View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4884_high_2 (Length: 381)

Name: NF4884_high_2
Description: NF4884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4884_high_2
NF4884_high_2
[»] chr4 (28 HSPs)
chr4 (15-381)||(48098363-48098714)
chr4 (20-381)||(16832698-16833072)
chr4 (82-381)||(25753202-25753502)
chr4 (13-381)||(38636905-38637283)
chr4 (13-375)||(22810844-22811205)
chr4 (13-381)||(41117639-41118018)
chr4 (84-381)||(49747557-49747854)
chr4 (92-340)||(49528143-49528390)
chr4 (129-320)||(19673191-19673378)
chr4 (232-381)||(53823322-53823472)
chr4 (14-123)||(42719455-42719565)
chr4 (87-320)||(19814976-19815210)
chr4 (232-381)||(39420915-39421064)
chr4 (13-85)||(28967213-28967285)
chr4 (14-164)||(52009084-52009234)
chr4 (269-381)||(2061677-2061789)
chr4 (102-200)||(39420809-39420908)
chr4 (202-319)||(35341209-35341325)
chr4 (82-164)||(19311118-19311202)
chr4 (35-73)||(16502053-16502091)
chr4 (29-83)||(25754215-25754269)
chr4 (13-82)||(46487621-46487690)
chr4 (16-59)||(9262807-9262850)
chr4 (29-79)||(35947994-35948044)
chr4 (111-195)||(20464804-20464886)
chr4 (178-319)||(31050511-31050648)
chr4 (35-79)||(35336914-35336958)
chr4 (35-83)||(43077307-43077355)
[»] chr6 (8 HSPs)
chr6 (13-381)||(20701468-20701854)
chr6 (13-353)||(3880283-3880621)
chr6 (13-346)||(15120273-15120613)
chr6 (86-381)||(32935099-32935390)
chr6 (20-85)||(6860369-6860436)
chr6 (13-81)||(17278133-17278201)
chr6 (35-75)||(26534424-26534464)
chr6 (271-381)||(13423496-13423606)
[»] chr7 (25 HSPs)
chr7 (13-381)||(8745183-8745539)
chr7 (77-381)||(24324544-24324849)
chr7 (13-381)||(42532930-42533303)
chr7 (112-381)||(6716522-6716787)
chr7 (102-343)||(1320863-1321103)
chr7 (43-381)||(3478382-3478729)
chr7 (16-81)||(16828774-16828839)
chr7 (85-320)||(23983298-23983530)
chr7 (13-219)||(33719157-33719375)
chr7 (13-78)||(28534175-28534240)
chr7 (178-381)||(34389992-34390193)
chr7 (13-69)||(6726090-6726146)
chr7 (232-343)||(44755657-44755769)
chr7 (13-69)||(47456744-47456800)
chr7 (13-69)||(48058343-48058399)
chr7 (13-84)||(36674809-36674880)
chr7 (34-123)||(44755866-44755956)
chr7 (16-82)||(16954830-16954895)
chr7 (31-68)||(22567781-22567818)
chr7 (22-87)||(39013578-39013643)
chr7 (106-198)||(3867327-3867417)
chr7 (30-85)||(6716424-6716479)
chr7 (82-132)||(28534281-28534332)
chr7 (85-143)||(6492886-6492946)
chr7 (95-198)||(31971904-31972004)
[»] chr3 (26 HSPs)
chr3 (15-381)||(37123412-37123778)
chr3 (138-381)||(14879465-14879708)
chr3 (13-381)||(25647714-25648093)
chr3 (114-342)||(28937498-28937726)
chr3 (142-381)||(39021091-39021327)
chr3 (20-381)||(33143630-33144000)
chr3 (13-85)||(4171082-4171154)
chr3 (13-251)||(50518760-50519008)
chr3 (232-381)||(14755166-14755316)
chr3 (13-85)||(14893268-14893340)
chr3 (128-319)||(23328150-23328337)
chr3 (137-296)||(37998971-37999125)
chr3 (13-130)||(14194210-14194340)
chr3 (85-164)||(25594304-25594384)
chr3 (23-125)||(14280230-14280344)
chr3 (22-69)||(14754963-14755010)
chr3 (33-83)||(46358073-46358123)
chr3 (30-78)||(16266099-16266147)
chr3 (178-319)||(45398890-45399027)
chr3 (82-164)||(48893105-48893189)
chr3 (271-381)||(1652827-1652937)
chr3 (85-253)||(4170902-4171070)
chr3 (30-83)||(32010127-32010180)
chr3 (85-199)||(823192-823306)
chr3 (286-381)||(5556600-5556696)
chr3 (53-85)||(41039495-41039527)
[»] chr2 (24 HSPs)
chr2 (32-375)||(34230237-34230592)
chr2 (13-381)||(7695993-7696371)
chr2 (13-239)||(12342992-12343215)
chr2 (89-381)||(16952143-16952434)
chr2 (89-381)||(17022808-17023099)
chr2 (89-381)||(17060114-17060405)
chr2 (33-381)||(10173270-10173629)
chr2 (13-343)||(37770324-37770654)
chr2 (13-345)||(41086475-41086812)
chr2 (102-381)||(1269513-1269786)
chr2 (13-85)||(13337588-13337660)
chr2 (13-163)||(4974990-4975155)
chr2 (13-163)||(4992898-4993063)
chr2 (178-319)||(14106372-14106509)
chr2 (258-381)||(13337304-13337427)
chr2 (13-79)||(33788296-33788362)
chr2 (13-81)||(29997287-29997355)
chr2 (14-85)||(41113412-41113483)
chr2 (30-80)||(22884802-22884852)
chr2 (30-83)||(25504576-25504629)
chr2 (21-83)||(24165855-24165917)
chr2 (30-83)||(4472283-4472336)
chr2 (95-198)||(387385-387488)
chr2 (13-65)||(33533415-33533467)
[»] chr5 (30 HSPs)
chr5 (13-381)||(26045634-26046015)
chr5 (13-381)||(8297498-8297880)
chr5 (82-381)||(14302196-14302481)
chr5 (114-381)||(33258665-33258933)
chr5 (16-297)||(26405222-26405512)
chr5 (212-381)||(7195122-7195290)
chr5 (13-164)||(10174925-10175089)
chr5 (22-381)||(13953928-13954285)
chr5 (13-381)||(25992037-25992411)
chr5 (82-247)||(21398072-21398236)
chr5 (89-164)||(33109957-33110034)
chr5 (271-375)||(21402778-21402882)
chr5 (10-83)||(5187282-5187355)
chr5 (16-156)||(7682806-7682960)
chr5 (95-198)||(7161783-7161886)
chr5 (31-85)||(30097671-30097725)
chr5 (13-83)||(33258560-33258630)
chr5 (77-214)||(7391745-7391881)
chr5 (210-342)||(7391916-7392048)
chr5 (35-83)||(31742504-31742552)
chr5 (88-141)||(7195059-7195114)
chr5 (30-83)||(8731278-8731331)
chr5 (95-190)||(18313413-18313505)
chr5 (33-81)||(24071952-24072000)
chr5 (15-75)||(27713421-27713481)
chr5 (7-77)||(23426646-23426716)
chr5 (89-130)||(30097612-30097654)
chr5 (116-200)||(14120779-14120864)
chr5 (106-198)||(18593454-18593544)
chr5 (328-381)||(22675322-22675375)
[»] chr1 (33 HSPs)
chr1 (29-374)||(34774907-34775266)
chr1 (16-381)||(27102221-27102589)
chr1 (82-342)||(31290773-31291031)
chr1 (232-381)||(6583118-6583267)
chr1 (77-381)||(10785208-10785510)
chr1 (130-332)||(9313108-9313309)
chr1 (91-320)||(16577352-16577579)
chr1 (14-221)||(4430881-4431084)
chr1 (233-321)||(16147648-16147736)
chr1 (33-321)||(32882463-32882757)
chr1 (20-228)||(11439698-11439919)
chr1 (21-250)||(46768343-46768579)
chr1 (13-85)||(9313011-9313083)
chr1 (206-277)||(52278438-52278509)
chr1 (13-85)||(376477-376549)
chr1 (86-191)||(41126247-41126353)
chr1 (234-317)||(41126379-41126462)
chr1 (21-83)||(32863225-32863287)
chr1 (44-195)||(52278502-52278661)
chr1 (86-162)||(32863303-32863381)
chr1 (34-83)||(50588964-50589014)
chr1 (95-195)||(24684261-24684358)
chr1 (106-198)||(46692599-46692689)
chr1 (102-197)||(16148987-16149082)
chr1 (32-83)||(19598990-19599042)
chr1 (34-81)||(42374526-42374573)
chr1 (13-83)||(31290692-31290762)
chr1 (281-375)||(32864512-32864606)
chr1 (33-79)||(46603705-46603751)
chr1 (44-85)||(16149114-16149155)
chr1 (33-78)||(17033939-17033984)
chr1 (202-319)||(27031710-27031827)
chr1 (271-381)||(38544678-38544789)
[»] scaffold0063 (2 HSPs)
scaffold0063 (105-381)||(58157-58433)
scaffold0063 (14-85)||(58466-58537)
[»] scaffold0050 (1 HSPs)
scaffold0050 (13-381)||(36737-37117)
[»] chr8 (14 HSPs)
chr8 (202-381)||(17656874-17657053)
chr8 (77-381)||(10248313-10248604)
chr8 (14-197)||(17656408-17656606)
chr8 (102-366)||(12197848-12198105)
chr8 (102-366)||(12442276-12442533)
chr8 (90-200)||(43312399-43312511)
chr8 (280-380)||(15906717-15906818)
chr8 (87-200)||(8862380-8862496)
chr8 (234-292)||(8862505-8862563)
chr8 (30-85)||(12197763-12197818)
chr8 (30-85)||(12442191-12442246)
chr8 (326-381)||(30236124-30236179)
chr8 (95-195)||(36631038-36631135)
chr8 (93-163)||(22325859-22325931)
[»] scaffold0200 (1 HSPs)
scaffold0200 (102-381)||(19413-19686)
[»] scaffold0119 (1 HSPs)
scaffold0119 (102-381)||(41916-42189)
[»] scaffold1384 (1 HSPs)
scaffold1384 (102-195)||(1429-1523)
[»] scaffold1613 (1 HSPs)
scaffold1613 (271-381)||(957-1068)


Alignment Details
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 15 - 381
Target Start/End: Complemental strand, 48098714 - 48098363
Alignment:
Q  15 gagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccctgaggacaacacccaccaaatacacgtcac 114  Q
    |||| |||||||| ||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||              ||||||||||||||||    
T  48098714 gagatcggtgaaactgaaaatacaaacaaaagacgcagtatataggcggaacacccgaaaataaacaccc--------------accaaatacacgtcac 48098629  T
Q  115 cacctaaaacaaactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaa 214  Q
    |||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  48098628 cacctaaaacactct-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcgtcactactcacccccaaagaaaatacacccctaaaaa 48098530  T
Q  215 ataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccg 314  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  48098529 ataaactcccagtcttaaacaccaaagttgagccacatccgaaaagctcctatctgaaagatcgttcatcttccaccacctctcgaccttcgatccatcg 48098430  T
Q  315 aaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48098429 aaagaaactataaaaagcccaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 48098363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 381
Target Start/End: Original strand, 16832698 - 16833072
Alignment:
Q  20 cggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct------------gaggacaacacccaccaaatac 107  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||||||  ||||||||||||||            |||||||||||||||||||||     
T  16832698 cggtgaaactgagaatacaaacaaaaggcgctgcatataggcggaacaccaaaaaataaacaccctaaaaactctcctgaggacaacacccaccaaataa 16832797  T
Q  108 acgtcaccacctaaaacaaact-cttcac-aaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacac 205  Q
    |||||||||||||||||| | | || ||| |||||||||| ||||||||| |||||||| ||| ||||||| |||||||||| |||||||||||| ||||    
T  16832798 acgtcaccacctaaaacatattcctgcacgaaaaacgaccgctgtaaaaaagatatccaacaccacccgtcgtcactactca-ccccaaagaaaaaacac 16832896  T
Q  206 ccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttc 305  Q
    ||||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||| |||| | ||||||||||| | |    
T  16832897 ccctcaaaattaaactcacagtcttgaacaccaaagttgagccacatccgaaaagctcatatcccaaagatcattcagcttcaatcacctcttgacttcc 16832996  T
Q  306 gatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    || |||| ||||||||| ||||||||| |||| |||||||| |||||||||| ||||| ||||||||||| |||||    
T  16832997 gaaccactgaaagaaaccataaaaagcccaaatccaaacttgatccaacaaaatgacttccgatctcgaatcaaaa 16833072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 82 - 381
Target Start/End: Complemental strand, 25753502 - 25753202
Alignment:
Q  82 ccctgaggacaacacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatc 179  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||||| ||||| |||| | ||||||||||| || |||||| ||  |  | || ||    
T  25753502 ccctgaggacaacacccaccaaaatacaagtcatcacctaaaacaaactccttcacgaaaagggccactgtaaaatcggtatccaacatcattcatcgtc 25753403  T
Q  180 actactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgt 279  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| ||||| | |||| ||||||||| |||||||| |||||||  | || |||||||| |    
T  25753402 actactcacccccaaagaaaa-acacccctcaaaattaaactttcagtcctgaacatcaaagttgaaccacatccaaaaagcttctctccgaaagatcat 25753304  T
Q  280 tcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaa 379  Q
    ||| |||||||  ||| | ||||| |||||||||||||||||| ||||||||| ||||| ||||||| | ||||  |||||||||||||||||||| |||    
T  25753303 tcagcttccactgcctatcgacctccgatccaccgaaagaaacaataaaaagcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatcaa 25753204  T
Q  380 aa 381  Q
    ||    
T  25753203 aa 25753202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 13 - 381
Target Start/End: Original strand, 38636905 - 38637283
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-------------gaggacaacaccca 99  Q
    ||||||||||||||| ||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||| |             ||||||||||||||    
T  38636905 cagagaccggtgaaaatgagactacaaacaagaggcgccgtat-taggcggaacacctgaaaataaacaccttaaataaaacccccgaggacaacaccca 38637003  T
Q  100 ccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaaga 197  Q
    | ||| |||| ||||||||||||||||||||| ||||| ||||| ||| ||||||||| ||||||||  || |||| || |||||||||||||||  |||    
T  38637004 cgaaaatacatgtcaccacctaaaacaaactccttcacgaaaacaaccgctgtaaaaatgatatcca--accacccatcgtcactactcacccccttaga 38637101  T
Q  198 aaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctct 297  Q
    ||| |||||||| | |   ||||| ||| |||| |||||||||||||| || | || | ||||||| ||||||||||||| |||| ||||||||||||||    
T  38637102 aaa-acaccccttatactaaaactcccaatcttgaacaccaaagttgaaccgcctcggcaaagctcttatctgaaagatcattcagcttccaccacctct 38637200  T
Q  298 tgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
     ||||| ||||||||| |||||||| ||||||||| |||||||  |||||| ||||  || ||||||||||||||||| |||||    
T  38637201 cgacctccgatccaccaaaagaaaccataaaaagcccaaaacc-tacttaagccaaagaattgactcccgatctcgaatcaaaa 38637283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 375
Target Start/End: Original strand, 22810844 - 22811205
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-gaggacaacacccacc-aaatacacg 110  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||| |||||| | | |||| |||||||||| ||||||  |||||||| |||||||||    
T  22810844 cagagactggtgaaattgagaatacaaac-aaaggcgccgtatataagcggaatatccgaaagtaaacaccctagaggacctcacccaccaaaatacacg 22810942  T
Q  111 tcaccacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccct 209  Q
    ||||| ||||||||| ||| |||||| ||| |||||||||||||||||||||||   || | || || ||||||||||||||||||||||  | ||| ||    
T  22810943 tcacctcctaaaacagactgcttcacgaaaccgaccactgtaaaaacgatatcc--taccatccatcgtcactactcacccccaaagaaa--aaacctct 22811038  T
Q  210 caaaaataaa--cttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcga 307  Q
     ||| |||||  | ||| ||| | |||||||||| ||||||||||||| ||| ||| || |   ||||   |||| ||||||||||||||  |||| | |    
T  22811039 aaaagataaaaccctcc-gtcctgaacaccaaagctgagccacatccgcaaaactcctaaccagaagacatttcaacttccaccacctctcaacctccaa 22811137  T
Q  308 tccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaa 375  Q
    |||| ||| |||||| |||||||||  |||||||||||| | ||||  ||||||||||||||||||||    
T  22811138 tccatcgagagaaaccataaaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaa 22811205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 381
Target Start/End: Original strand, 41117639 - 41118018
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct------------gaggacaacacccac 100  Q
    ||||||| ||||||||||||| ||||||||| ||||   |||||||||||||||||| |||||||||||||||            |||||||||||||||    
T  41117639 cagagacaggtgaaattgagactacaaacaagaggcatcgtatataggcggaacacccgaaaataaacaccctaaataacaccatgaggacaacacccac 41117738  T
Q  101 caaa-tacacgtcaccacctaaaacaaactctt-cacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaa 198  Q
    |||| ||||  |||||||||| |||| |||| | ||| ||||| |||  |||||||||||||||||  || |||| || ||| ||||||||||   ||||    
T  41117739 caaaatacatatcaccacctagaacagactcatgcacgaaaacaaccgttgtaaaaacgatatcca--accacccatcgtcattactcacccctttagaa 41117836  T
Q  199 aatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctctt 298  Q
    || |||||||||| ||  ||||| ||  || | |||||||||  |||||||| |||| ||||||| |||  |||||||| |||| ||||||||||||||     
T  41117837 aa-acacccctcagaataaaactcccgatcatgaacaccaaacctgagccacctccgcaaagctcctattcgaaagatcattcagcttccaccacctctc 41117935  T
Q  299 gaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||  |||||| |||||||||| ||||||||| ||||||| || || | ||||  |||| ||| ||||||||||| |||||    
T  41117936 gacctctgatccatcgaaagaaaccataaaaagcccaaaacctaatttgagccaaagaacttacttccgatctcgaatcaaaa 41118018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 84 - 381
Target Start/End: Complemental strand, 49747854 - 49747557
Alignment:
Q  84 ctgaggacaacacccaccaaa-tacacgtcaccacctaaaacaaactctt-cacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcac 181  Q
    ||||||||||||||||||||| | || |||||||||||||||| |||||| ||| |||||||||| ||||||||||| ||||| |||  ||| |  ||||    
T  49747854 ctgaggacaacacccaccaaaattcatgtcaccacctaaaacagactctttcacgaaaacgaccattgtaaaaacga-atccaacaccgcccattgtcac 49747756  T
Q  182 tactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttc 281  Q
    |||||||||| |||||||  ||  | ||| |||||||||||||| || |  ||||||||| | |||||  |||||||||||||||| ||||||||| |||    
T  49747755 tactcacccctaaagaaacaac--ctctctaaaataaacttccaatccttgacaccaaagctaagccatctccgaaaagctcatatatgaaagatcattc 49747658  T
Q  282 atcttccacca-cctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaa 380  Q
    | | | ||||| ||| |  ||||||||||||| ||||||| | ||||||||| ||||||||||||| ||| ||  ||||||||| ||||||| || ||||    
T  49747657 aacctacaccaacctatcaaccttcgatccacagaaagaacccataaaaagctcaaaaccaaacttgatcaaaagaactgactctcgatctcaaatcaaa 49747558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 340
Target Start/End: Complemental strand, 49528390 - 49528143
Alignment:
Q  92 aacacccaccaaata-cacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacc 189  Q
    ||||||||||||| | ||||||| ||||||||| | |||| ||||  | | |||||||| | |||||||||| ||  || | || || ||||||||||||    
T  49528390 aacacccaccaaaaaacacgtcatcacctaaaatagactccttcatgacaccgaccactattaaaacgatattca--accatccatcttcactactcacc 49528293  T
Q  190 cccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttcca 289  Q
    |||  |||||| |||||||||||||  |||||  ||||||| |||||||||| ||| ||||||||| ||||||  |||| |||||||| |||||||||||    
T  49528292 cccttagaaaa-acacccctcaaaataaaactctcagtcttgaacaccaaagctgaaccacatccgcaaagcttctatccgaaagatcattcatcttcca 49528194  T
Q  290 ccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaacc 340  Q
    |||||||  ||||| |||||||||||||||||| ||||||||| |||||||    
T  49528193 ccacctcccgacctccgatccaccgaaagaaaccataaaaagcccaaaacc 49528143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 320
Target Start/End: Complemental strand, 19673378 - 19673191
Alignment:
Q  129 tcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtc 228  Q
    ||||||| |||| ||||||||||||| | ||||||| ||| | ||||| |||||||||||||||||||||    ||| |||||||| ||||||  |||||    
T  19673378 tcttcacgaaaatgaccactgtaaaagcaatatccaacaccatccgtcgtcactactcacccccaaagaa----cactcctcaaaattaaactctcagtc 19673283  T
Q  229 ttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa 320  Q
     | |||||||||||| |||||||||||||||| |||||||  ||| ||| || | ||||||||| || | |||| |||||||||||||||||    
T  19673282 ctcaacaccaaagtttagccacatccgaaaagttcatatccaaaatatcatttagcttccaccatctatcgaccgtcgatccaccgaaagaa 19673191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 232 - 381
Target Start/End: Original strand, 53823322 - 53823472
Alignment:
Q  232 aacaccaaagttgagccacatccgaaaagctcatatctgaaa-gatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaa 330  Q
    |||||||||| |||||||||||| |||||||| ||||  ||| ||||  ||| |||||||||||||| ||||||||||| |||||||||||| |||||||    
T  53823322 aacaccaaagctgagccacatcctaaaagctcctatccaaaaagatcaatcaacttccaccacctctcgaccttcgatcaaccgaaagaaaccataaaaa 53823421  T
Q  331 gcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
     | ||||||||||||| | ||||  |||||||||||||||||||| |||||    
T  53823422 acccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 53823472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 42719565 - 42719455
Alignment:
Q  14 agagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccc-tgaggacaacacccaccaaatacacgtc 112  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||| |||||| |||||||||||||||||| |||| |||||| |||| ||| ||| |||    
T  42719565 agagaccggtgaaactgagaatacaaacaaaagacgccgtatataagcggaaaacctgaaaataaacacccttgagaacaacatccacaaaaaacatgtc 42719466  T
Q  113 accacctaaaa 123  Q
    |||||||||||    
T  42719465 accacctaaaa 42719455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 320
Target Start/End: Original strand, 19814976 - 19815210
Alignment:
Q  87 aggacaacacccaccaaata-cacgtcacca---cctaaaacaaac-tcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcac 181  Q
    |||||||||||||||||| | ||||||||||   ||| ||||| || ||||||| |||| |||||| ||||||| ||||||||  || | ||||  ||||    
T  19814976 aggacaacacccaccaaaaaacacgtcaccagtacctcaaacagacgtcttcacgaaaatgaccacggtaaaaatgatatccaataccatccgttgtcac 19815075  T
Q  182 tactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttc 281  Q
    |||||||||||||||||    |||  ||||| | ||||||  ||||| | |||||||||||| ||||||||| |||||| || |||| |||||||| ||     
T  19815076 tactcacccccaaagaa----cacttctcaagattaaactctcagtcctcaacaccaaagtttagccacatcggaaaagttcctatccgaaagatcattt 19815171  T
Q  282 atcttccaccacctcttgaccttcgatccaccgaaagaa 320  Q
    | ||||||||| |||| ||||| || |||||||||||||    
T  19815172 agcttccaccatctctcgacctccggtccaccgaaagaa 19815210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 381
Target Start/End: Original strand, 39420915 - 39421064
Alignment:
Q  232 aacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaag 331  Q
    |||||| ||| | ||||||||  ||||||||| ||||||||| |||  |||  ||||||||||||| || || ||||||||||||| |||| ||||||||    
T  39420915 aacaccgaagctaagccacatttgaaaagctcctatctgaaatatcaatcagtttccaccacctctcgatctccgatccaccgaaaaaaaccataaaaag 39421014  T
Q  332 cacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    | ||||||||||  | ||| ||  || ||||||||||||||||| |||||    
T  39421015 cccaaaaccaaaactgatctaaggaattgactcccgatctcgaatcaaaa 39421064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 28967285 - 28967213
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    |||||| ||||||||  || ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  28967285 cagagatcggtgaaacagataatacaaacgaaaggcgctgtatataggcggaacacctgaaaataaacaccct 28967213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 52009234 - 52009084
Alignment:
Q  14 agagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccctgaggacaacacccaccaaata-cacgtc 112  Q
    ||||| |||||||| |||| || |||||| ||||||| ||||||||||||||||||  |||| | || ||||||||||||| ||||||||| | |||| |    
T  52009234 agagatcggtgaaactgagcatgcaaacataaggcgccgtatataggcggaacaccctaaaaaacac-ccctgaggacaac-cccaccaaaaatcacgcc 52009137  T
Q  113 accacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatcca 164  Q
    ||||||||||||| ||| | |||   || ||||||||||||||||||||||||    
T  52009136 accacctaaaacagactccgtcatggaagcgaccactgtaaaaacgatatcca 52009084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 2061677 - 2061789
Alignment:
Q  269 tgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccga 368  Q
    ||||||||| |||| |||||||||||||| ||||| |||||||||||||||||  || |||||| ||||| ||||  | ||||||  ||||||||| | |    
T  2061677 tgaaagatcattcaacttccaccacctctcgacctccgatccaccgaaagaaatcatcaaaagcccaaaatcaaaactgatccaaagaactgactctcaa 2061776  T
Q  369 tctcgaaacaaaa 381  Q
    ||||||| |||||    
T  2061777 tctcgaatcaaaa 2061789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 39420809 - 39420908
Alignment:
Q  102 aaatacacgtcaccacctaaaacaaactctt-cacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaa 200  Q
    ||||||||||||||| |||||||  |||| | ||| | ||| ||||| ||| |||||||||||| ||| ||||||| ||||||||||| |||||||||||    
T  39420809 aaatacacgtcaccatctaaaactgactcctacacgagaacaaccaccgtataaacgatatccaacaccacccgtcgtcactactcacacccaaagaaaa 39420908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 35341209 - 35341325
Alignment:
Q  202 acacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgac 301  Q
    |||||||||||||  ||||| |||  ||| ||||||||| | ||||||||| ||||||||||||| ||||| || | | || ||||||| |||||| ||     
T  35341209 acacccctcaaaataaaactcccaaacttcaacaccaaact-gagccacattcgaaaagctcataactgaatgaacatgcagcttccacaacctctcgaa 35341307  T
Q  302 cttcgatccaccgaaaga 319  Q
    || |||||||||||||||    
T  35341308 ctccgatccaccgaaaga 35341325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 19311118 - 19311202
Alignment:
Q  82 ccctgaggacaacacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatcca 164  Q
    ||||| ||| ||||||||||||| ||||||||||||||  ||||| | || ||||| ||||||| ||||||||||||||||||||    
T  19311118 ccctggggataacacccaccaaaatacacgtcaccaccataaacagattccttcacgaaaacgagcactgtaaaaacgatatcca 19311202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 16502091 - 16502053
Alignment:
Q  35 tacaaacaaaaggcgcagtatataggcggaacacctgaa 73  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  16502091 tacaaacaaaaggcgctgtatataggcggaacacctgaa 16502053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 25754269 - 25754215
Alignment:
Q  29 tgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    |||||||||||| |||| |||| |||||||| ||||||| |||||||||||||||    
T  25754269 tgagaatacaaataaaaagcgccgtatatagacggaacatctgaaaataaacacc 25754215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 46487690 - 46487621
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacac 82  Q
    |||||||||||||  | |||||||||||| ||||||   |||||||||||||||| | ||||||||||||    
T  46487690 cagagaccggtgatttagagaatacaaactaaaggcatcgtatataggcggaacatccgaaaataaacac 46487621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 9262850 - 9262807
Alignment:
Q  16 agaccggtgaaattgagaatacaaacaaaaggcgcagtatatag 59  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||    
T  9262850 agaccgatgaaactgagaatacaaacaaaaggcgccgtatatag 9262807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 35947994 - 35948044
Alignment:
Q  29 tgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaa 79  Q
    |||||||||||||||||| |||  |||||| |||||||||| |||||||||    
T  35947994 tgagaatacaaacaaaagacgccatatataagcggaacacccgaaaataaa 35948044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 20464886 - 20464804
Alignment:
Q  111 tcaccacctaaaacaaactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaa 195  Q
    |||||||||||||||||||  ||| |||||| | | ||||||| ||| |||||| |||  ||| || ||||||||||||||||||    
T  20464886 tcaccacctaaaacaaact--tcaaaaaaacaaaccctgtaaacacggtatccaccaccgcccatcgtcactactcacccccaaa 20464804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 319
Target Start/End: Original strand, 31050511 - 31050648
Alignment:
Q  178 tcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatc 277  Q
    ||||||||||||||||| |||    ||||||||||||  ||||  |||| ||| |||||| ||| | |||||||  |||||||||| || | ||| || |    
T  31050511 tcactactcacccccaaggaa----cacccctcaaaataaaacagccagacttcaacacccaagcttagccacaatcgaaaagctcctaaccgaatgaac 31050606  T
Q  278 gttcatcttccaccacctcttgaccttcgatccaccgaaaga 319  Q
     | || ||||||| |||||| ||||| |||||||| ||||||    
T  31050607 atgcagcttccacaacctctcgacctccgatccactgaaaga 31050648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 35336958 - 35336914
Alignment:
Q  35 tacaaacaaaaggcgcagtatataggcggaacacctgaaaataaa 79  Q
    |||||||||||||||| |||||||| ||||||| | |||||||||    
T  35336958 tacaaacaaaaggcgccgtatatagacggaacatccgaaaataaa 35336914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 43077355 - 43077307
Alignment:
Q  35 tacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    |||||||||||  ||  |||||||||| |||||||||||||||||||||    
T  43077355 tacaaacaaaatacgtcgtatataggcagaacacctgaaaataaacacc 43077307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 8e-77; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 13 - 381
Target Start/End: Original strand, 20701468 - 20701854
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-----------gaggacaacacccacc 101  Q
    |||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||           |||||||||||||| |    
T  20701468 cagagatcggtgaaactgagaatacaaacaaaaggcgctgtatataggcggaacacctggaaataaacacactaaaacacccacgaggacaacacccatc 20701567  T
Q  102 aaat------acacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaa 194  Q
    |||       |||| |||||||||| |||| || | ||||| ||| | ||||||||||||||||||||||  || |||| || |||||||||||||||||    
T  20701568 aaaccctaaaacacttcaccacctataacagacccattcacgaaagcaaccactgtaaaaacgatatccaatactacccatcgtcactactcacccccaa 20701667  T
Q  195 agaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacc 294  Q
    | |||| |||||| | ||||| ||||| | |||||| |||| |||||||||||||||| |||||||||| |||| |||||||| |||| ||||||| |||    
T  20701668 aaaaaaaacaccctttaaaaacaaactcctagtcttgaacaacaaagttgagccacattcgaaaagctcctatccgaaagatcattcagcttccactacc 20701767  T
Q  295 tcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||| ||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||  |||| ||||||||||||||| |||||    
T  20701768 tctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttaagccaaagaactaactcccgatctcgaatcaaaa 20701854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 3880283 - 3880621
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccctgaggacaacacccaccaaatacacgtc 112  Q
    ||||||||||||||| ||| |||||||||||||||  | ||||||| ||||||||||  |||||||||||||| |    ||||| | |  |  |||||||    
T  3880283 cagagaccggtgaaactgaaaatacaaacaaaaggttccgtatataagcggaacaccaaaaaataaacaccctaaa---aacactc-cttaggacacgtc 3880378  T
Q  113 accacctaaaacaaactcttcac--aaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctc 210  Q
    ||||||||||||||||| ||  |  ||||||||||||| ||||||||||||||| ||| | | ||| ||||||||||||||| ||||||| |||||||||    
T  3880379 accacctaaaacaaacttttttccgaaaaacgaccactataaaaacgatatccaacaccatctgtcgtcactactcaccccctaagaaaaaacacccctc 3880478  T
Q  211 aaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatcc 310  Q
    |||| |||||| | |||||| |||||||||| |||||||||||| ||||||||||||| |||||||  |||| ||||||||||| || ||||| ||||||    
T  3880479 aaaattaaactccaagtcttgaacaccaaagctgagccacatccaaaaagctcatatccgaaagattattcaacttccaccaccactcgacctccgatcc 3880578  T
Q  311 accgaaagaaactataaaaagcacaaaaccaaacttaatccaa 353  Q
    || ||||||||| ||||||| | ||||||||||||| ||||||    
T  3880579 acggaaagaaaccataaaaatctcaaaaccaaacttgatccaa 3880621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 346
Target Start/End: Original strand, 15120273 - 15120613
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-------------gaggacaacaccca 99  Q
    ||||||||||| ||| ||||||||||||| |||| ||  |||| ||||| ||||| |||| ||||||||||||             |||||||||| |||    
T  15120273 cagagaccggtaaaactgagaatacaaactaaagacgacgtatgtaggcagaacatctgacaataaacaccctaaaaaacatccatgaggacaacatcca 15120372  T
Q  100 ccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaaga 197  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||  || ||| || ||    |||||| ||| | || || ||||||||||||| ||| ||    
T  15120373 ccaaaatacacatcaccacctaaaacagactcattcacaaaaaa-acgactttacaa----tatccaacaccatccatcgtcactactcaccctcaa-ga 15120466  T
Q  198 aaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaa-gatcgttcatcttccaccacctc 296  Q
    ||   || |||| |||| |||||   ||||| | |||||||||||  |||||| |||||||| || |||||| ||| ||||   || |||||||||||||    
T  15120467 aa---catccctaaaaattaaacccgcagtcctcaacaccaaagtaaagccacgtccgaaaatctaatatctaaaaagatcaaccagcttccaccacctc 15120563  T
Q  297 ttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaactt 346  Q
    | ||||| ||||||||| |||||||| ||||||||| |||||| ||||||    
T  15120564 tcgacctccgatccaccaaaagaaaccataaaaagcccaaaactaaactt 15120613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 381
Target Start/End: Original strand, 32935099 - 32935390
Alignment:
Q  86 gaggacaacacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcacta 183  Q
    ||||||||||||||||||| || ||  |||||||||||| | |||| || || |||||| || ||  ||||||||||| ||| || |||| |||||||||    
T  32935099 gaggacaacacccaccaaaataaacaccaccacctaaaatagactccttaacgaaaacgccccctc-aaaaacgatatacataaccacccatcatcacta 32935197  T
Q  184 ctcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcat 283  Q
    || |||||     |||| ||| ||||| |||  |||||  ||||  | | |||||||| ||||  ||||||||||| ||||| |  |||||||| | ||     
T  32935198 ctgacccc-----aaaaaacatccctctaaatgaaactcacagtgctcatcaccaaagctgagttacatccgaaaaactcatgttcgaaagatcatgcag 32935292  T
Q  284 cttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaactt-aatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||||||||||   ||||| || |||||||||||| |||| ||||||  ||||| ||||||| | |||||  |||||||||||||||||||| |||||    
T  32935293 cttccaccacctcccaacctttgaaccaccgaaagaacacta-aaaaagtccaaaatcaaacttgagtccaa-gaactgactcccgatctcgaatcaaaa 32935390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 6860436 - 6860369
Alignment:
Q  20 cggtgaaattgagaatacaaacaaaaggcgcagtatata--ggcggaacacctgaaaataaacaccct 85  Q
    |||||||| | |||||||||||||||| ||| |||||||  |||||||||||  ||||||||||||||    
T  6860436 cggtgaaactaagaatacaaacaaaagacgccgtatataggggcggaacacccaaaaataaacaccct 6860369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 17278133 - 17278201
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaaca 81  Q
    |||||||||||||    |||||||||| | |||||||  |||||||||||||||||| |||||||||||    
T  17278133 cagagaccggtgattcagagaatacaatctaaaggcgtcgtatataggcggaacacccgaaaataaaca 17278201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 26534424 - 26534464
Alignment:
Q  35 tacaaacaaaaggcgcagtatataggcggaacacctgaaaa 75  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  26534424 tacaaacaaaaggcgtcgtatataggcggaacacctgaaaa 26534464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 381
Target Start/End: Complemental strand, 13423606 - 13423496
Alignment:
Q  271 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatc 370  Q
    |||||||  ||| |||||||||||||  | ||| || |||| |||||||||| ||| ||||| || |||||||||| | ||||  ||| ||||| |||||    
T  13423606 aaagatcaatcagcttccaccacctcgcggcctccggtccatcgaaagaaaccatataaagcccataaccaaacttgagccaaagaaccgactctcgatc 13423507  T
Q  371 tcgaaacaaaa 381  Q
    ||||| |||||    
T  13423506 tcgaatcaaaa 13423496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 8e-74; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 13 - 381
Target Start/End: Complemental strand, 8745539 - 8745183
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccc-tgaggacaacacccaccaaatacacgt 111  Q
    ||||||| ||||||| ||| |||| |||||| || ||| |||||||||||||||||| ||||| |||||||| | | ||||||||||||||             
T  8745539 cagagactggtgaaactgaaaatagaaacaagagacgccgtatataggcggaacacccgaaaa-aaacaccccttaagacaacacccacca--------- 8745450  T
Q  112 caccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctc 210  Q
      ||| |||| |||||||| ||||| ||| |||||| || |||||| ||||||| ||| | || || ||||||||||||||||||||||| |||||||||    
T  8745449 --ccaactaacacaaactccttcacgaaa-cgaccaatgaaaaaacaatatccaacaccatccttcgtcactactcacccccaaagaaaa-acacccctc 8745354  T
Q  211 aaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatcc 310  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| | || ||||||| |||||| ||||| ||||||    
T  8745353 aaaattaaactcccagtcttgaacaccaaagctgagccacatccgaaaagctcctatctgaaagatcatgcagcttccacaacctctcgacctccgatcc 8745254  T
Q  311 accgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||| |||||| ||||||||||||| |||||    
T  8745253 accgaaagaaaccataaaaagcccaaaaccaaacttgatccaacgaactgaatcccgatctcgaatcaaaa 8745183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 77 - 381
Target Start/End: Original strand, 24324544 - 24324849
Alignment:
Q  77 aaacaccct-gaggacaacacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcac-aaaaacgaccactgtaaaaacgatatccatcacaacc 172  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||| ||||||| |||| ||||| ||||||||||| ||||| ||||||||||| | ||  |    
T  24324544 aaacacccttgaggacaacactcaccaaaatacacgtcaccacttaaaacagactccttcacgaaaaacgaccattgtaagaacgatatccaac-ca--c 24324640  T
Q  173 cgtcatcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaa 272  Q
    | || |||||||||||||| |||||||| |||||||||||||  |||||  | ||| | |||||||||| ||||||||| ||||||||||| || | |||    
T  24324641 catcgtcactactcacccctaaagaaaa-acacccctcaaaataaaactctccgtcctgaacaccaaagctgagccacagccgaaaagctcctaaccgaa 24324739  T
Q  273 agatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaacc-aaacttaatccaacaaactgactcccgatct 371  Q
    ||||| |||| ||||||||||| || ||||| ||||||||| |||||||| ||||||||| ||||||| |||||| | ||||  || |||||||||||||    
T  24324740 agatcattcagcttccaccacccctcgacctccgatccacctaaagaaaccataaaaagcccaaaaccaaaacttgagccaaagaattgactcccgatct 24324839  T
Q  372 cgaaacaaaa 381  Q
    |||| |||||    
T  24324840 cgaatcaaaa 24324849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 13 - 381
Target Start/End: Original strand, 42532930 - 42533303
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct------------gaggacaacacccac 100  Q
    |||||||||||| || ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||            || ||||||||||||    
T  42532930 cagagaccggtggaactgagaatacaaccaaaaggcgccgtatataggcggaacacctggaaataaacaccctaaaaactcccttgatgacaacacccac 42533029  T
Q  101 caaatac-acgtcaccacctaaaacaaac-tcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaa 198  Q
     ||| |  |||||| ||||||||||| || | ||||| ||| | |||| |||||||| || |||||  || |||| || ||||||||| |||||||||||    
T  42533030 aaaaaaatacgtcatcacctaaaacatacctattcacgaaagcaaccattgtaaaaatgaaatccaataccacccatcgtcactactcgcccccaaagaa 42533129  T
Q  199 aatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctctt 298  Q
    || ||||| || ||||||||||| |      | || ||||||| ||| ||| ||||||||||||| ||||||||||||||||||  | ||||||||||      
T  42533130 aa-acacctctaaaaaataaactcc------tgaa-accaaagctgatccatatccgaaaagctcttatctgaaagatcgttcagttgccaccacctcac 42533221  T
Q  299 gaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||  ||||||||||||||||| ||||||||| | ||||||||||||| ||||   | ||||||||||||||||| |||||    
T  42533222 gacctctgatccaccgaaagaaaccataaaaagc-ccaaaccaaacttaagccaaaggattgactcccgatctcgaatcaaaa 42533303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 112 - 381
Target Start/End: Original strand, 6716522 - 6716787
Alignment:
Q  112 caccacctaaaacaaactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctca 211  Q
    ||||||||||||||  | |||||| ||||||||||||||||||||| ||||   ||| |||| |  ||||||||||||||||| ||||   |||||| ||    
T  6716522 caccacctaaaacactc-cttcacgaaaacgaccactgtaaaaacggtatctcacaccacccattgtcactactcacccccaacgaaa---caccccaca 6716617  T
Q  212 aaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaa-gatcgttcatcttccaccacctcttgaccttcgatcc 310  Q
    ||| |||||| ||| || | |||||||||| ||||||||||||| |||  || |||| |||| ||||  ||| |||||||||||||| ||| ||||||||    
T  6716618 aaattaaactcccattcctcaacaccaaagctgagccacatccggaaaaatcttatccgaaaagatcaatcagcttccaccacctctcgac-ttcgatcc 6716716  T
Q  311 accgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||||||||| ||||||| | ||| ||||||||| | ||||  |||||||||||||||||||| |||||    
T  6716717 accgaaagaaaccataaaaaacccaagaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 6716787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 343
Target Start/End: Complemental strand, 1321103 - 1320863
Alignment:
Q  102 aaatacacgtcaccacctaaaacaaactc--ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcaccccc-aaagaa 198  Q
    |||||||| ||||||||||||||| || |  ||||| ||| | |||||||||||||||||||| |  || || | || ||||||||||||||| ||||||    
T  1321103 aaatacacatcaccacctaaaacagacccctttcacgaaagcaaccactgtaaaaacgatatctaataccactcatcgtcactactcaccccccaaagaa 1321004  T
Q  199 aatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctctt 298  Q
    ||   ||||||||||| |||||| || ||| | || ||||||||||||||||||| |||||| || |||| ||  |||| | ||  | ||||| |||||     
T  1321003 aa---acccctcaaaactaaactccctgtcatgaa-accaaagttgagccacatctgaaaagatcttatccgagggatcatacagttgccaccccctctc 1320908  T
Q  299 gaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaa 343  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||    
T  1320907 gacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaa 1320863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 43 - 381
Target Start/End: Complemental strand, 3478729 - 3478382
Alignment:
Q  43 aaaggcgcagtatataggcggaacacctgaaaataaacaccct-------------gaggacaacacccaccaaata-cacgtcaccacctaaaacaaac 128  Q
    |||||||| |||||||||||||||||| |||||||||||||||             ||| |||||| |||||||| | || ||||||| || ||||| ||    
T  3478729 aaaggcgccgtatataggcggaacacccgaaaataaacaccctaaaagacaatccagagcacaacatccaccaaaaaacaagtcaccaactcaaacagac 3478630  T
Q  129 -tcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaaataaacttccagt 227  Q
     ||||||| || ||||| ||||||||| ||||||||||||| | ||||| |||||||||||||| ||||||    ||| |||||||| |||||| |||||    
T  3478629 gtcttcacgaatacgac-actgtaaaagcgatatccatcaccaaccgtcgtcactactcacccc-aaagaa----cactcctcaaaattaaactcccagt 3478536  T
Q  228 cttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actata 326  Q
    | | |||||||||| | |||||  || |||||| ||| ||| |||||||| |||| ||||| |||||||| || || |||||||||||||||| || | |    
T  3478535 cctcaacaccaaagcttagccaactcagaaaagttcacatccgaaagatcattcagcttccgccacctctcgatctccgatccaccgaaagaacacca-a 3478437  T
Q  327 aaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
     ||||| |||||| || ||| | ||||  |||| ||||||||||||||| |||||    
T  3478436 caaagcccaaaactaatcttgagccaaagaactaactcccgatctcgaatcaaaa 3478382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 16828774 - 16828839
Alignment:
Q  16 agaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaaca 81  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  16828774 agaccggtgaaactgagaatacaaacaaaatgcgccgtatataggcggaacacccgaaaataaaca 16828839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 85 - 320
Target Start/End: Complemental strand, 23983530 - 23983298
Alignment:
Q  85 tgaggacaacacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcact 182  Q
    |||||||||||||||||||| || ||  |||||||||||||| |||| ||||| ||||| ||||||| ||||||||||| ||| || |||| ||||||||    
T  23983530 tgaggacaacacccaccaaaataaacaccaccacctaaaacagactcattcacgaaaacaaccactg-aaaaacgatatacataactacccatcatcact 23983432  T
Q  183 actcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttca 282  Q
    ||||||||| |||||    | ||| ||| |||  ||| |  | ||| | | || ||||| ||| ||| |||||||||||||||||  |||||||| ||||    
T  23983431 actcaccccaaaaga----agaccgctctaaatgaaattctcggtcctcatcatcaaagctgaaccagatccgaaaagctcatattcgaaagatcattca 23983336  T
Q  283 tcttccaccacctcttgaccttcgatccaccgaaagaa 320  Q
     ||  ||||||||||  |||| |||| |||||||||||    
T  23983335 actgtcaccacctctcaacctccgatacaccgaaagaa 23983298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 33719375 - 33719157
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct------------gaggacaacacccac 100  Q
    |||||| |||||||| |||||||||||||||| ||||| | |||||||||||||| | |||| ||||||||||            |||||||||||||||    
T  33719375 cagagatcggtgaaactgagaatacaaacaaacggcgctgaatataggcggaacatc-gaaagtaaacaccctaaaaacactcatgaggacaacacccac 33719277  T
Q  101 caaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaa-cgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaaga 197  Q
    |||| |||   ||||| ||||||||  |||| |||||||||| ||||| ||||||||| |||||||| ||| || | || |||||||||| |||||||||    
T  33719276 caaaatacctatcaccgcctaaaaccgactccttcacaaaaaacgacctctgtaaaaatgatatccaacactactcatcgtcactactca-ccccaaaga 33719178  T
Q  198 aaatacacccctcaaaaataaa 219  Q
    ||| |||||||| |||||||||    
T  33719177 aaaaacacccct-aaaaataaa 33719157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 28534175 - 28534240
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataa 78  Q
    |||||||||||||  | ||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  28534175 cagagaccggtgatttagagaatacaaataaaaggcgccgtatataggcggaacacccgaaaataa 28534240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 381
Target Start/End: Complemental strand, 34390193 - 34389992
Alignment:
Q  178 tcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatc 277  Q
    |||||||||| ||||||||||    ||||||||||||  ||||| |||| ||  |||||| ||||||||||||||  ||||||||| ||   ||| || |    
T  34390193 tcactactcatccccaaagaa----cacccctcaaaataaaactcccagactacaacacccaagttgagccacatttgaaaagctcctaatcgaatgaac 34390098  T
Q  278 gttcatcttccaccacctcttgaccttcgatccaccgaaaga-aactata-aaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaa 375  Q
     | || ||||||| |||||| ||||| |||||||||||||||  || | | |||||| ||||| | ||||||| ||||  | ||||||||||||||||||    
T  34390097 atgcagcttccacaacctctcgacctccgatccaccgaaagagcacaaaataaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaa 34389998  T
Q  376 acaaaa 381  Q
     |||||    
T  34389997 tcaaaa 34389992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 6726090 - 6726146
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacc 69  Q
    |||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||||    
T  6726090 cagagatcggtgaaactgagaatacaaacaaaaaacgccgtatataggcggaacacc 6726146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 343
Target Start/End: Complemental strand, 44755769 - 44755657
Alignment:
Q  232 aacaccaaagttgagccacatccgaaaag-ctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaa 330  Q
    |||||||||||||||| || ||||||||  ||| ||||  ||||||| |||| |||||||||||| | |||||  |||  |||||||||||| |||||||    
T  44755769 aacaccaaagttgagctacctccgaaaaaactcttatccaaaagatcattcagcttccaccacctatcgacctctgatataccgaaagaaaccataaaaa 44755670  T
Q  331 gcacaaaaccaaa 343  Q
    || ||||| ||||    
T  44755669 gcccaaaatcaaa 44755657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 47456744 - 47456800
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacc 69  Q
    |||||||||||||||  || ||||||||  |||||||||||||||||||||||||||    
T  47456744 cagagaccggtgaaacagaaaatacaaatgaaaggcgcagtatataggcggaacacc 47456800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 48058343 - 48058399
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacc 69  Q
    |||||||||||||||| |||||||||||| |||||||   |||||||||||||||||    
T  48058343 cagagaccggtgaaatagagaatacaaacgaaaggcgtcatatataggcggaacacc 48058399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 36674880 - 36674809
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccc 84  Q
    |||||| |||||||||||   ||||||||||||||||  |||||||||||||| | | ||||||||||||||    
T  36674880 cagagatcggtgaaattggagatacaaacaaaaggcgtcgtatataggcggaatatccgaaaataaacaccc 36674809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 44755956 - 44755866
Alignment:
Q  34 atacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccc-tgaggacaacacccacc-aaatacacgtcaccacctaaaa 123  Q
    ||||||||||||||||  ||||||||||| ||||||| ||||||||||||| ||||||| |||||| || |||| |||| | ||||||||||    
T  44755956 atacaaacaaaaggcgttgtatataggcgaaacacct-aaaataaacacccttgaggaccacacccgcctaaattcacgcctccacctaaaa 44755866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 16954895 - 16954830
Alignment:
Q  16 agaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacac 82  Q
    |||||||||||| ||||| |||||| ||||||| | |||||||||||||||| | ||||||||||||    
T  16954895 agaccggtgaaactgaga-tacaaataaaaggcaccgtatataggcggaacatccgaaaataaacac 16954830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 22567781 - 22567818
Alignment:
Q  31 agaatacaaacaaaaggcgcagtatataggcggaacac 68  Q
    |||||||||||||||||||| |||||||||||||||||    
T  22567781 agaatacaaacaaaaggcgccgtatataggcggaacac 22567818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 39013643 - 39013578
Alignment:
Q  22 gtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccctga 87  Q
    |||||| ||||||||||||||| || ||  |||||||| ||||| |||| ||||||||||||||||    
T  39013643 gtgaaactgagaatacaaacaagagacgttgtatatagacggaatacctaaaaataaacaccctga 39013578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 3867417 - 3867327
Alignment:
Q  106 acacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaa 198  Q
    |||| |||||||| ||||||||||| ||||||||||| ||   |||||| |||||||||| |||   || || |||||||||||||||||||||    
T  3867417 acacatcaccacccaaaacaaactccttcacaaaaacaac---tgtaaacacgatatccaccaccgtccatcgtcactactcacccccaaagaa 3867327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 6716424 - 6716479
Alignment:
Q  30 gagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    |||||||||||  ||||| || |||||||  |||||||||||||||||||||||||    
T  6716424 gagaatacaaattaaaggggccgtatataaccggaacacctgaaaataaacaccct 6716479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 28534281 - 28534332
Alignment:
Q  82 ccctgaggacaacacccacc-aaatacacgtcaccacctaaaacaaactctt 132  Q
    |||||||||||||||||||| ||||| || ||||||||||||||| ||||||    
T  28534281 ccctgaggacaacacccaccaaaataaacatcaccacctaaaacagactctt 28534332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 6492886 - 6492946
Alignment:
Q  85 tgaggacaacacccaccaaa-tacacgtcaccacctaaaacaaact-cttcacaaaaacga 143  Q
    ||||||||||| |||||||| | ||||||||||||||||||| ||| ||||| ||||||||    
T  6492886 tgaggacaacatccaccaaaattcacgtcaccacctaaaacagactccttcataaaaacga 6492946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 31971904 - 31972004
Alignment:
Q  95 acccaccaaatacacgtcaccacctaaaacaaactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaa 194  Q
    |||||||||| |||| | ||||||||||||||||||  || |||||| | ||||||||| ||| |||| | |||  ||| || ||||||||||||| |||    
T  31971904 acccaccaaa-acacataaccacctaaaacaaactc--caaaaaaacaagcactgtaaacacggtatcaaccaccgcccatcgtcactactcacccacaa 31972000  T
Q  195 agaa 198  Q
    ||||    
T  31972001 agaa 31972004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 7e-65; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 15 - 381
Target Start/End: Complemental strand, 37123778 - 37123412
Alignment:
Q  15 gagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-gaggacaacacccaccaaa-tacacgtc 112  Q
    ||||||| ||||| |||||||||||||||||||||   || |||| ||||||||| ||||||||||||||| || |||||||||||||||| ||||| ||    
T  37123778 gagaccgatgaaactgagaatacaaacaaaaggcgtcctacatagtcggaacacccgaaaataaacacccttgaagacaacacccaccaaaatacacatc 37123679  T
Q  113 accacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctca 211  Q
    ||||  ||||| | ||| |||||| |||||||||||||||||||||||||||| ||| ||| ||  |||||||||||| |||||||  | |||||||||     
T  37123678 accatataaaatagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccacctgttgtcactactcaccgccaaagatga-acacccctcc 37123580  T
Q  212 aaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatcca 311  Q
    ||| ||||||  |||||   |||| ||||| |||||||||| |||||||||||| ||||||||||| | || |||||||||||| | || || ||||||     
T  37123579 aaattaaactctcagtccagaacatcaaagctgagccacat-cgaaaagctcatgtctgaaagatcatacagcttccaccacctatcgaactccgatcc- 37123482  T
Q  312 ccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
     |||||||||| ||||||||| |||||||||| || ||||||  ||||||||||| |||||||| |||||    
T  37123481 tcgaaagaaaccataaaaagcccaaaaccaaatttgatccaaagaactgactcccaatctcgaatcaaaa 37123412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 138 - 381
Target Start/End: Complemental strand, 14879708 - 14879465
Alignment:
Q  138 aaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacacc 237  Q
    |||||||||||| |||||||||||||| ||| || | || |||||| ||||||| |||||||| ||||||||||||| |||||| |||| ||| ||||||    
T  14879708 aaacgaccactgaaaaaacgatatccaacaccacacatcgtcactattcaccccgaaagaaaa-acacccctcaaaattaaactcccagacttgaacacc 14879610  T
Q  238 aaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaa 337  Q
    |||   |||||||||||||||||||| ||||||||||||| || | |||||||||||||| ||||| | |||||||||||||||| ||||||||  ||||    
T  14879609 aaacccgagccacatccgaaaagctcctatctgaaagatcattaagcttccaccacctctcgacctcctatccaccgaaagaaaccataaaaagtccaaa 14879510  T
Q  338 acc-aaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||| |||||| ||||||| ||| |||||||||||||||| |||||    
T  14879509 accaaaacttgatccaacgaacagactcccgatctcgaatcaaaa 14879465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 381
Target Start/End: Complemental strand, 25648093 - 25647714
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct------------gaggacaacacccac 100  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||            |||||| ||||||||    
T  25648093 cagagatcggtgaaactaagaatacaaacaaaaggcgcagtatatagacggaacacccgaaaataaacaccctaaaaacacacatgaggaccacacccac 25647994  T
Q  101 caaata-cacgtcaccacctaaaacaaactct-tcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaa 198  Q
    |||||| || |||||||| ||||||| ||||  |||| ||| | ||||||| ||||||||||||||  || | || ||||||||||||||||||||| ||    
T  25647993 caaataacatgtcaccacataaaacatactccatcacgaaacc-accactg-aaaaacgatatcca--accatccatcatcactactcacccccaaataa 25647898  T
Q  199 aatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctctt 298  Q
    || |||||||| |||||||| |  |   || | | |||||||  |||||||| ||||||||||||||| | |||||||| |||| ||| ||||||||||     
T  25647897 aa-acacccctaaaaaataacccccacttcctgagcaccaaaactgagccacgtccgaaaagctcataaccgaaagatcattcaactttcaccacctctc 25647799  T
Q  299 gaccttcgatccaccgaaagaaactataaaaagcacaaaacc--aaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||||| ||||||||| |||||||| |||||||||  ||||||  |||||||| ||||  |||  ||||||||||||||| |||||    
T  25647798 gacctccgatccaccaaaagaaaccataaaaagcctaaaaccaaaaacttaagccaaagaaccaactcccgatctcgaatcaaaa 25647714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 114 - 342
Target Start/End: Original strand, 28937498 - 28937726
Alignment:
Q  114 ccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaa 212  Q
    |||||||||||| || | ||||| |||  |||||||||||||||||||||||  || |||| ||  ||||||||||| ||||  |||| |||||||| ||    
T  28937498 ccacctaaaacagaccccttcacgaaagtgaccactgtaaaaacgatatccaataccacccatcgccactactcacctccaagtaaaaaacacccctaaa 28937597  T
Q  213 aaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccac 312  Q
    ||| ||||| | || | | |||| |||||| ||||||||||| |||||||| |  |||||| ||| |||| ||||||||| |||||||||| ||||||||    
T  28937598 aaacaaactcctagacctgaacatcaaagt-gagccacatccaaaaagctcctccctgaaacatcattcagcttccaccatctcttgacctccgatccac 28937696  T
Q  313 cgaaagaaactataaaaagcacaaaaccaa 342  Q
    |||||||||| ||||||||| |||| ||||    
T  28937697 cgaaagaaaccataaaaagcccaaatccaa 28937726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 142 - 381
Target Start/End: Original strand, 39021091 - 39021327
Alignment:
Q  142 gaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaag 241  Q
    ||||||||||||||||||||||  | |  | | || ||||||||||| ||||||||||   ||| | ||||||  |||||  ||||| | ||||||||||    
T  39021091 gaccactgtaaaaacgatatcccacgcctctcatcgtcactactcacacccaaagaaa---cacgcgtcaaaatgaaactctcagtcctcaacaccaaag 39021187  T
Q  242 ttgagccacatccgaaaagctcatatctgaaa-gatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaacc 340  Q
     | ||||||||||||||| |||||||| |||| ||||  ||| || |||||| |||| ||||| ||||||||| |||||| |||||||| || |||||||    
T  39021188 ctaagccacatccgaaaaactcatatccgaaaagatcaatcagctaccaccatctctcgacctccgatccaccaaaagaatctataaaa-gcccaaaacc 39021286  T
Q  341 aaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    | |||| ||||||  ||||||||||||| |||||| |||||    
T  39021287 agacttgatccaaagaactgactcccgacctcgaatcaaaa 39021327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 381
Target Start/End: Original strand, 33143630 - 33144000
Alignment:
Q  20 cggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct------------gaggacaacacccacca-aata 106  Q
    |||||||| ||||||||||| |||||||||   ||||||||||||||||| ||||| ||||||||             ||||| |||| |||||| || |    
T  33143630 cggtgaaactgagaatacaaccaaaaggcgtcatatataggcggaacacccgaaaa-aaacacccaaaaaactcccaagaggataacatccaccataaaa 33143728  T
Q  107 cacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacac 205  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||| | |||||||||||| | | | ||||| |||||||||||||  || ||||| | ||    
T  33143729 cacgtcaccacctaaaacaaactccttcacgaaaaccaccactgaacaaacgatatccaaccccatccgtcgtcactactcacccttaa-gaaaaca-ac 33143826  T
Q  206 ccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttc 305  Q
    |||||| ||| |   | ||| ||  ||||||||||| ||| ||||| |  |||| ||| ||| | | |||||  ||| |||||||||||||  |||||      
T  33143827 ccctcagaaaaa---tcccattccaaaacaccaaagctgatccacaacgaaaaaactcctatataagagatcaatcagcttccaccacctcgcgacctct 33143923  T
Q  306 gatccaccgaaagaaactataaaaagcac-aaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||||||||||||||||| ||||||||| | ||||| || ||| ||||||  |||||||||||||||||||| |||||    
T  33143924 gatccaccgaaagaaaccataaaaagcccaaaaactaatcttgatccaaagaactgactcccgatctcgaatcaaaa 33144000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 4171154 - 4171082
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  4171154 cagagaccggtgaaactgagaatacaaacaaaaggcgtcgtatataggcggaacacctgaaaataaacaccct 4171082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 50518760 - 50519008
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccc------------tgaggacaacaccc-a 99  Q
    ||||||| ||||||| ||||||||||||||||||| |  |||||||||||||||||| ||||||||||||||            ||||||| |||||| |    
T  50518760 cagagactggtgaaactgagaatacaaacaaaaggtgtcgtatataggcggaacacccgaaaataaacaccctaaaaacacccatgaggaccacacccaa 50518859  T
Q  100 ccaaatacacgtcaccacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaa 198  Q
    | |||||||| |||||| |||||||| ||| ||||||  | || ||||||||||||||||||||  | || | || || |||||||||||| ||||||||    
T  50518860 caaaatacacctcaccatctaaaacagactccttcac-gataccaccactgtaaaaacgatatc--taacgatccatcgtcactactcacctccaaagaa 50518956  T
Q  199 aatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccaca 251  Q
    || |||||||| ||||||||| | |  ||| | |||||||||| |||||||||    
T  50518957 aa-acacccctaaaaaataaattcctcgtcctgaacaccaaagctgagccaca 50519008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 381
Target Start/End: Original strand, 14755166 - 14755316
Alignment:
Q  232 aacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaag 331  Q
    |||||||||| |||||||||||| | ||||||||  | |||||||| |||| ||||||||| |||| ||||| ||||||| |||||||||| ||||||||    
T  14755166 aacaccaaagctgagccacatccaacaagctcatccccgaaagatcattcaacttccaccatctctcgacctccgatccatcgaaagaaacaataaaaag 14755265  T
Q  332 cacaaaaccaaact-taatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    | |||| |||| ||  || ||||  |||||||||||||||| ||| |||||    
T  14755266 cccaaatccaacctcgaaaccaaagaactgactcccgatcttgaatcaaaa 14755316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 14893340 - 14893268
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    ||||||| |||||||  |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  14893340 cagagactggtgaaaccgagagtacaaacaaaagacgccgtatataggcggaacacctgaaaataaacaccct 14893268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 128 - 319
Target Start/End: Original strand, 23328150 - 23328337
Alignment:
Q  128 ctcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaaataaacttccagt 227  Q
    ||||| ||| |||| | ||||||||  || |||||||  || |||| || ||||||||||||||||||||    ||||| |||||||  ||||| ||||     
T  23328150 ctcttaacagaaacaaacactgtaagcacaatatccacaaccacccatcgtcactactcacccccaaaga----acaccactcaaaataaaactcccaga 23328245  T
Q  228 cttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaaga 319  Q
    ||| |||||| ||| |||||||||| |||||||||| || | ||| || |    | ||||||| |||||| ||||| |||||||||||||||    
T  23328246 cttcaacacccaagctgagccacattcgaaaagctcctaaccgaatgaacaaggagcttccacaacctctcgacctccgatccaccgaaaga 23328337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 296
Target Start/End: Original strand, 37998971 - 37999125
Alignment:
Q  137 aaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacac 236  Q
    |||||||||||||| |||||||||||||  || || | || |||| ||||||    ||| |||| |||||| | |||| ||||||||| ||| |||||||    
T  37998971 aaaacgaccactgttaaaacgatatcca--accactcatcgtcaccactcaca---aaaaaaaaaacacccattaaaattaaacttcccgtcctaaacac 37999065  T
Q  237 caaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctc 296  Q
    ||||||||| |||| ||| |||||||| ||||  |||||||  | | |||||||||||||    
T  37999066 caaagttgatccacctccaaaaagctcctatccaaaagatcaattagcttccaccacctc 37999125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 14194340 - 14194210
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccc------------tgaggacaacacccac 100  Q
    |||||||| |||||| |||||| |||||||||||| ||  ||||||||||||||| | ||||||||||| ||            ||||||| ||||||||    
T  14194340 cagagaccagtgaaactgagaacacaaacaaaaggtgccttatataggcggaacatccgaaaataaacatcctaaaaacactcatgaggaccacacccac 14194241  T
Q  101 c-aaatacacgtcaccacctaaaacaaactc 130  Q
    | |||||||||||||||||||||||| ||||    
T  14194240 caaaatacacgtcaccacctaaaacagactc 14194210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 25594304 - 25594384
Alignment:
Q  85 tgaggacaacacccacca-aatacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatcca 164  Q
    |||||||||||||||||| |||| || |||| |||||||||| |||| ||||||||| ||||||||| ||||||||||||||    
T  25594304 tgaggacaacacccaccacaataaacatcactacctaaaacatactccttcacaaaa-cgaccactgaaaaaacgatatcca 25594384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 14280230 - 14280344
Alignment:
Q  23 tgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacac-----------cctgaggacaacacccac-caaatacacg 110  Q
    ||||| ||| ||||||||  |||||||| |||||||||||||||||| |||| |||||||           ||||||||||||||||||  |||||||||    
T  14280230 tgaaactgataatacaaattaaaggcgccgtatataggcggaacacccgaaagtaaacactctgaaaatatcctgaggacaacacccactaaaatacacg 14280329  T
Q  111 tcaccacctaaaaca 125  Q
    |||||||||||||||    
T  14280330 tcaccacctaaaaca 14280344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 14754963 - 14755010
Alignment:
Q  22 gtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacc 69  Q
    |||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  14754963 gtgaaattgagaatacaaactaaaggcgccgtacataggcggaacacc 14755010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 46358073 - 46358123
Alignment:
Q  33 aatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    ||||||||| |||| ||| ||||||||||| ||||||||||||||||||||    
T  46358073 aatacaaactaaagacgctgtatataggcgaaacacctgaaaataaacacc 46358123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 16266147 - 16266099
Alignment:
Q  30 gagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataa 78  Q
    ||||||||||||| ||| | ||||||||||||| |||||||||||||||    
T  16266147 gagaatacaaacacaagccacagtatataggcgaaacacctgaaaataa 16266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 319
Target Start/End: Complemental strand, 45399027 - 45398890
Alignment:
Q  178 tcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatc 277  Q
    ||||||||||||||||| |||    |||||| |||||   |||| |||  ||| |||||| |||||| ||||||| ||||||||||||| | ||| || |    
T  45399027 tcactactcacccccaacgaa----caccccacaaaatagaactcccaaacttcaacacctaagttgcgccacattcgaaaagctcataaccgaatgaac 45398932  T
Q  278 gttcatcttccaccacctcttgaccttcgatccaccgaaaga 319  Q
     | || ||||||| |||||| ||||| ||||||| |||||||    
T  45398931 atgcagcttccacaacctctcgacctccgatccatcgaaaga 45398890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 48893105 - 48893189
Alignment:
Q  82 ccctgaggacaacacccacc-aaatacacgtcaccacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatcca 164  Q
    |||||| ||||||||||||| ||||||| |||||||||||||| | ||| ||| ||||||||||  || |||||||| |||||||    
T  48893105 ccctgaagacaacacccaccaaaatacatgtcaccacctaaaagagactcctttacaaaaacgattacggtaaaaacaatatcca 48893189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 1652827 - 1652937
Alignment:
Q  271 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaacaaactgactcccgat 369  Q
    ||||||| |||| ||||| ||||| ||| |||| || ||||||||||||| || | ||||||| ||||||||||||| | ||||  |||| ||||| |||    
T  1652827 aaagatcattcaacttccgccaccgcttaacctccggtccaccgaaagaacacca-aaaaagcccaaaaccaaacttgaaccaaagaactaactcctgat 1652925  T
Q  370 ctcgaaacaaaa 381  Q
    |||||| |||||    
T  1652926 ctcgaatcaaaa 1652937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 253
Target Start/End: Complemental strand, 4171070 - 4170902
Alignment:
Q  85 tgaggacaacacccaccaaa--tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcac 181  Q
    |||||||||||||||| |||  || |||||| ||||||||| | |||| ||||| |||| ||||| |||| ||| ||||||||  || | || || ||||    
T  4171070 tgaggacaacacccacaaaaaatatacgtcatcacctaaaatagactccttcacgaaaatgaccattgtataaatgatatcca--accatccatcgtcac 4170973  T
Q  182 tactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatc 253  Q
    |||||||||||    |||| ||||||||||||   |||||  ||||| | |||||||||| |||||||||||    
T  4170972 tactcacccccttctaaaa-acacccctcaaagtaaaactctcagtccttaacaccaaagctgagccacatc 4170902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 32010180 - 32010127
Alignment:
Q  30 gagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    |||||||||| | ||| |||  |||||||||||||| |||||||||||||||||    
T  32010180 gagaatacaacctaaaagcgtcgtatataggcggaatacctgaaaataaacacc 32010127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 823192 - 823306
Alignment:
Q  85 tgaggacaacacccaccaaa-tacacgtcaccacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcact 182  Q
    |||||||| ||||||||||| |  || ||||||||||||||||||| | |||| ||||| ||||||| ||||||||||||||| || |||| ||  | ||    
T  823192 tgaggacatcacccaccaaaattaacttcaccacctaaaacaaactccatcac-aaaacaaccactg-aaaaacgatatccataaccacccttcgcctct 823289  T
Q  183 actcacccccaaagaaa 199  Q
    ||||||||  |||||||    
T  823290 actcaccctaaaagaaa 823306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 381
Target Start/End: Complemental strand, 5556696 - 5556600
Alignment:
Q  286 tccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||||||||||||  |||| || |||||||||||||    | |||||| |||||||||| ||| | ||||  |||||||||||||||||||| |||||    
T  5556696 tccaccacctctaaacctccggtccaccgaaagaacacctgaaaagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgaatcaaaa 5556600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 41039527 - 41039495
Alignment:
Q  53 tatataggcggaacacctgaaaataaacaccct 85  Q
    ||||||||||||||||| |||||||||||||||    
T  41039527 tatataggcggaacaccagaaaataaacaccct 41039495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 3e-64; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 32 - 375
Target Start/End: Complemental strand, 34230592 - 34230237
Alignment:
Q  32 gaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaaca------------ccctgaggacaacacccaccaaa-tacacgtcaccacc 118  Q
    ||||||||||||||| ||| ||||||||||||||||||  ||||||||||            |||| || |||||| |||||||| |||||||||||| |    
T  34230592 gaatacaaacaaaagacgccgtatataggcggaacaccaaaaaataaacatcgtaaaaacaccccttagaacaacatccaccaaaatacacgtcaccatc 34230493  T
Q  119 taaaacaaactcttc-acaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaaata 217  Q
    |||| || ||||||| || |||||||||||| ||||||||||||||| ||  |||||||   |||||||||| |||||||||| |||||| | ||||| |    
T  34230492 taaa-cagactcttccacgaaaacgaccactataaaaacgatatccaacaacacccgtcgcaactactcacctccaaagaaaaaacacccataaaaaaaa 34230394  T
Q  218 aacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaa 317  Q
    || ||| |||| |||||||||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||||||||||  |||| |||||||||||||    
T  34230393 aaattc-agtcctaaacaccaaagttgagccacatctgaaaagctcttatttgaaagatcattcagcttccaccacctctcaacctccgatccaccgaaa 34230295  T
Q  318 gaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaa 375  Q
    ||||| | ||||||| ||||| ||||||| ||||||  |||||||||| |||||||||    
T  34230294 gaaaccacaaaaagcccaaaatcaaacttgatccaaagaactgactcctgatctcgaa 34230237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 381
Target Start/End: Complemental strand, 7696371 - 7695993
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct------------gaggacaacacccac 100  Q
    ||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||  |||||||||||| |            |||||||||||||||    
T  7696371 cagagaccgatgaaattgagaatacaaacaaaaggaaccgtatataggcggaacacccaaaaataaacaccttaaaaacacccccgaggacaacacccac 7696272  T
Q  101 caaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaa 198  Q
    |||| ||||| ||||||||||||| |||||| ||||| |||||||||| |||||||| ||||| ||  || || | || ||||||||||| |||  ||||    
T  7696271 caaaatacacatcaccacctaaaataaactccttcacgaaaacgaccaatgtaaaaatgatattca--accactcatcgtcactactcactcccttagaa 7696174  T
Q  199 aatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctctt 298  Q
    || |||||||| ||||  ||||| |  ||| | |||||||||||||||||||||||  ||| ||| |||| |||||||| |||| |||||||||||||      
T  7696173 aa-acacccctaaaaataaaactcctggtcctgaacaccaaagttgagccacatcctcaaatctcctatccgaaagatcattcagcttccaccacctccc 7696075  T
Q  299 gaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||||||||||||||||||||||||  | |||||| ||||||| ||||| | ||||  |||||||||||| | ||||| |||||    
T  7696074 gaccttcgatccaccgaaagaaaccgt-aaaagcccaaaacctaacttgagccaaagaactgactcccggtatcgaatcaaaa 7695993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 12343215 - 12342992
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccctgaggacaacaccca-ccaaatacacgt 111  Q
    |||||||||  |||||||||||||||||| |||| ||   || | |||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||    
T  12343215 cagagaccgacgaaattgagaatacaaactaaagacgtcttacaaaggcggaacacccgaaaataaacaccctgaggacaacatccatcaaaatacacgt 12343116  T
Q  112 caccacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctc 210  Q
    |||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||  || || | || ||||||||||||||| |||||   |||||||||    
T  12343115 caccacctaaaacagactccttcacgaaaacgacctctgtaaaaacgatatcca--accactcatcgtcactactcaccccccaagaa---acacccctc 12343021  T
Q  211 aaaaataaacttccagtcttaaacaccaa 239  Q
    ||||||||||| |||||| | ||||||||    
T  12343020 aaaaataaactcccagtcctcaacaccaa 12342992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 89 - 381
Target Start/End: Original strand, 16952143 - 16952434
Alignment:
Q  89 gacaacacccaccaaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgacc-actgtaaaaacgatatccatcacaacccgtcatcactactc 186  Q
    |||||||||||| ||||| || ||||||| ||||||| || | ||||| ||||| | | |||| ||||| ||||| |||||| || | || |||||||||    
T  16952143 gacaacacccacaaaataaacatcaccacttaaaacagacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactactc 16952242  T
Q  187 acccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatctt 286  Q
    ||||||||||||    |||||||| |||  ||||| |||||| | |||||||||||||| ||||||||||||||||| |||| ||||||||||| | |||    
T  16952243 acccccaaagaa----cacccctctaaatgaaactcccagtcctcaacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagctt 16952338  T
Q  287 ccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||||||||  |||| |||||||||||||||| || | |||| |  ||||||||||||| | ||||  ||||| |||||||||||||| |||||    
T  16952339 ccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 16952434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 89 - 381
Target Start/End: Original strand, 17022808 - 17023099
Alignment:
Q  89 gacaacacccaccaaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgacc-actgtaaaaacgatatccatcacaacccgtcatcactactc 186  Q
    |||||||||||| ||||| || ||||||| ||||||| || | ||||| ||||| | | |||| ||||| ||||| |||||| || | || |||||||||    
T  17022808 gacaacacccacaaaataaacatcaccacttaaaacagacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactactc 17022907  T
Q  187 acccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatctt 286  Q
    ||||||||||||    |||||||| |||  ||||| |||||| | |||||||||||||| ||||||||||||||||| |||| ||||||||||| | |||    
T  17022908 acccccaaagaa----cacccctctaaatgaaactcccagtcctcaacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagctt 17023003  T
Q  287 ccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||||||||  |||| |||||||||||||||| || | |||| |  ||||||||||||| | ||||  ||||| |||||||||||||| |||||    
T  17023004 ccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17023099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 89 - 381
Target Start/End: Original strand, 17060114 - 17060405
Alignment:
Q  89 gacaacacccaccaaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgacc-actgtaaaaacgatatccatcacaacccgtcatcactactc 186  Q
    |||||||||||| ||||| || ||||||| ||||||| || | ||||| ||||| | | |||| ||||| ||||| |||||| || | || |||||||||    
T  17060114 gacaacacccacaaaataaacatcaccacttaaaacagacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactactc 17060213  T
Q  187 acccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatctt 286  Q
    ||||||||||||    |||||||| |||  ||||| |||||| | |||||||||||||| ||||||||||||||||| |||| ||||||||||| | |||    
T  17060214 acccccaaagaa----cacccctctaaatgaaactcccagtcctcaacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagctt 17060309  T
Q  287 ccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||||||||  |||| |||||||||||||||| || | |||| |  ||||||||||||| | ||||  ||||| |||||||||||||| |||||    
T  17060310 ccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaa 17060405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 33 - 381
Target Start/End: Original strand, 10173270 - 10173629
Alignment:
Q  33 aatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-------------gaggacaacacccaccaaa-tacacgtcaccacc 118  Q
    ||||||||| ||| |||  ||||||||||||||||||||||||||||||||||             |||||||| ||||| |||| |||| |||||  ||    
T  10173270 aatacaaactaaaagcgttgtatataggcggaacacctgaaaataaacaccctaaaagatacctctgaggacaatacccatcaaaatacatgtcacggcc 10173369  T
Q  119 taaaacaaac-tcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaaata 217  Q
    ||||||| || ||||||  |||||||| |||||||||||||||| || ||| || | || |||||||||||||| |||||| |    | |||||||| ||    
T  10173370 taaaacagacgtcttcatgaaaacgactactgtaaaaacgatatacaacaccactcatcgtcactactcacccc-aaagaata----ctcctcaaaatta 10173464  T
Q  218 aacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaa 317  Q
    ||||  ||||| | |||||||||| |||||||||||||||||||||||||   ||||||| |||| |||||||||||||| ||||| |||| ||||||||    
T  10173465 aactctcagtcctcaacaccaaagctgagccacatccgaaaagctcatattcaaaagatcattcaacttccaccacctctcgacctccgattcaccgaaa 10173564  T
Q  318 gaa-actataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||| || |  |||||| ||||||||||||| | ||||  |||| ||| ||||||||||| |||||    
T  10173565 gaacaccaacaaaagcccaaaaccaaacttgagccaaataacttacttccgatctcgaatcaaaa 10173629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 343
Target Start/End: Original strand, 37770324 - 37770654
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-----------gaggacaacacccacc 101  Q
    |||||| |||||||  |||||||||||||||   |||  |||||||||||||||||| |||||||||||||||           ||||| | ||||||||    
T  37770324 cagagatcggtgaatatgagaatacaaacaa---gcgtcgtatataggcggaacacccgaaaataaacaccctaaaaacaccatgaggataccacccacc 37770420  T
Q  102 aaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaa 199  Q
    ||| | ||||||||||||||||||| |||| ||||| ||||| |||||| |||        |||| ||| ||||||| ||||||||| ||||||||||||    
T  37770421 aaaatccacgtcaccacctaaaacagactccttcacgaaaaccaccactataa--------tccaacaccacccgtcgtcactactcgcccccaaagaaa 37770512  T
Q  200 atacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttg 299  Q
    | || |||||||||| ||||||  ||| | | ||||||||||  ||||||| || ||||||||||||||||||||||| |||| |||||| ||||||| |    
T  37770513 aaac-cccctcaaaattaaactcacagacctgaacaccaaagccgagccacctcagaaaagctcatatctgaaagatcattcagcttccaacacctctcg 37770611  T
Q  300 accttcgatccaccgaaagaaactataaaaagcacaaaaccaaa 343  Q
    |||| |||| ||||||||||||| || |||||| ||||||||||    
T  37770612 acctccgattcaccgaaagaaaccat-aaaagcccaaaaccaaa 37770654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 345
Target Start/End: Original strand, 41086475 - 41086812
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccctgaggacaacacccaccaaatacacgtc 112  Q
    |||||||| |||||| |||| ||||||| |||| ||   ||||||||||| |||||| ||||||||| ||||| |  ||| | |  |  | | |||||||    
T  41086475 cagagaccagtgaaactgagcatacaaagaaaaagcatcgtatataggcgaaacacccgaaaataaataccctaaaaacacccctgaagaca-acacgtc 41086573  T
Q  113 accacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactca----cccccaaagaaaatacaccc 207  Q
    ||||||||||||| || | || || ||| |||||||| |||||||||||||||  || |||| || |||||||||     ||||||||||||| ||||||    
T  41086574 accacctaaaacagaccccttaacgaaagcgaccactctaaaaacgatatccaataccacccatcgtcactactcctcaccccccaaagaaaaaacaccc 41086673  T
Q  208 ctcaaaaataaacttccagtctt-aaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcg 306  Q
    |||||||  |||||  || || | |||| ||||||| ||| ||||||| |||||||| |||| |||||||| |||| |||||||||||||| ||||| ||    
T  41086674 ctcaaaatcaaactcgcaatcctgaaactccaaagtagagtcacatccaaaaagctcttatccgaaagatcattcagcttccaccacctctcgacctccg 41086773  T
Q  307 atccaccgaaagaaactataaaaagcacaaaaccaaact 345  Q
    |||||||||||| ||| ||||||||| ||||||||||||    
T  41086774 atccaccgaaaggaaccataaaaagcccaaaaccaaact 41086812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 381
Target Start/End: Complemental strand, 1269786 - 1269513
Alignment:
Q  102 aaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaa 200  Q
    |||||||| ||||||||||||||||| || ||| |  |||||||| || |||||||||||||||  || |||| || ||||||||| ||||  ||||||     
T  1269786 aaatacacatcaccacctaaaacaaattccttctcggaaacgacctctataaaaacgatatcca--accacccatcgtcactactcgcccc--aagaaat 1269691  T
Q  201 tacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaa-gatcgttcatcttccaccacctcttg 299  Q
       |||| | ||||||||||||| | || | ||||||||||  ||||||||| |||||||||| |||| |||| |||  |||| ||||||||| |||| |    
T  1269690 ---accctttaaaaataaacttcaa-tcctcaacaccaaagcagagccacattcgaaaagctcctatccgaaaagattattcagcttccaccaactctcg 1269595  T
Q  300 accttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||| |||||||| ||||||||| ||||||| | ||||||||||||| | ||||  |||||||| ||||||||||| |||||    
T  1269594 acctccgatccactgaaagaaaccataaaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaa 1269513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 13337660 - 13337588
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    |||||||||||||||  ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  13337660 cagagaccggtgaaacagagaatacaaacaaaaggcgtcgtatataggtggaacacctgaaaataaacaccct 13337588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 4975155 - 4974990
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccctga-------------ggacaacaccca 99  Q
    |||||||  |||||| | ||||||||||| |||||||  |||||||||| ||||||| |||||||||||||||||             ||| ||||||||    
T  4975155 cagagactagtgaaactaagaatacaaactaaaggcgtcgtatataggctgaacacccgaaaataaacaccctgaaaaacatccttgaggataacaccca 4975056  T
Q  100 ccaaat-acacgtcaccacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatcc 163  Q
    |||||| ||||  |||||||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  4975055 ccaaattacacaccaccacctaaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcc 4974990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 4993063 - 4992898
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccctga-------------ggacaacaccca 99  Q
    |||||||  |||||| | ||||||||||| |||||||  |||||||||| ||||||| |||||||||||||||||             ||| ||||||||    
T  4993063 cagagactagtgaaactaagaatacaaactaaaggcgtcgtatataggctgaacacccgaaaataaacaccctgaaaaacatccttgaggataacaccca 4992964  T
Q  100 ccaaat-acacgtcaccacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatcc 163  Q
    |||||| ||||  |||||||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  4992963 ccaaattacacaccaccacctaaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcc 4992898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 319
Target Start/End: Original strand, 14106372 - 14106509
Alignment:
Q  178 tcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatc 277  Q
    |||||||||||||||||||||    ||||||||||||  |||||  ||| ||| |||||| ||| |||||||||| || ||||||| || | ||| ||||    
T  14106372 tcactactcacccccaaagaa----cacccctcaaaataaaactctcagacttcaacacccaagctgagccacattcgtaaagctcttaaccgaatgatc 14106467  T
Q  278 gttcatcttccaccacctcttgaccttcgatccaccgaaaga 319  Q
     | || ||||||| |||||| |||||  ||||||||||||||    
T  14106468 atacaacttccacaacctctcgacctctgatccaccgaaaga 14106509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 381
Target Start/End: Complemental strand, 13337427 - 13337304
Alignment:
Q  258 aagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaa 357  Q
    |||||| ||||||||||||| ||||   | |||||||||| ||||| | |||||||||||||||| ||||||||  ||||||| ||||| |  |||  ||    
T  13337427 aagctcctatctgaaagatcattcagtgttcaccacctctcgacctcctatccaccgaaagaaaccataaaaagtccaaaacctaacttgagtcaaagaa 13337328  T
Q  358 ctgactcccgatctcgaaacaaaa 381  Q
    |||||| ||||| ||||| |||||    
T  13337327 ctgacttccgatttcgaatcaaaa 13337304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 33788296 - 33788362
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaa 79  Q
    ||||||||||||| |  |||||||||||| |||||||| ||||||| |||||||||| |||||||||    
T  33788296 cagagaccggtgataccgagaatacaaactaaaggcgccgtatatatgcggaacacccgaaaataaa 33788362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 29997355 - 29997287
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaaca 81  Q
    ||||||||| ||||||||| |||| ||||||||||| | ||||||| |||||||| | |||||||||||    
T  29997355 cagagaccgatgaaattgaaaataaaaacaaaaggcaccgtatataagcggaacatccgaaaataaaca 29997287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 41113412 - 41113483
Alignment:
Q  14 agagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    |||||||||||||| ||||||||||||| |||| |   |||||||||||||||| | ||||||||| |||||    
T  41113412 agagaccggtgaaactgagaatacaaactaaagacattgtatataggcggaacatccgaaaataaataccct 41113483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 22884802 - 22884852
Alignment:
Q  30 gagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaac 80  Q
    |||||||||||| |||||||  |||||||||||||||||| ||||||||||    
T  22884802 gagaatacaaactaaaggcgtcgtatataggcggaacacccgaaaataaac 22884852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 25504576 - 25504629
Alignment:
Q  30 gagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    ||||||||||||||||||||| |||||||| || ||||||  ||||||||||||    
T  25504576 gagaatacaaacaaaaggcgccgtatatagacgaaacacccaaaaataaacacc 25504629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 24165855 - 24165917
Alignment:
Q  21 ggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    ||||||||||| |||||| || |||| | | |||||||||||||||||| ||||| |||||||    
T  24165855 ggtgaaattgataatacagactaaagacactgtatataggcggaacacccgaaaacaaacacc 24165917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 4472336 - 4472283
Alignment:
Q  30 gagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    |||||||||||| |||||||  |||||||| ||||||| | |||||||||||||    
T  4472336 gagaatacaaactaaaggcgtcgtatatagacggaacatccgaaaataaacacc 4472283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 387488 - 387385
Alignment:
Q  95 acccaccaaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcaccccca 193  Q
    |||||||||| |||| ||||||||||||||| |||| ||||||||||| | || |||||| || | || || |||  ||| || |||||| |||||||||    
T  387488 acccaccaaa-acacatcaccacctaaaacagactccttcacaaaaacaagcattgtaaacacaaaattcaccaccgcccatcgtcactattcaccccca 387390  T
Q  194 aagaa 198  Q
    |||||    
T  387389 aagaa 387385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 33533415 - 33533467
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaa 65  Q
    ||||||| ||||||| | || |||||||||||||||||  |||||||||||||    
T  33533415 cagagactggtgaaactaaggatacaaacaaaaggcgccatatataggcggaa 33533467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 1e-63; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 13 - 381
Target Start/End: Original strand, 26045634 - 26046015
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-------------gaggacaacaccca 99  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||| |  ||||||||||||||             ||||||||||||||    
T  26045634 cagagaccggtgaagttgagcatacaaacaaaaggcgccgtatatagacggaacatccaaaaataaacaccctaaaaaacgcccctgaggacaacaccca 26045733  T
Q  100 ccaaa-tacacgtcaccacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaaga 197  Q
    ||||| | ||||||||||||||||||| ||| |||||  |||| |||||| |||||||||| ||||| |||  ||| || |||||||||||||| |||||    
T  26045734 ccaaaattcacgtcaccacctaaaacagacttcttcatgaaaatgaccacggtaaaaacgaaatccaacacctcccatcgtcactactcacccc-aaaga 26045832  T
Q  198 aaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctct 297  Q
    ||| ||||||||||||| ||||||  || || ||||||||||||||||| ||| ||||||||||||||||||||||||||  ||| |||||||  |||      
T  26045833 aaa-acacccctcaaaattaaactctcaatcctaaacaccaaagttgagtcacctccgaaaagctcatatctgaaagatcaatcagcttccacagcctaa 26045931  T
Q  298 tgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
     ||||| |||||| |||| |||||| ||||||||  ||||||||||||| | |||| | ||| ||||||||||||||| |||||    
T  26045932 cgacctccgatcccccgagagaaaccataaaaagtccaaaaccaaacttgagccaaaacactaactcccgatctcgaatcaaaa 26046015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 381
Target Start/End: Complemental strand, 8297880 - 8297498
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct------------gaggacaacacccac 100  Q
    ||||||||||||||| |||||||||||| ||||||||  ||| |||||||||||||||||||||| |||||||            ||||| |||| ||||    
T  8297880 cagagaccggtgaaactgagaatacaaa-aaaaggcgttgtacataggcggaacacctgaaaatacacaccctaaaaacacccctgaggataacatccac 8297782  T
Q  101 caaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcac----ccccaa 194  Q
    |||| ||||| ||||||||||||||| |||| ||||  |||| ||||| |||||||||||| ||||  || |||  || |||||||||||    ||||||    
T  8297781 caaaatacacatcaccacctaaaacacactccttcaagaaaaagaccaatgtaaaaacgatttcca--accacctatcgtcactactcactcacccccaa 8297684  T
Q  195 agaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacc 294  Q
    |||||| ||||||||||||| |||||| ||  || | |||||||||   |||||||||||||||||||| |||| |||||| | |||| |||||||||||    
T  8297683 agaaaa-acacccctcaaaattaaactccccatcatgaacaccaaaaccgagccacatccgaaaagctcctatccgaaagaccattcaacttccaccacc 8297585  T
Q  295 tcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||  ||||| |||| ||||||||||||| ||||||||  ||||||||||||| | ||||  |||||||||||||||||||| |||||    
T  8297584 tcacgacctccgattcaccgaaagaaaccataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 8297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 82 - 381
Target Start/End: Original strand, 14302196 - 14302481
Alignment:
Q  82 ccctgaggacaacacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatc 179  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| | || ||| | |||||||||| ||||||||||||||||| ||| ||| ||| ||    
T  14302196 ccctgatgacaacacccaccaaaatacacgtcaccacctaaaacagattccttcgcgaaaacgaccaatgtaaaaacgatatccaacaccacctgtcgtc 14302295  T
Q  180 actactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgt 279  Q
    |||||||| |||||||||||| | ||||||||||| |||||| ||| || | |||||||||| |||||               |||||| |||||||| |    
T  14302296 actactcatccccaaagaaaa-atacccctcaaaattaaactcccactcctgaacaccaaagctgagc---------------catatccgaaagatcat 14302379  T
Q  280 tcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaa 379  Q
     || |||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||||||  |||||  ||||||||||| |||||||| |||    
T  14302380 gcagcttccaccacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgctccaaagaactgactcccaatctcgaaccaa 14302479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 114 - 381
Target Start/End: Original strand, 33258665 - 33258933
Alignment:
Q  114 ccacctaaaacaaa-ctcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaa 212  Q
    |||||||||||| | |||||||| ||| ||||||||||||||||||||||||  || | || ||  ||||||||||||| |||||||| ||||||| |||    
T  33258665 ccacctaaaacagatctcttcacgaaagcgaccactgtaaaaacgatatccaataccatccatcgccactactcacccctaaagaaaaaacaccccacaa 33258764  T
Q  213 aaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccac 312  Q
    ||| ||||| | || | | |||||||||| |||||||||||| | |||||| |  |||| | ||| |||| ||||||| | |||| ||||| ||||||||    
T  33258765 aaacaaactcctagacctgaacaccaaagctgagccacatccaacaagctcctccctgagaaatcattcagcttccactatctctcgacctccgatccac 33258864  T
Q  313 cgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||||||| ||||||||| |||| |||| ||  | ||||  |||| ||||| ||||||||| |||||    
T  33258865 cgaaagaaaccataaaaagcccaaatccaacctcgaaccaaagaactaactcctgatctcgaatcaaaa 33258933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 297
Target Start/End: Original strand, 26405222 - 26405512
Alignment:
Q  16 agaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaaca------------ccctgaggacaacacccacc-a 102  Q
    |||||||||||| |||||||||||||||||||||  |||||||| ||||||||| |||||||||||            |||||||||||||| ||||| |    
T  26405222 agaccggtgaaactgagaatacaaacaaaaggcgtcgtatatagtcggaacacccgaaaataaacaccttaaaaacacccctgaggacaacaaccaccaa 26405321  T
Q  103 aatacacgtcaccacctaaaacaaac-tcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaat 201  Q
    ||||||||||||||||||||||| || ||||||   ||| || |||||| ||||| |||||||  |  |||| || |||||||||| || |||||||||     
T  26405322 aatacacgtcaccacctaaaacagacttcttcatggaaatga-cactgttaaaaccatatcca--atcacccatcgtcactactca-cctcaaagaaaa- 26405416  T
Q  202 acacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctct 297  Q
    |||| | |||||| |||||| |  ||| | ||||||||||| ||||||| ||||||||||||||||| |||||| |  ||| ||||||||||||||    
T  26405417 acactcatcaaaattaaactcctcgtcctgaacaccaaagtcgagccacctccgaaaagctcatatccgaaagaccaatcagcttccaccacctct 26405512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 381
Target Start/End: Original strand, 7195122 - 7195290
Alignment:
Q  212 aaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatcca 311  Q
    ||||||||  ||||||| | || ||||||| ||||||||||||| ||||||| ||||  ||||||  |||| ||||||| |||||| ||||| |||||||    
T  7195122 aaaataaaactccagtcctgaataccaaagctgagccacatccgcaaagctcctatccaaaagattattcagcttccacgacctctcgacctccgatcca 7195221  T
Q  312 ccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||| |||| || |||||| ||||  | ||||| | ||||  |||||||||||||||||||| |||||    
T  7195222 ccgaaaaaaaccat-aaaagcccaaactctaacttgagccaaagaactgactcccgatctcgaatcaaaa 7195290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 10175089 - 10174925
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaa----------ataaacacc-ctgaggacaacacccacc 101  Q
    ||||||||||||||||| ||||||||||||||||||   ||||||||||  |||||||||||          | ||||||| | ||||||||||||||||    
T  10175089 cagagaccggtgaaattaagaatacaaacaaaaggcatcgtatataggcaaaacacctgaaataaacatcctaaaaacacctccgaggacaacacccacc 10174990  T
Q  102 aaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatcca 164  Q
    ||| ||||||| ||||||||||||| |||| |||  |||||||||||| ||||||||||||||||    
T  10174989 aaagtacacgtaaccacctaaaacagactccttctaaaaaacgaccacggtaaaaacgatatcca 10174925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 381
Target Start/End: Original strand, 13953928 - 13954285
Alignment:
Q  22 gtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaaca-------------ccctgaggacaacacccacc-aaatac 107  Q
    |||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||||||||             || |||||||||| |||||| ||||||    
T  13953928 gtgaaactgagagtacaaactaaaggcgccgtatataggcggaacacctgaaaataaacaccttaaaaaatacccttgaggacaactcccaccaaaatac 13954027  T
Q  108 acgtcaccacctaaaacaaac-tcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacc 206  Q
    | |||| | ||||||||| || | ||||  || ||||| ||||||||||| ||||||  ||  |||| || |||| |||| ||||||| |||   |||||    
T  13954028 atgtcatctcctaaaacagactttttcatgaagacgactactgtaaaaacaatatcccacatcacccatcgtcacaactctcccccaacgaa---acacc 13954124  T
Q  207 cctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcg 306  Q
    |||| ||| |||||| |||||| | ||| |||||| ||||||||||||||              |||||||  |||  ||||||||||| |  || | ||    
T  13954125 cctctaaattaaactcccagtcctcaacgccaaagctgagccacatccga--------------aaagatcaatcagtttccaccacctttcaacttccg 13954210  T
Q  307 atccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||||||||||||||| ||||||||| ||||||||||||| | ||||   | ||||||||||||||||| |||||    
T  13954211 atccaccgaaagaaaccataaaaagcccaaaaccaaacttgagccaaagtaatgactcccgatctcgaatcaaaa 13954285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 381
Target Start/End: Complemental strand, 25992411 - 25992037
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-----------gaggacaacacccacc 101  Q
    ||||||||||||||| ||| |||||||||||||||||| ||||||| |||||||||| || ||||||||||||            | |||||||||||||    
T  25992411 cagagaccggtgaaaatgataatacaaacaaaaggcgccgtatatatgcggaacacccgacaataaacaccctaaaaacaccccaatgacaacacccacc 25992312  T
Q  102 aaatacacgtcaccacctaaaaca-aactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcacta--ctcacccccaaagaa 198  Q
    |||         |||||||||||| | | |||||| ||| | ||||||||||||||||||||||  || |||| ||  |||||  ||| |||||||||||    
T  25992311 aaa-------atccacctaaaacagaccccttcacgaaagcaaccactgtaaaaacgatatccaataccacccatcgccactactctcgcccccaaagaa 25992219  T
Q  199 aatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctctt 298  Q
    || | ||||||| |||| ||||| | |||| | ||||||||||  ||||||| | | |||||||  |  | |||||||| || | |||||| || |||      
T  25992218 aaaatacccctc-aaaacaaactcctagtcctgaacaccaaagcagagccacctacaaaaagcttctccccgaaagatcattaagcttccaacatctcac 25992120  T
Q  299 gaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||||| ||||||| |||||||||  ||||||||| ||||||||| ||  | | ||  ||||||||| |||||||||| |||||    
T  25992119 gacctccgatccatcgaaagaaatcataaaaagcccaaaaccaacctcgagctaaagaactgactctcgatctcgaatcaaaa 25992037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 82 - 247
Target Start/End: Original strand, 21398072 - 21398236
Alignment:
Q  82 ccctgaggacaacacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatc 179  Q
    |||||||||||||||  || ||| |||||||||||| |||||||| || | ||||| ||||| |||  ||||||||||||||||  ||| |||| |||||    
T  21398072 ccctgaggacaacacttacaaaaatacacgtcaccatctaaaacagacgccttcacgaaaacaacctttgtaaaaacgatatcccgcaccacccatcatc 21398171  T
Q  180 actactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagc 247  Q
    | ||||||||||||| |||   ||| ||||| |||||||||| | |||| | ||||||||||||||||    
T  21398172 agtactcacccccaacgaa---acaaccctctaaaataaactcctagtcctcaacaccaaagttgagc 21398236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 33109957 - 33110034
Alignment:
Q  89 gacaacacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatcca 164  Q
    |||||||||||||||| ||||||||| |||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  33109957 gacaacacccaccaaaatacacgtcatcacctaaaacaaaccccttcacgaaaacgaccactgtaaaaacgatatcca 33110034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 21402778 - 21402882
Alignment:
Q  271 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatc 370  Q
    |||||||  ||| ||||||||||||||  |||| | |||||||||||||||| ||||||||| ||||||||||| | |  |||  |||||||||||||||    
T  21402778 aaagatcaatcaacttccaccacctctcaacctccaatccaccgaaagaaaccataaaaagctcaaaaccaaacctgagtcaaagaactgactcccgatc 21402877  T
Q  371 tcgaa 375  Q
    |||||    
T  21402878 tcgaa 21402882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 5187355 - 5187282
Alignment:
Q  10 gagcagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||||||  | | |||| |||||||||||||    
T  5187355 gagcagagatcggtgaaattgagaatacaaacaaaaggcgccgcatatagatgaagcacccgaaaataaacacc 5187282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 7682960 - 7682806
Alignment:
Q  16 agaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccc------------tgaggacaacacccaccaa 103  Q
    |||| ||||||| ||||||||||||  |||||||  |||||||||||||||| | |||||||| |||||            |||| ||||||||||||||    
T  7682960 agacgggtgaaactgagaatacaaattaaaggcgtcgtatataggcggaacatccgaaaataagcacccaaaaaatacttatgagaacaacacccaccaa 7682861  T
Q  104 a-tacacgtcaccacctaaaacaaactctt-cacaaaaacgaccactgtaaaaac 156  Q
    | ||||| ||||||||||||| | |||||| ||||||||||||||| ||||||||    
T  7682860 aatacacatcaccacctaaaatagactctttcacaaaaacgaccaccgtaaaaac 7682806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 7161783 - 7161886
Alignment:
Q  95 acccaccaaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcaccccca 193  Q
    |||||||||| |||| |||| |||||||||| |||| ||||||||||| | ||||||||| ||||| |||| ||| ||||  | ||||||||||||||||    
T  7161783 acccaccaaa-acacatcactacctaaaacagactccttcacaaaaacaagcactgtaaacacgatttccaccaccacccaacgtcactactcaccccca 7161881  T
Q  194 aagaa 198  Q
    |||||    
T  7161882 aagaa 7161886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 30097725 - 30097671
Alignment:
Q  31 agaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    ||||||||||| |||| ||| |||||||||||||||||| |||||||||||||||    
T  30097725 agaatacaaactaaagacgccgtatataggcggaacacccgaaaataaacaccct 30097671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 33258560 - 33258630
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    ||||||||||||||||||  |||||||| ||||||||| ||||||| | | |||||| |||||||||||||    
T  33258560 cagagaccggtgaaattggaaatacaaataaaaggcgccgtatatatgtgaaacacccgaaaataaacacc 33258630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 7391745 - 7391881
Alignment:
Q  77 aaacaccc-tgaggacaacacccaccaaatacacgtcaccacctaaaacaaactcttc-acaaaaacgaccactgtaaaaacgatatccatcacaacccg 174  Q
    |||||||| |||||||||||||  | ||||||| ||||||||||||||   | || || ||  ||| ||||||||||||||||| ||||  |||| || |    
T  7391745 aaacacccatgaggacaacaccatcaaaatacatgtcaccacctaaaattgattcctccacggaaaagaccactgtaaaaacgaaatcccgcacagcctg 7391844  T
Q  175 tcatcactactcacccccaaagaaaatacacccctcaaaa 214  Q
    || |||||||||||||||||||||   |||||||||||||    
T  7391845 tcgtcactactcacccccaaagaa---acacccctcaaaa 7391881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 342
Target Start/End: Original strand, 7391916 - 7392048
Alignment:
Q  210 caaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctga-aagatcgttcatcttccaccacctcttgaccttcgat 308  Q
    ||||||||| || ||| |||  ||||| ||||  |||||||||||||||||||| ||||  | ||||||  ||  |||| ||||||||| ||||| ||||    
T  7391916 caaaaataatctcccattctccaacacgaaagcagagccacatccgaaaagctcctatccaataagatcaatccgcttcaaccacctctcgacctccgat 7392015  T
Q  309 ccaccgaaagaaactataaaaagcacaaaaccaa 342  Q
    |||||||||||||| || |||||| |||||||||    
T  7392016 ccaccgaaagaaaccat-aaaagcccaaaaccaa 7392048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 31742552 - 31742504
Alignment:
Q  35 tacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  31742552 tacaaacaaaaggcgccgtatataggcggaacacccgaaaacaaacacc 31742504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 7195059 - 7195114
Alignment:
Q  88 ggacaacacccaccaaa-tacacgtcaccacctaaaacaaact-cttcacaaaaac 141  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  7195059 ggacaacacccaccaaaatacacgtcaccacctaaaacagactccttcacaaaaac 7195114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 8731331 - 8731278
Alignment:
Q  30 gagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    ||||||||||||||||||||| |||||||| || ||||||  ||||||||||||    
T  8731331 gagaatacaaacaaaaggcgccgtatatagacgaaacacccaaaaataaacacc 8731278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 18313413 - 18313505
Alignment:
Q  95 acccaccaaatacacgtcaccacctaaaacaaactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcaccc 190  Q
    |||||||||| |||| ||||||||||||||| ||||  || |||||| | ||| ||||| |||||||||||||| || | || |||||||||||||    
T  18313413 acccaccaaa-acacatcaccacctaaaacagactc--caaaaaaacaaacaccgtaaacacgatatccatcaccactcatcgtcactactcaccc 18313505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 24071952 - 24072000
Alignment:
Q  33 aatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaaca 81  Q
    ||||||||| || ||||| |||||||||||||||||| |||||||||||    
T  24071952 aatacaaactaagggcgccgtatataggcggaacacccgaaaataaaca 24072000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 27713481 - 27713421
Alignment:
Q  15 gagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaa 75  Q
    |||||| |||||| |||| |||||||| ||||||||  ||||||||||||||||| |||||    
T  27713481 gagaccagtgaaactgaggatacaaacgaaaggcgccatatataggcggaacacccgaaaa 27713421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 23426716 - 23426646
Alignment:
Q  7 gaggagcagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaata 77  Q
    ||||| |||||||||||||    ||||||||||  |||||| || |||||||||||||||||| |||||||    
T  23426716 gaggaacagagaccggtgattcagagaatacaactaaaaggtgccgtatataggcggaacacccgaaaata 23426646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 30097654 - 30097612
Alignment:
Q  89 gacaacacccaccaaa-tacacgtcaccacctaaaacaaactc 130  Q
    |||||||||||||||| ||||||||||||||||||||| ||||    
T  30097654 gacaacacccaccaaaatacacgtcaccacctaaaacagactc 30097612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 14120779 - 14120864
Alignment:
Q  116 acctaaaacaaactctt-cacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaa 200  Q
    ||||||||||||||| | ||| ||||||| || | |||||||||||| || ||| ||||||| |||||| ||||| ||||| ||||    
T  14120779 acctaaaacaaactcctacacgaaaacgatcattataaaaacgatattcaacaccacccgtcgtcactattcacctccaaaaaaaa 14120864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 18593544 - 18593454
Alignment:
Q  106 acacgtcaccacctaaaacaaactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaa 198  Q
    |||| ||||||||||| ||||||||  || |||||| | ||||||||| ||| |||||| |||  ||| || ||||||||||||| |||||||    
T  18593544 acacatcaccacctaacacaaactc--caaaaaaacaagcactgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaagaa 18593454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 381
Target Start/End: Original strand, 22675322 - 22675375
Alignment:
Q  328 aaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||||| ||||||||||||| | ||||  |||||||||||||||||||| |||||    
T  22675322 aaagcccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 22675375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 6e-53; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 29 - 374
Target Start/End: Complemental strand, 34775266 - 34774907
Alignment:
Q  29 tgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-------------gaggacaacacccaccaaa-tacacgtcac 114  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||||||||||| |             ||||||||||||||||||| |||||||||     
T  34775266 tgagaatacaaactaaaggcgccgtatataggcggaacacccgaaaataaacaccttaaaaaataccaatgaggacaacacccaccaaaatacacgtcat 34775167  T
Q  115 cacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaa 213  Q
    ||||||||||| |||| ||||| |||||||| ||||||||||||| ||||  ||| ||||||| |||||||||| |||||| |||   |||||| | |||    
T  34775166 cacctaaaacagactccttcacgaaaacgacaactgtaaaaacgaaatcccacactacccgtcgtcactactca-ccccaatgaa---acacccgtaaaa 34775071  T
Q  214 aataaacttccagtcttaaacaccaaagttgagccacatcc-gaaaagctcatatctgaaa-gatcgttcatcttccaccacctcttgaccttcgatcca 311  Q
    |||||||| ||| || | |||||||||| |||||||||||| ||||| ||| |||||||||  |||  ||| ||||||||||||||  |||| | || ||    
T  34775070 aataaactcccaatcctcaacaccaaagctgagccacatccggaaaaactcctatctgaaacaatcaatcagcttccaccacctctcaacctccaattca 34774971  T
Q  312 ccgaaagaaactataaaaagcacaaaaccaaacttaatcc-aacaaactgactcccgatctcga 374  Q
    ||||||||||| ||||||||| |||||| |||||| | || || ||||||||||||||||||||    
T  34774970 ccgaaagaaaccataaaaagcccaaaactaaacttgagccaaaaaaactgactcccgatctcga 34774907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 27102589 - 27102221
Alignment:
Q  16 agaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-----------gaggacaacacccaccaaa 104  Q
    |||| ||||||  ||||||||||||||||||| || |||||||||||||||||| |||||||||||||||           |||||||||||||||||||    
T  27102589 agactggtgaacctgagaatacaaacaaaaggtgccgtatataggcggaacacccgaaaataaacaccctaaaaacaccatgaggacaacacccaccaaa 27102490  T
Q  105 tacacgtcaccacctaaaacaaactctt-cacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatac 203  Q
            | | ||||||||| |  ||| ||| |||||  ||||||||||||||| ||||| ||| || | || |||||||||||||| |||||||| |     
T  27102489 --------atcccctaaaacagatactttcacgaaaacagccactgtaaaaacgaaatccaacaccactcatcgtcactactcacccc-aaagaaaaaat 27102399  T
Q  204 acccctcaaaaata-aacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgacc 302  Q
    |||||||||||||  || | ||| || | ||||| |||| ||||||||| | |||| |||| ||||||||||||| |||| |||||||||||||| ||||    
T  27102398 acccctcaaaaatccaaatcccattcctgaacactaaagctgagccacaac-gaaacgctcctatctgaaagatcattcagcttccaccacctctcgacc 27102300  T
Q  303 ttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    | ||||||||||||||||||  |||||||| ||||||||||||| ||||||  |||||||||||||||||||| |||||    
T  27102299 tccgatccaccgaaagaaaccgtaaaaagcccaaaaccaaacttgatccaaagaactgactcccgatctcgaatcaaaa 27102221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 82 - 342
Target Start/End: Original strand, 31290773 - 31291031
Alignment:
Q  82 ccctgaggacaacacccaccaaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatca 180  Q
    ||||||||||||  |||  || |||||| |||||||||||| || |||| ||| | ||||||||||||||||||| |||| |||  || | || || |||    
T  31290773 ccctgaggacaattcccttcatatacacatcaccacctaaatcagactccttcgcgaaaacgaccactgtaaaaatgatagcca--accatccatcgtca 31290870  T
Q  181 ctactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgtt 280  Q
    |||||||||| ||||||||| |||||||| ||||||||||  |   |||  |||||||||| ||||||||||||||||||||| |||| ||||||||       
T  31290871 ctactcaccctcaaagaaaa-acacccctaaaaaataaacggctcatctagaacaccaaagctgagccacatccgaaaagctcctatccgaaagatcaag 31290969  T
Q  281 catcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaa 342  Q
    || |||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||    
T  31290970 caacttccaccacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaa 31291031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 232 - 381
Target Start/End: Original strand, 6583118 - 6583267
Alignment:
Q  232 aacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaag 331  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||  ||| |||||||||||||| ||||| |||| ||||||||||||| ||||||||    
T  6583118 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcagcttccaccacctctcgacctccgattcaccgaaagaaaccataaaaag 6583217  T
Q  332 cacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    || |||||||||  | ||||||  || ||||| ||||||||||| |||||    
T  6583218 caaaaaaccaaaactgatccaaagaattgactgccgatctcgaatcaaaa 6583267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 77 - 381
Target Start/End: Original strand, 10785208 - 10785510
Alignment:
Q  77 aaacaccct-gaggacaacacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaaccc 173  Q
    ||||||||| |||||||||||||| |||| |||| || | ||| ||||||| |||| ||||| ||||||||  ||| ||||||||||||||  || ||||    
T  10785208 aaacacccttgaggacaacacccatcaaaatacatgttatcacttaaaacagactccttcacgaaaacgacatctgaaaaaacgatatcca--accaccc 10785305  T
Q  174 gtcatcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctga-a 272  Q
     || |||||||||| |||  ||||||   |||||||||||||||||||  ||||| |  | |||||||  ||||| || ||||||||||| |||| || |    
T  10785306 atcgtcactactcatcccgcaagaaa---cacccctcaaaaataaactctcagtcctcgataccaaagcagagccgcacccgaaaagctcctatcagaga 10785402  T
Q  273 agatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctc 372  Q
    | ||| |||| |||||||||||||  ||||| ||| ||||||||| || | ||||||||| ||||||||||||| | ||||  |||||||||||||||||    
T  10785403 aaatcattcagcttccaccacctcgcgacctccgaaccaccgaaaaaatc-ataaaaagcccaaaaccaaacttgagccaaacaactgactcccgatctc 10785501  T
Q  373 gaaacaaaa 381  Q
    ||| |||||    
T  10785502 gaagcaaaa 10785510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 9313108 - 9313309
Alignment:
Q  130 cttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtct 229  Q
    |||||||||| | |||| ||| |||||||||||||  || || | || || ||| |||||||||||  ||| |||||| |||||| |||||| ||||||     
T  9313108 cttcacaaaagcaaccattgttaaaacgatatccaataccactcatcgtcgctaatcacccccaaaagaaaaacacccttcaaaattaaactcccagtcc 9313207  T
Q  230 taaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaa 329  Q
    | || ||||||| ||||||||||||||||| ||| ||| |||| |||| | || || ||||||||| |  |||| |||||||||||||||||| ||||||    
T  9313208 tgaa-accaaagctgagccacatccgaaaaactcgtatttgaaggatcatacaactgccaccacctatccacctccgatccaccgaaagaaaccataaaa 9313306  T
Q  330 agc 332  Q
    |||    
T  9313307 agc 9313309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 91 - 320
Target Start/End: Complemental strand, 16577579 - 16577352
Alignment:
Q  91 caacacccaccaaa-tacacgtcaccacctaaaacaaactctt-cacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcac 188  Q
    |||||||||||||| || || ||| ||||||||||| |||||| ||| ||||||||||||  ||||| ||||||||| || |  | || || ||||||||    
T  16577579 caacacccaccaaaataaacatcatcacctaaaacagactctttcacgaaaacgaccactcaaaaaatgatatccataaccattcatcgtccctactcac 16577480  T
Q  189 ccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttcc 288  Q
     || ||||||    |||||||| |||| |||||| |||||   | |||||||||||||||||||||||||||||| |||   ||||||| |||| |||||    
T  16577479 tccaaaagaa----cacccctctaaaagaaactttcagtcaccatcaccaaagttgagccacatccgaaaagctcctattccaaagatcattcagcttcc 16577384  T
Q  289 accacctcttgaccttcgatccaccgaaagaa 320  Q
    |||||||||  |||| | ||| ||||||||||    
T  16577383 accacctctcaacctccaatctaccgaaagaa 16577352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 4431084 - 4430881
Alignment:
Q  14 agagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggc-ggaacacctgaaaataaacaccctgaggacaacacccaccaaatacacgtc 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||| ||||||||    | |||||||    | ||||||||    
T  4431084 agagaccggtgaaattgagaatacaaacaaaaggcgccgtataaaggcgggaacacctaaaaat-aacaccct---aaaaacaccc-ttgagtacacgtc 4430990  T
Q  113 accacctaaaacaaact-cttcac-aaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctc 210  Q
    |||||||| |||||||| |||| | |||||| ||||| ||||||||||||||||  || | ||||| || ||||||| |||||||||||| |||||||||    
T  4430989 accacctagaacaaactccttcgcaaaaaacaaccaccgtaaaaacgatatccaaaaccatccgtcgtcgctactca-ccccaaagaaaa-acacccctc 4430892  T
Q  211 aaaaataaact 221  Q
     ||| ||||||    
T  4430891 caaattaaact 4430881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 321
Target Start/End: Complemental strand, 16147736 - 16147648
Alignment:
Q  233 acaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaa 321  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||  |||| ||||| |||||||||||    
T  16147736 acaccaaagctgagccacatccgaaaagctcatatctgaaagatcattcaactttcaccacctctccacctccgatctaccgaaagaaa 16147648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 321
Target Start/End: Complemental strand, 32882757 - 32882463
Alignment:
Q  33 aatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-------------gaggacaacacccaccaaa-tacacgtcaccacc 118  Q
    ||||||||| |||||||| |||||||||| ||||||| |||||||||||||||             ||||||||||||||||||| || || ||||| ||    
T  32882757 aatacaaactaaaggcgccgtatataggcagaacacccgaaaataaacaccctaaaagacacccccgaggacaacacccaccaaaatatacatcaccgcc 32882658  T
Q  119 taaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatacacccctcaaaaata 217  Q
    ||||||  |||| ||||| ||||||| ||||||||| |||||||||| ||| |||| || ||||||||||||||| ||  |   |||||||||||||       
T  32882657 taaaactgactccttcacgaaaacgagcactgtaaacacgatatccaacaccacccatcgtcactactcaccccccaacga---acacccctcaaaa--- 32882564  T
Q  218 aacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaa 317  Q
         |||||| | |||||||||| |||||||||| |||||||||| |  | |||||||| || | ||| |||||||| | || || |||| ||||||||    
T  32882563 ---ccccagtcctcaacaccaaagctgagccacattcgaaaagctcctgaccgaaagatcattaagctttcaccacctgtcgatctccgattcaccgaaa 32882467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 228
Target Start/End: Original strand, 11439698 - 11439919
Alignment:
Q  20 cggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-----------gaggacaacacccaccaaa-tac 107  Q
    |||||||| |||||||||||||||||||||   ||||||| ||||||| | |||||||||||||||           || ||||||| |||||||| |||    
T  11439698 cggtgaaaatgagaatacaaacaaaaggcgacatatatagacggaacatccgaaaataaacaccctaaaatccccctgaagacaacatccaccaaaatac 11439797  T
Q  108 acgtcaccacctaaaaca-aactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactact-cacccccaaagaaaatacac 205  Q
    |||||||||||||||||| | | |||||| ||| | ||||| ||||||| |||||||| ||| ||   || |||||||| ||||||||||||||| ||||    
T  11439798 acgtcaccacctaaaacagatcccttcacgaaagcaaccaccgtaaaaatgatatccaacaccacttatcgtcactactccacccccaaagaaaa-acac 11439896  T
Q  206 ccctcaaaaataaacttccagtc 228  Q
    |||||| || |||||| ||||||    
T  11439897 ccctcagaattaaactcccagtc 11439919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 46768579 - 46768343
Alignment:
Q  21 ggtgaaattgagaatacaaacaaaaggcgca-gtatataggcggaacacctgaaaataaacaccct-------------gaggacaacacccacc-aaat 105  Q
    |||||||||||| |||||||||||||||||  |||| ||||||||||||| |||||||||||||||             |||||||||||||||| ||||    
T  46768579 ggtgaaattgagcatacaaacaaaaggcgcccgtatgtaggcggaacacccgaaaataaacaccctaaaaaacacccccgaggacaacacccaccaaaat 46768480  T
Q  106 acacgtcaccacctaaaacaaact-cttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaataca 204  Q
     ||||||||||||||||||| ||| |||||| |||||||||||        ||||||||| |||  ||| || ||||||||||||||||||||||| | |    
T  46768479 tcacgtcaccacctaaaacagactccttcacgaaaacgaccac--------cgatatccaacactgcccatcgtcactactcacccccaaagaaaa-aaa 46768389  T
Q  205 cccctcaaaaataaacttccagtcttaaacaccaaagttgagccac 250  Q
     ||||||| | |||||| ||| || | |||||||||| | ||||||    
T  46768388 accctcaagactaaactcccaatcctgaacaccaaagctaagccac 46768343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 9313011 - 9313083
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    ||||||||||||||| | | ||||||| |||||||||  |||||||||||||||||| |||||||||||||||    
T  9313011 cagagaccggtgaaacttataatacaatcaaaaggcgtcgtatataggcggaacacccgaaaataaacaccct 9313083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 52278509 - 52278438
Alignment:
Q  206 ccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatc 277  Q
    ||||||||| |||||| |||||| | |||| ||||||||||||||||||||||| ||| |||||||||||||    
T  52278509 ccctcaaaattaaactcccagtcctcaacatcaaagttgagccacatccgaaaaactcctatctgaaagatc 52278438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 376477 - 376549
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    ||||||| | |||||  |||||||||||  |||||||| |||||||||| |||||||||||||||||||||||    
T  376477 cagagacggatgaaacagagaatacaaagtaaaggcgccgtatataggcagaacacctgaaaataaacaccct 376549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 41126247 - 41126353
Alignment:
Q  86 gaggacaacacccaccaaatacacgtcaccacctaaaacaaactc-ttcacaaaaacga-ccactgtaaaaacgatatccatcacaacccgtcatcacta 183  Q
    |||||||||||| || |||||||  ||||||||||||||| || | ||||| ||||| | ||||||||||| ||||||||||||| |||| || ||||||    
T  41126247 gaggacaacacctacaaaatacatatcaccacctaaaacagacgcattcacgaaaacaaaccactgtaaaa-cgatatccatcaccacccatcgtcacta 41126345  T
Q  184 ctcacccc 191  Q
    ||||||||    
T  41126346 ctcacccc 41126353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 41126379 - 41126462
Alignment:
Q  234 caccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaa 317  Q
    |||||||||||| ||||||| ||||||||| ||||  |||||||||||| |||||| |||||||  |||| | |||||||||||    
T  41126379 caccaaagttgatccacatctgaaaagctcctatccaaaagatcgttcagcttccagcacctctcaacctccaatccaccgaaa 41126462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 32863225 - 32863287
Alignment:
Q  21 ggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    ||||||| ||||||||||||| ||| | |  ||||||||||||||||||||||||||||||||    
T  32863225 ggtgaaaatgagaatacaaactaaatgtgtcgtatataggcggaacacctgaaaataaacacc 32863287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 195
Target Start/End: Complemental strand, 52278661 - 52278502
Alignment:
Q  44 aaggcgcagtatataggcggaacacctgaaaataaacaccct-----------gaggacaacacccaccaaatacacgtcaccacctaaaacaaactctt 132  Q
    |||||||  ||||||||||||||||||||||||||||||| |           ||||||||||||||||||| ||||| ||||||||  |||||   ||     
T  52278661 aaggcgccatatataggcggaacacctgaaaataaacaccttaaagacaccacgaggacaacacccaccaaa-acacgccaccacctcgaacaacgccta 52278563  T
Q  133 cacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaa 195  Q
    ||| |||||||||||  ||||| |||||||||  || | ||||||||||||||||||| ||||    
T  52278562 cacgaaaacgaccaccataaaagcgatatcca--accatccgtcatcactactcaccctcaaa 52278502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 32863303 - 32863381
Alignment:
Q  86 gaggacaacacccaccaa-atacacgtcaccacctaaaaca-aactcttcacaaaaacgaccactgtaaaaacgatatc 162  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||  || ||| |||||||||| |||||| ||||||||    
T  32863303 gaggacaacacccaccaacatacacgtcaccgcctaaaacagaatcctccacgaaaacgaccattgtaaacacgatatc 32863381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 50588964 - 50589014
Alignment:
Q  34 atacaaacaaaaggcgcagtatataggcggaacacctgaa-aataaacacc 83  Q
    |||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  50588964 atacaaacgaaaggcgccgtatataggcggaacacctgaagaataaacacc 50589014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 195
Target Start/End: Original strand, 24684261 - 24684358
Alignment:
Q  95 acccaccaaatacacgtcaccacctaaaacaaactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaa 194  Q
    |||||||||| |||| ||||||||||||||||||||  || |||||| | | ||||||| |||||||||| |||  ||| || |||||||||| ||||||    
T  24684261 acccaccaaa-acacatcaccacctaaaacaaactc--caaaaaaacaaactctgtaaacacgatatccaccaccgcccatcgtcactactcaaccccaa 24684357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 46692599 - 46692689
Alignment:
Q  106 acacgtcaccacctaaaacaaactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaa 198  Q
    |||| ||||||||||||||||||||  || |||||| | ||||||||| |||||||| | |||  ||| || ||||||||||||| |||||||    
T  46692599 acacatcaccacctaaaacaaactc--caaaaaaacaagcactgtaaacacgatatcaaccaccgcccatcgtcactactcacccacaaagaa 46692689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 16149082 - 16148987
Alignment:
Q  102 aaatacacgtcaccacctaaaacaaac-tcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaaga 197  Q
    |||||||||||||||||||||||| ||  |||||   ||||||| |||| ||||||||||||||  |  |||| || ||||||||||||||||||||    
T  16149082 aaatacacgtcaccacctaaaacagacaccttcatgtaaacgactactg-aaaaacgatatccaaaagcacccatcgtcactactcacccccaaaga 16148987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 19599042 - 19598990
Alignment:
Q  32 gaatacaaacaaaaggcgcagtatataggcggaacacctgaaaa-taaacacc 83  Q
    ||||||||  ||||||||| |||||||||||||||||||||||| ||||||||    
T  19599042 gaatacaataaaaaggcgccgtatataggcggaacacctgaaaagtaaacacc 19598990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 42374573 - 42374526
Alignment:
Q  34 atacaaacaaaaggcgcagtatataggcggaacacctgaaaataaaca 81  Q
    ||||||||||| |||||  ||||||||||||||||| |||||||||||    
T  42374573 atacaaacaaagggcgccatatataggcggaacacccgaaaataaaca 42374526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 31290692 - 31290762
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacacc 83  Q
    ||||||| ||||| | ||||||||||||||| |||| |  ||| ||| ||||||||| |||||||||||||    
T  31290692 cagagactggtgagactgagaatacaaacaagaggcactatatgtagacggaacacccgaaaataaacacc 31290762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 375
Target Start/End: Original strand, 32864512 - 32864606
Alignment:
Q  281 catcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaa 375  Q
    |||| |||||||||||  |||||  |||||||  |||||||| ||||||||| ||||||||||||| |  |||  ||| |||| |||||||||||    
T  32864512 catcatccaccacctcccgacctctgatccacaaaaagaaaccataaaaagcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaa 32864606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 46603751 - 46603705
Alignment:
Q  33 aatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaa 79  Q
    |||||||||||||| ||  |||||||||||||||||| |||||||||    
T  46603751 aatacaaacaaaagacgttgtatataggcggaacacccgaaaataaa 46603705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 16149155 - 16149114
Alignment:
Q  44 aaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    ||||||| |||||||||||||||||  |||||||||||||||    
T  16149155 aaggcgccgtatataggcggaacacgcgaaaataaacaccct 16149114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 17033984 - 17033939
Alignment:
Q  33 aatacaaacaaaaggcgcagtatataggcggaacacctgaaaataa 78  Q
    |||||||||||||||||  ||||||| |||||||||| ||||||||    
T  17033984 aatacaaacaaaaggcgtcgtatataagcggaacacccgaaaataa 17033939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 27031710 - 27031827
Alignment:
Q  202 acacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgac 301  Q
    |||||||||||||  ||||| |||| ||| |||| | ||  |||||||||| |||||||||| || | ||| || | | || ||||||| ||||||  ||    
T  27031710 acacccctcaaaataaaactcccagacttcaacatccaaactgagccacattcgaaaagctcttaaccgaatgaacatgcagcttccacaacctctcaac 27031809  T
Q  302 cttcgatccaccgaaaga 319  Q
    || |||||||||||||||    
T  27031810 ctccgatccaccgaaaga 27031827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 38544678 - 38544789
Alignment:
Q  271 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccga 368  Q
    |||||||  |||||||||||||| |||| | || |||| || ||| |||| |||| ||||| | |||||||||| ||||| ||||  |||||||||||||    
T  38544678 aaagatcaatcatcttccaccacttcttaatctccgattcatcgagagaacacta-aaaaacctcaaaaccaaaacttaaaccaaagaactgactcccga 38544776  T
Q  369 tctcgaaacaaaa 381  Q
    ||||||| |||||    
T  38544777 tctcgaatcaaaa 38544789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 105 - 381
Target Start/End: Complemental strand, 58433 - 58157
Alignment:
Q  105 tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaatac 203  Q
    ||||| |||||||| |||||| |||| ||||| |||||||||| |||||||  |||||||| ||| ||||||| ||||||||||| ||||||||| | ||    
T  58433 tacacatcaccaccaaaaacagactccttcacgaaaacgaccattgtaaaactgatatccaacactacccgtcgtcactactcacacccaaagaaca-ac 58335  T
Q  204 acccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgacct 303  Q
    || |||||||| ||||||  |||||   |||||||||| |||||||||| |||||||||| |||| |||||||  |||| |||||| || |||| |||||    
T  58334 actcctcaaaattaaactctcagtcccgaacaccaaagctgagccacattcgaaaagctcttatccgaaagataattcagcttccatcatctctcgacct 58235  T
Q  304 tcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
     |||||||||||||||||| |||||||||  |||||||||||| ||||||  || ||||| ||||||| ||| |||||    
T  58234 ccgatccaccgaaagaaaccataaaaagcctaaaaccaaacttgatccaaacaattgacttccgatcttgaatcaaaa 58157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 58537 - 58466
Alignment:
Q  14 agagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    ||||||||||||||  || |||| ||||||||||||| |||||||||  |||||||  |||||||| |||||    
T  58537 agagaccggtgaaacagataatagaaacaaaaggcgccgtatataggtagaacacccaaaaataaataccct 58466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 381
Target Start/End: Complemental strand, 37117 - 36737
Alignment:
Q  13 cagagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct-------------gaggacaacaccca 99  Q
    ||||||||||||||| ||| |||||||||||||| ||| |||||||||||||||| | ||||||||||||| |             |||||| |||||||    
T  37117 cagagaccggtgaaactgataatacaaacaaaagacgctgtatataggcggaacatccgaaaataaacaccataaaaaacacccatgaggaccacaccca 37018  T
Q  100 ccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaaga 197  Q
     |||| ||||||||||||||||||||| |||| ||||| ||| | |||||||||||||||| |||||  || | ||  | ||||||||||||||||||||    
T  37017 acaaaatacacgtcaccacctaaaacagactccttcacgaaacc-accactgtaaaaacgacatcca--accatccaccgtcactactcacccccaaaga 36921  T
Q  198 aaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctct 297  Q
    ||| |||||||| |||||||| |  || ||| | |||||||||| |||||||||  |||||||||| || | |||||| | |||| |||||||||| |||    
T  36920 aaa-acacccctaaaaaataacccccc-gtcctgaacaccaaagctgagccacaatcgaaaagctcctaaccgaaagaccattcaacttccaccacatct 36823  T
Q  298 tgaccttcgatccaccgaaagaaactataaaaagcacaaaacc--aaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
     ||||| |||||||||||||||||  ||||||||  |||||||  ||| || |  |||  |||||||||||||||||||| |||||    
T  36822 cgacctccgatccaccgaaagaaatcataaaaagaccaaaaccaaaaagttgagacaaagaactgactcccgatctcgaatcaaaa 36737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 381
Target Start/End: Original strand, 17656874 - 17657053
Alignment:
Q  202 acacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctcttgac 301  Q
    ||||||||||||| |||||| ||| || | ||||||||||||||||||| || ||||||||| ||| ||||||||| |||| |||||||||||| | |||    
T  17656874 acacccctcaaaattaaactcccaatcatgaacaccaaagttgagccacctctgaaaagctcctatatgaaagatcattcagcttccaccacctatcgac 17656973  T
Q  302 cttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    || |||||||||||||||||| ||||||||  ||||||||||||| | ||||  |||||||||||||||||||| |||||    
T  17656974 ctccgatccaccgaaagaaaccataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 17657053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 77 - 381
Target Start/End: Original strand, 10248313 - 10248604
Alignment:
Q  77 aaacaccct-gaggacaacacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaaccc 173  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||  ||  ||||    
T  10248313 aaacacccttgaggacaacacccgccaaaatacacgtcaccacctaaaacaaactccttcacgaaaacgaccactgtaaaaacgacatcccacaacaccc 10248412  T
Q  174 gtcatcactactcacccccaaagaaaatacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaa 273  Q
     || ||||||||||||||| ||  ||  |||||| |||||| ||||||   |||| | |||||||||||||||||||||||||              |||    
T  10248413 atcgtcactactcaccccccaacgaa--acacccgtcaaaattaaactctaagtcctcaacaccaaagttgagccacatccga--------------aaa 10248496  T
Q  274 gatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcg 373  Q
    ||||  ||| |||||||||||||  | ||| ||||||||| |||||||| ||| |||||| |||||||||||| | ||||  |||||||||||||||| |    
T  10248497 gatcaatcagcttccaccacctcgcggcctccgatccaccaaaagaaaccatataaagcaaaaaaccaaacttgagccaaagaactgactcccgatcttg 10248596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 197
Target Start/End: Original strand, 17656408 - 17656606
Alignment:
Q  14 agagaccggtgaaattgagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct------------gaggacaacacccacc 101  Q
    ||||||||||||||||||  ||| ||||||||||||  |||||||| ||||||||| |||||| ||||||||            ||||||||||||||||    
T  17656408 agagaccggtgaaattgaacatataaacaaaaggcgtcgtatatagacggaacacccgaaaattaacaccctaaaaacacccttgaggacaacacccacc 17656507  T
Q  102 aaa-tacacgtcaccacctaaaacaaactc-ttcac-aaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaaga 197  Q
    ||| | |||||||||| |||||||| |||| ||||  |||||||||||||| |||||||||||||| |||  | | |  ||||||||||||||||||||    
T  17656508 aaaattcacgtcaccatctaaaacagactccttcaagaaaaacgaccactgcaaaaacgatatccaacaccgctcattgtcactactcacccccaaaga 17656606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 366
Target Start/End: Original strand, 12197848 - 12198105
Alignment:
Q  102 aaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaa 200  Q
    ||||||||||||||||||| |||| || | ||||  || |||||||||  |||||||||||||| ||| ||||||| |||||||||||||||||||||      
T  12197848 aaatacacgtcaccacctacaacagacgccttcatgaacacgaccactaaaaaaacgatatccagcaccacccgtcgtcactactcacccccaaagaa-- 12197945  T
Q  201 tacacccctcaaaaataaacttccagtcttaaacaccaaagttga---gccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctct 297  Q
              |||| |||||| ||||   | ||||| |||| |||   | ||||||||||||||||||||| |||||||| || | |||||| |||||||    
T  12197946 ----------aaaattaaactcccagaactcaacactaaagatgaggcggcacatccgaaaagctcatatccgaaagatcattgaacttccatcacctct 12198035  T
Q  298 tgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaacaaactgactccc 366  Q
     ||||| |||||||  ||||||| |  | ||||||| ||||||||||||| | ||||  |||||||||||    
T  12198036 cgacctccgatccattgaaagaacatcaaaaaaagctcaaaaccaaacttgagccaaagaactgactccc 12198105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 366
Target Start/End: Original strand, 12442276 - 12442533
Alignment:
Q  102 aaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaa 200  Q
    ||||||||||||||||||| |||| || | ||||  || |||||||||  |||||||||||||| ||| ||||||| |||||||||||||||||||||      
T  12442276 aaatacacgtcaccacctacaacagacgccttcatgaacacgaccactaaaaaaacgatatccagcaccacccgtcgtcactactcacccccaaagaa-- 12442373  T
Q  201 tacacccctcaaaaataaacttccagtcttaaacaccaaagttga---gccacatccgaaaagctcatatctgaaagatcgttcatcttccaccacctct 297  Q
              |||| |||||| ||||   | ||||| |||| |||   | ||||||||||||||||||||| |||||||| || | |||||| |||||||    
T  12442374 ----------aaaattaaactcccagaactcaacactaaagatgaggcggcacatccgaaaagctcatatccgaaagatcattgaacttccatcacctct 12442463  T
Q  298 tgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaacaaactgactccc 366  Q
     ||||| |||||||  ||||||| |  | ||||||| ||||||||||||| | ||||  |||||||||||    
T  12442464 cgacctccgatccattgaaagaacatcaaaaaaagctcaaaaccaaacttgagccaaagaactgactccc 12442533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 43312399 - 43312511
Alignment:
Q  90 acaacacccaccaaa-tacacgtcaccacctaaaacaaactctt-cacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactca 187  Q
    |||||||||| |||| |||| ||||||||||||| || |||| | |||||||||||||||||||||||||||||||  ||| |  | || |||||||||     
T  43312399 acaacacccatcaaaatacatgtcaccacctaaatcagactcctacacaaaaacgaccactgtaaaaacgatatcccacaccatacatcgtcactactcg 43312498  T
Q  188 cccccaaagaaaa 200  Q
    ||||||| |||||    
T  43312499 cccccaacgaaaa 43312511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 380
Target Start/End: Complemental strand, 15906818 - 15906717
Alignment:
Q  280 tcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaa-agcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaaca 378  Q
    ||||||||||||||||||| ||||  | ||||| |||||||||  ||||  ||| ||||||||||||| | ||||  |||||||||||||||||||| ||    
T  15906818 tcatcttccaccacctcttaacctctggtccactgaaagaaacactaaatcagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatca 15906719  T
Q  379 aa 380  Q
    ||    
T  15906718 aa 15906717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 8862380 - 8862496
Alignment:
Q  87 aggacaacacccaccaaa-tacacgtcaccacctaaaacaaactctt-cacaaaaacgaccactgtaaaaacgatatcc-atcacaacccgtcatcacta 183  Q
    |||||||||||||| ||| ||||||||||||||||||||  |||||| ||| | ||| |||| ||||||||| |||||| | ||| || |||| ||||||    
T  8862380 aggacaacacccacaaaaatacacgtcaccacctaaaactgactcttacacgagaacaaccattgtaaaaacaatatccaaacaccacacgtcgtcacta 8862479  T
Q  184 ctcacccccaaagaaaa 200  Q
    || || |||||||||||    
T  8862480 ctgactcccaaagaaaa 8862496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 8862505 - 8862563
Alignment:
Q  234 caccaaagttgagccacatccgaaaagctcatatctgaaagatcgttcatcttccacca 292  Q
    |||||||| ||||||||||| |||||| ||||||| |||||||| |||| |||||||||    
T  8862505 caccaaagctgagccacatctgaaaagttcatatccgaaagatcattcagcttccacca 8862563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 12197763 - 12197818
Alignment:
Q  30 gagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    |||||||||||| |||||||  || ||||||||||||||  |||||||||||||||    
T  12197763 gagaatacaaactaaaggcgtcgtctataggcggaacacgggaaaataaacaccct 12197818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 12442191 - 12442246
Alignment:
Q  30 gagaatacaaacaaaaggcgcagtatataggcggaacacctgaaaataaacaccct 85  Q
    |||||||||||| |||||||  || ||||||||||||||  |||||||||||||||    
T  12442191 gagaatacaaactaaaggcgtcgtctataggcggaacacgggaaaataaacaccct 12442246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 30236124 - 30236179
Alignment:
Q  326 aaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    ||||||| ||||||||||||| | ||||  |||||||||||||||||||| |||||    
T  30236124 aaaaagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaa 30236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 36631135 - 36631038
Alignment:
Q  95 acccaccaaatacacgtcaccacctaaaacaaactcttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaa 194  Q
    |||||||||| |||| ||||||||||||||| ||||  || |||||| | ||||||||| ||| |||||| |||  ||| || | |||||||||||||||    
T  36631135 acccaccaaa-acacatcaccacctaaaacagactc--caaaaaaacaaacactgtaaacacggtatccaccaccgcccatcgtaactactcacccccaa 36631039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 22325859 - 22325931
Alignment:
Q  93 acacccaccaaa-tacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatcc 163  Q
    |||||||||||| || | |||||||  ||||||| |||| || ||||||||||||| ||||||||||||||||    
T  22325859 acacccaccaaaatataggtcaccatataaaacagactccttaacaaaaacgaccattgtaaaaacgatatcc 22325931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 102 - 381
Target Start/End: Complemental strand, 19686 - 19413
Alignment:
Q  102 aaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaa 200  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||| || |||||||||||||||  || || | || ||||||||| ||||  ||||||     
T  19686 aaatacacatcaccacctaaaacaaactccttctcaaaaacgacctctataaaaacgatatcca--accacacatcgtcactactcgcccc--aagaaat 19591  T
Q  201 tacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaa-gatcgttcatcttccaccacctcttg 299  Q
       |||| ||||||||||||||| | || | ||||||||||  ||||||||| |||||||||| | || |||| |||  |||| ||||||||| |||| |    
T  19590 ---acccttcaaaaataaacttcaa-tcctcaacaccaaagcagagccacattcgaaaagctcctgtccgaaaagattattcagcttccaccaactctcg 19495  T
Q  300 accttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| ||||||||||| |||||    
T  19494 acctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaa 19413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 381
Target Start/End: Original strand, 41916 - 42189
Alignment:
Q  102 aaatacacgtcaccacctaaaacaaactc-ttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaagaaaa 200  Q
    |||||||| ||||||||||||||||| || ||| |  |||||||| || |||||||||||||||  || |||| || ||||||||| ||||  ||||||     
T  41916 aaatacacatcaccacctaaaacaaattccttctcggaaacgacctctataaaaacgatatcca--accacccatcgtcactactcgcccc--aagaaat 42011  T
Q  201 tacacccctcaaaaataaacttccagtcttaaacaccaaagttgagccacatccgaaaagctcatatctgaaa-gatcgttcatcttccaccacctcttg 299  Q
       |||| | ||||||||||||| | || | ||||||||||  ||||||||| |||||||||| |||| |||| |||  |||| ||||||||| |||| |    
T  42012 ---accctttaaaaataaacttcaa-tcctcaacaccaaagcagagccacattcgaaaagctcctatccgaaaagattattcagcttccaccaactctcg 42107  T
Q  300 accttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 381  Q
    |||| |||||||| ||||||||| ||||||| | ||||||||||||| | ||||  |||||||| ||||||||||| |||||    
T  42108 acctccgatccactgaaagaaaccataaaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaa 42189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1384 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1384
Description:

Target: scaffold1384; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 1429 - 1523
Alignment:
Q  102 aaatacacgtcaccacctaaaacaaactctt-cacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcatcactactcacccccaaa 195  Q
    |||||||||||||||||||||||  |||| | ||| | ||| |||||||||||||||||||||| ||| || |||| |||||||| |||||||||    
T  1429 aaatacacgtcaccacctaaaactgactcctacacgagaacaaccactgtaaaaacgatatccaacaccacacgtcgtcactactgacccccaaa 1523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 957 - 1068
Alignment:
Q  271 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccga 368  Q
    |||||||  |||||||||||||| |||| | || |||| || ||| |||| |||| ||||| | |||||||||| ||||| ||||  |||||||||||||    
T  957 aaagatcaatcatcttccaccacttcttaatctccgattcatcgagagaacacta-aaaaacctcaaaaccaaaacttaaaccaaagaactgactcccga 1055  T
Q  369 tctcgaaacaaaa 381  Q
    ||||||| |||||    
T  1056 tctcgaatcaaaa 1068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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