View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4875-Insertion-4 (Length: 273)

Name: NF4875-Insertion-4
Description: NF4875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4875-Insertion-4
NF4875-Insertion-4
[»] chr3 (43 HSPs)
chr3 (6-273)||(38456353-38456620)
chr3 (138-184)||(3537425-3537471)
chr3 (138-184)||(39499417-39499463)
chr3 (138-184)||(47789262-47789308)
chr3 (140-184)||(44411972-44412016)
chr3 (140-184)||(49861055-49861099)
chr3 (138-184)||(52620651-52620697)
chr3 (139-181)||(55439807-55439849)
chr3 (197-254)||(22533272-22533329)
chr3 (197-254)||(42807061-42807118)
chr3 (138-182)||(517796-517840)
chr3 (143-183)||(3537083-3537123)
chr3 (140-184)||(30121340-30121384)
chr3 (140-176)||(47789619-47789655)
chr3 (141-181)||(55445131-55445171)
chr3 (144-179)||(7661272-7661307)
chr3 (138-173)||(43237520-43237555)
chr3 (140-179)||(49183564-49183603)
chr3 (138-176)||(2420535-2420573)
chr3 (130-184)||(5939589-5939643)
chr3 (138-176)||(32859066-32859104)
chr3 (138-184)||(39115124-39115170)
chr3 (138-184)||(44400918-44400964)
chr3 (138-184)||(48908708-48908754)
chr3 (138-184)||(53620159-53620205)
chr3 (138-184)||(53888705-53888751)
chr3 (138-167)||(1132756-1132785)
chr3 (137-166)||(17642439-17642468)
chr3 (197-254)||(29543158-29543215)
chr3 (139-184)||(54372728-54372773)
chr3 (140-184)||(3042946-3042990)
chr3 (138-166)||(3043291-3043319)
chr3 (138-166)||(11500978-11501006)
chr3 (138-166)||(35283324-35283352)
chr3 (138-166)||(36796303-36796331)
chr3 (140-184)||(36796644-36796688)
chr3 (138-166)||(41962148-41962176)
chr3 (138-166)||(42583449-42583477)
chr3 (138-166)||(45555507-45555535)
chr3 (140-176)||(45555867-45555903)
chr3 (223-263)||(45967770-45967810)
chr3 (144-184)||(49682824-49682864)
chr3 (138-166)||(54372402-54372430)
[»] scaffold0028 (1 HSPs)
scaffold0028 (138-184)||(35271-35317)
[»] chr7 (28 HSPs)
chr7 (138-184)||(34651869-34651915)
chr7 (140-184)||(7666982-7667026)
chr7 (138-182)||(38505501-38505545)
chr7 (140-184)||(28437359-28437403)
chr7 (138-178)||(30081236-30081276)
chr7 (140-176)||(38236019-38236055)
chr7 (140-184)||(38505162-38505206)
chr7 (202-254)||(40617511-40617563)
chr7 (138-176)||(3658684-3658722)
chr7 (140-178)||(4058310-4058348)
chr7 (138-176)||(7667338-7667376)
chr7 (144-182)||(15749116-15749154)
chr7 (140-178)||(16805738-16805776)
chr7 (138-184)||(33871776-33871822)
chr7 (138-184)||(42254187-42254233)
chr7 (138-184)||(42854118-42854164)
chr7 (138-167)||(16805383-16805412)
chr7 (138-167)||(33113459-33113488)
chr7 (140-181)||(46442581-46442622)
chr7 (138-171)||(46611978-46612011)
chr7 (140-184)||(3658329-3658373)
chr7 (140-184)||(23465818-23465862)
chr7 (140-176)||(33406805-33406841)
chr7 (140-184)||(33872219-33872263)
chr7 (202-254)||(38342234-38342286)
chr7 (138-166)||(42112774-42112802)
chr7 (140-184)||(43189076-43189120)
chr7 (140-184)||(44690082-44690126)
[»] chr5 (21 HSPs)
chr5 (138-184)||(10295705-10295751)
chr5 (138-182)||(9684607-9684651)
chr5 (138-182)||(18670903-18670947)
chr5 (138-176)||(25598585-25598623)
chr5 (138-176)||(38120011-38120049)
chr5 (138-174)||(17093126-17093162)
chr5 (144-184)||(25027141-25027181)
chr5 (144-184)||(38302182-38302222)
chr5 (139-182)||(10437857-10437900)
chr5 (139-182)||(13569260-13569303)
chr5 (138-176)||(1935237-1935275)
chr5 (140-182)||(5772886-5772928)
chr5 (139-185)||(33718399-33718445)
chr5 (138-167)||(4648799-4648828)
chr5 (133-182)||(39649435-39649484)
chr5 (138-166)||(12229301-12229329)
chr5 (138-166)||(32760632-32760660)
chr5 (140-176)||(35700932-35700968)
chr5 (138-182)||(35701624-35701668)
chr5 (140-176)||(35708926-35708962)
chr5 (138-166)||(38302526-38302554)
[»] chr4 (40 HSPs)
chr4 (138-184)||(20534146-20534192)
chr4 (138-184)||(22845048-22845094)
chr4 (206-254)||(40155557-40155605)
chr4 (138-184)||(22165582-22165628)
chr4 (138-184)||(24280130-24280176)
chr4 (138-184)||(31530242-31530288)
chr4 (225-271)||(32808188-32808234)
chr4 (138-184)||(38366245-38366291)
chr4 (138-176)||(41844662-41844700)
chr4 (144-184)||(17622295-17622335)
chr4 (138-182)||(29114401-29114445)
chr4 (140-184)||(32060865-32060909)
chr4 (140-184)||(37756537-37756581)
chr4 (140-184)||(38136652-38136696)
chr4 (142-182)||(38137001-38137041)
chr4 (138-174)||(45899511-45899547)
chr4 (138-176)||(7182364-7182402)
chr4 (140-182)||(12709001-12709043)
chr4 (140-182)||(33500392-33500434)
chr4 (138-184)||(33500740-33500786)
chr4 (138-176)||(54806345-54806383)
chr4 (139-176)||(31340658-31340695)
chr4 (143-184)||(50643042-50643083)
chr4 (138-170)||(904436-904468)
chr4 (144-176)||(7182009-7182041)
chr4 (142-182)||(16318491-16318531)
chr4 (138-182)||(16422789-16422833)
chr4 (144-184)||(16535910-16535950)
chr4 (138-178)||(24291611-24291651)
chr4 (138-182)||(28175631-28175675)
chr4 (140-184)||(29114061-29114105)
chr4 (140-176)||(31187267-31187303)
chr4 (138-166)||(32060559-32060587)
chr4 (140-176)||(32648822-32648858)
chr4 (140-176)||(36151189-36151225)
chr4 (140-176)||(38365901-38365937)
chr4 (140-184)||(41363630-41363674)
chr4 (138-166)||(41363995-41364023)
chr4 (223-263)||(45636685-45636725)
chr4 (140-184)||(55510123-55510167)
[»] chr2 (33 HSPs)
chr2 (138-184)||(13765752-13765798)
chr2 (138-184)||(25955650-25955696)
chr2 (138-182)||(11514914-11514958)
chr2 (139-182)||(43572715-43572758)
chr2 (138-184)||(44137296-44137342)
chr2 (186-271)||(12606114-12606199)
chr2 (132-184)||(8990773-8990825)
chr2 (140-176)||(14008147-14008183)
chr2 (138-174)||(18826047-18826083)
chr2 (219-263)||(21579442-21579486)
chr2 (138-181)||(6655988-6656031)
chr2 (139-173)||(3039124-3039158)
chr2 (138-184)||(4003298-4003344)
chr2 (138-184)||(13018294-13018340)
chr2 (140-182)||(13018645-13018687)
chr2 (138-176)||(14008501-14008539)
chr2 (138-184)||(18018415-18018461)
chr2 (138-184)||(31083017-31083063)
chr2 (138-184)||(36567094-36567140)
chr2 (138-176)||(38294115-38294153)
chr2 (138-176)||(40357684-40357722)
chr2 (138-184)||(41099931-41099977)
chr2 (138-184)||(43572360-43572406)
chr2 (138-179)||(16813506-16813547)
chr2 (138-179)||(16852785-16852826)
chr2 (140-185)||(32761438-32761483)
chr2 (138-166)||(4041844-4041872)
chr2 (138-166)||(8411109-8411137)
chr2 (140-176)||(10165287-10165323)
chr2 (140-184)||(15803391-15803435)
chr2 (140-176)||(18780254-18780290)
chr2 (138-182)||(18781640-18781684)
chr2 (138-166)||(44020232-44020260)
[»] chr1 (43 HSPs)
chr1 (138-184)||(33991761-33991807)
chr1 (138-184)||(43571785-43571831)
chr1 (140-184)||(32300274-32300318)
chr1 (138-182)||(36886740-36886784)
chr1 (140-183)||(32299323-32299366)
chr1 (138-184)||(896313-896359)
chr1 (6-56)||(49858469-49858519)
chr1 (139-184)||(42161871-42161916)
chr1 (140-184)||(1688035-1688079)
chr1 (140-176)||(9595788-9595824)
chr1 (143-179)||(31920172-31920208)
chr1 (138-182)||(34154495-34154539)
chr1 (138-182)||(36269613-36269657)
chr1 (140-176)||(38795192-38795228)
chr1 (140-176)||(39179279-39179315)
chr1 (138-176)||(1523822-1523860)
chr1 (138-176)||(15464038-15464076)
chr1 (138-184)||(23871279-23871325)
chr1 (138-184)||(37649432-37649478)
chr1 (140-182)||(37649783-37649825)
chr1 (138-184)||(41432578-41432624)
chr1 (138-176)||(50247823-50247861)
chr1 (138-184)||(50402961-50403007)
chr1 (131-184)||(13255562-13255615)
chr1 (138-179)||(29091957-29091998)
chr1 (138-183)||(40136435-40136480)
chr1 (137-166)||(51246746-51246775)
chr1 (138-166)||(1278349-1278377)
chr1 (223-263)||(2654527-2654567)
chr1 (140-184)||(2909336-2909380)
chr1 (140-176)||(2925755-2925791)
chr1 (140-184)||(4204597-4204641)
chr1 (144-184)||(7401388-7401428)
chr1 (138-166)||(8156517-8156545)
chr1 (140-176)||(17556540-17556576)
chr1 (140-176)||(26940478-26940514)
chr1 (140-184)||(27500203-27500247)
chr1 (140-176)||(45565356-45565392)
chr1 (138-166)||(49479253-49479281)
chr1 (138-166)||(50476421-50476449)
chr1 (142-182)||(52068307-52068347)
chr1 (140-176)||(52073621-52073657)
chr1 (223-263)||(52249541-52249581)
[»] chr6 (15 HSPs)
chr6 (138-183)||(29241649-29241694)
chr6 (140-184)||(4909698-4909742)
chr6 (138-174)||(24734757-24734793)
chr6 (142-181)||(32719543-32719582)
chr6 (144-182)||(1567157-1567195)
chr6 (138-176)||(2365770-2365808)
chr6 (140-174)||(5825561-5825595)
chr6 (138-176)||(23094945-23094983)
chr6 (138-182)||(6855505-6855549)
chr6 (140-176)||(26713735-26713771)
chr6 (138-166)||(28551723-28551751)
chr6 (140-176)||(31345187-31345223)
chr6 (138-166)||(31345553-31345581)
chr6 (202-254)||(32533827-32533879)
chr6 (139-179)||(33590497-33590537)
[»] chr8 (21 HSPs)
chr8 (138-182)||(14581914-14581958)
chr8 (140-184)||(36906408-36906452)
chr8 (140-182)||(79781-79823)
chr8 (138-176)||(1941866-1941904)
chr8 (140-184)||(33230864-33230908)
chr8 (140-176)||(34148398-34148434)
chr8 (144-184)||(34349934-34349974)
chr8 (139-182)||(23932724-23932767)
chr8 (138-185)||(25033598-25033645)
chr8 (138-184)||(1839636-1839682)
chr8 (138-176)||(34272384-34272422)
chr8 (138-183)||(13864908-13864953)
chr8 (142-183)||(27030031-27030072)
chr8 (144-184)||(1111059-1111099)
chr8 (140-176)||(1942205-1942241)
chr8 (140-176)||(3404746-3404782)
chr8 (138-182)||(26772808-26772852)
chr8 (138-166)||(29611872-29611900)
chr8 (138-166)||(36906062-36906090)
chr8 (140-184)||(37659351-37659395)
chr8 (223-271)||(43775506-43775554)
[»] scaffold0717 (1 HSPs)
scaffold0717 (138-184)||(1798-1844)
[»] scaffold0006 (1 HSPs)
scaffold0006 (138-179)||(59670-59711)
[»] scaffold0051 (2 HSPs)
scaffold0051 (138-178)||(6929-6969)
scaffold0051 (138-178)||(7912-7952)
[»] scaffold1562 (1 HSPs)
scaffold1562 (138-184)||(359-405)
[»] scaffold1158 (1 HSPs)
scaffold1158 (138-184)||(2188-2234)
[»] scaffold0952 (1 HSPs)
scaffold0952 (138-184)||(3485-3531)
[»] scaffold0136 (1 HSPs)
scaffold0136 (140-182)||(2189-2231)
[»] scaffold0031 (1 HSPs)
scaffold0031 (138-167)||(93311-93340)
[»] scaffold0636 (1 HSPs)
scaffold0636 (140-184)||(8610-8654)
[»] scaffold0248 (1 HSPs)
scaffold0248 (142-182)||(363-403)
[»] scaffold0245 (1 HSPs)
scaffold0245 (138-166)||(4026-4054)
[»] scaffold0229 (1 HSPs)
scaffold0229 (138-166)||(4357-4385)
[»] scaffold0128 (2 HSPs)
scaffold0128 (138-182)||(26249-26293)
scaffold0128 (140-184)||(26600-26644)


Alignment Details
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 273
Target Start/End: Original strand, 38456353 - 38456620
Alignment:
Q  6 cataagtgaggagaagaaagaactctttctgcttccagggtgcactcttatagttcattgcaatatactgtcaattctagtaacaattattcagtttatt 105  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38456353 cataagtgaggagaagaaagaactctttttgcttccagggtgcactcttatagttcattgcaatatactgtcaattctagtaacaattattcagtttatt 38456452  T
Q  106 ctagttgcaattaatcagcaactcccaaaccgttaggctttgtttgggagtttggaggggaaaggaggggaaggctttgtcgacaattgaaataatctac 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  38456453 ctagttgcaattaatcagcaactcccaaaccgttaggctttgtttgggagtttggaggggaagggaggggagagctttgtcgacaattgaaataatctac 38456552  T
Q  206 taaacctatcacgtaacgacactccacccacccaaacatccgtccaaaagagagtatttttgccatta 273  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38456553 taaacctgtcatgtaacgacactccacccacccaaacatccgtccaaaagagagtatttttgccatta 38456620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 3537471 - 3537425
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  3537471 ttaggctttgtttgggagtttggaggggaagggaggggaaggctttg 3537425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 39499463 - 39499417
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  39499463 ttaggctttgtttgggagtttggaggggaagggaggggagggctttg 39499417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 47789262 - 47789308
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  47789262 ttaggctttgtttgggagtttggaggggaagggaggggagggctttg 47789308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 44411972 - 44412016
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  44411972 aggctttgtttgggagtttggaggggaagggaggggagggctttg 44412016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 49861099 - 49861055
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  49861099 aggctttgtttgggagtttggaggggaagggaggggagggctttg 49861055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 52620651 - 52620697
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||    
T  52620651 ttaggctttgtttgggagtttggaggggaggggaggggagggctttg 52620697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 55439849 - 55439807
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggaggggaaggct 181  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  55439849 taggctttgtttgggagtttggaggggaagggaggggagggct 55439807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 22533329 - 22533272
Alignment:
Q  197 ataatctactaaacctatcacgtaacgacactccacccacccaaacatccgtccaaaa 254  Q
    ||||||||||||||||||||||||| |||| | | |||| |||||||| |||||||||    
T  22533329 ataatctactaaacctatcacgtaaagacaattctcccaaccaaacattcgtccaaaa 22533272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 42807061 - 42807118
Alignment:
Q  197 ataatctactaaacctatcacgtaacgacactccacccacccaaacatccgtccaaaa 254  Q
    ||||||||||||||||||||||||| ||||   | |||||| ||||||||||||||||    
T  42807061 ataatctactaaacctatcacgtaaagacaaatctcccacctaaacatccgtccaaaa 42807118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 517840 - 517796
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||    
T  517840 ttaggctttgtttgcgagtttggaggggaagggagggaaaggctt 517796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 3537083 - 3537123
Alignment:
Q  143 ctttgtttgggagtttggaggggaaaggaggggaaggcttt 183  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  3537083 ctttgtttgcgagtttggaggggaagggaggggaaggcttt 3537123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 30121340 - 30121384
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||  |||||||| |||||||    
T  30121340 aggctttgtttgggagtttggaggggaggggaggggagggctttg 30121384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 47789655 - 47789619
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||| ||||||||    
T  47789655 aggctttgtttgggagtttggaggggaagggagggga 47789619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 55445171 - 55445131
Alignment:
Q  141 ggctttgtttgggagtttggaggggaaaggaggggaaggct 181  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  55445171 ggctttgtttgggagtttggaggggaagggaggggagggct 55445131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 179
Target Start/End: Complemental strand, 7661307 - 7661272
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaagg 179  Q
    |||||||||||||||||||||||||||||| |||||    
T  7661307 tttgtttgggagtttggaggggaaaggaggagaagg 7661272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 173
Target Start/End: Complemental strand, 43237555 - 43237520
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagg 173  Q
    |||||||||||||||||||||||||||||| |||||    
T  43237555 ttaggctttgtttgggagtttggaggggaagggagg 43237520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 49183564 - 49183603
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaagg 179  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  49183564 aggctttgtttgtgagtttggaggggaatggaggggaagg 49183603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 2420535 - 2420573
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  2420535 ttaggctttgtttgggagtttagaggggaatggagggga 2420573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 5939589 - 5939643
Alignment:
Q  130 ccaaaccgttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||  ||||||||||||||||||||||||||||| | | || |||||||||    
T  5939589 ccaaacccgtaggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 5939643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 32859104 - 32859066
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  32859104 ttaggctttgtttgggagtttggaggggaggggagggga 32859066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 39115170 - 39115124
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||| |||||||||||| || |||||||| |||||||    
T  39115170 ttaggctttgtttgtgagtttggagggaaagggaggggatggctttg 39115124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 44400964 - 44400918
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| | | || |||||||||    
T  44400964 ttaggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 44400918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 48908708 - 48908754
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| | | || |||||||||    
T  48908708 ttaggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 48908754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 53620159 - 53620205
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||| ||||||||||||||| ||||| || |||||||    
T  53620159 ttaggctttgtttgcgagtttggaggggaagggaggtgagggctttg 53620205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 53888751 - 53888705
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||  ||| || |||||||||    
T  53888751 ttaggctttgtttgggagtttggaggggaggggaaggaaaggctttg 53888705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 1132756 - 1132785
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaa 167  Q
    ||||||||||||||||||||||||||||||    
T  1132756 ttaggctttgtttgggagtttggaggggaa 1132785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 166
Target Start/End: Original strand, 17642439 - 17642468
Alignment:
Q  137 gttaggctttgtttgggagtttggagggga 166  Q
    ||||||||||||||||||||||||||||||    
T  17642439 gttaggctttgtttgggagtttggagggga 17642468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 29543158 - 29543215
Alignment:
Q  197 ataatctactaaacctatcacgtaacgacactccacccacccaaacatccgtccaaaa 254  Q
    ||||||||||||||||||||||||| ||||   | |||| ||||| ||||||||||||    
T  29543158 ataatctactaaacctatcacgtaatgacaactctcccaaccaaatatccgtccaaaa 29543215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 54372773 - 54372728
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||| ||||||| ||||||| | ||||||||||||||    
T  54372773 taggctttgtttgtgagtttgaaggggaaggtaggggaaggctttg 54372728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 3042946 - 3042990
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||||||||||  || |||| |||||||    
T  3042946 aggctttgtttgggagtttggaggggaagagatgggagggctttg 3042990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 3043319 - 3043291
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  3043319 ttaggctttgtttgggagtttggagggga 3043291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 11501006 - 11500978
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  11501006 ttaggctttgtttgggagtttggagggga 11500978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 35283352 - 35283324
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  35283352 ttaggctttgtttgggagtttggagggga 35283324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 36796303 - 36796331
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  36796303 ttaggctttgtttgggagtttggagggga 36796331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 36796688 - 36796644
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||||||  || |||||||| |||||||    
T  36796688 aggctttgtttgggagtttggaggaaaagggaggggagggctttg 36796644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 41962176 - 41962148
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  41962176 ttaggctttgtttgggagtttggagggga 41962148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 42583477 - 42583449
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  42583477 ttaggctttgtttgggagtttggagggga 42583449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 45555507 - 45555535
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  45555507 ttaggctttgtttgggagtttggagggga 45555535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 45555903 - 45555867
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  45555903 aggctttgtttgggagtttggaggggaatggaaggga 45555867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 45967770 - 45967810
Alignment:
Q  223 gacactccacccacccaaacatccgtccaaaagagagtatt 263  Q
    ||||| ||||||||||||||||| |||||||| ||||||||    
T  45967770 gacacaccacccacccaaacatcagtccaaaaaagagtatt 45967810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 49682824 - 49682864
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||| ||||||||||||||| |||||||| |||||||    
T  49682824 tttgtttgtgagtttggaggggaagggaggggagggctttg 49682864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 54372402 - 54372430
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  54372402 ttaggctttgtttgggagtttggagggga 54372430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 35271 - 35317
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  35271 ttaggctttgtttgggagtttggaggggaagggaggggagggctttg 35317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 34651869 - 34651915
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  34651869 ttaggctttgtttgggagtttggaggggaagggaggggatggctttg 34651915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 7666982 - 7667026
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  7666982 aggctttgtttgggagtttggaggggaagggaggggagggctttg 7667026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 38505545 - 38505501
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  38505545 ttaggctttgtttgcgagtttggaggggaagggaggggaaggctt 38505501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 28437359 - 28437403
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||    
T  28437359 aggctttgtttgagagtttggaggggaagggaggggagggctttg 28437403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 30081236 - 30081276
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaag 178  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  30081236 ttaggctttgtttgtgagtttggaggggaagggaggggaag 30081276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 38236055 - 38236019
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||| ||||||||    
T  38236055 aggctttgtttgggagtttggaggggaagggagggga 38236019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 38505162 - 38505206
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||    
T  38505162 aggctttgtttgggagtttggaggggaggggaagggaaggctttg 38505206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 40617511 - 40617563
Alignment:
Q  202 ctactaaacctatcacgtaacgacactccacccacccaaacatccgtccaaaa 254  Q
    |||||||| |||||| |||||||||   |||||||||||||||||||||||||    
T  40617511 ctactaaatctatcatgtaacgacaactcacccacccaaacatccgtccaaaa 40617563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 3658722 - 3658684
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  3658722 ttaggctttgtttgggagtttggaggggaggggagggga 3658684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 4058348 - 4058310
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaag 178  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  4058348 aggctttgtttgcgagtttggaggggaagggaggggaag 4058310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 7667376 - 7667338
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  7667376 ttaggctttgtttgggagtttggaggggaggggagggga 7667338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 15749154 - 15749116
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  15749154 tttgtttgcgagtttggaggggaagggaggggaaggctt 15749116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 16805776 - 16805738
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaag 178  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  16805776 aggctttgtttgcgagtttggaggggaagggaggggaag 16805738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 33871776 - 33871822
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||| ||||||||||||||  ||| ||||||||||||    
T  33871776 ttaggctttgtttgcgagtttggaggggaggggaagggaaggctttg 33871822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 42254233 - 42254187
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| | | || |||||||||    
T  42254233 ttaggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 42254187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 42854118 - 42854164
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||| || |||||||||||| |||||||| |||||||    
T  42854118 ttaggctttgtttgtgaatttggaggggaagggaggggagggctttg 42854164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 16805383 - 16805412
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaa 167  Q
    ||||||||||||||||||||||||||||||    
T  16805383 ttaggctttgtttgggagtttggaggggaa 16805412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 33113459 - 33113488
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaa 167  Q
    ||||||||||||||||||||||||||||||    
T  33113459 ttaggctttgtttgggagtttggaggggaa 33113488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 46442581 - 46442622
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggct 181  Q
    |||||||| ||| ||||||||||||||| |||||||||||||    
T  46442581 aggctttggttgcgagtttggaggggaagggaggggaaggct 46442622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 46612011 - 46611978
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaagga 171  Q
    |||||||||||||| |||||||||||||||||||    
T  46612011 ttaggctttgtttgcgagtttggaggggaaagga 46611978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 3658329 - 3658373
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| | ||| || |||||||    
T  3658329 aggctttgtttgggagtttggaggggaaggaaggagagggctttg 3658373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 23465818 - 23465862
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||  ||| |||||| |||||    
T  23465818 aggctttgtttgggagtttggaggggaggggaagggaagactttg 23465862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 33406841 - 33406805
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||  ||||||||    
T  33406841 aggctttgtttgggagtttggaggggaggggagggga 33406805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 33872263 - 33872219
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||| ||||||||||||||  |||||||| |||||||    
T  33872263 aggctttgtttgcgagtttggaggggaggggaggggagggctttg 33872219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 38342286 - 38342234
Alignment:
Q  202 ctactaaacctatcacgtaacgacactccacccacccaaacatccgtccaaaa 254  Q
    |||||||| ||||||||||||||||   | |||||||||| ||||||||||||    
T  38342286 ctactaaatctatcacgtaacgacaactctcccacccaaatatccgtccaaaa 38342234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 42112774 - 42112802
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  42112774 ttaggctttgtttgggagtttggagggga 42112802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 43189120 - 43189076
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||| ||||| |||| ||| |||||||    
T  43189120 aggctttgtttgggagtttggatgggaagggagaggagggctttg 43189076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 44690126 - 44690082
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||| ||||||||| |||||||||||| |||||||| |||||||    
T  44690126 aggctctgtttgggaatttggaggggaagggaggggagggctttg 44690082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 10295751 - 10295705
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  10295751 ttaggctttgtttgggagtttggaggggaagggaggggagggctttg 10295705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 9684607 - 9684651
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||    
T  9684607 ttaggctttgtttgggagtttggaggggaagggaagggaaggctt 9684651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 18670903 - 18670947
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  18670903 ttaggctttgtttgtgagtttggaggggaagggaggggaaggctt 18670947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 25598585 - 25598623
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  25598585 ttaggctttgtttgggagtttggaggggaagggagggga 25598623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 38120011 - 38120049
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  38120011 ttaggctttgtttgggagtttggaggggaagggagggga 38120049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 17093162 - 17093126
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggg 174  Q
    |||||||||||||||||||||||||||||| ||||||    
T  17093162 ttaggctttgtttgggagtttggaggggaagggaggg 17093126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 25027181 - 25027141
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  25027181 tttgtttgggagtttggaggggaagggaggggagggctttg 25027141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 38302182 - 38302222
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  38302182 tttgtttgggagtttggaggggaagggaggggagggctttg 38302222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 10437857 - 10437900
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||    
T  10437857 taggctttgtttgcgagtttggaggggaagggagaggaaggctt 10437900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 13569260 - 13569303
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||    
T  13569260 taggctttgtttgcgagtttggaggggaagggaggggaatgctt 13569303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 1935275 - 1935237
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  1935275 ttaggctttgtttgcgagtttggaggggaagggagggga 1935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 5772928 - 5772886
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||  ||||||||||||||| ||||||||||||||    
T  5772928 aggctttgtttaagagtttggaggggaagggaggggaaggctt 5772886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 33718445 - 33718399
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggaggggaaggctttgt 185  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||||    
T  33718445 taggctttgtttgggagtttggaggggaagggatgagagggctttgt 33718399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 4648799 - 4648828
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaa 167  Q
    ||||||||||||||||||||||||||||||    
T  4648799 ttaggctttgtttgggagtttggaggggaa 4648828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 39649435 - 39649484
Alignment:
Q  133 aaccgttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||| |||||||||||||| |||||||||||| || |||||| |||||||    
T  39649435 aacccttaggctttgtttgcgagtttggagggcaagggagggaaaggctt 39649484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 12229301 - 12229329
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  12229301 ttaggctttgtttgggagtttggagggga 12229329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 32760632 - 32760660
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  32760632 ttaggctttgtttgggagtttggagggga 32760660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 35700932 - 35700968
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||  ||||||||    
T  35700932 aggctttgtttgggagtttggaggggaggggagggga 35700968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 35701668 - 35701624
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||| ||||||||||||||||||||||||  |||||||| |||||    
T  35701668 ttagactttgtttgggagtttggaggggacgggaggggagggctt 35701624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 35708962 - 35708926
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  35708962 aggctttgtttgtgagtttggaggggaagggagggga 35708926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 38302554 - 38302526
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  38302554 ttaggctttgtttgggagtttggagggga 38302526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 20534192 - 20534146
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  20534192 ttaggctttgtttgggagtttggaggggaagggaggggagggctttg 20534146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 22845048 - 22845094
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  22845048 ttaggctttgtttgggagtttggaggggaagggaggggagggctttg 22845094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 40155557 - 40155605
Alignment:
Q  206 taaacctatcacgtaacgacactccacccacccaaacatccgtccaaaa 254  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  40155557 taaatctatcccgtaacgacacttcacccacccaaacatccgtccaaaa 40155605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 22165582 - 22165628
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||    
T  22165582 ttaggctttgtttgtgagtttggaggggagaggaagggaaggctttg 22165628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 24280176 - 24280130
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  24280176 ttaggctttgtttgggagtttcgaggggaagggaggggaaagctttg 24280130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 31530288 - 31530242
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||    
T  31530288 ttaggctttgtttgagagtttggaggggaagggaggggagggctttg 31530242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 271
Target Start/End: Original strand, 32808188 - 32808234
Alignment:
Q  225 cactccacccacccaaacatccgtccaaaagagagtatttttgccat 271  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||||    
T  32808188 cactccacccatccattcatccgtccaaaagagagtatttttgccat 32808234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 38366291 - 38366245
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||||||| |||| |||||||| |||||||    
T  38366291 ttaggctttgtttgggagtttggagaggaagggaggggagggctttg 38366245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 41844700 - 41844662
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  41844700 ttaggctttgtttgggagtttggaggggaagggagggga 41844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 17622295 - 17622335
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  17622295 tttgtttgggagtttggaggggaagggaggggagggctttg 17622335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 29114445 - 29114401
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||    
T  29114445 ttaggctttgtttgcgagtttggaagggaagggaggggaaggctt 29114401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 32060909 - 32060865
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||    
T  32060909 aggctttgtttgggagtttggagtggaagggaggggagggctttg 32060865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 37756537 - 37756581
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||    
T  37756537 aggctttgtttggaagtttggaggggaagggaggggagggctttg 37756581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 38136652 - 38136696
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| ||| || |||||||||    
T  38136652 aggctttgtttgggagtttggaggggaagggaaggaaaggctttg 38136696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 38137041 - 38137001
Alignment:
Q  142 gctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  38137041 gctttgtttgcgagtttggaggggaagggaggggaaggctt 38137001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 45899547 - 45899511
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggg 174  Q
    |||||||||||||||||||||||||||||| ||||||    
T  45899547 ttaggctttgtttgggagtttggaggggaagggaggg 45899511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 7182402 - 7182364
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  7182402 ttaggctttgtttgggagtttggaggggaggggagggga 7182364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 12709043 - 12709001
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||| ||||||||||||||  ||||||||||||||    
T  12709043 aggctttgtttgcgagtttggaggggattggaggggaaggctt 12709001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 33500392 - 33500434
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||    
T  33500392 aggctttgtttgcgagtttggaagggaagggaggggaaggctt 33500434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 33500786 - 33500740
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| | | || |||||||||    
T  33500786 ttaggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 33500740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 54806345 - 54806383
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  54806345 ttaggctttgtttgggagtttggagaggaagggagggga 54806383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 31340658 - 31340695
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  31340658 taggctttgtttgggagtttggaggggaagggatggga 31340695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 50643083 - 50643042
Alignment:
Q  143 ctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||||||| ||| |||| |||||||    
T  50643083 ctttgtttgggagtttggaggggaagggatgggagggctttg 50643042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 170
Target Start/End: Complemental strand, 904468 - 904436
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaagg 170  Q
    |||||||||||||||||||||||||||| ||||    
T  904468 ttaggctttgtttgggagtttggagggggaagg 904436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 7182009 - 7182041
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||| ||||||||    
T  7182009 tttgtttgggagtttggaggggaagggagggga 7182041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 16318491 - 16318531
Alignment:
Q  142 gctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||| |||||| |||||||| ||||||||||||||    
T  16318491 gctttgtttgcgagttttgaggggaagggaggggaaggctt 16318531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 16422789 - 16422833
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    ||||| |||||||| ||||||||||||||| ||||||||| ||||    
T  16422789 ttaggttttgtttgtgagtttggaggggaagggaggggaaagctt 16422833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 16535950 - 16535910
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||| ||||| |||||||| |||||||    
T  16535950 tttgtttgggagtttggatgggaagggaggggagggctttg 16535910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 24291651 - 24291611
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaag 178  Q
    ||||||||||||||| |||||||||| ||| ||||||||||    
T  24291651 ttaggctttgtttggaagtttggaggtgaagggaggggaag 24291611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 28175675 - 28175631
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    ||||| |||||||| |||||||||| |||| ||||||||||||||    
T  28175675 ttaggttttgtttgcgagtttggagaggaagggaggggaaggctt 28175631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 29114061 - 29114105
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| | | || |||||||||    
T  29114061 aggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 29114105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 31187303 - 31187267
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||  ||||||||    
T  31187303 aggctttgtttgggagtttggaggggacgggagggga 31187267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 32060559 - 32060587
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  32060559 ttaggctttgtttgggagtttggagggga 32060587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 32648822 - 32648858
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  32648822 aggctttgtttgggggtttggaggggaagggagggga 32648858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 36151189 - 36151225
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  36151189 aggctttatttgggagtttggaggggaagggagggga 36151225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 38365901 - 38365937
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||  ||||||||    
T  38365901 aggctttgtttgggagtttggaggggaggggagggga 38365937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 41363630 - 41363674
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||| ||||||||||| ||| |||||||| |||||||    
T  41363630 aggctttgtttgagagtttggaggcgaagggaggggagggctttg 41363674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 41364023 - 41363995
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  41364023 ttaggctttgtttgggagtttggagggga 41363995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 45636725 - 45636685
Alignment:
Q  223 gacactccacccacccaaacatccgtccaaaagagagtatt 263  Q
    |||| ||| |||||||| |||||||||||||||||||||||    
T  45636725 gacattcctcccacccacacatccgtccaaaagagagtatt 45636685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 55510167 - 55510123
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||  |||  |||||||||||    
T  55510167 aggctttgtttgggagtttggaggggaggggaatggaaggctttg 55510123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 13765752 - 13765798
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||    
T  13765752 ttaggctttgtttgggagtttggaggagaaaggaggggagggctttg 13765798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 25955650 - 25955696
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||    
T  25955650 ttaggctttgtttgggagtttggaggggaaagaaggggagggctttg 25955696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 11514914 - 11514958
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  11514914 ttaggctttgtttgcgagtttggaggggaagggaggggaaggctt 11514958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 43572758 - 43572715
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||    
T  43572758 taggctttgtttgcgagtttggaggggaagggaggggaaggctt 43572715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 44137342 - 44137296
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||||    
T  44137342 ttaggctttgtttgggagtttggaggggaagggaagggagggctttg 44137296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 12606199 - 12606114
Alignment:
Q  186 cgacaattgaaataatctactaaacctatcacgtaacgacactccacccacccaaacatccgtccaaaagagagtatttttgccat 271  Q
    |||||| | |||||||||| |||| ||| |||  || || ||||||||||||||||||||| |||| |||||||||| ||| ||||    
T  12606199 cgacaactcaaataatctattaaatctaacactgaaggaaactccacccacccaaacatccttccagaagagagtatatttaccat 12606114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 8990773 - 8990825
Alignment:
Q  132 aaaccgttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||| ||||| |||||||||||||||||||||||| | |||||| |||||||    
T  8990773 aaaccattaggttttgtttgggagtttggaggggaaggaaggggagggctttg 8990825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 14008147 - 14008183
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||| ||||||||    
T  14008147 aggctttgtttgggagtttggaggggaagggagggga 14008183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 18826047 - 18826083
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggg 174  Q
    |||||||||||||||||||||||||||||| ||||||    
T  18826047 ttaggctttgtttgggagtttggaggggaagggaggg 18826083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 21579442 - 21579486
Alignment:
Q  219 taacgacactccacccacccaaacatccgtccaaaagagagtatt 263  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||    
T  21579442 taacgacacaccacccacccaaacatcagtccaaaaaagagtatt 21579486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 6655988 - 6656031
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggct 181  Q
    ||||||||||| || ||||||||||||||| |||||||||||||    
T  6655988 ttaggctttgtctgcgagtttggaggggaagggaggggaaggct 6656031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 173
Target Start/End: Complemental strand, 3039158 - 3039124
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggagg 173  Q
    |||||||||||||||||||||||||||| ||||||    
T  3039158 taggctttgtttgggagtttggaggggagaggagg 3039124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 4003298 - 4003344
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||| |||||||||| |||| |||||||| |||||||    
T  4003298 ttaggctttgtttgtgagtttggagtggaagggaggggagggctttg 4003344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 13018294 - 13018340
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| | | || |||||||||    
T  13018294 ttaggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 13018340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 13018687 - 13018645
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||    
T  13018687 aggctttgtttgcgagtttggaagggaagggaggggaaggctt 13018645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 14008539 - 14008501
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  14008539 ttaggctttctttgggagtttggaggggaagggagggga 14008501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 18018415 - 18018461
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||| ||||||||||||||||||||||||| ||| |||| |||||||    
T  18018415 ttagactttgtttgggagtttggaggggaagggatgggagggctttg 18018461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 31083063 - 31083017
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||  ||| || |||||||||    
T  31083063 ttaggctttgtttgggagtttggaggggaggggaaggaaaggctttg 31083017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 36567094 - 36567140
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||| || ||||||||||||||| |||||||| |||||||    
T  36567094 ttaggctttgtctgtgagtttggaggggaagggaggggagggctttg 36567140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 38294153 - 38294115
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  38294153 ttaggttttgtttgggagtttggaggggaagggagggga 38294115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 40357722 - 40357684
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  40357722 ttaggctttgtttggaagtttggaggggaagggagggga 40357684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 41099931 - 41099977
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||| |||||||| ||  ||||||||||||||||    
T  41099931 ttaggctttgtttgggaatttggaggagaggggaggggaaggctttg 41099977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 43572360 - 43572406
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| | | || |||||||||    
T  43572360 ttaggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 43572406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 16813506 - 16813547
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaagg 179  Q
    |||||||||||||| ||||||||||||||| ||||| |||||    
T  16813506 ttaggctttgtttgcgagtttggaggggaagggaggagaagg 16813547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 16852785 - 16852826
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaagg 179  Q
    |||||||||||||| ||||||||||||||| ||||| |||||    
T  16852785 ttaggctttgtttgcgagtttggaggggaagggaggagaagg 16852826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 32761483 - 32761438
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttgt 185  Q
    |||||||| ||| ||||||||||||||| |||||||| ||||||||    
T  32761483 aggctttgattgcgagtttggaggggaagggaggggagggctttgt 32761438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 4041844 - 4041872
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  4041844 ttaggctttgtttgggagtttggagggga 4041872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 8411137 - 8411109
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  8411137 ttaggctttgtttgggagtttggagggga 8411109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 10165287 - 10165323
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  10165287 aggctttgtttgggagtttggaggggagaggaaggga 10165323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 15803435 - 15803391
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||  ||| || |||||||||    
T  15803435 aggctttgtttgggagtttggaggggaggggaaggaaaggctttg 15803391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 18780254 - 18780290
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||  ||||||||    
T  18780254 aggctttgtttgggagtttggaggggaggggagggga 18780290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 18781684 - 18781640
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    ||||| |||||||| ||||||||||||||| |||||||| |||||    
T  18781684 ttaggttttgtttgagagtttggaggggaagggaggggagggctt 18781640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 44020232 - 44020260
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  44020232 ttaggctttgtttgggagtttggagggga 44020260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 33991807 - 33991761
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  33991807 ttaggctttgtttgggagtttggaggggaagggaggggagggctttg 33991761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 43571785 - 43571831
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  43571785 ttaggctttgtttgggagtttggagaggaagggaggggaaggctttg 43571831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 32300318 - 32300274
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  32300318 aggctttgtttgggagtttggaggggaagggaggggagggctttg 32300274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 36886740 - 36886784
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  36886740 ttaggctttgtttgcgagtttggaggggaagggaggggaaggctt 36886784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 32299366 - 32299323
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggcttt 183  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  32299366 aggctttgtttgggagtttggaggggaagggaggggagggcttt 32299323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 896313 - 896359
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||    
T  896313 ttaggctttgtttgggagtttggaggagaagggaggggagggctttg 896359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 49858519 - 49858469
Alignment:
Q  6 cataagtgaggagaagaaagaactctttctgcttccagggtgcactcttat 56  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||| ||||||    
T  49858519 cataaatgacgagaaaaaagaactctttctgcttccagggtgcaatcttat 49858469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 42161871 - 42161916
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||    
T  42161871 taggctttgtttgggagtttggaggggaagagaggggagggctttg 42161916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 1688035 - 1688079
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||    
T  1688035 aggcgttgtttgggagtttggaggggaagggaggggagggctttg 1688079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 9595824 - 9595788
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||| ||||||||    
T  9595824 aggctttgtttgggagtttggaggggaagggagggga 9595788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 31920172 - 31920208
Alignment:
Q  143 ctttgtttgggagtttggaggggaaaggaggggaagg 179  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31920172 ctttgtttgcgagtttggaggggaaaggaggggaagg 31920208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 34154539 - 34154495
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||    
T  34154539 ttaggctttgtttgcgagtttggaggggaagggaggagaaggctt 34154495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 36269613 - 36269657
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||| |||||||||||||||  |||||||||||||    
T  36269613 ttaggctttgtttgcgagtttggaggggaagtgaggggaaggctt 36269657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 38795228 - 38795192
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||| ||||||||    
T  38795228 aggctttgtttgggagtttggaggggaagggagggga 38795192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 39179315 - 39179279
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||| ||||||||    
T  39179315 aggctttgtttgggagtttggaggggaagggagggga 39179279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 1523860 - 1523822
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  1523860 ttaggctttgtttgggagtttggaggggaatggatggga 1523822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 15464076 - 15464038
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  15464076 ttaggctttgtttgggagtttgaaggggaagggagggga 15464038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 23871279 - 23871325
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||| ||||||||||||||| || |||||||| |||||||    
T  23871279 ttaggctttgtctgggagtttggagggaaagggaggggagggctttg 23871325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 37649432 - 37649478
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| | | || |||||||||    
T  37649432 ttaggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 37649478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 37649825 - 37649783
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||| ||||||||||||||| ||||| ||||||||    
T  37649825 aggctttgtttgcgagtttggaggggaatggaggagaaggctt 37649783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 41432578 - 41432624
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||||| |||  | |||||||||    
T  41432578 ttaggctttgtttgggagtttggaggggaagggaaagaaaggctttg 41432624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 50247861 - 50247823
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  50247861 ttaggctttctttgggagtttggaggggaagggagggga 50247823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 50403007 - 50402961
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||||||||| || |||| ||| |||||||    
T  50403007 ttaggctttgtttgggagtttggagggtaagggagaggagggctttg 50402961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 13255615 - 13255562
Alignment:
Q  131 caaaccgttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||| || ||||||||| ||||||||||||| ||| |||||||| |||||||    
T  13255615 caaacccttgggctttgttggggagtttggaggagaagggaggggagggctttg 13255562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 29091957 - 29091998
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaagg 179  Q
    |||||||||||||| |||||||||| |||| |||||||||||    
T  29091957 ttaggctttgtttgcgagtttggagaggaagggaggggaagg 29091998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 40136480 - 40136435
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggcttt 183  Q
    |||||||||||||| ||||||||||||||| | | |||||||||||    
T  40136480 ttaggctttgtttgcgagtttggaggggaaggaaagggaaggcttt 40136435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 166
Target Start/End: Complemental strand, 51246775 - 51246746
Alignment:
Q  137 gttaggctttgtttgggagtttggagggga 166  Q
    ||||||||||||||||||||||||||||||    
T  51246775 gttaggctttgtttgggagtttggagggga 51246746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 1278349 - 1278377
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  1278349 ttaggctttgtttgggagtttggagggga 1278377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 2654527 - 2654567
Alignment:
Q  223 gacactccacccacccaaacatccgtccaaaagagagtatt 263  Q
    |||| ||| |||||||| |||||||||||||||||||||||    
T  2654527 gacattcctcccacccacacatccgtccaaaagagagtatt 2654567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 2909380 - 2909336
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| | | || |||||||||    
T  2909380 aggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 2909336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 2925755 - 2925791
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  2925755 aggctttgtttgggagtttgaaggggaagggagggga 2925791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 4204597 - 4204641
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||||||||||  ||  |||||||||||    
T  4204597 aggctttgtttgggagtttggaggggaatagaatggaaggctttg 4204641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 7401388 - 7401428
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||||||  ||||||| |||||||    
T  7401388 tttgtttgggagtttggaggggaagagaggggagggctttg 7401428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 8156545 - 8156517
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  8156545 ttaggctttgtttgggagtttggagggga 8156517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 17556540 - 17556576
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  17556540 aggctttgtttgcgagtttggaggggaagggagggga 17556576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 26940478 - 26940514
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||| |||||||||||||| |||||||||    
T  26940478 aggctttgtttgagagtttggaggggagaggagggga 26940514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 27500247 - 27500203
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||| |||||||||||||||||| |||| |||||||| |||||||    
T  27500247 aggcattgtttgggagtttggagaggaagggaggggagggctttg 27500203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 45565392 - 45565356
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  45565392 aggctttgtttgcgagtttggaggggaagggagggga 45565356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 49479281 - 49479253
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  49479281 ttaggctttgtttgggagtttggagggga 49479253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 50476421 - 50476449
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  50476421 ttaggctttgtttgggagtttggagggga 50476449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 52068347 - 52068307
Alignment:
Q  142 gctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||  ||||||||||||||| ||||||||||||||    
T  52068347 gctttgtttccgagtttggaggggaatggaggggaaggctt 52068307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 52073657 - 52073621
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  52073657 aggctttgtttgcgagtttggaggggaagggagggga 52073621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 52249581 - 52249541
Alignment:
Q  223 gacactccacccacccaaacatccgtccaaaagagagtatt 263  Q
    |||| ||| ||||||| ||||||||||||||||||||||||    
T  52249581 gacattcctcccacccgaacatccgtccaaaagagagtatt 52249541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 29241649 - 29241694
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggcttt 183  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||    
T  29241649 ttaggctttgtttgggagtttggaggggaagggaggggagggcttt 29241694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 4909698 - 4909742
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| ||||| || |||||||    
T  4909698 aggctttgtttgggagtttggaggggaagggaggcgagggctttg 4909742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 24734757 - 24734793
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggg 174  Q
    |||||||||||||||||||||||||||||| ||||||    
T  24734757 ttaggctttgtttgggagtttggaggggaagggaggg 24734793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 32719582 - 32719543
Alignment:
Q  142 gctttgtttgggagtttggaggggaaaggaggggaaggct 181  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  32719582 gctttgtttgcgagtttggaggggaagggaggggaaggct 32719543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 1567157 - 1567195
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  1567157 tttgtttgcgagtttggaggggaagggaggggaaggctt 1567195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 2365808 - 2365770
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  2365808 ttaggctttgtttgggagtttggaggggaggggagggga 2365770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 174
Target Start/End: Complemental strand, 5825595 - 5825561
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggg 174  Q
    |||||||||||||||||||||||||||| ||||||    
T  5825595 aggctttgtttgggagtttggaggggaagggaggg 5825561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 23094945 - 23094983
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  23094945 ttaggctttgtttgggagtttggagtggaagggagggga 23094983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 6855505 - 6855549
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    ||||| |||||||| ||||||||| ||||| ||||||||||||||    
T  6855505 ttaggttttgtttgtgagtttggaagggaagggaggggaaggctt 6855549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 26713735 - 26713771
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  26713735 aggctttgtttgcgagtttggaggggaagggagggga 26713771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 28551723 - 28551751
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  28551723 ttaggctttgtttgggagtttggagggga 28551751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 31345187 - 31345223
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  31345187 aggctttgtttgggagtttggaagggaacggagggga 31345223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 31345581 - 31345553
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  31345581 ttaggctttgtttgggagtttggagggga 31345553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 32533827 - 32533879
Alignment:
Q  202 ctactaaacctatcacgtaacgacactccacccacccaaacatccgtccaaaa 254  Q
    |||||||| ||||||||||||||||   | |||||||||||||||| ||||||    
T  32533827 ctactaaatctatcacgtaacgacaactctcccacccaaacatccgaccaaaa 32533879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 33590537 - 33590497
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggaggggaagg 179  Q
    ||||||||||||| ||||||||||||||| |||| ||||||    
T  33590537 taggctttgtttgcgagtttggaggggaatggagtggaagg 33590497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 14581958 - 14581914
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||    
T  14581958 ttaggctttgtttgcgagtttgcaggggaaaggaggggaaggctt 14581914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 36906452 - 36906408
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  36906452 aggctttgtttgggagtttggaggggaagggaggggagggctttg 36906408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 79823 - 79781
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  79823 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 79781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 1941866 - 1941904
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  1941866 ttaggctttgtttgggagtttggaggggaagggagggga 1941904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 33230864 - 33230908
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| ||||| || |||||||    
T  33230864 aggctttgtttgggagtttggaggggaagggaggagagggctttg 33230908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 34148398 - 34148434
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||| ||||||||    
T  34148398 aggctttgtttgggagtttggaggggaagggagggga 34148434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 34349974 - 34349934
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  34349974 tttgtttgggagtttggaggggaaggaaggggaaggctttg 34349934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 23932767 - 23932724
Alignment:
Q  139 taggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||    
T  23932767 taggctttgtttgcgagtttggaggggaagggaagggaaggctt 23932724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 25033645 - 25033598
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttgt 185  Q
    ||||| |||||||||||||||||||||||| |||||||| ||| ||||    
T  25033645 ttaggttttgtttgggagtttggaggggaagggaggggagggcattgt 25033598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 1839636 - 1839682
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||| ||||||||||||||| ||| || |||||||||    
T  1839636 ttaggctttgtttgcgagtttggaggggaagggaaggaaaggctttg 1839682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 34272384 - 34272422
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  34272384 ttaggctttgtttgggagtttgaaggggaagggagggga 34272422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 13864908 - 13864953
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggcttt 183  Q
    ||||||||||||||  |||||||| |||||||||||||| ||||||    
T  13864908 ttaggctttgtttgaaagtttggatgggaaaggaggggagggcttt 13864953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 27030031 - 27030072
Alignment:
Q  142 gctttgtttgggagtttggaggggaaaggaggggaaggcttt 183  Q
    ||||||||||||||||| ||||| || |||||||||||||||    
T  27030031 gctttgtttgggagttttgagggaaagggaggggaaggcttt 27030072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 1111059 - 1111099
Alignment:
Q  144 tttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||| ||| |||| |||||||    
T  1111059 tttgtttgggagtttggaggggaagggaagggagggctttg 1111099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 1942241 - 1942205
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  1942241 aggctttgtttaggagtttggaggggaagggagggga 1942205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 3404782 - 3404746
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggagggga 176  Q
    |||||||||||||||||||||||||||  ||||||||    
T  3404782 aggctttgtttgggagtttggaggggaggggagggga 3404746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 26772852 - 26772808
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||| |||||||||||| || |||| |||||||||    
T  26772852 ttaggctttgtttgcgagtttggagggaaagggagaggaaggctt 26772808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 29611872 - 29611900
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  29611872 ttaggctttgtttgggagtttggagggga 29611900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 36906062 - 36906090
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  36906062 ttaggctttgtttgggagtttggagggga 36906090  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 37659351 - 37659395
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||| || |||||||||||| |||||||| |||||||    
T  37659351 aggctttgtttgagaatttggaggggaagggaggggagggctttg 37659395  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 43775554 - 43775506
Alignment:
Q  223 gacactccacccacccaaacatccgtccaaaagagagtatttttgccat 271  Q
    ||||| |||||||||||| |||||| |||||| ||||||||||| ||||    
T  43775554 gacacaccacccacccaagcatccgaccaaaaaagagtatttttaccat 43775506  T

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Target: scaffold0717 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 1844 - 1798
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||    
T  1844 ttaggctttgtttgagagtttggaggggaagggaggggagggctttg 1798  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 59670 - 59711
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaagg 179  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  59670 ttaggctttgtttgggagtttggaggggaggggaggggaagg 59711  T

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Target: scaffold0051 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 6969 - 6929
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaag 178  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  6969 ttaggctttgtttgcgagtttggaggggaagggaggggaag 6929  T

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Target: scaffold0051; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 7952 - 7912
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaag 178  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  7952 ttaggctttgtttgcgagtttggaggggaagggaggggaag 7912  T

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Target: scaffold1562 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 405 - 359
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||| ||||||||| ||||||||||||||| |||||||| |||||||    
T  405 ttagactttgtttgagagtttggaggggaagggaggggagggctttg 359  T

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Target: scaffold1158 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 2188 - 2234
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||| ||||||||| ||||||||||||||| |||||||| |||||||    
T  2188 ttagactttgtttgagagtttggaggggaagggaggggagggctttg 2234  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 3485 - 3531
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    ||||||||||||||||||||||||||||||  || |||| |||||||    
T  3485 ttaggctttgtttgggagtttggaggggaagagatgggagggctttg 3531  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 2231 - 2189
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    ||||||||||||  |||||||||||||| ||||||||||||||    
T  2231 aggctttgtttgcaagtttggaggggaagggaggggaaggctt 2189  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 93311 - 93340
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaa 167  Q
    ||||||||||||||||||||||||||||||    
T  93311 ttaggctttgtttgggagtttggaggggaa 93340  T

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Target: scaffold0636 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 8654 - 8610
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||| |||||||||||||  ||||||| |||||||    
T  8654 aggctttgtttgggggtttggaggggaagagaggggagggctttg 8610  T

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Target: scaffold0248 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 403 - 363
Alignment:
Q  142 gctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||| ||||||||||||||| ||||||||| ||||    
T  403 gctttgtttgcgagtttggaggggaagggaggggaaagctt 363  T

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Target: scaffold0245 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 4026 - 4054
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  4026 ttaggctttgtttgggagtttggagggga 4054  T

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Target: scaffold0229 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 4357 - 4385
Alignment:
Q  138 ttaggctttgtttgggagtttggagggga 166  Q
    |||||||||||||||||||||||||||||    
T  4357 ttaggctttgtttgggagtttggagggga 4385  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 26249 - 26293
Alignment:
Q  138 ttaggctttgtttgggagtttggaggggaaaggaggggaaggctt 182  Q
    |||||||||||||  ||||||| ||||||| ||||||||||||||    
T  26249 ttaggctttgtttacgagtttgaaggggaagggaggggaaggctt 26293  T

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Target: scaffold0128; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 26644 - 26600
Alignment:
Q  140 aggctttgtttgggagtttggaggggaaaggaggggaaggctttg 184  Q
    |||||||||||||||||||||||||||| | | || |||||||||    
T  26644 aggctttgtttgggagtttggaggggaaggaaaggaaaggctttg 26600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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