View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4877_low_1 (Length: 446)

Name: NF4877_low_1
Description: NF4877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4877_low_1
NF4877_low_1
[»] chr2 (4 HSPs)
chr2 (7-285)||(9708153-9708431)
chr2 (11-285)||(15830138-15830412)
chr2 (7-273)||(36207595-36207863)
chr2 (51-126)||(4646818-4646893)
[»] chr7 (6 HSPs)
chr7 (7-285)||(14103101-14103377)
chr7 (7-285)||(14413118-14413394)
chr7 (7-285)||(26832157-26832438)
chr7 (7-273)||(36898028-36898296)
chr7 (7-137)||(15753003-15753133)
chr7 (221-273)||(15752861-15752913)
[»] scaffold0340 (1 HSPs)
scaffold0340 (7-273)||(1934-2200)
[»] chr4 (5 HSPs)
chr4 (11-285)||(1614465-1614739)
chr4 (7-273)||(56443764-56444030)
chr4 (7-285)||(55083050-55083311)
chr4 (31-273)||(48083585-48083827)
chr4 (7-198)||(42259562-42259753)
[»] chr3 (10 HSPs)
chr3 (7-284)||(54627308-54627584)
chr3 (7-271)||(32750968-32751232)
chr3 (7-285)||(20819846-20820127)
chr3 (7-273)||(24782359-24782622)
chr3 (7-285)||(35235467-35235745)
chr3 (7-285)||(40065771-40066049)
chr3 (7-285)||(54602408-54602681)
chr3 (7-136)||(35234489-35234618)
chr3 (51-128)||(40009555-40009632)
chr3 (206-273)||(35234376-35234442)
[»] chr1 (10 HSPs)
chr1 (7-282)||(16834647-16834922)
chr1 (7-274)||(19075938-19076205)
chr1 (7-274)||(19123828-19124095)
chr1 (7-285)||(44431812-44432090)
chr1 (7-285)||(25377359-25377638)
chr1 (59-273)||(46294758-46294973)
chr1 (7-273)||(21246733-21246994)
chr1 (7-79)||(1799048-1799120)
chr1 (151-273)||(1799129-1799252)
chr1 (7-69)||(23703305-23703367)
[»] chr5 (4 HSPs)
chr5 (7-273)||(5574601-5574866)
chr5 (7-273)||(17647569-17647835)
chr5 (7-263)||(26359422-26359678)
chr5 (8-273)||(6914406-6914670)
[»] chr8 (6 HSPs)
chr8 (7-273)||(26457-26726)
chr8 (7-285)||(20832337-20832613)
chr8 (7-284)||(15564804-15565083)
chr8 (7-285)||(25630795-25631073)
chr8 (7-270)||(12502722-12502991)
chr8 (7-89)||(25094414-25094496)
[»] chr6 (4 HSPs)
chr6 (7-285)||(11099214-11099493)
chr6 (7-252)||(28537808-28538052)
chr6 (7-137)||(1563178-1563308)
chr6 (206-273)||(1563380-1563450)
[»] scaffold0113 (1 HSPs)
scaffold0113 (7-58)||(12758-12809)


Alignment Details
Target: chr2 (Bit Score: 182; Significance: 3e-98; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 7 - 285
Target Start/End: Original strand, 9708153 - 9708431
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9708153 atacaaccatatattgacagtattgtagaacaaattgacaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 9708252  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| |||||||||||||||||||||       |    
T  9708253 aagtatttctttgttccaacatcagatgttgttttttctttttcaagttgtccttaaccccattagagatcaaaaggatggtggctatcatgttttttta 9708352  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||  ||||||||||    
T  9708353 ttctcttaaaaaaacataatgaaatatacataatataatattattaccattcctttgaatcctaacgggggaagaagac 9708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 15830138 - 15830412
Alignment:
Q  11 aaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataaaagt 110  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  15830138 aaccatatattgacagtattgtagaacaaattggcagtatttggtaaaccctacaataatgttcaaaattcaagaatatttacaaaacaaacataaaagt 15830237  T
Q  111 atttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnnattct 210  Q
    |||||||||||||||||||||||||||            ||||||||||||||||||||||||||| ||||||||| |||||||||||       |||||    
T  15830238 atttctttgttccaacatcagatgttgttttttctttttcaagttgtccttaaccccattagagatcaaaaggatgatggctatcatgtttttttattct 15830337  T
Q  211 cttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||  ||||||||||    
T  15830338 cttaaaaaaacataatgaaatatacataatataatattattaccattcctttgaatcctaacgggggaagaagac 15830412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 36207863 - 36207595
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||| ||||||||| || ||| |||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36207863 atacaatcatatattggcagtatggtagaacaaattcgcagtatttggcaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 36207764  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatg--nnnnnn 204  Q
    ||| ||||||||||||||||||| |||||||            |||||||| ||| |||||||||||||| |||||||||||||||||||||            
T  36207763 aagcatttctttgttccaacatcggatgttgttttttcattttcaagttgttcttcaccccattagagatcaaaaggatggtggctatcatgtttttttt 36207664  T
Q  205 nattctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
     |||||||||||||| |||||||||||||| |||||||| |||||||| ||||| |||||||| |||||    
T  36207663 tattctcttaaaaaaacataatgaaatatagataatataatattattaccattcctttgaatcataacg 36207595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 4646893 - 4646818
Alignment:
Q  51 ttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataaaagtatttctttgttccaac 126  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| | |||||||| |||||||    
T  4646893 ttggtaaaccctacaataatgtttaaaactcaaaaatatttacaaaacaaacataaacgcatttctttattccaac 4646818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 5e-94; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 7 - 285
Target Start/End: Original strand, 14103101 - 14103377
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14103101 atacaaccatatattgacaatattgtagaacaaattggcagtattttgtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 14103200  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| |||| ||||||||||||||||       |    
T  14103201 aagtatttctttgttccaacatcagatgttgttttttcttttgcaagttgtccttaaccccattagagatcaaaatgatggtggctatcatgttttttta 14103300  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||    
T  14103301 ttctcttaaaaa--cataatgaaatatacataatataatattattatcattcctttgaatcctaacgggggaagaagac 14103377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 7 - 285
Target Start/End: Original strand, 14413118 - 14413394
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14413118 atacaaccatatattgacaatattgtagaacaaattggcagtattctgtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 14413217  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| |||| ||||||||||||||||       |    
T  14413218 aagtatttctttgttccaacatcagatgttgttttttcttttgcaagttgtccttaaccccattagagatcaaaatgatggtggctatcatgttttttta 14413317  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||    
T  14413318 ttctcttaaaaa--cataatgaaatatacataatataatattattatcattcctttgaatcctaacgggggaagaagac 14413394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 26832438 - 26832157
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  26832438 atacaaccatatattgacagtattgtagaacaaattggcagtatttgataaaccctacaataattttcaaaactcaagaatatttacaaaacaaacataa 26832339  T
Q  107 aagtatttctttgttccaacatcagatgttg-nnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnn 205  Q
    |||||||||||||||||||||||||||||||              |||||||||||||||||||||||||| |||||||||||||||||||||           
T  26832338 aagtatttctttgttccaacatcagatgttgtttttttcttttttaagttgtccttaaccccattagagatcaaaaggatggtggctatcatgttttttt 26832239  T
Q  206 attctctt--aaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||||  ||||||  ||||||||||||||||||||||  |||||||  |||| ||||||||||||||  ||||||||||    
T  26832238 attctcttaaaaaaaaatataatgaaatatacataatataaaattattacaattcctttgaatcctaacgggggaagaagac 26832157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 36898296 - 36898028
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  36898296 atacaaccatatattgacagtattgtagaagaaattggcagtatttggtaaaccctacaataatgttcaaaactcaagaatattaacaaaacaaacataa 36898197  T
Q  107 aagtatttctttgttccaacatcagatgttg-nnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnn 205  Q
    |||||||||||||||||||||||| ||||||             |||||| |||||||||||||||||||| ||| |||| ||||||||||||           
T  36898196 aagtatttctttgttccaacatcaaatgttgtttttttctttttcaagttatccttaaccccattagagatcaaagggattgtggctatcatgttttttt 36898097  T
Q  206 attctctt-aaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    |||||||| |||||| ||||||||||||||||||||||| |||||| | ||||| ||||||||||||||    
T  36898096 attctcttaaaaaaaacataatgaaatatacataatataatattatcaacattcctttgaatcctaacg 36898028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 15753133 - 15753003
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||  | ||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  15753133 atacaaccatatattggaagtatggtagaacaaattgacagtattttgtaaaccctacaataatgttcaaaactcaagaatagttacaaaacaaacataa 15753034  T
Q  107 aagtatttctttgttccaacatcagatgttg 137  Q
    ||| |||||||||||||||||||||||||||    
T  15753033 aagcatttctttgttccaacatcagatgttg 15753003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 15752913 - 15752861
Alignment:
Q  221 cataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    |||||||||||||| |||||||| |||||||| || || ||| ||||||||||    
T  15752913 cataatgaaatataaataatataatattattaccactcctttcaatcctaacg 15752861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 2200 - 1934
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2200 atacaaccatatattgacagtattgtagaacaaattggcagtatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 2101  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| |||||||||||||||||||||       |    
T  2100 aagtatttctttgttccaacatcagatgttgctttttctttttcaagttgtccttaaccccattagagatcaaaaggatggtggctatcatgttttttta 2001  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||    
T  2000 ttctcttaaaaaaacataatgaaatatacatcatataatattattaccattcctttgaatcctaacg 1934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 2e-93; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 1614739 - 1614465
Alignment:
Q  11 aaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataaaagt 110  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1614739 aaccatatattgacaatattgtagaacaaattggcagtatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataaaagt 1614640  T
Q  111 atttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnnattct 210  Q
    | |||||||||||||||||||||||||            ||||||||||||||||||||||||||| |||||||||||||||||||||       |||||    
T  1614639 aattctttgttccaacatcagatgttgttttttctttttcaagttgtccttaaccccattagagatcaaaaggatggtggctatcatgtttttttattct 1614540  T
Q  211 cttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||||| |||||||||||||| |||||||| |||||||| ||||| ||||||||||||||  ||||||||||    
T  1614539 cttaaaaaaacataatgaaatatatataatataatattattaccattcctttgaatcctaacgggggaagaagac 1614465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 56444030 - 56443764
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  56444030 atacaaccatatattgacaatattgtagaacaaattggcagtatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 56443931  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||| ||||||||||||||||||||||            |||| ||||||||||||| |||||||| |||| |||||||| |||||||       |    
T  56443930 aagtatttttttgttccaacatcagatgttgttttttctttttcaagctgtccttaaccccgttagagataaaaaagatggtggttatcatgttttttta 56443831  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||| ||||| ||||||||||||||    
T  56443830 ttctcttaaaaaaacataatgaaatatacataatataattttattaccattcctttgaatcctaacg 56443764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 55083311 - 55083050
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55083311 atacaaccatatattgacaatattgtagaacaaattagcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 55083212  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||| ||||||||||||||||| |||||||||||||||||                
T  55083211 aagtatttctttgttccaacatcagatgttgttttttctttttcaagttgtctttaaccccattagagatcaaaaggatggtggctat------------ 55083124  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
         | |||||| ||||||||||||||||||||||| |||||||| | ||| ||||||||||||||  ||||||||||    
T  55083123 -----taaaaaaaacataatgaaatatacataatataatattattacctttcctttgaatcctaacgggggaagaagac 55083050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 48083827 - 48083585
Alignment:
Q  31 gtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataaaagtatttctttgttccaacatca 130  Q
    ||||||||||||| || |||||| |||||||||| |||||||||||||||||||||||||||||||||| | ||||||  |||||||||||||||||| |    
T  48083827 gtagaacaaattgacagtatttgataaaccctacgataatgttcaaaactcaagaatatttacaaaacaaatataaaaacatttctttgttccaacatta 48083728  T
Q  131 gatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnnattctcttaaaaaagcataatgaaa 230  Q
    |||||||            |||||||||||| | |||||||||||| |||||| ||||||||||||||       |||||||||||||| ||||||||||    
T  48083727 gatgttgccttttctttttcaagttgtccttcatcccattagagatcaaaaggttggtggctatcatgtttttttattctcttaaaaaaacataatgaaa 48083628  T
Q  231 tatacataatatattattattatcattcttttgaatcctaacg 273  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||    
T  48083627 tatacataatataatattattactattcctttcaatcctaacg 48083585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 42259562 - 42259753
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||| ||||||||  || ||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  42259562 atacaatcatatatttgcagtatagtagaacaaattggcaatatttggtaaacccaacactaatgttcaaaactcaagaatatttacaaaacaaacataa 42259661  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatg 198  Q
    ||  |||| |||||| |||||||||||||||            |||||||||||  |||||||||||||| ||||||||||||| |||||||    
T  42259662 aaacatttttttgtttcaacatcagatgttgttttttctttttcaagttgtcctccaccccattagagatcaaaaggatggtggttatcatg 42259753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 7e-93; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 7 - 284
Target Start/End: Original strand, 54627308 - 54627584
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  54627308 atacaaccatatattgacaatattgtagaacaaattggcaatatttagtaaaccctacaataatgttaaaaactcaagaatatttacaaaacaaacataa 54627407  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| ||||||||||||||||||||        |    
T  54627408 aagtatttctttgttccaacatcagatgttgttttttctttttcaagttgtccttaaccccattagagatcaaaaggatggtggctatcatattttttta 54627507  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaaga 284  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||  |||||||||    
T  54627508 ttctcttaaaaaa-cataatgaaatatacataatataatattattaccattcctttgaatcctaacgggggaagaaga 54627584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 7 - 271
Target Start/End: Original strand, 32750968 - 32751232
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  32750968 atacaaccatatattgacagtattgtagaacaaattggcagtatttggtaaaccctacaataatgttcaaaactcaacaatatttacaaaacaaacataa 32751067  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||             |||||||||||||||||||||||||| |||||||||||||||||||||       |    
T  32751068 aagtatttctttgttccaacatcagatgttgttttttcttttttaagttgtccttaaccccattagagatcaaaaggatggtggctatcatgttttttta 32751167  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaa 271  Q
    ||||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  32751168 ttctcttaaaaaaacaaaatgaaatatacataatataatattattaccattcctttgaatcctaa 32751232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 20820127 - 20819846
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20820127 atacaaccatatattgacagtattgtagaacaaattgacagtatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 20820028  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||| ||||||||||||||||||||||||||            |||||||| ||||||||| |||||||| ||||||||| |||||||||||       |    
T  20820027 aagtgtttctttgttccaacatcagatgttgttttccctttttcaagttgttcttaaccccgttagagatcaaaaggatgatggctatcatgttttttta 20819928  T
Q  207 ttctctt---aaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
     ||||||   |||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||  ||||||||||    
T  20819927 ctctcttaaaaaaaaaacataatgaaatatacataatataatattattaccattcctttgaatcctaacgggggaagaagac 20819846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 24782359 - 24782622
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  24782359 atacaaccatatattgacagtattgtagaacaaattggcagtatttggtaaaccctacaataatgttcaaaactcaagaatctttacaaaacaaacataa 24782458  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    ||||||||||||||||||||||||| ||||             ||||||||||||||| ||||||||||| |||| |||||||||||||||        |    
T  24782459 aagtatttctttgttccaacatcagttgtt---ttttctttttcaagttgtccttaacgccattagagatcaaaatgatggtggctatcatattttttta 24782555  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    |||| |||||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  24782556 ttcttttaaaaaaacataatgaaatttacataatataatattattaccattcttttgaatcctaacg 24782622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 35235745 - 35235467
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||| ||||| |||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||    
T  35235745 atacaatcatatcttgacagtattatagaacaaattggcagtatttggtataccctacaataatgttcaaaactcaagaatatttacaaaacaaacttaa 35235646  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||| ||||||| ||||||||||            ||||||||||| ||||||||||||||| |||| ||||||||||||||||       |    
T  35235645 aagtatttctttcttccaacttcagatgttgttttttctttttcaagttgtcctgaaccccattagagatcaaaaagatggtggctatcatgttttttta 35235546  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||| ||||| ||||||||||||||  ||||||||||    
T  35235545 ttctcttaaaaaaacataatgaaatatacataatataattttattaccattcatttgaatcctaacgggggaagaagac 35235467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 7 - 285
Target Start/End: Original strand, 40065771 - 40066049
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40065771 atacaaccatatattgaccgtattgtagaataaattggcagtatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 40065870  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatg-nnnnnnn 205  Q
    |||||||| ||||||||||||||||||||||            ||||||||||||||||||||||||||| |||| ||||||||||||||||            
T  40065871 aagtatttgtttgttccaacatcagatgttgttttttctttttcaagttgtccttaaccccattagagatcaaaaagatggtggctatcatgtttttttt 40065970  T
Q  206 attctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||||||||||  | |||||||||||||||||||| | |||||| ||||  ||||||||||||||  ||||||||||    
T  40065971 attctcttaaaaaaaga-aatgaaatatacataatataattttattaccatttctttgaatcctaacgggggaagaagac 40066049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 7 - 285
Target Start/End: Original strand, 54602408 - 54602681
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  54602408 atacaaccatatattgacagtattgtagaacaaattggcagtatttggtaaatcctacaataatgttcaaatctcaaaaatatttacaaaacaaacataa 54602507  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    ||||||||||||||||||||     ||||||            |||||||| |||||||||||||||||| |||||||||||||||||||||       |    
T  54602508 aagtatttctttgttccaac-----atgttgttttttctttttcaagttgttcttaaccccattagagatcaaaaggatggtggctatcatgttttttta 54602602  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||  |||||||||| |||  ||||||||||    
T  54602603 ttctcttaaaaaaacataatgaaatatacataatataatattattaccatttctttgaatccttacgggggaagaagac 54602681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 35234618 - 35234489
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||| ||||||||| || ||| || ||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||    
T  35234618 atacaatcatatattggcattatggtcgaacaaattggcagtattttgtaaaccctacaataatgttcaaaactcaagagtatttacaaaacaaacacaa 35234519  T
Q  107 aagtatttctttgttccaacatcagatgtt 136  Q
    ||| ||||||||||||||||||||||||||    
T  35234518 aagcatttctttgttccaacatcagatgtt 35234489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 40009555 - 40009632
Alignment:
Q  51 ttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataaaagtatttctttgttccaacat 128  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| | |||| ||| |||||||||    
T  40009555 ttggtaaatcctacaataatgttcacaactcaagaatatttacaaaacaaacataaatgcatttatttattccaacat 40009632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 35234442 - 35234376
Alignment:
Q  206 attctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    ||||||||||||||  |||||||| ||||||||||||| |||||||| ||||| ||||||||||||||    
T  35234442 attctcttaaaaaaa-ataatgaactatacataatataatattattaccattcatttgaatcctaacg 35234376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 7e-87; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 7 - 282
Target Start/End: Original strand, 16834647 - 16834922
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  16834647 atacaaccatatattgacagtattgttgaacaaataggcactatttggtaaaccctacaataatgttcaaaactcaaaaatatttacaaaacaaacataa 16834746  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| ||||||||||||||||| |||       |    
T  16834747 aagtatttctttgttccaacatcagatgttgttttttctttttcaagttgtccttaaccccattagagatcaaaaggatggtggctataatgttttttta 16834846  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaa 282  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||  |||||||    
T  16834847 ttctcttaaaaaaacataatgaaatatacataatataatattattaccattcctttgaatcctaacgggggaagaa 16834922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 7 - 274
Target Start/End: Complemental strand, 19076205 - 19075938
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19076205 atacaaccatatattgacagtattgtagaacaaattggcaggatttagtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 19076106  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||| |||||| |||||||||| |||||||||||||||||||||       |    
T  19076105 aagtatttctttgttccaacatcagatgttgttttttctttttcaagttgtcattaaccacattagagatcaaaaggatggtggctatcatgttttttta 19076006  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacga 274  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||    
T  19076005 ttctcataaaaaaacataatgaaatatacataatataatattattaccattcctttgaatcctaacga 19075938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 7 - 274
Target Start/End: Complemental strand, 19124095 - 19123828
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19124095 atacaaccatatattgacagtattgtagaacaaattggcaggatttagtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 19123996  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||| |||||| |||||||||| |||||||||||||||||||||       |    
T  19123995 aagtatttctttgttccaacatcagatgttgttttttctttttcaagttgtcattaaccacattagagatcaaaaggatggtggctatcatgttttttta 19123896  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacga 274  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||    
T  19123895 ttctcataaaaaaacataatgaaatatacataatataatattattaccattcctttgaatcctaacga 19123828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 44432090 - 44431812
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  44432090 atacaaccatatattgatagtattgtagaacaaattggcagtatttggtaaatcctacaataatattcaaaattcaagaatatttacaaaacaaacataa 44431991  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    ||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||| |||||||||||||||||||||       |    
T  44431990 aagtatttctttgttccaacatcagatgttattttttctttttcaagttgtccttaaccccattagagatcaaaaggatggtggctatcatgttttttta 44431891  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    |||||||||||||  |||||||||||||||||||||| |||||||| ||||| |||||||| |||||  ||||||||||    
T  44431890 ttctcttaaaaaaatataatgaaatatacataatataatattattaccattcctttgaatcgtaacgggggaagaagac 44431812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 25377638 - 25377359
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||| ||||||||| || ||| |||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  25377638 atacaatcatatattggcagtatggtagaataaattgacaatatttgataaaccctacaataatattcaaaactcaagaatatttacaaaataaacataa 25377539  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    ||| | |||||||||||||||||||||||||            ||||||||| |||||| |||||||||| ||||||||||||||||||||        |    
T  25377538 aagcacttctttgttccaacatcagatgttgttttttctttttcaagttgtcattaacctcattagagatcaaaaggatggtggctatcatattttttta 25377439  T
Q  207 ttctctt-aaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||| ||||||  |||||||||| ||||||||||| ||||||||  |||||||||||||||||||| ||||||||||    
T  25377438 ttctcttaaaaaaaatataatgaaatctacataatataatattattacaattcttttgaatcctaacgagggaagaagac 25377359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 59 - 273
Target Start/End: Original strand, 46294758 - 46294973
Alignment:
Q  59 ccctacaataatgttcaaaactcaagaatatttacaaaacagacataaaagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtc 158  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||            |||||||||    
T  46294758 ccctacaataatgttcaaaactcaagaatatctacaaaacaaacataaaagtatttctttgttccaacatcagatgttgttttttctttttcaagttgtc 46294857  T
Q  159 cttaaccccattagagattaaaaggatggtggctatcatgnnnnnnnattctctt-aaaaaagcataatgaaatatacataatatattattattatcatt 257  Q
    |||||||||||||||||| |||||||||||||||||||||       |||||||| |||||| ||||||||||||||||||||||| | |||||| || |    
T  46294858 cttaaccccattagagatcaaaaggatggtggctatcatgtttttttattctcttaaaaaaaacataatgaaatatacataatataattttattaccact 46294957  T
Q  258 cttttgaatcctaacg 273  Q
    | |||||||| |||||    
T  46294958 cctttgaatcttaacg 46294973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 21246733 - 21246994
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||||||||||||| || ||| |||||||||||||  | ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |    
T  21246733 atacaaccatatattggcagtatggtagaacaaattgt-agtatttggtaaaccttacaataatgttcaaaactcaagaatatttacaaaacaaacat-a 21246830  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatg-nnnnnnn 205  Q
    ||||||||||||||||||||||||||||||             |||||||| ||| |||||||||||||| |||| ||||||||||||||||            
T  21246831 aagtatttctttgttccaacatcagatgtt---ttttctttttcaagttgttcttcaccccattagagatcaaaaagatggtggctatcatgtttttttt 21246927  T
Q  206 attctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    ||||||||||||||  | |||||||||||||||||||| |||||||| ||||  ||||||||||||||    
T  21246928 attctcttaaaaaa-aaaaatgaaatatacataatataatattattaccattgctttgaatcctaacg 21246994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 1799048 - 1799120
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaac 79  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1799048 atacaaccatatattgacagtattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaac 1799120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 151 - 273
Target Start/End: Original strand, 1799129 - 1799252
Alignment:
Q  151 aagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnn-attctcttaaaaaagcataatgaaatatacataatatattatta 249  Q
    |||||||||||||||||||||||||| | |||||||||||||| ||||        |||||||||||||| |||||| |||||||||||||||| |||||    
T  1799129 aagttgtccttaaccccattagagatcacaaggatggtggctaccatgttttttttattctcttaaaaaaacataataaaatatacataatataatatta 1799228  T
Q  250 ttatcattcttttgaatcctaacg 273  Q
    ||| | ||| ||||||||||||||    
T  1799229 ttacctttcctttgaatcctaacg 1799252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 23703305 - 23703367
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataa 69  Q
    |||||||||||||||| |||||| ||| || ||||||||| |||||  ||||| |||||||||    
T  23703305 atacaaccatatattggcaatatggtaaaataaattggcagtatttaataaactctacaataa 23703367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 3e-86; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 5574866 - 5574601
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5574866 atacaaccatatattgacagtattgtagaacaaattggca-tatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 5574768  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||| ||||||||             ||||||||||||| |||||||||||| |||||||||||||||||||||       |    
T  5574767 aagtatttctttgttccaacattagatgttgttttttcttttttaagttgtccttaatcccattagagatcaaaaggatggtggctatcatgttttttta 5574668  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  5574667 ttctcttaaaaaaacataatgaaatatacataatataatattcttaccattcttttgaatcctaacg 5574601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 17647569 - 17647835
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||| |||| |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  17647569 atacaaccatatattgacagtattgtagaagaaataggcagtatttggtaaaccctacaataatgttcaaaactcaaaaatatttataaaacaaacataa 17647668  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| ||||||||| |||||||||||       |    
T  17647669 aagtatttctttgttccaacatcagatgttgttttttccttttcaagttgtccttaaccccattagagatcaaaaggatgatggctatcatgttttttta 17647768  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||  ||||||||||||||    
T  17647769 ttctcttaaaaaaacataatgaaatatacataatataatattattaccatttctttgaatcctaacg 17647835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 7 - 263
Target Start/End: Original strand, 26359422 - 26359678
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  26359422 atacaaccatatattgacagtattgtagaacaaatttgcagtatttggtaaaccctacaataatattcaaaactcaagaatatttacaaaacaaacataa 26359521  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    ||||||||||||||| |||||||| ||||||            ||||||||||||||||||||||||||| |||||||||||||||||||||       |    
T  26359522 aagtatttctttgtttcaacatcaaatgttgttttttctttttcaagttgtccttaaccccattagagatcaaaaggatggtggctatcatgttttttta 26359621  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttg 263  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||    
T  26359622 ttctcttaaaaaaacataatgaaatatacataatataatattattaccattcctttg 26359678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 6914406 - 6914670
Alignment:
Q  8 tacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataaa 107  Q
    |||||| |||||||| || ||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||    
T  6914406 tacaactatatattggcagtatggtagaacaagttggcagtatttggtaaaccttacaataatgttcaaaactcacgaatatttacaaaacaaacataaa 6914505  T
Q  108 agtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnnat 207  Q
    || |||||||||||||||||||| ||||||            ||||||||| || |||||||||||||| |||| ||||||||||||||||       ||    
T  6914506 agcatttctttgttccaacatcatatgttgttttttctttttcaagttgtctttcaccccattagagatcaaaacgatggtggctatcatgtttttttat 6914605  T
Q  208 tctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  6914606 tctcttaaaaaa-aataatgaaatatacataatataatattattatcatttctttgaatcctaacg 6914670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 4e-82; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 26726 - 26457
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26726 atacaaccatatattgacagtattgtagaataaattgacaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 26627  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| |||||||||||||||||||||       |    
T  26626 aagtatttctttgttccaacatcagatgttgttttttctttttcaagttgtccttaaccccattagagatcaaaaggatggtggctatcatgttttttta 26527  T
Q  207 ttctctt---aaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    |||||||   |||||| ||||| ||||||||||||||||| |||||||||  ||| ||||||||||||||    
T  26526 ttctcttaaaaaaaaaacataacgaaatatacataatataatattattatttttcctttgaatcctaacg 26457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 20832613 - 20832337
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      
T  20832613 atacaaccatatattgacagcattgtagaacaaattggcagtatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacat-- 20832516  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||| ||||||||||||||||||||||||||            |||||||||||||| |||||||||||| |||||||||||||||||||||       |    
T  20832515 aagtgtttctttgttccaacatcagatgttgttttttctttttcaagttgtccttaatcccattagagatcaaaaggatggtggctatcatgttttttta 20832416  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||   ||||||||||    
T  20832415 ttctcttaaaaaaacataatgaaatatacataatataatattattaacattcctttgaatcctaacaggggaagaagac 20832337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 7 - 284
Target Start/End: Original strand, 15564804 - 15565083
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  15564804 atacaaccatatattgacagtattgtagaacaaattggcagtatttgataaacccaacaataatgttcaaaattcaagaatatttacaaaacaaacataa 15564903  T
Q  107 aagtatttctttgttccaacatcagatgttg--nnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnn 204  Q
    |||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||| ||||||||||||| |||||||          
T  15564904 aagtatttctttgttccaacatcagatgttgtttttttttctcttcaagttgtccttaaccccattagagatcaaaaggatggtggttatcatgtttttt 15565003  T
Q  205 nattctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaaga 284  Q
     |||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||| |||| |  |||||||||    
T  15565004 tattctcttaaaaaaacataatgaaatatacataatataatattattaccattcctttgaattctaatgggggaagaaga 15565083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 25631073 - 25630795
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    |||||| |||||||||||| ||| |||||| ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||| | ||||    
T  25631073 atacaagcatatattgacagtatggtagaataaattggcagtatttggtaaaccctacattaatgttaaaaactcaagaatatttacaaaacaaagataa 25630974  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    ||  |||||||||||||||||||||||||||            |||||| ||||| |||||||||||||| ||||||||| |||||||||||       |    
T  25630973 aaacatttctttgttccaacatcagatgttgttttttctttttcaagttctccttcaccccattagagatcaaaaggatgttggctatcatgttttttta 25630874  T
Q  207 ttctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||| ||||| ||||||||||||||||||||||| |||||||| ||||| || |||| |||| |  ||||||||||    
T  25630873 ttctcttgaaaaaacataatgaaatatacataatataatattattaccattccttggaattctaatgggggaagaagac 25630795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 7 - 270
Target Start/End: Complemental strand, 12502991 - 12502722
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||| |||||||| || ||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12502991 atacaacaatatattggcagtatggtaaaacaaattgacaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 12502892  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatg------nn 200  Q
    ||  |||||||||||||||||||||||||||            |||||||||||| |||||||||||||| |||||||||||||||||||||            
T  12502891 aaacatttctttgttccaacatcagatgttgttttttctttttcaagttgtccttcaccccattagagatcaaaaggatggtggctatcatgtttttttt 12502792  T
Q  201 nnnnnattctcttaaaaaagcataatgaaatatacataatatattattattatcattcttttgaatccta 270  Q
         |||||||||| ||| |||| |||||||||||||||||| |||||||| ||||  |||||||||||    
T  12502791 tttttattctcttaataaaacatagtgaaatatacataatataatattattaccatttctttgaatccta 12502722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 25094414 - 25094496
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatat 89  Q
    ||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  25094414 atacaactatatattgacaatattgtataacaaattcacaatatttggtaaaccctacaataatgttcaaaactcaagaatat 25094496  T

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Target: chr6 (Bit Score: 151; Significance: 1e-79; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 7 - 285
Target Start/End: Original strand, 11099214 - 11099493
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  11099214 atacaaccatatattgacggtattgttgaacaaattggcagtatttggtaaaccctacaataatgttcaaaactcaaaaatattttcaaaacaaacataa 11099313  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatgnnnnnnna 206  Q
    |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| |||| |||||||||||||||        |    
T  11099314 aagtatttctttgttccaacatcagatgttgttttttctttttcaagttgtccttaaccccattagagatcaaaatgatggtggctatcatattttttta 11099413  T
Q  207 ttctctt-aaaaaagcataatgaaatatacataatatattattattatcattcttttgaatcctaacgacggaagaagac 285  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||   ||||||||||    
T  11099414 ttctcttaaaaaaaacataatgaaatatacataatataatattattatcattcctttgaatcctaacaggggaagaagac 11099493  T

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Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 252
Target Start/End: Original strand, 28537808 - 28538052
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||||| |||||||||| ||||| ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  28537808 atacaaccatatattgacagtattgtagaataaattagcagtatttgataaatcctacaataatgttcaaaactcaagaatatttacaaaacaaacataa 28537907  T
Q  107 aagtatttctttgttccaacatcagatgttgnnnnnnnnnnnncaagttgtccttaaccccattagagattaaaaggatggtggctatcatg-nnnnnnn 205  Q
    || |||||||||||||||||||||||||||             |||||||||||||||||||| |||||| |||||||||||||||||||||            
T  28537908 aaatatttctttgttccaacatcagatgtt---ttttctttttcaagttgtccttaaccccatcagagatcaaaaggatggtggctatcatgtttttttt 28538004  T
Q  206 attctctt-aaaaaagcataatgaaatatacataatatattattatta 252  Q
    |||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  28538005 attctcttaaaaaaaacataatgaaatatacataatataatattatta 28538052  T

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Target: chr6; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 1563178 - 1563308
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaaccctacaataatgttcaaaactcaagaatatttacaaaacagacataa 106  Q
    ||||||||||||||||  | ||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  1563178 atacaaccatatattggaagtatggtagaacaaattgacagtattttgtaaaccctacaataatgttcaaaactcaagaatagttacaaaacaaacataa 1563277  T
Q  107 aagtatttctttgttccaacatcagatgttg 137  Q
    ||| |||||||||||||||||||||||||||    
T  1563278 aagcatttctttgttccaacatcagatgttg 1563308  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 1563380 - 1563450
Alignment:
Q  206 attctcttaaaaaag---cataatgaaatatacataatatattattattatcattcttttgaatcctaacg 273  Q
    ||||||||||||||    |||||||||||||| |||||||| |||||||| || || ||| ||||||||||    
T  1563380 attctcttaaaaaaaaaacataatgaaatataaataatataatattattaccactcctttcaatcctaacg 1563450  T

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Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 12758 - 12809
Alignment:
Q  7 atacaaccatatattgacaatattgtagaacaaattggcaatatttggtaaa 58  Q
    |||||||||||||||| || ||| |||||||||||||||| |||||||||||    
T  12758 atacaaccatatattggcagtatggtagaacaaattggcagtatttggtaaa 12809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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