View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4882_high_5 (Length: 240)
Name: NF4882_high_5
Description: NF4882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4882_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 120 - 222
Target Start/End: Original strand, 15153631 - 15153731
Alignment:
| Q |
120 |
aacagccaccaaaccctaacgtgcacaccacaatatatctttcttcatatacaaattacaccctatataataacttccctcaacacctaacaaaccattc |
219 |
Q |
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| T |
15153631 |
aacagccaccaaaccctaacgtgcacaccacaatatatctttcttcata--caaattacaccctatataataacttccctcaacacctaacaaaccattc |
15153728 |
T |
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| Q |
220 |
ata |
222 |
Q |
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||| |
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| T |
15153729 |
ata |
15153731 |
T |
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