaa |
144 |
Q |
| |
|
||||||||||| ||| ||||||||||||||| ||||| |||||||| |
|
|
| T |
22685641 |
taaggatttaagtttttttaagaaaacaattgttgatttgtcaaaa |
22685596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 59; Significance: 2e-24; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 1717308 - 1717454
Alignment:
| Q |
11 |
tggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaac |
110 |
Q |
| |
|
||||||||| | ||||||| |||||||| || ||||||||||| |||||| ||| ||||| | || ||||||| ||||||||| ||||||||||||| |
|
|
| T |
1717308 |
tggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaac |
1717407 |
T |
|
| Q |
111 |
tttatttaagaaaacaattattgatctgtcaaaatatcttgttggtg |
157 |
Q |
| |
|
||| |||||||||||||| ||| | |||||||||||| |||||||| |
|
|
| T |
1717408 |
tttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtg |
1717454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 347 - 448
Target Start/End: Original strand, 1717781 - 1717882
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatg |
446 |
Q |
| |
|
|||||||| ||| | ||| |||||||||| | |||||||| | ||| | |||||||||| |||||||||||||||| |||||||||||| ||||| ||| |
|
|
| T |
1717781 |
ttgagagtatctgaacttgttggatttgactctatagagcagtatctgccacatagagttgctatgcaatttggaatggatcaagatgttccaagtgatg |
1717880 |
T |
|
| Q |
447 |
tg |
448 |
Q |
| |
|
|| |
|
|
| T |
1717881 |
tg |
1717882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 662 - 726
Target Start/End: Original strand, 1718095 - 1718159
Alignment:
| Q |
662 |
tgtaggaaaagctaacaaaagcggtattcatgttggtggtcagcctagatttcgtcccaatcttg |
726 |
Q |
| |
|
||||||||||||||||||||| |||| | ||||||||| || ||| |||||| ||||||||||| |
|
|
| T |
1718095 |
tgtaggaaaagctaacaaaagtggtaatgatgttggtgttccacctggatttcctcccaatcttg |
1718159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 38483583 - 38483633
Alignment:
| Q |
398 |
catagagtttctatgcaatttggaattgatcaagatgtttcaagttatgtg |
448 |
Q |
| |
|
||||||||| ||||||||||||| || ||| |||||||| ||||||||||| |
|
|
| T |
38483583 |
catagagttgctatgcaatttggtatggattaagatgttacaagttatgtg |
38483633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 51; Significance: 1e-19; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 9815131 - 9815265
Alignment:
| Q |
11 |
tggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaac |
110 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||| ||||| | ||| ||||||| ||||| || |||| ||||||| |
|
|
| T |
9815131 |
tggtgaaaagttctttgttttctattgctattcatcttgctagaggaaattctattgctttggcaccagctgttttagctagtatttataacgatttaag |
9815230 |
T |
|
| Q |
111 |
tttatttaagaaaacaattattgatctgtcaaaat |
145 |
Q |
| |
|
||| |||||||||||||| || || ||||||||| |
|
|
| T |
9815231 |
tttgtttaagaaaacaatagttaatttgtcaaaat |
9815265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 26354948 - 26354814
Alignment:
| Q |
11 |
tggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaattactttgccgccaactgttttggctagcataaataaggatttaac |
110 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||| ||||||||||| ||||| ||| ||||| | || ||||||| ||||||||| |||||||||||| |
|
|
| T |
26354948 |
tggtgaaaagttctttgtttcctattgctattcatcttgctagaggaaattctattgctttggcaccggctgttttagctagcatatataaggatttaag |
26354849 |
T |
|
| Q |
111 |
tttatttaagaaaacaattattgatctgtcaaaat |
145 |
Q |
| |
|
| ||||||||||| ||| ||||| ||||||||| |
|
|
| T |
26354848 |
cgtgtttaagaaaaccattgttgatttgtcaaaat |
26354814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 348 - 448
Target Start/End: Complemental strand, 26354483 - 26354383
Alignment:
| Q |
348 |
tgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatgt |
447 |
Q |
| |
|
||||||||||| ||||| |||||||||| | |||||||| | | | | |||||||||| |||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
26354483 |
tgagagtttctgagcttgttggatttgactctatagagcagtatttgccacatagagttgctatgcaatttggaatggatcaagatgttccaagttatgt |
26354384 |
T |
|
| Q |
448 |
g |
448 |
Q |
| |
|
| |
|
|
| T |
26354383 |
g |
26354383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 347 - 448
Target Start/End: Complemental strand, 38435146 - 38435045
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatg |
446 |
Q |
| |
|
||||||||||| |||| ||||||||||| | ||| || | || ||| | |||||||| | ||||| ||||| ||||||||||||||||| ||||||||| |
|
|
| T |
38435146 |
ttgagagtttcctagctaattggatttgactctattgaacaatatctaccacatagagatgctatgtaatttagaattgatcaagatgttccaagttatg |
38435047 |
T |
|
| Q |
447 |
tg |
448 |
Q |
| |
|
|| |
|
|
| T |
38435046 |
tg |
38435045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 9815368 - 9815502
Alignment:
| Q |
179 |
aacccatgttgatcaaccacatataacatttatttttgaggtggcataaggttctggccttgaaaattagcaatgttaagtgtgcattaggctcatctgt |
278 |
Q |
| |
|
|||||||||||||||| ||| | | | |||||| || ||||| |||||||||| ||||||||||||| |||||||||| ||||||| ||| || | |
|
|
| T |
9815368 |
aacccatgttgatcaatcacggagaccctttattgtttaggtgacataaggttcaggccttgaaaattgacaatgttaagctggcattagactcggctat |
9815467 |
T |
|
| Q |
279 |
caatgattttctttaacgtccatatgtcagatatg |
313 |
Q |
| |
|
|||||||||||| ||||||||| | ||||||| |
|
|
| T |
9815468 |
ggatgattttctttggcgtccatattttagatatg |
9815502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 448
Target Start/End: Original strand, 9815595 - 9815696
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtttcaagttatg |
446 |
Q |
| |
|
||||||||||| ||||| ||||||| || | |||||||| | | | | |||||||||| |||||||||||| ||| |||||||||||| ||| ||||| |
|
|
| T |
9815595 |
ttgagagtttccgagcttgttggattcgactctatagagcagtatttgccacatagagttgctatgcaatttgaaatggatcaagatgttccaacttatg |
9815694 |
T |
|
| Q |
447 |
tg |
448 |
Q |
| |
|
|| |
|
|
| T |
9815695 |
tg |
9815696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 347 - 436
Target Start/End: Complemental strand, 39191533 - 39191444
Alignment:
| Q |
347 |
ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatagagtttctatgcaatttggaattgatcaagatgtt |
436 |
Q |
| |
|
||||||||||| |||| |||| ||||||| ||| |||| || ||||| |||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
39191533 |
ttgagagtttcggagctagttggttttgagtctattgagcaatatcttccacatagagttgctatgcaatttggaatggatcaagatgtt |
39191444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University