View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4884-Insertion-4 (Length: 496)

Name: NF4884-Insertion-4
Description: NF4884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4884-Insertion-4
NF4884-Insertion-4
[»] chr7 (1 HSPs)
chr7 (8-496)||(23130563-23131051)


Alignment Details
Target: chr7 (Bit Score: 481; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 8 - 496
Target Start/End: Original strand, 23130563 - 23131051
Alignment:
Q  8 gtctgtctatatgcaacggatccaatagctttgtccaattcagacattgacggaacaatggagaagtcgttgaaattgaaattcttaacatcaacatgat 107  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23130563 gtctgtctatatgcaacggatccaatcgctttgtccaattcagacattgacggaacaatggaaaagtcgttgaaattgaaattcttaacatcaacatgat 23130662  T
Q  108 tagtttcagtgcttccaaatagttgctcggtcataatactatcagagtaagaacttaatccattcgacgtgtctccaaactttccgtcattgtcgacaaa 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23130663 tagtttcagtgcttccaaatagttgctcggtcataatactatcagagtaagaacttaatccattcgacgtgtctccaaactttccgtcattgtcgacaaa 23130762  T
Q  208 gtgagaccatggccatatctcttctaccaagtgatttgattttgtctccacataaccaatatgttttgtctcaaatgatgaggaaaccatctcattttca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23130763 gtgagaccatggccatatctcttctaccaagtgatttgattttgtctccacataaccaatatgttttgtctcaaatgatgaggaaaccatctcattttca 23130862  T
Q  308 tttgctcttttgagggattttagctgaatttctctagacaatccatagtcattctgaggaaatcttgttgatgcatttatattgaaggaagtactagctg 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23130863 tttgctcttttgagggattttagctgaatttctctagacaatccatagtcattctgaggaaatcttgttgatgcatttatattgaaggaagtactagctg 23130962  T
Q  408 aagaagattcgtcgaagctatccatcaaataatgcgatagagttgagaatgaccaatcttgagaatcagttcccaagttcaatggtgta 496  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23130963 aagaagattcgtcgaagctatccatcaaataatgcgatagagttgagaatgaccaatcttgagaatcagttcccaagttcaatggtgta 23131051  T

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