View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4878-Insertion-4 (Length: 299)
Name: NF4878-Insertion-4
Description: NF4878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4878-Insertion-4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 8 - 299
Target Start/End: Original strand, 26937070 - 26937365
Alignment:
| Q |
8 |
ccattcaacctatgcagtagacacttccgattaaagatgtgttggtgactgtctgacacattccgcctccggtgtcgtagagtgacacatgtattgacac |
107 |
Q |
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| T |
26937070 |
ccattcaacctatgcagtagacacttccgattaaagatgtgttggtgactgtatgacacattccgcctccggtgtcgtacagtgacacatgtattgacac |
26937169 |
T |
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| Q |
108 |
attcaaactctttttcttcttcaaattatcactgatatctacatattagtatttgtgtcgta-------ttcatgtctatgacggtacttcatagacttc |
200 |
Q |
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| T |
26937170 |
attcaaactcttt---ttcttcaaattattactgatatttacatgttagtatttgtgtcgtatcagatgtccatgtctacgacggtacttcatagatttc |
26937266 |
T |
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| Q |
201 |
atgtagttaattatcttgtggtaactaatttcctttactaaagataatacaaatatgatagggtaggattcatagcttttgatgattacaacttagaag |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
26937267 |
atgtagttaattatcttgtggtaactaatttcctttactaaagataatacaaatatgatagggtaggattcatagcttttgacgattacaacttagaag |
26937365 |
T |
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