View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4878_high_9 (Length: 265)
Name: NF4878_high_9
Description: NF4878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4878_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 39864825 - 39864582
Alignment:
| Q |
1 |
atgacaaggatgaaaccaaggatgcactgataaaccctaaaaagattcaacatttcatttcaagtgccacccgcaaaaagcaattatcttgctgttttta |
100 |
Q |
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| T |
39864825 |
atgacaaggatgaaaccaaggatgcactgataaaccctaaaaagattcaacatttgatttcaagtgccacccgcaaaaagcaattatcttgctgtttttt |
39864726 |
T |
|
| Q |
101 |
cccttttctcagaagaaattcctttttctttttaattaataattagtttatagcttctttttgcaggtgtatcttaaatgtgtatgtagggtatctctct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39864725 |
cccttttctcagaagaaattcctttttctttttaattaataattagtttatagcttctttttgcaggtgtatcttaaatgtgtatgtagggtatctctct |
39864626 |
T |
|
| Q |
201 |
ccccatctaactctttctctttcttttgcctccatcattaccta |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39864625 |
ccccatctaactctttctctttcttttgcctccatcattaccta |
39864582 |
T |
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