View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4880_high_4 (Length: 305)
Name: NF4880_high_4
Description: NF4880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4880_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 16 - 288
Target Start/End: Complemental strand, 3088021 - 3087749
Alignment:
| Q |
16 |
agtggacttgtccatctatatttgtaccagtgcctaatttgatcaggccatacacataaggctgataagttaccattgacatggggaggtaacaaatgat |
115 |
Q |
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| T |
3088021 |
agtggacttgtccatctatatttgtaccagtgcctaatttgatcaggccatacacataaggctgataagttaccattgacatggggaggtaacaaatgat |
3087922 |
T |
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| Q |
116 |
gaactgcttctgatgcctcaggctttaaaagtgcctatcaatcatatagaaatcatcaattactttatcataattatgattccaataatacccttcaaga |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3087921 |
gaactgcttctgatgcctcaggctttaaaagtgcctatcaatcatatagaaatcatcaattactttatcataattatgattccaataatacccttcaaga |
3087822 |
T |
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| Q |
216 |
ataacagttatttgaattagcccttatacttattcataaccagcttgacaatcatttgatacattagctatgt |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
3087821 |
ataacagttatttgaattagcccttatacttattcataaccagcatgacaatcatttgatacattagctatgt |
3087749 |
T |
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