View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4877-Insertion-4 (Length: 222)
Name: NF4877-Insertion-4
Description: NF4877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4877-Insertion-4 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 10563564 - 10563349
Alignment:
| Q |
7 |
aaatagtgcaatgctcctaccaaaaccaggttcggttctcacatcacattaactcaagcacattaaaatccttcaaaatattattctaccatatattcaa |
106 |
Q |
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| T |
10563564 |
aaataatgcaatgctcctaccaaaaccaggttcggttctcacatcacattaactcaagcacattaaaatccttcaaaatattattctaccatatattcaa |
10563465 |
T |
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| Q |
107 |
ctattattattctaccatacattcaactattcaagtgtttgaactttgaagtccaatctaattaaaatccttaaccgtgtagtacttgcatgcttacttc |
206 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10563464 |
ctattattattctaccatacattcaactaatcaagtgtttgaactttgaagtccaatctaattaaaatccttaaccgtgtagtacttgcatgcttacttc |
10563365 |
T |
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| Q |
207 |
aatttcagcataacag |
222 |
Q |
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|||||||||||||||| |
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| T |
10563364 |
aatttcagcataacag |
10563349 |
T |
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