View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4871_high_8 (Length: 221)
Name: NF4871_high_8
Description: NF4871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4871_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 12003710 - 12003607
Alignment:
| Q |
2 |
acatcaaaattttgatgtcaaatataatattttaaattttgtatttctttaaaatgtttgtaagtggtagacaataaaaaataaagaggagatatccata |
101 |
Q |
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| T |
12003710 |
acatcaaaattttaatgtcaaatataatattttaaattttgtatttctttaaaatgtttgtaagtggtagatgataaaaaataaagaggagatattgata |
12003611 |
T |
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| Q |
102 |
tgta |
105 |
Q |
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|||| |
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| T |
12003610 |
tgta |
12003607 |
T |
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