View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4884_high_3 (Length: 372)

Name: NF4884_high_3
Description: NF4884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4884_high_3
NF4884_high_3
[»] chr4 (67 HSPs)
chr4 (8-359)||(48097945-48098305)
chr4 (210-357)||(49532216-49532361)
chr4 (256-357)||(2063470-2063571)
chr4 (210-357)||(19597113-19597261)
chr4 (238-341)||(45743326-45743429)
chr4 (265-345)||(12658252-12658332)
chr4 (265-356)||(2818355-2818445)
chr4 (251-357)||(52650695-52650801)
chr4 (253-357)||(53261553-53261657)
chr4 (243-354)||(36876054-36876165)
chr4 (214-357)||(40252651-40252793)
chr4 (256-359)||(41370178-41370281)
chr4 (256-357)||(24546718-24546819)
chr4 (265-352)||(4394908-4394995)
chr4 (229-368)||(25196120-25196259)
chr4 (253-357)||(7852550-7852655)
chr4 (293-358)||(22889254-22889319)
chr4 (293-358)||(22940918-22940983)
chr4 (256-357)||(41956440-41956541)
chr4 (253-358)||(49011890-49011995)
chr4 (273-358)||(53737821-53737906)
chr4 (298-358)||(30978700-30978760)
chr4 (208-320)||(32692914-32693026)
chr4 (254-352)||(3179014-3179113)
chr4 (253-304)||(7746135-7746186)
chr4 (281-356)||(47995772-47995847)
chr4 (293-356)||(49951737-49951800)
chr4 (293-356)||(50343883-50343946)
chr4 (253-319)||(27981409-27981475)
chr4 (266-332)||(49236699-49236765)
chr4 (267-357)||(50774956-50775046)
chr4 (256-357)||(13800706-13800807)
chr4 (265-358)||(23016241-23016334)
chr4 (253-357)||(51834909-51835014)
chr4 (315-359)||(11281567-11281611)
chr4 (264-352)||(12912862-12912950)
chr4 (256-332)||(17932230-17932306)
chr4 (281-365)||(20394625-20394709)
chr4 (253-357)||(25115270-25115374)
chr4 (288-340)||(39279204-39279256)
chr4 (293-357)||(40173525-40173589)
chr4 (296-356)||(47937859-47937919)
chr4 (265-352)||(40444447-40444533)
chr4 (253-354)||(54016028-54016131)
chr4 (256-322)||(5839557-5839623)
chr4 (315-357)||(8607676-8607718)
chr4 (257-359)||(19652626-19652728)
chr4 (253-358)||(21687592-21687698)
chr4 (8-38)||(22811268-22811298)
chr4 (253-335)||(25751708-25751790)
chr4 (316-358)||(31262910-31262951)
chr4 (309-359)||(46521497-46521547)
chr4 (254-356)||(51105918-51106020)
chr4 (294-351)||(4850631-4850688)
chr4 (308-357)||(12618756-12618805)
chr4 (297-342)||(18939919-18939964)
chr4 (297-350)||(20262104-20262157)
chr4 (308-357)||(32284877-32284926)
chr4 (265-357)||(38682008-38682101)
chr4 (293-358)||(44690310-44690375)
chr4 (309-358)||(46010627-46010676)
chr4 (267-356)||(50086429-50086518)
chr4 (265-352)||(4391968-4392056)
chr4 (325-357)||(13585336-13585368)
chr4 (211-271)||(20022271-20022331)
chr4 (288-352)||(47247814-47247878)
chr4 (205-249)||(53375051-53375095)
[»] chr7 (48 HSPs)
chr7 (210-354)||(34681690-34681835)
chr7 (216-358)||(18926321-18926462)
chr7 (255-352)||(22688960-22689057)
chr7 (265-358)||(35567108-35567201)
chr7 (243-351)||(19619993-19620101)
chr7 (270-358)||(27338256-27338344)
chr7 (288-352)||(33922782-33922846)
chr7 (261-356)||(35599817-35599912)
chr7 (265-357)||(43996348-43996441)
chr7 (251-295)||(34593373-34593417)
chr7 (288-358)||(31498671-31498741)
chr7 (253-358)||(31902756-31902861)
chr7 (288-357)||(33887894-33887963)
chr7 (253-358)||(40722353-40722458)
chr7 (255-352)||(45869032-45869129)
chr7 (316-356)||(6392177-6392217)
chr7 (281-345)||(9031703-9031767)
chr7 (230-358)||(34299727-34299855)
chr7 (211-358)||(43492166-43492314)
chr7 (265-365)||(46716166-46716266)
chr7 (286-357)||(6387993-6388064)
chr7 (281-336)||(37129847-37129902)
chr7 (267-357)||(1360531-1360621)
chr7 (288-358)||(26402824-26402894)
chr7 (243-352)||(8237950-8238059)
chr7 (301-358)||(35875079-35875136)
chr7 (235-358)||(36973330-36973455)
chr7 (251-299)||(10419926-10419974)
chr7 (252-352)||(24299137-24299237)
chr7 (210-357)||(3267574-3267721)
chr7 (290-357)||(30626116-30626183)
chr7 (266-357)||(34398095-34398186)
chr7 (298-356)||(41431142-41431201)
chr7 (243-345)||(2964056-2964158)
chr7 (268-357)||(676395-676483)
chr7 (309-358)||(5248696-5248745)
chr7 (325-358)||(5907818-5907851)
chr7 (210-275)||(17255382-17255447)
chr7 (258-359)||(19914947-19915048)
chr7 (298-363)||(23187248-23187313)
chr7 (8-41)||(24324907-24324940)
chr7 (279-356)||(25886166-25886243)
chr7 (308-341)||(37138683-37138716)
chr7 (316-357)||(44452112-44452153)
chr7 (325-357)||(9719069-9719101)
chr7 (255-319)||(28324104-28324168)
chr7 (316-352)||(39241570-39241606)
chr7 (210-358)||(47754471-47754619)
[»] chr1 (53 HSPs)
chr1 (235-357)||(44442245-44442367)
chr1 (251-359)||(5423751-5423859)
chr1 (256-356)||(46592479-46592579)
chr1 (252-358)||(40053287-40053393)
chr1 (236-358)||(26857181-26857303)
chr1 (255-368)||(5250910-5251023)
chr1 (246-358)||(1048670-1048781)
chr1 (279-354)||(10650382-10650457)
chr1 (281-359)||(1600942-1601020)
chr1 (288-358)||(39973886-39973956)
chr1 (251-358)||(3047861-3047968)
chr1 (279-354)||(31042999-31043074)
chr1 (253-356)||(33791746-33791849)
chr1 (279-357)||(5417703-5417780)
chr1 (288-358)||(6983032-6983102)
chr1 (202-339)||(14758572-14758709)
chr1 (253-341)||(32787262-32787351)
chr1 (293-358)||(42573816-42573881)
chr1 (253-354)||(48947202-48947303)
chr1 (272-356)||(10370410-10370494)
chr1 (290-358)||(34861256-34861324)
chr1 (257-357)||(44584061-44584161)
chr1 (294-357)||(42787757-42787820)
chr1 (283-338)||(45359284-45359339)
chr1 (293-359)||(31807827-31807893)
chr1 (293-358)||(35259093-35259158)
chr1 (293-354)||(38978097-38978158)
chr1 (229-358)||(40203061-40203190)
chr1 (267-359)||(33744156-33744248)
chr1 (253-356)||(48022359-48022463)
chr1 (267-358)||(4521029-4521120)
chr1 (279-358)||(5115639-5115718)
chr1 (259-357)||(26687533-26687632)
chr1 (210-356)||(4040889-4041034)
chr1 (290-356)||(27934773-27934839)
chr1 (272-354)||(37037645-37037727)
chr1 (265-303)||(39546923-39546961)
chr1 (287-357)||(39912251-39912321)
chr1 (259-356)||(2633027-2633124)
chr1 (317-354)||(3755999-3756036)
chr1 (292-356)||(6282360-6282425)
chr1 (308-357)||(36621928-36621977)
chr1 (316-357)||(37976823-37976864)
chr1 (253-345)||(38294015-38294108)
chr1 (293-357)||(48933-48997)
chr1 (308-356)||(64888-64936)
chr1 (283-335)||(2292300-2292352)
chr1 (308-360)||(6285838-6285890)
chr1 (293-352)||(7481421-7481481)
chr1 (257-361)||(9500883-9500987)
chr1 (253-305)||(9931822-9931874)
chr1 (260-352)||(44829272-44829364)
chr1 (253-305)||(46123956-46124008)
[»] chr2 (54 HSPs)
chr2 (259-358)||(44195501-44195600)
chr2 (211-356)||(33454964-33455109)
chr2 (232-332)||(36480514-36480617)
chr2 (213-358)||(13538390-13538535)
chr2 (252-352)||(9049156-9049256)
chr2 (244-357)||(14663177-14663291)
chr2 (289-363)||(33275936-33276010)
chr2 (211-358)||(32859779-32859927)
chr2 (279-360)||(8964384-8964465)
chr2 (265-356)||(38292364-38292456)
chr2 (211-354)||(41543975-41544119)
chr2 (265-352)||(45372735-45372823)
chr2 (201-356)||(565648-565804)
chr2 (210-358)||(3882610-3882758)
chr2 (266-353)||(9153494-9153581)
chr2 (255-354)||(40347956-40348055)
chr2 (258-356)||(2825968-2826066)
chr2 (253-339)||(33962950-33963036)
chr2 (308-357)||(16717604-16717653)
chr2 (288-352)||(7270298-7270361)
chr2 (210-349)||(18684365-18684504)
chr2 (255-358)||(18734346-18734449)
chr2 (292-359)||(28858097-28858163)
chr2 (308-358)||(45076190-45076240)
chr2 (265-321)||(11278764-11278820)
chr2 (258-358)||(25622528-25622627)
chr2 (293-357)||(37284933-37284997)
chr2 (214-358)||(42924386-42924529)
chr2 (293-356)||(431681-431744)
chr2 (293-356)||(12762918-12762981)
chr2 (232-357)||(16944759-16944885)
chr2 (232-357)||(17015424-17015550)
chr2 (258-368)||(24765319-24765429)
chr2 (315-357)||(27921885-27921927)
chr2 (256-357)||(44002378-44002480)
chr2 (265-354)||(14295626-14295715)
chr2 (253-358)||(20064905-20065010)
chr2 (256-357)||(20128325-20128426)
chr2 (321-358)||(24389698-24389735)
chr2 (288-353)||(25626947-25627012)
chr2 (313-354)||(29865839-29865880)
chr2 (298-358)||(30869614-30869672)
chr2 (279-340)||(31017341-31017402)
chr2 (280-357)||(39640136-39640213)
chr2 (316-357)||(39647843-39647884)
chr2 (308-357)||(41079457-41079506)
chr2 (260-360)||(3199502-3199602)
chr2 (252-364)||(6411380-6411492)
chr2 (308-352)||(10348950-10348994)
chr2 (288-356)||(18375058-18375126)
chr2 (313-365)||(27133063-27133115)
chr2 (255-358)||(31513747-31513850)
chr2 (308-356)||(37617451-37617499)
chr2 (265-357)||(39309751-39309843)
[»] chr8 (63 HSPs)
chr8 (237-358)||(29487050-29487172)
chr8 (209-358)||(12002261-12002410)
chr8 (244-357)||(39691112-39691225)
chr8 (256-357)||(37564342-37564443)
chr8 (210-358)||(31264991-31265139)
chr8 (239-356)||(42022590-42022703)
chr8 (280-358)||(20279589-20279667)
chr8 (280-358)||(21066216-21066294)
chr8 (265-352)||(25382622-25382710)
chr8 (259-359)||(15352086-15352183)
chr8 (258-357)||(1502682-1502782)
chr8 (209-357)||(25279924-25280070)
chr8 (200-358)||(14016821-14016979)
chr8 (211-357)||(39594454-39594600)
chr8 (251-340)||(11727905-11727993)
chr8 (251-307)||(42880879-42880935)
chr8 (252-358)||(41106004-41106110)
chr8 (253-357)||(27801232-27801337)
chr8 (259-356)||(43841028-43841125)
chr8 (265-357)||(12639925-12640017)
chr8 (210-354)||(41385263-41385407)
chr8 (253-357)||(44042532-44042636)
chr8 (207-358)||(1876443-1876594)
chr8 (257-356)||(12787844-12787943)
chr8 (317-356)||(38019489-38019528)
chr8 (298-352)||(32271170-32271224)
chr8 (288-358)||(34336515-34336585)
chr8 (279-357)||(42801073-42801151)
chr8 (265-358)||(4166489-4166582)
chr8 (290-354)||(11041065-11041129)
chr8 (253-357)||(33285932-33286036)
chr8 (315-359)||(36176691-36176735)
chr8 (254-357)||(22209401-22209504)
chr8 (246-352)||(44907218-44907325)
chr8 (253-358)||(31844224-31844330)
chr8 (281-354)||(34477810-34477884)
chr8 (279-357)||(36782796-36782874)
chr8 (212-262)||(38710811-38710861)
chr8 (296-358)||(45368773-45368835)
chr8 (253-357)||(1445140-1445245)
chr8 (279-356)||(8785316-8785393)
chr8 (298-347)||(12229994-12230042)
chr8 (312-357)||(12782772-12782817)
chr8 (313-346)||(17599234-17599267)
chr8 (316-357)||(24103121-24103162)
chr8 (253-354)||(24457825-24457926)
chr8 (309-358)||(36348552-36348601)
chr8 (316-356)||(2376798-2376838)
chr8 (293-341)||(5218083-5218131)
chr8 (265-357)||(5219434-5219525)
chr8 (308-368)||(5293806-5293866)
chr8 (313-357)||(10565340-10565384)
chr8 (293-357)||(11533227-11533291)
chr8 (313-357)||(13520989-13521033)
chr8 (313-357)||(13610524-13610568)
chr8 (316-356)||(18842325-18842365)
chr8 (293-357)||(25163069-25163133)
chr8 (316-356)||(30158132-30158172)
chr8 (288-356)||(30535014-30535082)
chr8 (320-356)||(38047684-38047720)
chr8 (279-359)||(38167438-38167518)
chr8 (315-359)||(39644203-39644247)
chr8 (284-356)||(43238179-43238251)
[»] chr3 (54 HSPs)
chr3 (210-359)||(48551033-48551180)
chr3 (265-356)||(11692729-11692820)
chr3 (255-358)||(54290786-54290889)
chr3 (256-356)||(43803965-43804065)
chr3 (288-358)||(24313545-24313615)
chr3 (251-358)||(40690186-40690289)
chr3 (279-357)||(53040464-53040542)
chr3 (293-357)||(4824660-4824724)
chr3 (265-341)||(37388418-37388494)
chr3 (258-354)||(54911199-54911295)
chr3 (214-357)||(25317800-25317943)
chr3 (260-358)||(38009027-38009126)
chr3 (293-356)||(46725653-46725716)
chr3 (244-334)||(30299298-30299388)
chr3 (251-341)||(51039766-51039856)
chr3 (272-345)||(31581401-31581473)
chr3 (293-358)||(37708431-37708496)
chr3 (293-358)||(42846053-42846118)
chr3 (253-334)||(55417458-55417538)
chr3 (316-368)||(3027055-3027107)
chr3 (255-359)||(3973806-3973910)
chr3 (288-356)||(9342695-9342763)
chr3 (293-357)||(45757924-45757988)
chr3 (211-323)||(46547746-46547857)
chr3 (288-356)||(48322248-48322316)
chr3 (318-358)||(50604047-50604087)
chr3 (290-357)||(11465669-11465736)
chr3 (262-345)||(23159875-23159958)
chr3 (315-358)||(30082851-30082894)
chr3 (260-319)||(47930114-47930173)
chr3 (309-359)||(7674286-7674336)
chr3 (308-358)||(8703376-8703426)
chr3 (308-358)||(9055263-9055313)
chr3 (244-322)||(16992400-16992478)
chr3 (279-357)||(28691957-28692035)
chr3 (265-339)||(29484855-29484929)
chr3 (293-351)||(37359467-37359525)
chr3 (244-358)||(38388706-38388820)
chr3 (267-357)||(39400298-39400388)
chr3 (284-357)||(1997302-1997375)
chr3 (309-358)||(4275270-4275319)
chr3 (279-360)||(25299070-25299151)
chr3 (316-357)||(29612015-29612056)
chr3 (309-358)||(32734675-32734724)
chr3 (288-365)||(39976713-39976789)
chr3 (313-354)||(47915021-47915062)
chr3 (297-357)||(2831542-2831602)
chr3 (255-359)||(3995967-3996071)
chr3 (279-359)||(4009519-4009599)
chr3 (308-336)||(24658498-24658526)
chr3 (256-360)||(28874484-28874588)
chr3 (326-362)||(32521376-32521412)
chr3 (208-328)||(34591051-34591171)
chr3 (253-357)||(51592028-51592132)
[»] chr5 (41 HSPs)
chr5 (237-356)||(24041014-24041133)
chr5 (245-358)||(16161413-16161529)
chr5 (256-357)||(25437884-25437986)
chr5 (281-355)||(33590051-33590125)
chr5 (298-358)||(34032142-34032202)
chr5 (267-328)||(4434654-4434715)
chr5 (293-357)||(8761922-8761986)
chr5 (267-358)||(10359084-10359175)
chr5 (281-358)||(23023627-23023704)
chr5 (211-358)||(30501103-30501252)
chr5 (211-358)||(30541446-30541595)
chr5 (316-357)||(31914165-31914206)
chr5 (280-357)||(36160314-36160391)
chr5 (284-357)||(36486906-36486979)
chr5 (281-356)||(967098-967173)
chr5 (281-359)||(2864234-2864313)
chr5 (278-368)||(27310245-27310336)
chr5 (288-359)||(42265429-42265500)
chr5 (266-352)||(5149802-5149888)
chr5 (251-357)||(41583538-41583644)
chr5 (272-357)||(3758195-3758280)
chr5 (316-357)||(4695067-4695108)
chr5 (255-319)||(17437064-17437128)
chr5 (308-352)||(26663635-26663679)
chr5 (308-352)||(26935230-26935274)
chr5 (293-356)||(12448667-12448730)
chr5 (210-356)||(18229565-18229712)
chr5 (290-352)||(17774326-17774388)
chr5 (265-331)||(18963833-18963899)
chr5 (253-331)||(20125661-20125739)
chr5 (294-356)||(25767573-25767635)
chr5 (253-357)||(8221118-8221222)
chr5 (265-354)||(14309106-14309195)
chr5 (283-356)||(25331397-25331470)
chr5 (309-358)||(27146866-27146915)
chr5 (256-301)||(36843168-36843213)
chr5 (308-357)||(39382507-39382556)
chr5 (293-354)||(41568714-41568775)
chr5 (280-352)||(22873471-22873543)
chr5 (265-313)||(29184960-29185008)
chr5 (253-357)||(42877239-42877343)
[»] chr6 (30 HSPs)
chr6 (251-357)||(25028703-25028809)
chr6 (243-358)||(6586414-6586529)
chr6 (211-358)||(31702705-31702852)
chr6 (251-345)||(32914969-32915063)
chr6 (254-358)||(4810535-4810639)
chr6 (257-356)||(5678482-5678581)
chr6 (279-358)||(12132521-12132600)
chr6 (265-360)||(387453-387549)
chr6 (215-355)||(23344568-23344709)
chr6 (252-337)||(30910436-30910521)
chr6 (272-356)||(12307821-12307905)
chr6 (298-358)||(13445783-13445843)
chr6 (210-357)||(29716728-29716876)
chr6 (244-319)||(2157190-2157265)
chr6 (258-357)||(6555050-6555149)
chr6 (259-354)||(8176324-8176419)
chr6 (265-332)||(12735500-12735567)
chr6 (313-356)||(29988394-29988437)
chr6 (279-358)||(30739593-30739672)
chr6 (279-354)||(34921565-34921640)
chr6 (253-359)||(3354843-3354949)
chr6 (307-341)||(24194179-24194213)
chr6 (253-357)||(12226661-12226766)
chr6 (313-358)||(29407997-29408042)
chr6 (317-358)||(34185097-34185138)
chr6 (208-320)||(4806465-4806577)
chr6 (254-358)||(13070513-13070617)
chr6 (253-301)||(26311861-26311909)
chr6 (289-357)||(30038864-30038932)
chr6 (284-320)||(31759826-31759862)
[»] scaffold0011 (1 HSPs)
scaffold0011 (211-354)||(219188-219334)
[»] scaffold0009 (1 HSPs)
scaffold0009 (254-357)||(189064-189167)
[»] scaffold0219 (1 HSPs)
scaffold0219 (286-352)||(21300-21366)
[»] scaffold0236 (1 HSPs)
scaffold0236 (252-341)||(19578-19667)
[»] scaffold0010 (1 HSPs)
scaffold0010 (293-358)||(26695-26760)
[»] scaffold0717 (1 HSPs)
scaffold0717 (290-356)||(5005-5071)
[»] scaffold0027 (1 HSPs)
scaffold0027 (312-358)||(122531-122577)
[»] scaffold1681 (1 HSPs)
scaffold1681 (308-357)||(672-721)
[»] scaffold0063 (1 HSPs)
scaffold0063 (8-41)||(58066-58099)
[»] scaffold0053 (1 HSPs)
scaffold0053 (298-358)||(5756-5816)


Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 8 - 359
Target Start/End: Complemental strand, 48098305 - 48097945
Alignment:
Q  8 caccagagaaacaccaaatcacaccaaacaagataaaacatgcaagatnnnnnnnnttcaaagtaggctcgtgatctaaataaagatcggctgaatcaaa 107  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||        |||||||||| |||||||||| ||||||||||||||||||||||    
T  48098305 cacctgagaaacaccaaatcacaccaaacatgataaaacatgcaagataaaaaaaattcaaagtagcctcgtgatctgaataaagatcggctgaatcaaa 48098206  T
Q  108 tttaggcgagctacatcatatgagctttttgctaaataattgta---------gatttgccatttatttgatcaattgctttggtacgaaatatagtgaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||||||||||||||| | ||||    
T  48098205 tttaggcgagctacatcatatgagctttttgctaaataattgtaataattgtagatttgccatttgtttgatcaattgctttggtacgaaatagaatgaa 48098106  T
Q  199 taatttaatttagggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaa 298  Q
    ||||||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48098105 taatttaatctagggaaatgttaacgattgtttccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgga 48098006  T
Q  299 aattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  48098005 aattgaactatttaacttttttaaagaataatttcttaatttagaatacttaaaaagtgct 48097945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 49532216 - 49532361
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaat 309  Q
    |||||||||||||||| || ||| | ||||||  ||||||  ||||||||||||||||| |||||||||||||||||||||| |||| ||||||||  ||    
T  49532216 agggaaatgttaacgaatgtccc-gagacactctttaagggccttaaatagtaacttttaataaaaacatgtgtatttaatgcattggaaattgaattat 49532314  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    || | |||| ||||||||||||||||||||| ||||||||| ||||||    
T  49532315 ttga-ttttataaagaataatttcttaatttggaatgcttacagagtg 49532361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 357
Target Start/End: Complemental strand, 2063571 - 2063470
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    |||||||||||||||| ||||  ||||||||||||  |||| |||||||||  ||| ||||||||||||||||| ||| |||||||| ||||||||||||    
T  2063571 aatagtaactttttatgaaaatttgtgtatttaatacattggaaattgaactgtttgacttttttaaagaataacttcctaatttagcatgcttaaagag 2063472  T
Q  356 tg 357  Q
    ||    
T  2063471 tg 2063470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 19597113 - 19597261
Alignment:
Q  210 agggaaatgttaacgattggccccggga-cacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaa 308  Q
    |||||||||||||| | || | |||||| ||||  |||||| ||||||||| |||| |||||||||||  | |||||| |||| |||  ||||||||| |    
T  19597113 agggaaatgttaacaagtgcctccgggaacactctttaagggtcttaaataataacattttataaaaatttatgtattcaatgcattagaaattgaacta 19597212  T
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||| || |||||||||||||||||| |||| ||||||||||||| ||||    
T  19597213 tttgacatttttaaagaataatttcctaatgtagaatgcttaaaaagtg 19597261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 45743429 - 45743326
Alignment:
Q  238 cacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaa 337  Q
    |||| ||||||| ||||||||||||||| ||||| ||||  |||||| | | |||||||||||||||| | ||| || ||||||||||||||||||||||    
T  45743429 cactggttaagggtcttaaatagtaactctttatgaaaagttgtgtaatcactgtattgaaaattgaaaactttgacatttttaaagaataatttcttaa 45743330  T
Q  338 ttta 341  Q
    ||||    
T  45743329 ttta 45743326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 12658332 - 12658252
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaat 345  Q
    ||||||||||||||||||||||||||| ||| ||||||| |  |||||| |||||||||||||| ||| ||||||||||||    
T  12658332 tttttataaaaacatgtgtatttaatgcattaaaaattgtaatatttaaattttttaaagaatagttttttaatttagaat 12658252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 356
Target Start/End: Complemental strand, 2818445 - 2818355
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||||||||||||| ||| ||||| |||| |||||||||  ||| || |||| ||||||||||||||||||||| ||||||||||||||    
T  2818445 tttttataaaaacatgt-tatctaatgcattggaaattgaactttttgaccttttaaaagaataatttcttaatttaaaatgcttaaagagt 2818355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 357
Target Start/End: Original strand, 52650695 - 52650801
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgctta 350  Q
    ||||||||||||| ||||||| ||||  |||||| | | || ||||||||||||| | ||| || ||| ||||||||||||||||||||||| ||| |||    
T  52650695 tcttaaatagtaattttttatgaaaaattgtgtaatcagtgaattgaaaattgaaaattttgacatttgtaaagaataatttcttaatttagcatgttta 52650794  T
Q  351 aagagtg 357  Q
    |||||||    
T  52650795 aagagtg 52650801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 53261657 - 53261553
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||||||||||||||||||   |||||| | | || |||| |||||||| | ||| |  |||||||||||||||| |||||||||| |||||||||    
T  53261657 ttaaatagtaactttttataaaagtttgtgtaatcactgcattggaaattgaaaacttttaaatttttaaagaataattacttaatttagcatgcttaaa 53261558  T
Q  353 gagtg 357  Q
    |||||    
T  53261557 gagtg 53261553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 354
Target Start/End: Original strand, 36876054 - 36876165
Alignment:
Q  243 gttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttag 342  Q
    |||||||||||||| | ||||||||||||||||   |||||| | ||||||||| |||||||| |  || || |||| |||||||| || ||||||||||    
T  36876054 gttaaggttcttaagtggtaactttttataaaagtttgtgtaatcaatgtattggaaattgaaaacatttacattttaaaagaatagttacttaatttag 36876153  T
Q  343 aatgcttaaaga 354  Q
     |||||||||||    
T  36876154 catgcttaaaga 36876165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 357
Target Start/End: Complemental strand, 40252793 - 40252651
Alignment:
Q  214 aaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaa 313  Q
    |||||||||||| || | ||||| |||| |||||||   ||||||||||| ||||||| |||   |||||| | |||||||||||||||||| | |||||    
T  40252793 aaatgttaacgagtgtctccggggcactggttaaggactttaaatagtaaatttttatgaaagt-tgtgtaatcaatgtattgaaaattgaaaactttaa 40252695  T
Q  314 cttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    | |||||||| || |||| |||||||||  ||| ||||||||||    
T  40252694 catttttaaataacaattacttaatttaatatgtttaaagagtg 40252651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 256 - 359
Target Start/End: Original strand, 41370178 - 41370281
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    |||||||| ||||||| ||||  |||||| | |||| |||||||||||||  ||||||||||||| |  |||||||||||||||| || ||||||| |||    
T  41370178 aatagtaagtttttatgaaaatttgtgtaatcaatgcattgaaaattgaaatatttaacttttttgagaaataatttcttaatttggattgcttaatgag 41370277  T
Q  356 tgct 359  Q
    ||||    
T  41370278 tgct 41370281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 24546718 - 24546819
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    |||||||| ||||||| ||||  ||||||||||||  |||| |||||||||   || | ||||||||||||||||||| |||||||  ||||||||||||    
T  24546718 aatagtaattttttatgaaaatttgtgtatttaatacattggaaattgaactgcttgaattttttaaagaataatttcctaatttaacatgcttaaagag 24546817  T
Q  356 tg 357  Q
    ||    
T  24546818 tg 24546819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 4394995 - 4394908
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||||||| | ||||||| |||||||| |||||| ||  |||| | ||||||||||||||||| ||||||||| |||| |||||    
T  4394995 tttttataaaaatacgtgtattcaatgtattaaaaattaaaatatttgatttttttaaagaataattacttaatttaaaatgtttaaa 4394908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 25196259 - 25196120
Alignment:
Q  229 gccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaata 328  Q
    |||||||| ||||| ||||| || ||| ||||||| ||| ||| |||||||||||| ||||||| ||| ||||  ||  |||| ||||||||| | | ||    
T  25196259 gccccggggcactttttaagatttttatatagtaattttgtatgaaaacatgtgtaattaatgtcttggaaatcaaaatatttgacttttttataaatta 25196160  T
Q  329 atttcttaatttagaatgcttaaagagtgctttggaggca 368  Q
    |||| ||  |||||||| ||||||||||| || |||||||    
T  25196159 attttttcttttagaatccttaaagagtgtttcggaggca 25196120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 7852550 - 7852655
Alignment:
Q  253 ttaaatagtaacttttta-taaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    ||||||||||| |||||| | ||||  |||||||| |||| ||||||||||| |  | |||| ||||| ||||||||||| || ||||||| ||||||||    
T  7852550 ttaaatagtaagtttttaatgaaaagttgtgtattaaatgcattgaaaattgtaatagttaattttttaaaagaataattactaaatttaggatgcttaa 7852649  T
Q  352 agagtg 357  Q
    ||||||    
T  7852650 agagtg 7852655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 22889319 - 22889254
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||| |||||||| |||||||| || |||| |||||||||||| | |||||||||||    
T  22889319 attgaaaattgaaaaatttaacatttttaaaaaacaattacttaatttagaaagtttaaagagtgc 22889254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 22940983 - 22940918
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||| |||||||| |||||||| || |||| |||||||||||| | |||||||||||    
T  22940983 attgaaaattgaaaaatttaacatttttaaaaaacaattacttaatttagaaagtttaaagagtgc 22940918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 41956440 - 41956541
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    |||||||| ||||||| ||||  |||||| | ||||  ||||||||||||  |||||| ||| |||||||||| ||||||| ||| || |||||||||||    
T  41956440 aatagtaaatttttatgaaaaattgtgtaatcaatgcgttgaaaattgaaatatttaaatttcttaaagaatactttcttattttggattgcttaaagag 41956539  T
Q  356 tg 357  Q
    ||    
T  41956540 tg 41956541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 49011890 - 49011995
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||| ||||| | ||||| |||| |||||||| || ||||||||||  ||| ||||||||||| |||||  ||||| ||| | ||| ||||||    
T  49011890 ttaaatagtaagtttttgtgaaaacttgtgcatttaatgcatcgaaaattgaagtattaaacttttttaatgaatagattcttgattaaaaatccttaaa 49011989  T
Q  353 gagtgc 358  Q
    ||||||    
T  49011990 gagtgc 49011995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 358
Target Start/End: Original strand, 53737821 - 53737906
Alignment:
Q  273 aaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||| |||||||| |||| |||| |||| |||  |||| | |||||||||||||||||||||| ||| ||| |||||||||||||    
T  53737821 aaaacgtgtgtattcaatgcattggaaatcgaaatatttgaattttttaaagaataatttcttattttggaacgcttaaagagtgc 53737906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 30978700 - 30978760
Alignment:
Q  298 aaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||| |||| ||||||||||  ||| |||||||||||| |||||||||||||||||    
T  30978700 aaattgaactatttgacttttttaataaatcatttcttaatttggaatgcttaaagagtgc 30978760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 320
Target Start/End: Original strand, 32692914 - 32693026
Alignment:
Q  208 ttagggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaaca 307  Q
    |||||||||||||||||| || | ||||||||||  ||||||  | | |||||||| ||||||| |||| ||||||| | |||||||||||| ||| |      
T  32692914 ttagggaaatgttaacgagtgcctccgggacactctttaaggaccattaatagtaagtttttatgaaaatatgtgtaatcaatgtattgaaatttgtaac 32693013  T
Q  308 atttaactttttt 320  Q
    ||||| |||||||    
T  32693014 atttacctttttt 32693026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 3179014 - 3179113
Alignment:
Q  254 taaatagtaactttttataaaaacatgtgtatttaa-tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||||||||||||| |||   |||||| | || ||||||| |||||||| | ||||||||||||||| | ||||| ||| ||||||||| ||||||    
T  3179014 taaatagtaactttttatgaaagtttgtgtaataaagtgtattggaaattgaaaactttaacttttttaaaaattaattacttgatttagaatacttaaa 3179113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 7746135 - 7746186
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattga 304  Q
    |||||||||||||||| ||||||| ||||||||||| || ||||||||||||    
T  7746135 ttaaatagtaacttttaataaaaatatgtgtatttagtgcattgaaaattga 7746186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 356
Target Start/End: Original strand, 47995772 - 47995847
Alignment:
Q  281 tgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||| |||| ||||||||||| |  | |||||||||| ||||| ||||| || |||||||||||||||||||||    
T  47995772 tgtattgaatgcattgaaaattgtaataattaactttttaaaagagtaattactaaatttagaatgcttaaagagt 47995847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 356
Target Start/End: Original strand, 49951737 - 49951800
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||||||||| | ||| || |||| ||||||||||| |||||||||| |||||||||||||    
T  49951737 attgaaaattgaaaactttgacattttaaaagaataattacttaatttagcatgcttaaagagt 49951800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 356
Target Start/End: Original strand, 50343883 - 50343946
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||||||| ||  |||| ||||||||||||||||||| |||| |||| ||||||||||||||    
T  50343883 attgaaaattaaaatatttgacttttttaaagaataattacttattttaaaatgcttaaagagt 50343946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 27981475 - 27981409
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttt 319  Q
    ||||||||||||||| |||  ||| ||||||| ||||||||||||||||||||  |||||| |||||    
T  27981475 ttaaatagtaactttgtatgtaaatatgtgtaattaatgtattgaaaattgaaatatttaatttttt 27981409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 49236765 - 49236699
Alignment:
Q  266 ttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataattt 332  Q
    |||||||||||  |||||||||| ||||||||||||| ||  |||||  ||||||||||||||||||    
T  49236765 ttttataaaaatttgtgtatttattgtattgaaaattaaattatttattttttttaaagaataattt 49236699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 357
Target Start/End: Complemental strand, 50775046 - 50774956
Alignment:
Q  267 tttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||| |||| ||||||| | ||| | ||||||||  ||  |||||||||||||||||||||||| |||| |||||||| |||||| ||||    
T  50775046 tttatgaaaatatgtgtaatcaatatgttgaaaatcaaaatatttaacttttttaaagaataattacttattttagaatacttaaaaagtg 50774956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 13800706 - 13800807
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    |||||||||||| ||| ||||  |||||| | ||||||| | || ||| |  |||| |||||||||||||||| ||||| ||||||| || |||||||||    
T  13800706 aatagtaactttctatgaaaaactgtgtaatcaatgtataggaatttgtaatatttgacttttttaaagaatattttctaaatttaggatccttaaagag 13800805  T
Q  356 tg 357  Q
    ||    
T  13800806 tg 13800807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 358
Target Start/End: Original strand, 23016241 - 23016334
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||   | |||||| |||| |||| ||||||||   ||| |||| |||||| |||||||||||||||| ||||||| |||||||||    
T  23016241 tttttataaaagtctatgtattcaatgcattggaaattgaaatgtttgacttctttaaataataatttcttaatttggaatgctcaaagagtgc 23016334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 51835014 - 51834909
Alignment:
Q  253 ttaaatagtaacttttta-taaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    ||||||||||| |||||| | ||||  ||||||||||||| |||| |||||  |  | || ||||||| ||||||||||| || ||||||| ||||||||    
T  51835014 ttaaatagtaaatttttaatgaaaagttgtgtatttaatgcattggaaattataatagttgactttttaaaagaataattgctaaatttaggatgcttaa 51834915  T
Q  352 agagtg 357  Q
    ||||||    
T  51834914 agagtg 51834909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 11281611 - 11281567
Alignment:
Q  315 ttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    |||||||| |||||||||||||| ||||||| |||||||||||||    
T  11281611 ttttttaatgaataatttcttaacttagaatccttaaagagtgct 11281567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 12912862 - 12912950
Alignment:
Q  264 ctttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||||||||  |||||||||||||  ||  ||||||||  |||| ||||||||||  ||| ||||| ||||||| ||||||||||    
T  12912862 ctttttataaaaatttgtgtatttaatgctttagaaattgaattatttgacttttttaataaatgatttcctaatttaaaatgcttaaa 12912950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 17932230 - 17932306
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataattt 332  Q
    |||||||| ||||||||| || || ||||||||| ||||| |||||||||  |||||||||||| ||  ||||||||    
T  17932230 aatagtaaatttttataacaatatatgtatttaaagtatttaaaattgaagtatttaactttttcaataaataattt 17932306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 365
Target Start/End: Complemental strand, 20394709 - 20394625
Alignment:
Q  281 tgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgctttggag 365  Q
    |||||| ||||||||| |||||| |  | || ||||||| ||||||||||| || ||||| | |||||||||||||||| |||||    
T  20394709 tgtattgaatgtattggaaattgtaatagttcactttttaaaagaataattactaaatttgggatgcttaaagagtgctctggag 20394625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 25115270 - 25115374
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||| ||||||||||||  |||||||| | || |||| |||||| |  | |||||||||| ||| ||||||| || ||||| | || ||||||    
T  25115270 ttaaatagtaagtttttataaaaagttgtgtattcactgcattggaaattgtaatagttaactttttaaaataataattactaaattttggattcttaaa 25115369  T
Q  353 gagtg 357  Q
    |||||    
T  25115370 gagtg 25115374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 39279256 - 39279204
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaattt 340  Q
    |||| |||| |||||||| ||||| |||||||||| |||||||||||||||||    
T  39279256 aatgcattggaaattgaagaatttgacttttttaaggaataatttcttaattt 39279204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 40173525 - 40173589
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||| || | |||||| ||||||| |||| ||| |||||||||||||| ||||||||||    
T  40173525 attgaaaattaaaaactttaacatttttaatgaatgattacttaatttagaatgtttaaagagtg 40173589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 47937919 - 47937859
Alignment:
Q  296 gaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||||||| | ||| ||||||||||||||||||| | |||||||| ||| |||||||||    
T  47937919 gaaaattgaaaactttgacttttttaaagaataattacataatttagtatgtttaaagagt 47937859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 40444447 - 40444533
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||| |||  ||||||||||||||||||||||||| |  |||||||  |||||   |||||||| |||||||||||| ||||||    
T  40444447 tttttatagaaatttgtgtatttaatgtattgaaaattggagtatttaac-attttattaaataattttttaatttagaatccttaaa 40444533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 354
Target Start/End: Complemental strand, 54016131 - 54016028
Alignment:
Q  253 ttaaatagtaactttt-tataaaaacatgtgtatttaatgtattgaaaattgaacaatttaactt-ttttaaagaataatttcttaatttagaatgctta 350  Q
    ||||| ||||| |||| ||||||||  ||| || ||||||||||||||||| ||  ||||||||| ||||||  ||||||||||||||||  |||| |||    
T  54016131 ttaaacagtaatttttatataaaaatttgtataattaatgtattgaaaattaaaatatttaactttttttaataaataatttcttaatttgaaatgttta 54016032  T
Q  351 aaga 354  Q
    ||||    
T  54016031 aaga 54016028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 5839623 - 5839557
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaa 322  Q
    |||||||  ||||||| ||||  ||||||||||||||||||||| |||||  |||||| ||||||||    
T  5839623 aatagtatgtttttatgaaaatttgtgtatttaatgtattgaaatttgaaacatttaaattttttaa 5839557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 357
Target Start/End: Original strand, 8607676 - 8607718
Alignment:
Q  315 ttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||    
T  8607676 ttttttaaagaataatttctttattaagaatgtttaaagagtg 8607718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 359
Target Start/End: Complemental strand, 19652728 - 19652626
Alignment:
Q  257 atagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||| ||||||| ||||  |||| ||| |||| |||| ||||| ||| |||  || |||| || ||||||| |||||||||||||  ||||||||||    
T  19652728 atagtaagtttttatgaaaatttgtgcattcaatgcattggaaattaaactattatacattttcaatgaataatatcttaatttagaaaccttaaagagt 19652629  T
Q  357 gct 359  Q
    |||    
T  19652628 gct 19652626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 21687592 - 21687698
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaa-tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    |||||| ||||||||||||||||   |||||| | || || ||||||||||||||| ||| |  || ||||||||  ||| ||||| |||||| ||||||    
T  21687592 ttaaatggtaactttttataaaagtttgtgtaataaagtgcattgaaaattgaacactttgatattattaaagaaatattacttaacttagaaagcttaa 21687691  T
Q  352 agagtgc 358  Q
    |||||||    
T  21687692 agagtgc 21687698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 22811268 - 22811298
Alignment:
Q  8 caccagagaaacaccaaatcacaccaaacaa 38  Q
    |||||||||||||||||||||||||||||||    
T  22811268 caccagagaaacaccaaatcacaccaaacaa 22811298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 335
Target Start/End: Original strand, 25751708 - 25751790
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttctt 335  Q
    ||||||||||| ||||||| ||| | | || | |||||| |||||||||| ||   ||| |||||||||||||||||||||||    
T  25751708 ttaaatagtaagtttttattaaagcttatgcaattaatgcattgaaaattaaattttttgacttttttaaagaataatttctt 25751790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 31262951 - 31262910
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||| ||||||| ||||||||||||||||||||||||||    
T  31262951 tttttaaa-aataattacttaatttagaatgcttaaagagtgc 31262910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 46521547 - 46521497
Alignment:
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    |||||||||||||||||||||||| || |||  |||| |||||||||||||    
T  46521547 tttaacttttttaaagaataatttatttattaggaatccttaaagagtgct 46521497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 51106020 - 51105918
Alignment:
Q  254 taaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaag 353  Q
    |||||||||||| ||||| |||| ||| ||| |   ||||||||||||| ||  |||| ||||||||||| |||||||  ||| ||||||||  ||||||    
T  51106020 taaatagtaactatttatgaaaatatgcgtaatccgtgtattgaaaattaaaatatttgacttttttaaataataattgtttattttagaatatttaaag 51105921  T
Q  354 agt 356  Q
    |||    
T  51105920 agt 51105918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 4850688 - 4850631
Alignment:
Q  294 ttgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    ||||||||| ||  |||| |||||||||| |||||||||||||||||| ||| |||||    
T  4850688 ttgaaaattaaagtattttacttttttaaggaataatttcttaatttaaaattcttaa 4850631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 12618756 - 12618805
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||| ||||||| ||| |||||||||| ||||| ||||||||||||||||    
T  12618756 atttgactttttaaaaaaataatttctaaatttggaatgcttaaagagtg 12618805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 18939919 - 18939964
Alignment:
Q  297 aaaattgaacaatttaacttttttaaagaataatttcttaatttag 342  Q
    ||||||||| | ||||| ||||||||||||||||| ||||||||||    
T  18939919 aaaattgaaaattttaatttttttaaagaataattacttaatttag 18939964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 20262157 - 20262104
Alignment:
Q  297 aaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgctta 350  Q
    |||||||||  |||||||||||||||| |||||||| |||||||| ||| ||||    
T  20262157 aaaattgaaatatttaacttttttaaaaaataattttttaatttaaaattctta 20262104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 32284926 - 32284877
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||| ||||||| ||||||||||||||| || ||| |||||||||||    
T  32284926 atttaacatttttaatgaataatttcttaatgtaaaattcttaaagagtg 32284877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 357
Target Start/End: Original strand, 38682008 - 38682101
Alignment:
Q  265 tttttataaaaacatgtgtatttaa-tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||| | |||||| | || |||||||||||||||| | ||||||  ||||||||| ||||| ||||| ||| |||| ||||| ||||    
T  38682008 tttttataaaagcttgtgtaataaagtgtattgaaaattgaaaactttaacaattttaaagattaattacttaacttaaaatgtttaaaaagtg 38682101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 44690310 - 44690375
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||| |||  ||||||||||||||||  |||||| |||| ||||| ||| |||||||||||    
T  44690310 attgaaaatcgaaatatttaacttttttaaaagataattacttattttagtatgtttaaagagtgc 44690375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 46010627 - 46010676
Alignment:
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||||||||||||| ||||| ||| |||  |||||||||||    
T  46010627 tttaacttttttaaagaataattacttaacttaaaatatttaaagagtgc 46010676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 50086429 - 50086518
Alignment:
Q  267 tttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||| |||| ||||||||| |||| |||||||||  ||  |||| | |||||||||||||||||  ||| ||| ||||| |||||||||    
T  50086429 tttatgaaaatatgtgtattcaatgcattgaaaatcaaaatatttgatttttttaaagaataattgtttattttggaatgtttaaagagt 50086518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 4392056 - 4391968
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaattta-acttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||||  |||||| | | ||||||||||||||||   |||  || |||||||||||||||| || |||||||||| ||||||    
T  4392056 tttttataaaaatttgtgtaatcagtgtattgaaaattgaaattttttgacatttttaaagaataattactaaatttagaatacttaaa 4391968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 13585336 - 13585368
Alignment:
Q  325 aataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||| ||||||||||||||||||||||    
T  13585336 aataatttctaaatttagaatgcttaaagagtg 13585368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 20022331 - 20022271
Alignment:
Q  211 gggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttat 271  Q
    ||||||||||||||| || ||| ||| |||| |||||||  |||||||||||| |||||||    
T  20022331 gggaaatgttaacgagtgcccctggggcactggttaaggaccttaaatagtaattttttat 20022271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 47247814 - 47247878
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||||||||||  || |||| |||||||  ||||||| |||| |||| ||||||||||    
T  47247814 aatgtattgaaaattgaaacatataacatttttaataaataattgcttattttataatgcttaaa 47247878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 53375095 - 53375051
Alignment:
Q  205 aatttagggaaatgttaacgattggccccgggacacttgttaagg 249  Q
    ||||||||||||||||||| | || ||||||| ||||||||||||    
T  53375095 aatttagggaaatgttaacaagtgcccccggggcacttgttaagg 53375051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 5e-41; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 210 - 354
Target Start/End: Complemental strand, 34681835 - 34681690
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaa-ggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaa 308  Q
    |||||||||||||||| || ||||||| |||| ||||| || ||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |    
T  34681835 agggaaatgttaacgagtgcccccggggcactggttaacgggtcttaaatagtaactttttataaaaacttgtgtatttaatgcattggaaattgaacta 34681736  T
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||| |||||| |||| ||||||||| ||||||||||||||||||||    
T  34681735 tttgacttttgtaaaaaataatttcctaatttagaatgcttaaaga 34681690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 216 - 358
Target Start/End: Complemental strand, 18926462 - 18926321
Alignment:
Q  216 atgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaact 315  Q
    ||||||||||||| ||||||  ||||| |||||| || ||||| |||||||||||| ||||  |||||||| |||| |||||||||||||| |||| ||     
T  18926462 atgttaacgattg-ccccggagcactttttaagggtcataaatggtaactttttatgaaaagttgtgtattcaatgcattgaaaattgaactatttcacc 18926364  T
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||||||||| | ||||| ||||||||||||||||    
T  18926363 tttttaaagaataatttcatgatttaaaatgcttaaagagtgc 18926321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 22688960 - 22689057
Alignment:
Q  255 aaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||| ||||||| | ||| ||||||||||||| ||| |||||||||    || ||||||||||||||||| |||||||||||||||| |||||    
T  22688960 aaatagtaattttttatgacaacttgtgtatttaatgcattaaaaattgaattgattgacttttttaaagaataaattcttaatttagaatgtttaaa 22689057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 358
Target Start/End: Complemental strand, 35567201 - 35567108
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||| ||||||||||||||||||| ||||| ||  |||| ||||||||||| ||||||||  ||||||  |||||| |||||||||    
T  35567201 tttttataaaaatatgtgtatttaatgtattggaaattaaaatatttgacttttttaaaaaataattttctaatttgaaatgctaaaagagtgc 35567108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 19620101 - 19619993
Alignment:
Q  243 gttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttag 342  Q
    |||||||  |||||||||||||||||||| ||||  ||| || | | || |||| |||||||| | ||| || |||||||||||||||||||||||||||    
T  19620101 gttaagggccttaaatagtaactttttatgaaaagttgtataatcagtgcattggaaattgaaaactttgacatttttaaagaataatttcttaatttag 19620002  T
Q  343 aatgcttaa 351  Q
     ||||||||    
T  19620001 catgcttaa 19619993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 358
Target Start/End: Complemental strand, 27338344 - 27338256
Alignment:
Q  270 ataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||  |||||||||||| ||||| |||||||||  ||| | ||||||||||||||||||  |||||||| |||||||||||||||    
T  27338344 ataaaaatttgtgtatttaatatattggaaattgaactgtttgatttttttaaagaataattttctaatttagcatgcttaaagagtgc 27338256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 33922782 - 33922846
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||    
T  33922782 aatgcattgaaaattgaactatttgacttttttaaagaataattttctaatttagaatgcttaaa 33922846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 35599817 - 35599912
Alignment:
Q  261 taactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||||||| ||||  | |||||| |||| ||||||| |||||| |||| | ||||||||||||||||||| |||||||| ||| |||||||||    
T  35599817 taactttttatgaaaagttatgtattcaatgcattgaaatttgaactatttgaattttttaaagaataatttcctaatttagtatgtttaaagagt 35599912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 265 - 357
Target Start/End: Complemental strand, 43996441 - 43996348
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaaca-atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||  | || |||||||| ||||||||||||||  ||||||||| |||||||||||||||  ||| |||| ||||||||||||||    
T  43996441 tttttataaaaatttatgcatttaatgcattgaaaattgaacttatttaacttgtttaaagaataattttctaacttagtatgcttaaagagtg 43996348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 34593373 - 34593417
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtatt 295  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  34593373 tcttaaagagtaactttttataaaaacatgtgtatttaatgtatt 34593417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 31498671 - 31498741
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||||||||| | |||||| |||| ||| |||| || |||||||||||||| |||||||||||    
T  31498671 aatgtattgaaaattgaaaactttaacattttaaaaaaatatttacttaatttagaatgtttaaagagtgc 31498741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 31902756 - 31902861
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||| |||||||  |||  |||||| | ||||||||||||||||||  |||| ||||| |||| ||||||||||||| |||  | ||||||||    
T  31902756 ttaaatagtaaatttttatggaaaattgtgtagtcaatgtattgaaaattgaaatatttgactttcttaaggaataatttcttattttgaattgcttaaa 31902855  T
Q  353 gagtgc 358  Q
     |||||    
T  31902856 aagtgc 31902861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 33887894 - 33887963
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||| |||||||||||||  |||| |||||||||||||||||||  ||| ||| ||||||||||||||||    
T  33887894 aatgcattgaaaattgaaatatttgacttttttaaagaataattatttattttggaatgcttaaagagtg 33887963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 40722458 - 40722353
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||| |||||||   ||  |||||| |||||| |||||||||||||  |||| ||||| ||||||||||| |||||| || ||| ||||||||    
T  40722458 ttaaatagtaagtttttatggtaatttgtgtaattaatgcattgaaaattgaaatatttgactttcttaaagaataaattcttatttcagattgcttaaa 40722359  T
Q  353 gagtgc 358  Q
     |||||    
T  40722358 aagtgc 40722353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 45869129 - 45869032
Alignment:
Q  255 aaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||| | ||| |||||| |  |||||||||||||||||||| | ||  |||| ||||||||||||||||||| ||| ||| ||||| ||||||    
T  45869129 aaatagtaaatatttttaaaaatagatgtatttaatgtattgaaaactaaaatatttgacttttttaaagaataattacttgattaagaatccttaaa 45869032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 6392217 - 6392177
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  6392217 ttttgaaagaataatttcttaatttagaatgcttaaagagt 6392177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 9031767 - 9031703
Alignment:
Q  281 tgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaat 345  Q
    ||||||||||| |||||||||||||  ||| |||||||| || ||||||||| ||||||||||||    
T  9031767 tgtatttaatgcattgaaaattgaagtattcaactttttaaatgaataattttttaatttagaat 9031703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 34299727 - 34299855
Alignment:
Q  230 ccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataa 329  Q
    ||||||| || | |||||||  |||||||||||||||||||| |||   |||||| | | ||  ||| |||||||| | ||| || ||||||||||||||    
T  34299727 ccccggggcattggttaaggaccttaaatagtaactttttatgaaagtttgtgtaatcagtgctttgtaaattgaaaactttgacatttttaaagaataa 34299826  T
Q  330 tttcttaatttagaatgcttaaagagtgc 358  Q
    || |||||| ||| ||||||||| |||||    
T  34299827 ttgcttaatctagcatgcttaaaaagtgc 34299855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 211 - 358
Target Start/End: Original strand, 43492166 - 43492314
Alignment:
Q  211 gggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaa-tgtattgaaaattgaacaat 309  Q
    ||||||||||||| | || | ||||| ||||  ||||||   |||||| |||||||||||| |||   |||||| | || || |||| |||||| | | |    
T  43492166 gggaaatgttaactagtgcctccggggcactgattaagggatttaaatggtaactttttattaaagtttgtgtaataaagtgcattggaaattgtaaatt 43492265  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    || || ||| |||||||||||| ||||||||||||||||||||||||||    
T  43492266 ttgacatttctaaagaataattacttaatttagaatgcttaaagagtgc 43492314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 46716266 - 46716166
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgctttgga 364  Q
    |||||||||||   ||| || |||||| |||||| |||||| | ||| |  ||||||||||||||||  ||||||||||||| ||||||||||| |||||    
T  46716266 tttttataaaagtttgtataattaatgcattgaacattgaaaactttgatatttttaaagaataattatttaatttagaatggttaaagagtgcattgga 46716167  T
Q  365 g 365  Q
    |    
T  46716166 g 46716166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 6387993 - 6388064
Alignment:
Q  286 ttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||| ||||||||   ||| ||||||||||||||||||||||| |||  |||| |||||||||||    
T  6387993 ttaatgtattggaaattgaagtttttgacttttttaaagaataatttctttattatgaatccttaaagagtg 6388064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 37129847 - 37129902
Alignment:
Q  281 tgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttctta 336  Q
    |||| ||||||| ||| ||||||||  |||||||||||||||||||||||||||||    
T  37129847 tgtaattaatgtcttgtaaattgaaatatttaacttttttaaagaataatttctta 37129902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 357
Target Start/End: Complemental strand, 1360621 - 1360531
Alignment:
Q  267 tttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||  |||||| | |||| |||| |||| |||  |||||||||||||||| ||||||| || | ||| ||||||||||||||||    
T  1360621 tttataaaaaagtgtgtaatcaatgcattggaaatcgaaacatttaacttttttaaaaaataattactaattttggaatgcttaaagagtg 1360531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 26402824 - 26402894
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||||||||   ||| |||||||||| |||||||||||| |||  |||| ||||||||||||    
T  26402824 aatgtattgaaaattgaagtttttgacttttttaaggaataatttctttattaggaatccttaaagagtgc 26402894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 352
Target Start/End: Complemental strand, 8238059 - 8237950
Alignment:
Q  243 gttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttag 342  Q
    |||||||  ||||||| |||||||||||| |||   |||||| | | || |||||||| |||| | ||| || |||||||||||||||| ||||||||||    
T  8238059 gttaaggaccttaaatggtaactttttatgaaagtttgtgtaatcagtgcattgaaaaatgaaaactttgacatttttaaagaataattacttaatttag 8237960  T
Q  343 aatgcttaaa 352  Q
     || ||||||    
T  8237959 tatacttaaa 8237950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 35875136 - 35875079
Alignment:
Q  301 ttgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||| |||||||||||||||  ||||||||  ||||||| ||||||||||||||||    
T  35875136 ttgaactatttaacttttttaattaataattttctaatttataatgcttaaagagtgc 35875079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 358
Target Start/End: Complemental strand, 36973455 - 36973330
Alignment:
Q  235 ggacacttgttaaggttcttaaatagtaacttttt-ataaaaacatgtgtatttaatgtattgaaaattgaacaatttaactttttt-aaagaataattt 332  Q
    |||||||  |||||| | ||||||||||| ||||| || ||||  ||| |||||| || |||| ||||||||  |||| | |||||| ||||||||| ||    
T  36973455 ggacactctttaagggttttaaatagtaatttttttatgaaaatttgtatatttattgcattggaaattgaattatttgattttttttaaagaataactt 36973356  T
Q  333 cttaatttagaatgcttaaagagtgc 358  Q
    | |||||| |||||||||||||||||    
T  36973355 cctaatttggaatgcttaaagagtgc 36973330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 10419974 - 10419926
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaa 299  Q
    ||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  10419974 tcttaaatgatatctttttataaaaacatgtgtattcaatgtattgaaa 10419926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 352
Target Start/End: Original strand, 24299137 - 24299237
Alignment:
Q  252 cttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    |||||||| ||||||||||| ||||  ||| || | | || |||| ||||| || ||||| || ||||||| ||||||||||||||||||  ||||||||    
T  24299137 cttaaataataactttttatgaaaagttgtataatcagtgcattggaaattaaaaaatttgacatttttaaggaataatttcttaatttaacatgcttaa 24299236  T
Q  352 a 352  Q
    |    
T  24299237 a 24299237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 3267574 - 3267721
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaat 309  Q
    |||||||||||||| | || ||  ||| |||| |||||||  || |||||| || |||||||||||   |||||| | | || ||||||||| ||| | |    
T  3267574 agggaaatgttaaccagtgtcctaggggcactggttaaggacctaaaatagcaagtttttataaaagtttgtgtaatgagtgcattgaaaatggaaaact 3267673  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    || |  |||| ||||||||||| ||| |||||| ||||||||||||||    
T  3267674 tttaaattttaaaagaataattactttatttagcatgcttaaagagtg 3267721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 357
Target Start/End: Original strand, 30626116 - 30626183
Alignment:
Q  290 tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||| ||||||||  | |||| |||||| ||||||||||| || ||| |||||||||||||||||    
T  30626116 tgtattggaaattgaagtacttaattttttttaagaataatttattcattaagaatgcttaaagagtg 30626183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 357
Target Start/End: Original strand, 34398095 - 34398186
Alignment:
Q  266 ttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||||  ||||| || |||| |||||||||||||  |||| || |||||||| |||||| |||| ||||| |||  ||||||||||    
T  34398095 ttttataaaaatttgtgttttcaatgcattgaaaattgaagtatttgacctttttaaaaaataatatcttgatttaaaatttttaaagagtg 34398186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 41431142 - 41431201
Alignment:
Q  298 aaattgaacaatttaacttttttaaagaa-taatttcttaatttagaatgcttaaagagt 356  Q
    ||||||||  |||||| ||||||||| || ||||||||||||||| ||||||||||||||    
T  41431142 aaattgaaatatttaatttttttaaaaaaataatttcttaatttaaaatgcttaaagagt 41431201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 345
Target Start/End: Complemental strand, 2964158 - 2964056
Alignment:
Q  243 gttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttag 342  Q
    ||||||||| | |||||||||||| | ||||||| ||||||| | ||||||| ||||||  ||   ||||| ||||||| | |||||||||||  |||||    
T  2964158 gttaaggttttcaaatagtaacttatcataaaaatatgtgtaatcaatgtatcgaaaatcaaaatttttaatttttttataaaataatttcttcttttag 2964059  T
Q  343 aat 345  Q
    |||    
T  2964058 aat 2964056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 357
Target Start/End: Original strand, 676395 - 676483
Alignment:
Q  268 ttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||| ||||||| | |||| ||| ||||| |||  ||||||| |||||||  ||||||| |||| ||||||||| ||||||||||    
T  676395 ttataaaaatatgtgtaatcaatgcatttaaaatcgaaatatttaac-tttttaataaataattacttattttagaatgtttaaagagtg 676483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 5248696 - 5248745
Alignment:
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||| |||||||||||||||||||| |||  |||| ||||||||||||    
T  5248696 tttaacatttttaaagaataatttctttattaggaatccttaaagagtgc 5248745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Complemental strand, 5907851 - 5907818
Alignment:
Q  325 aataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||| ||||||||||||||||||||||||||    
T  5907851 aataattacttaatttagaatgcttaaagagtgc 5907818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 17255447 - 17255382
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaa 275  Q
    |||||||||||||| | || ||| | | ||||||||||||  |||||||||||| |||||||||||    
T  17255447 agggaaatgttaactagtgcccctgaggcacttgttaaggaccttaaatagtaattttttataaaa 17255382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 19914947 - 19915048
Alignment:
Q  258 tagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||| ||||||| || |  |||| ||||| ||||||||||||||||   |||| |||||||||| |||||||| || ||   || |||||||||||||    
T  19914947 tagtaagtttttatgaatatttgtgcatttattgtattgaaaattgaaatttttatcttttttaaataataattttttcataaggagtgcttaaagagtg 19915046  T
Q  358 ct 359  Q
    ||    
T  19915047 ct 19915048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 23187248 - 23187313
Alignment:
Q  298 aaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgctttgg 363  Q
    ||||||||  |||||| ||| ||||||| ||||| |||| |||| |||||||||||||||| ||||    
T  23187248 aaattgaaatatttaattttattaaagagtaattgcttattttaaaatgcttaaagagtgcattgg 23187313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 24324907 - 24324940
Alignment:
Q  8 caccagagaaacaccaaatcacaccaaacaagat 41  Q
    ||||| ||||||||||||||||||||||||||||    
T  24324907 caccaaagaaacaccaaatcacaccaaacaagat 24324940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 356
Target Start/End: Complemental strand, 25886243 - 25886166
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||||| |||||||||||||||| |  | || ||||| | | |||||||||||| |||||| |||| |||||||||    
T  25886243 tgtgtattaaatgtattgaaaattgtaatagttgactttctaagagaataatttctaaatttaaaatgtttaaagagt 25886166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 37138683 - 37138716
Alignment:
Q  308 atttaacttttttaaagaataatttcttaattta 341  Q
    |||||||||||||||| |||||||||||||||||    
T  37138683 atttaacttttttaaaaaataatttcttaattta 37138716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 44452112 - 44452153
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||| ||||||| |||||||||||||| ||||||||||    
T  44452112 tttttaaataataattacttaatttagaatgtttaaagagtg 44452153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 9719069 - 9719101
Alignment:
Q  325 aataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||| ||||||||||||||||||||||    
T  9719069 aataatttctaaatttagaatgcttaaagagtg 9719101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 28324104 - 28324168
Alignment:
Q  255 aaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttt 319  Q
    |||||||||  |||||||||||  |||| |||||||| |||||||||||||   |||||||||||    
T  28324104 aaatagtaagattttataaaaatgtgtgcatttaatgcattgaaaattgaattgtttaacttttt 28324168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 352
Target Start/End: Complemental strand, 39241606 - 39241570
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  39241606 tttttaaagaataattgcttaatttataatgcttaaa 39241570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 358
Target Start/End: Original strand, 47754471 - 47754619
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaat 309  Q
    |||||||||||||||| || ||| ||| ||||  |||||    ||||||||||| ||||||| | ||    ||||||||||| |||| ||| ||||  |     
T  47754471 agggaaatgttaacgagtgcccctggggcactctttaagacctttaaatagtaaatttttatgagaattattgtatttaatgcattggaaaatgaaacaa 47754570  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||| || |||  | |||||||||| | ||||||||||||||||||||    
T  47754571 ttaaccttattagtggataatttcttgaattagaatgcttaaagagtgc 47754619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 235 - 357
Target Start/End: Complemental strand, 44442367 - 44442245
Alignment:
Q  235 ggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttct 334  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||     
T  44442367 ggacacttgttaatggtcttaaatagtaactttttataaaaatatgtgtatttaatgtattgaaaattgaaatatttgacttttttaaagaataatttcc 44442268  T
Q  335 taatttagaatgcttaaagagtg 357  Q
    ||||||| ||| |||||| ||||    
T  44442267 taatttaaaatacttaaaaagtg 44442245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 5423751 - 5423859
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgctta 350  Q
    |||||||| |||| ||||||| ||||| | ||||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||||| ||||||||    
T  5423751 tcttaaatggtaattttttatgaaaacttatgtatttaatgcattgaaaattgaactatttaacttttttaaagaataattttctaatttaaaatgctta 5423850  T
Q  351 aagagtgct 359  Q
    |||| ||||    
T  5423851 aagaatgct 5423859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 356
Target Start/End: Original strand, 46592479 - 46592579
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    |||||||||||||||| ||||| ||| |||||||| ||||| ||||| |||  ||| ||||||||||||||||| ||| |||||||| ||||||||||||    
T  46592479 aatagtaactttttatgaaaacttgtctatttaatatattggaaattaaactgtttgacttttttaaagaataacttcctaatttagcatgcttaaagag 46592578  T
Q  356 t 356  Q
    |    
T  46592579 t 46592579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 358
Target Start/End: Complemental strand, 40053393 - 40053287
Alignment:
Q  252 cttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    |||||||||||||||||||| |||   |||||| | |||||||||||||||||| | ||| || ||||||||||| |||| | |||||||||||||||||    
T  40053393 cttaaatagtaactttttatgaaagtttgtgtaataaatgtattgaaaattgaaaactttgacatttttaaagaacaattacctaatttagaatgcttaa 40053294  T
Q  352 agagtgc 358  Q
    | |||||    
T  40053293 aaagtgc 40053287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 236 - 358
Target Start/End: Original strand, 26857181 - 26857303
Alignment:
Q  236 gacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttctt 335  Q
    ||||||| |||||| ||||||||||||| ||||||| | |   ||| |||| |||| |||||||||| ||| |||||||||||||||||||||||||  |    
T  26857181 gacactttttaagggtcttaaatagtaattttttatgagattttgtatattcaatgcattgaaaattaaactatttaacttttttaaagaataattttct 26857280  T
Q  336 aatttagaatgcttaaagagtgc 358  Q
    ||||||  ||| |||||| ||||    
T  26857281 aatttacgatgtttaaagggtgc 26857303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 368
Target Start/End: Original strand, 5250910 - 5251023
Alignment:
Q  255 aaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||| ||| ||||||| ||||  ||||||||||||  |||||||||| |||  ||| ||||||||||||||||| ||| |||||||| ||| |||||||    
T  5250910 aaataataattttttatgaaaatttgtgtatttaatacattgaaaattaaactgtttgacttttttaaagaataacttcctaatttagtatgtttaaaga 5251009  T
Q  355 gtgctttggaggca 368  Q
    |||||  |||||||    
T  5251010 gtgctccggaggca 5251023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 358
Target Start/End: Original strand, 1048670 - 1048781
Alignment:
Q  246 aaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaat 345  Q
    |||| ||||||||| || |||||||| ||||  | || ||| || | |||||||||||||| ||||||||||| ||||||||||||| ||||||| | ||    
T  1048670 aagggtcttaaataatatctttttatgaaaaattatgcattcaacgcattgaaaattgaactatttaactttt-taaagaataattttttaatttggtat 1048768  T
Q  346 gcttaaagagtgc 358  Q
    |||||||||||||    
T  1048769 gcttaaagagtgc 1048781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 10650457 - 10650382
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    |||||||||| ||||||| ||||||||||||||||||||||| || | |||||| ||||||||||||  |||||||    
T  10650457 tgtgtatttagtgtattggaaattgaacaatttaactttttttaaaattaattttttaatttagaatatttaaaga 10650382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 1601020 - 1600942
Alignment:
Q  281 tgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    ||||||||||| |||  ||||||||| ||||||| |||||||||||||||||  |||||||||||||||| || |||||    
T  1601020 tgtatttaatgcatttgaaattgaactatttaacatttttaaagaataattttgtaatttagaatgcttatagcgtgct 1600942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 39973956 - 39973886
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||| ||||||||||||| | |||||| |||| ||||||||||| |||||||||| |||||||||||||||    
T  39973956 aatgcattgaaaattgaaaactttaacattttaaaagaataattacttaatttagcatgcttaaagagtgc 39973886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 3047968 - 3047861
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgctta 350  Q
    ||||||||||||| ||||||| |||   ||| || | |||| |||| |||| ||| ||||| || ||||||||||| |||| |||||||||| |||||||    
T  3047968 tcttaaatagtaattttttatgaaagtttgtttaatcaatgcattggaaatcgaaaaatttgacatttttaaagaacaattacttaatttagcatgctta 3047869  T
Q  351 aagagtgc 358  Q
    ||||||||    
T  3047868 aagagtgc 3047861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 31043074 - 31042999
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    |||||| | |||| ||||||||||||| | ||| || |||||||| ||||||| ||||||||||||||||||||||    
T  31043074 tgtgtaatcaatgcattgaaaattgaaaactttgacatttttaaaaaataattacttaatttagaatgcttaaaga 31042999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 356
Target Start/End: Original strand, 33791746 - 33791849
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||||||||||| |||   |||||| |   ||||||| |||||||| ||||| || |||| ||||||||||| |||||||||| || ||||||    
T  33791746 ttaaatagtaactttttatgaaagtttgtgtaatcggtgtattggaaattgaaaaatttgacattttaaaagaataattacttaatttagcatacttaaa 33791845  T
Q  353 gagt 356  Q
    ||||    
T  33791846 gagt 33791849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 5417780 - 5417703
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||||||||||||||| |  |||| | |||||| | |||||||||||||||||||||| |||||| ||||    
T  5417780 tgtgtatttaatgtattgaaaattgtaatatttta-ttttttgatgaataatttcttaatttagaatccttaaaaagtg 5417703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 6983032 - 6983102
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||| |||||||||||||  |||| ||| |||||| ||||||||||||||||| |||| ||||||||||||    
T  6983032 aatgcattgaaaattgaaatatttgactcttttaatgaataatttcttaatttggaatacttaaagagtgc 6983102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 339
Target Start/End: Complemental strand, 14758709 - 14758572
Alignment:
Q  202 tttaatttagggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaat 301  Q
    |||||| ||||||||||||||||| ||  |   |||||||  ||||||   ||||||||||| ||||||| ||||  |||| ||| |||| || ||||||    
T  14758709 tttaatatagggaaatgttaacgagtgctctaaggacactctttaaggactttaaatagtaaatttttatgaaaaattgtgcattcaatgcatcgaaaat 14758610  T
Q  302 tgaacaatttaacttttttaaagaataatttcttaatt 339  Q
    ||||   || ||||||||||| ||||||||||||||||    
T  14758609 tgaaatgttaaacttttttaaggaataatttcttaatt 14758572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 341
Target Start/End: Original strand, 32787262 - 32787351
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgt-atttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaattta 341  Q
    ||||||||||||||||||||||||  ||||| ||  ||||||||   ||||||||| |||||| |||||||||| ||||| |||||||||    
T  32787262 ttaaatagtaactttttataaaaatttgtgtaataaaatgtattaggaattgaacactttaacatttttaaagattaattacttaattta 32787351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 42573816 - 42573881
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||| |  ||||| |||| ||||||||||| |||||||||| |||||||||||||||    
T  42573816 attgaaaattgaaaaccttaacattttaaaagaataattacttaatttagcatgcttaaagagtgc 42573881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 354
Target Start/End: Complemental strand, 48947303 - 48947202
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||| |||||||||||| ||||  |||||| | | || |||| |||||||| | ||| || |||||||| ||||||| |||||||||| |||||||||    
T  48947303 ttaaatggtaactttttatgaaaatttgtgtaatcagtgcattggaaattgaaaactttgacatttttaaaaaataattacttaatttagtatgcttaaa 48947204  T
Q  353 ga 354  Q
    ||    
T  48947203 ga 48947202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 356
Target Start/End: Original strand, 10370410 - 10370494
Alignment:
Q  272 aaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||| || |||||||||| | ||  ||||||||  |||||||||||||||| ||||||||| ||||||| ||| ||||||||||    
T  10370410 aaaaatatatgtatttaatattttagaaattgaattatttaacttttttaaaaaataatttcataatttaaaatacttaaagagt 10370494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 34861256 - 34861324
Alignment:
Q  290 tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||| ||||||||   ||| || |||||||| ||||||| ||||||||||||||||||||||||||    
T  34861256 tgtattggaaattgaaatgtttgacatttttaaaaaataattacttaatttagaatgcttaaagagtgc 34861324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 357
Target Start/End: Original strand, 44584061 - 44584161
Alignment:
Q  257 atagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||| ||||||| ||||| |||| |||||||  |||||||||||||  |||  ||||||| ||  |||| |||||||||||||| | ||||||||||    
T  44584061 atagtaagtttttatgaaaacttgtgcatttaatacattgaaaattgaaacattagactttttcaacaaatagtttcttaatttagattccttaaagagt 44584160  T
Q  357 g 357  Q
    |    
T  44584161 g 44584161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 42787820 - 42787757
Alignment:
Q  294 ttgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||| |||||| ||||||||  ||||||||| ||||||||||| |||||| ||||    
T  42787820 ttgaaaattgaactatttaatttttttaataaataatttcctaatttagaatacttaaaaagtg 42787757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 45359284 - 45359339
Alignment:
Q  283 tatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaat 338  Q
    |||| |||| |||||||||||||| |||||||||||||||| || |||||||||||    
T  45359284 tattcaatgcattgaaaattgaactatttaacttttttaaataacaatttcttaat 45359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 31807827 - 31807893
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    ||||||||||||| | | | || |||||||||||||||| |||| ||||||||||||||| ||||||    
T  31807827 attgaaaattgaaaactatcacatttttaaagaataattacttattttagaatgcttaaatagtgct 31807893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 35259093 - 35259158
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||| |||||||| | ||| || |||||||| |||||||||||||||||| || ||||||||||||    
T  35259093 attggaaattgaaaacttttacatttttaaaaaataatttcttaatttagcatacttaaagagtgc 35259158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 354
Target Start/End: Original strand, 38978097 - 38978158
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    |||||||||| |||  ||||| ||||||||||||||||||||| |||  |||||||||||||    
T  38978097 attgaaaatttaactctttaaattttttaaagaataatttcttcattatgaatgcttaaaga 38978158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 40203061 - 40203190
Alignment:
Q  229 gccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaata 328  Q
    |||||||||||||  |||||||  |||||| |||||||| | | |||| ||||||| | |||| |||| ||||||||  |||| |||||||||   ||||    
T  40203061 gccccgggacactctttaaggtctttaaatggtaactttgtctgaaaatatgtgtaatcaatgcattggaaattgaaatatttgacttttttatgaaata 40203160  T
Q  329 atttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||  |||  ||| ||||||||||||    
T  40203161 atttcttgttttgtaatccttaaagagtgc 40203190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 359
Target Start/End: Original strand, 33744156 - 33744248
Alignment:
Q  267 tttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    ||||| |||| || |||| | |||| ||||||||| |||  |||| ||||||| ||| ||||||| |||| |||| |||||||||||||||||    
T  33744156 tttatgaaaaaatatgtaatcaatgcattgaaaatcgaaatatttgactttttaaaaaaataattacttattttaaaatgcttaaagagtgct 33744248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 356
Target Start/End: Original strand, 48022359 - 48022463
Alignment:
Q  253 ttaaatagtaacttttta-taaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    ||||||||||| |||||| |||||| || |||||| |||| ||||||||||| |  | |||||||||| ||| ||||||| || ||| | | ||||||||    
T  48022359 ttaaatagtaagtttttaataaaaaaatatgtattgaatgcattgaaaattgcaatagttaactttttaaaacaataattactaaatatgggatgcttaa 48022458  T
Q  352 agagt 356  Q
    |||||    
T  48022459 agagt 48022463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 4521029 - 4521120
Alignment:
Q  267 tttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||| |  |||| | |||| |||| ||||||||   ||||||||||||||||||||||  |||  ||||| |||||||||||||||    
T  4521029 tttataaaaatacatgtaatcaatgcattggaaattgaaatgtttaacttttttaaagaataatcgcttgttttagtatgcttaaagagtgc 4521120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 358
Target Start/End: Original strand, 5115639 - 5115718
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||| |||||| |||| ||||||||  |||||||||||||| |  ||||||| ||  |||||||| ||||||||||||    
T  5115639 tgtgtaattaatgcattggaaattgaaatatttaacttttttataacataatttattcttttagaatccttaaagagtgc 5115718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 357
Target Start/End: Complemental strand, 26687632 - 26687533
Alignment:
Q  259 agtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaaga-ataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||| ||||| ||||  |||||| |||||| ||||||||| |||  |||| |||||||| || | || ||| |||| ||||||||||||||||||||    
T  26687632 agtaactatttatgaaaaagtgtgtaattaatgcattgaaaatcgaaatatttgactttttttaaaagattattgcttattttagaatgcttaaagagtg 26687533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 356
Target Start/End: Complemental strand, 4041034 - 4040889
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaat 309  Q
    |||||||||||||||| || || ||||||||| |||||||   ||||||  ||||||||| | |||   |||||| | | | |||||||||||||| | |    
T  4041034 agggaaatgttaacgagtg-cctcgggacactagttaaggactttaaatgataactttttgtgaaagtttgtgtaataagtatattgaaaattgaaaact 4040936  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    || ||  |||||   ||||||| ||||||||| ||||||||||||||    
T  4040935 ttgacacttttatgtaataattacttaatttaaaatgcttaaagagt 4040889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 27934773 - 27934839
Alignment:
Q  290 tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||||||||||||   ||| |  |||||||| |||||||  |||||||||||||||||||||||    
T  27934773 tgtattgaaaattgaaacttttgatatttttaaataataattatttaatttagaatgcttaaagagt 27934839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 37037727 - 37037645
Alignment:
Q  272 aaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||| ||||||| | ||||||||| ||||||||  ||||||||||||| || ||||||| ||   |||| ||||||||||||    
T  37037727 aaaaaaatgtgtaatcaatgtattggaaattgaaacatttaactttttttaaaaataattactatttttaaaatgcttaaaga 37037645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 303
Target Start/End: Complemental strand, 39546961 - 39546923
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattg 303  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  39546961 tttttataaaaatatgtgtatttattgtattgaaaattg 39546923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 39912251 - 39912321
Alignment:
Q  287 taatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||| |||| |||||||||   ||| ||||||||||| ||||| ||| |||||||| ||||||||||||||    
T  39912251 taatatattaaaaattgaattgtttgacttttttaaataataacttcctaatttagcatgcttaaagagtg 39912321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 356
Target Start/End: Complemental strand, 2633124 - 2633027
Alignment:
Q  259 agtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||| ||||| ||||  ||| || | ||| ||||| |||| |||  |||||||||||||||| ||| ||| |||| ||||||||| |||||||||    
T  2633124 agtaactatttatgaaaaagtgtataatcaatatattggaaatcgaaacatttaacttttttaaaaaattattgcttattttagaatgtttaaagagt 2633027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 3755999 - 3756036
Alignment:
Q  317 ttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  3755999 ttttaaagaataatttcttattttagaatgtttaaaga 3756036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 6282425 - 6282360
Alignment:
Q  292 tattgaaaattgaacaatttaacttttttaaa-gaataatttcttaatttagaatgcttaaagagt 356  Q
    |||| |||||||||  |||||||||||||||| || ||||||||||||||| |||  |||||||||    
T  6282425 tatttaaaattgaagcatttaacttttttaaaagattaatttcttaatttaaaatatttaaagagt 6282360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 36621977 - 36621928
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||||||||||||||||| |||| |||  |||| ||||||||||    
T  36621977 atttaacttttttaaagaataattgcttattttgaaatgtttaaagagtg 36621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 37976864 - 37976823
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||    
T  37976864 tttttaaagtataattttttattttagaatgcttaaagagtg 37976823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 38294108 - 38294015
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaattta-acttttttaaagaataatttcttaatttagaat 345  Q
    ||||||||||| |||||||| |||| |||| ||| |||| |||| ||||| ||  ||||| |||||||  | ||| ||||||||||||||||||    
T  38294108 ttaaatagtaagtttttatagaaacttgtgcattcaatgcattggaaattaaaatatttatactttttctatgaacaatttcttaatttagaat 38294015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 48933 - 48997
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||| | ||| || ||||| |||||||||| |||||||||| ||| |||| |||||    
T  48933 attgaaaattgaaaacttttacatttttcaagaataattacttaatttagcatgattaacgagtg 48997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 64888 - 64936
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||| ||||||||||||||||  ||| ||||||||| |||||||||    
T  64888 atttaacgtttttaaagaataattgtttattttagaatgtttaaagagt 64936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 2292352 - 2292300
Alignment:
Q  283 tatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttctt 335  Q
    |||||| || |||||||||||||| |||| ||||| ||||| |||||||||||    
T  2292352 tatttagtgcattgaaaattgaactatttgactttcttaaaaaataatttctt 2292300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 6285890 - 6285838
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgctt 360  Q
    |||| |||||||||||||||||||||||| |||| ||| |||||  |||||||    
T  6285890 atttgacttttttaaagaataatttcttattttaaaatccttaatcagtgctt 6285838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 352
Target Start/End: Original strand, 7481421 - 7481481
Alignment:
Q  293 attgaaaattgaacaatttaactttt-ttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||| |||  ||||||||||| ||||||||||||| |||| ||||| |||||||||    
T  7481421 attgaaaatcgaagtatttaactttttttaaagaataattgcttattttagcatgcttaaa 7481481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 9500883 - 9500987
Alignment:
Q  257 atagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||| ||||||||||||| ||||| |  ||   |||||||||||||  |||  ||||||| ||  |||| |||||||||||||| |  |||||||||    
T  9500883 atagtaaatttttataaaaacttgtgtttccaagtcattgaaaattgaagtattagactttttcaataaatagtttcttaatttagattcattaaagagt 9500982  T
Q  357 gcttt 361  Q
    |||||    
T  9500983 gcttt 9500987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 9931874 - 9931822
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaa 305  Q
    |||||| |||| |||||||||||   |||||| ||||||||||||||||||||    
T  9931874 ttaaatggtaattttttataaaagtttgtgtaattaatgtattgaaaattgaa 9931822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 44829364 - 44829272
Alignment:
Q  260 gtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||| |||| |||||||  |||||||| |||||||| ||||||| |  | || || |||||||||||||||| || ||||| | |||||||||    
T  44829364 gtaagttttaataaaaagttgtgtattgaatgtattaaaaattgtaatagttgacctttttaaagaataattactaaatttgggatgcttaaa 44829272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 46123956 - 46124008
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaa 305  Q
    |||||| ||||||||| |||||||  |||||| | ||||||||||||||||||    
T  46123956 ttaaatggtaacttttaataaaaaattgtgtaataaatgtattgaaaattgaa 46124008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 44195600 - 44195501
Alignment:
Q  259 agtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  44195600 agtaactttttataaaaacatgtgtatttaatgcattgtaaattgaattatttaacttttgtaaagaataatttcttaatttaaaatgcttaaagagtgc 44195501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 211 - 356
Target Start/End: Complemental strand, 33455109 - 33454964
Alignment:
Q  211 gggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatt 310  Q
    ||||||||||||| | ||  |||| |||||| ||||| |  |||||||||||||||||||| ||||  |||||| | ||||||||| |||||||| | ||    
T  33455109 gggaaatgttaactagtgcacccgagacactggttaaaggacttaaatagtaactttttatgaaaagttgtgtaatcaatgtattgtaaattgaaaactt 33455010  T
Q  311 taacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    | || ||||||||||||| ||||||||||||| |||||||||||||    
T  33455009 tgacatttttaaagaatagtttcttaatttagcatgcttaaagagt 33454964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 36480617 - 36480514
Alignment:
Q  232 ccgggacacttgttaaggttcttaaatag---taactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaata 328  Q
    |||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||||| || ||||    
T  36480617 ccgggacacttgttaagggtcttaaataggagtaactttttataaaaacatgtgtatttaatgcattggaaattaaacaatttcactttttttaaaaata 36480518  T
Q  329 attt 332  Q
    ||||    
T  36480517 attt 36480514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 213 - 358
Target Start/End: Complemental strand, 13538535 - 13538390
Alignment:
Q  213 gaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaattta 312  Q
    ||||||||||| | || ||  ||||||||  |||||| ||||||||||||||||||||| ||||  | |||||| |||| |||| ||||||||  ||||     
T  13538535 gaaatgttaactagtgccctggggacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaattatttg 13538436  T
Q  313 acttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    | ||||||||||||||||||  |||||||| |||||||||||||||    
T  13538435 aattttttaaagaataattttctaatttagtatgcttaaagagtgc 13538390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 352
Target Start/End: Original strand, 9049156 - 9049256
Alignment:
Q  252 cttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    |||||||| ||||||||||||||||  |||||| |||||| ||||||||||||| |||||||| |||| ||||||||||| |||||||||  ||||||||    
T  9049156 cttaaataataactttttataaaaatttgtgtaattaatgcattgaaaattgaaaaatttaacattttaaaagaataattacttaatttaacatgcttaa 9049255  T
Q  352 a 352  Q
    |    
T  9049256 a 9049256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 357
Target Start/End: Original strand, 14663177 - 14663291
Alignment:
Q  244 ttaaggttcttaaatagtaactttttataaaaacat-gtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttag 342  Q
    |||||| ||||||||| ||| |||||| |||||  | ||| ||||||||||||| ||||||||| |||| |||| ||||||||||||||| ||||||||     
T  14663177 ttaagggtcttaaataataattttttaaaaaaaatttgtgcatttaatgtattggaaattgaactatttgacttatttaaagaataattttttaatttaa 14663276  T
Q  343 aatgcttaaagagtg 357  Q
    |||||||||| ||||    
T  14663277 aatgcttaaaaagtg 14663291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 363
Target Start/End: Original strand, 33275936 - 33276010
Alignment:
Q  289 atgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgctttgg 363  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||  |||||||||||||||||||| |||||    
T  33275936 atgtattgaaaattgaaatatttaacttttttaaaaaataatttcttgttttagaatgcttaaagagtgttttgg 33276010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 358
Target Start/End: Complemental strand, 32859927 - 32859779
Alignment:
Q  211 gggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaacttttt-ataaaaacatgtgtatttaatgtattgaaaattgaacaat 309  Q
    ||||||||||||||| ||  |||||| ||||  ||||| || |  ||||||| |||||| || ||||| ||||||||||||  |||| |||||||||  |    
T  32859927 gggaaatgttaacgagtgttcccggggcactctttaagattttagaatagtatcttttttatgaaaacttgtgtatttaatacattggaaattgaactgt 32859828  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    || ||||||||||||||||| ||| |||||||| ||| |||||||||||    
T  32859827 ttgacttttttaaagaataacttcctaatttagcatgtttaaagagtgc 32859779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 360
Target Start/End: Complemental strand, 8964465 - 8964384
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgctt 360  Q
    |||||| | |||| |||| ||||||||  |||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  8964465 tgtgtaatcaatgcattggaaattgaaatattttacttttttaaagaataattacttaatttagaatgcttaaacagtgctt 8964384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 356
Target Start/End: Complemental strand, 38292456 - 38292364
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaa-gaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||| ||||  ||||||||||||| ||||| |||||||| |||| |||||| |||| |||||||||| ||||||| ||||||||||||||    
T  38292456 tttttatgaaaagttgtgtatttaatgcattgataattgaactatttcacttttctaaaagaataatttcctaatttaaaatgcttaaagagt 38292364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 354
Target Start/End: Complemental strand, 41544119 - 41543975
Alignment:
Q  211 gggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatt 310  Q
    ||||||||||||||| |  ||||||  ||||  |||||| ||||||||| ||| ||||||| ||||  | |||||| | || |||| ||||||||| |||    
T  41544119 gggaaatgttaacgagtatccccggagcactctttaagggtcttaaataataattttttatgaaaaattatgtattcattgcattggaaattgaactatt 41544020  T
Q  311 t-aacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    | || ||||||||||||||||||| |||||||  |||||||||||    
T  41544019 tgaatttttttaaagaataatttcctaatttaatatgcttaaaga 41543975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 45372735 - 45372823
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttct-taatttagaatgcttaaa 352  Q
    ||||||||||||||||||||||||||| |||  ||||| ||| ||| |||||||||||| |||||||| | |||||||||||| |||||    
T  45372735 tttttataaaaacatgtgtatttaatgcattagaaattaaactattaaacttttttaaaaaataatttttctaatttagaatgtttaaa 45372823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 356
Target Start/End: Original strand, 565648 - 565804
Alignment:
Q  201 atttaatttagggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaa 300  Q
    ||||| ||||||||||||||||| | || ||||||| ||||  |||||| || |||| ||||||||||||| |||   |||||| ||| || || | |||    
T  565648 atttagtttagggaaatgttaactagtg-ccccggggcactgattaaggatcataaaaagtaactttttatgaaagtttgtgtaattagtgcataggaaa 565746  T
Q  301 ttgaacaatttaacttttttaaagaataattt--cttaatttagaatgcttaaagagt 356  Q
    ||||| | ||| || ||||||||||||| |||  |||||||||| |||||||||||||    
T  565747 ttgaaaactttcacatttttaaagaatacttttacttaatttagcatgcttaaagagt 565804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 358
Target Start/End: Complemental strand, 3882758 - 3882610
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaat 309  Q
    |||||||||||||||| || ||||||||||||  |||||   | ||| |||||| |  | || ||||  |||||| | |||| ||||||||  |||  ||    
T  3882758 agggaaatgttaacgagtgcccccgggacactctttaagaaccataagtagtaagtactcatgaaaatgtgtgtaatcaatgcattgaaaaccgaaatat 3882659  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    || || |||||||||||||||| |||| |||||||||||||||||||||    
T  3882658 ttgacctttttaaagaataattgcttattttagaatgcttaaagagtgc 3882610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 9153494 - 9153581
Alignment:
Q  266 ttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaag 353  Q
    |||||||||||  |||||||| |||| |||| ||||||||   |||  ||||||||||||||||||||||||||| |||| |||||||    
T  9153494 ttttataaaaatttgtgtattcaatgcattggaaattgaagtgtttgccttttttaaagaataatttcttaatttggaatccttaaag 9153581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 40347956 - 40348055
Alignment:
Q  255 aaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||||| ||||||| ||||  ||||||||||||  ||| ||||||||||  ||| ||||||||||||||||| ||| | || ||| |||||||||||    
T  40347956 aaatagtaattttttatgaaaatttgtgtatttaatacattaaaaattgaactgtttgacttttttaaagaataacttcctgatctagcatgcttaaaga 40348055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 2825968 - 2826066
Alignment:
Q  258 tagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||| | ||||||||||  |||||| | |||| |||| |||| |||  |||| ||||||||||| |||||||||||| ||||| |||||||||||||    
T  2825968 tagtaagtatttataaaaatgtgtgtaatcaatgcattggaaatcgaaatattttacttttttaaaaaataatttcttattttagtatgcttaaagagt 2826066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 33962950 - 33963036
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatt 339  Q
    ||||||| ||| ||||||| ||||  |||| ||| |||| |||||||||||||   || ||||||||||||||||||||||||||||    
T  33962950 ttaaataataaatttttatgaaaaattgtgcattcaatgcattgaaaattgaagtgttaaacttttttaaagaataatttcttaatt 33963036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 16717653 - 16717604
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  16717653 atttaatttttttaaagaataattacttattttagaatgcttaaagagtg 16717604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 7270361 - 7270298
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||  ||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||    
T  7270361 aatgtattataaattgaactatttaacttttttaaa-aataattttttaatttagaatgtttaaa 7270298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 18684504 - 18684365
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaat 309  Q
    |||||||||||||||| ||  ||| |||||||  |||||   ||  |||| ||||||||||| ||||  ||||||||||||  |||| ||||||||   |    
T  18684504 agggaaatgttaacgagtgctccctggacactctttaagagcctagaataataactttttatgaaaatttgtgtatttaatacattggaaattgaattgt 18684405  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgctt 349  Q
     | ||||||||||||||||| ||| |||||||| ||||||    
T  18684404 atgacttttttaaagaataacttcctaatttagcatgctt 18684365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 18734449 - 18734346
Alignment:
Q  255 aaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||||| ||||||| ||||  |||| ||| ||||||| | ||||||||   || ||||||||||| |||||||||||||||| ||||  |||| |||    
T  18734449 aaatagtaaatttttatgaaaaattgtgcattcaatgtatcggaaattgaagtgttaaacttttttaaggaataatttcttaattgagaaaccttagaga 18734350  T
Q  355 gtgc 358  Q
    ||||    
T  18734349 gtgc 18734346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 359
Target Start/End: Complemental strand, 28858163 - 28858097
Alignment:
Q  292 tattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    ||||||||||| || ||||| || ||||||||||||| || |||||||||||||||||||||| ||||    
T  28858163 tattgaaaattaaa-aatttgacatttttaaagaatatttacttaatttagaatgcttaaagaatgct 28858097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 45076190 - 45076240
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||||||||||||||| |||| ||||| ||| |||||||||||    
T  45076190 atttaacttttttaaagaataattgcttattttagtatgtttaaagagtgc 45076240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 11278820 - 11278764
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaactttttta 321  Q
    |||||||||||| |||||||  ||||| |||||||||||||  ||||||||||||||    
T  11278820 tttttataaaaatatgtgtaactaatgcattgaaaattgaaatatttaactttttta 11278764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 358
Target Start/End: Complemental strand, 25622627 - 25622528
Alignment:
Q  258 tagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||| | ||||| |||| || |||| |||||| ||||||||||| |  |||| |  |||||||| ||||||| |||||||||||||| ||||||||||    
T  25622627 tagtaaatatttatgaaaaaatatgtaattaatgcattgaaaattgtaatatttgatatttttaaa-aataattacttaatttagaatgtttaaagagtg 25622529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 37284933 - 37284997
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||| |||||||  |||||||| ||||||| ||||||||| |||  ||||||||||    
T  37284933 attgaaaattgaaaaatttaagatttttaaaaaataattacttaatttaaaatatttaaagagtg 37284997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 358
Target Start/End: Original strand, 42924386 - 42924529
Alignment:
Q  214 aaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaa 313  Q
    |||||||||||| || | ||||||||||| ||||||| | |||||||||| | ||||| ||||    |||| | |||   ||||||||||||  |||| |    
T  42924386 aaatgttaacgagtgtctccgggacactt-ttaaggtccataaatagtaaatatttatgaaaatgcatgtaatcaatacgttgaaaattgaaatatttga 42924484  T
Q  314 cttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
     |||||| || ||||||| |||  |||||||||||||||||||||    
T  42924485 ttttttttaaaaataattacttcttttagaatgcttaaagagtgc 42924529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 356
Target Start/End: Original strand, 431681 - 431744
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||| |||||||| | |||||| |||||||||||||||| |||||| ||||||  |||||||||    
T  431681 attggaaattgaaaattttaacatttttaaagaataattacttaatatagaatatttaaagagt 431744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 356
Target Start/End: Original strand, 12762918 - 12762981
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||| |||||||| | |||||| ||||| |||||||||| ||||||||  ||||||||||||||    
T  12762918 attggaaattgaaaattttaacattttttaagaataattacttaattttaaatgcttaaagagt 12762981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 357
Target Start/End: Complemental strand, 16944885 - 16944759
Alignment:
Q  232 ccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattg-aacaatttaacttttttaaagaataat 330  Q
    ||||||||||| |||| |   |||||| |||| ||||||||||||  |||||||| |||  ||||||||||| ||  ||| |  |||||||||||||||     
T  16944885 ccgggacactttttaaagacgttaaatggtaagtttttataaaaatttgtgtattcaatacattgaaaattgaaatgattgactttttttaaagaataac 16944786  T
Q  331 ttcttaatttagaatgcttaaagagtg 357  Q
    | | |||||||||||| |||| |||||    
T  16944785 tccgtaatttagaatgtttaaggagtg 16944759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 357
Target Start/End: Complemental strand, 17015550 - 17015424
Alignment:
Q  232 ccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattg-aacaatttaacttttttaaagaataat 330  Q
    ||||||||||| |||| |   |||||| |||| ||||||||||||  |||||||| |||  ||||||||||| ||  ||| |  |||||||||||||||     
T  17015550 ccgggacactttttaaagacgttaaatggtaagtttttataaaaatttgtgtattcaatacattgaaaattgaaatgattgactttttttaaagaataac 17015451  T
Q  331 ttcttaatttagaatgcttaaagagtg 357  Q
    | | |||||||||||| |||| |||||    
T  17015450 tccgtaatttagaatgtttaaggagtg 17015424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 24765429 - 24765319
Alignment:
Q  258 tagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||| || ||||||||| ||||||| | |||| |||| || ||| |  |||| | |||||||| ||||| ||||| ||||| | || |||||||||||    
T  24765429 tagtaagttattataaaaatatgtgtaatcaatgcattggaatttgtaatatttgatttttttaaggaatattttctaaatttgggatccttaaagagtg 24765330  T
Q  358 ctttggaggca 368  Q
    |||| ||||||    
T  24765329 ctttagaggca 24765319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 357
Target Start/End: Complemental strand, 27921927 - 27921885
Alignment:
Q  315 ttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||  ||||||||||||||||||||| |||||||||||    
T  27921927 ttttttaataaataatttcttaatttagaatacttaaagagtg 27921885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 44002378 - 44002480
Alignment:
Q  256 aatagtaactttttat-aaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    |||||||| ||||||| ||||| ||||||| ||||| |||||||| ||  |   |||||||||||||||||||  ||| | |||||| ||| ||||||||    
T  44002378 aatagtaaatttttatgaaaaatatgtgtaattaatatattgaaatttataacttttaacttttttaaagaattctttttaaatttaaaattcttaaaga 44002477  T
Q  355 gtg 357  Q
    |||    
T  44002478 gtg 44002480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 354
Target Start/End: Complemental strand, 14295715 - 14295626
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||||||||  |||||||| |||| ||||||||||| |  | ||||| |||| ||||||||||| || ||||| | || ||||||||    
T  14295715 tttttataaaaagttgtgtattcaatgcattgaaaattgtaatagttaaccttttaaaagaataattactaaatttgggattcttaaaga 14295626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 20065010 - 20064905
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||| ||  |||||| ||||  ||||||||||||  ||||||||||| |  | || ||||||| ||||||||||| ||  |||||| || ||||||    
T  20065010 ttaaatagaaaggttttatgaaaaattgtgtatttaatacattgaaaattgtaatagttgactttttaaaagaataattactatatttaggatccttaaa 20064911  T
Q  353 gagtgc 358  Q
    ||||||    
T  20064910 gagtgc 20064905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 357
Target Start/End: Complemental strand, 20128426 - 20128325
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    ||||| || |||||||||||| | ||||| | |||| |||| || ||| |  |||| ||||||||||||||||| || | ||||||| || |||||||||    
T  20128426 aatagaaattttttataaaaatacgtgtaatcaatgcattggaatttgtaacatttgacttttttaaagaataaattataaatttaggatccttaaagag 20128327  T
Q  356 tg 357  Q
    ||    
T  20128326 tg 20128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 24389698 - 24389735
Alignment:
Q  321 aaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  24389698 aaagaataattacttaatttagcatgcttaaagagtgc 24389735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 353
Target Start/End: Complemental strand, 25627012 - 25626947
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaag 353  Q
    ||||||||| |||| ||| | |||||  ||||||||||||||||  |||||||||||| |||||||    
T  25627012 aatgtattggaaatcgaaaactttaaaatttttaaagaataattatttaatttagaatacttaaag 25626947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 29865839 - 29865880
Alignment:
Q  313 acttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||| |||||||||||||||| |||||||| ||||||||    
T  29865839 actttttaaaagaataatttcttattttagaatccttaaaga 29865880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 30869614 - 30869672
Alignment:
Q  298 aaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||| | |||||| |||||||||||||| ||  |||||||| |||||||||||||||    
T  30869614 aaattgaaaactttaacatttttaaagaataaatt--taatttagcatgcttaaagagtgc 30869672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 31017341 - 31017402
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaattt 340  Q
    |||||||| |||| |||||||||| ||  |||| ||||||||||||||||||| || |||||    
T  31017341 tgtgtattaaatgcattgaaaattaaaatatttgacttttttaaagaataattactaaattt 31017402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 357
Target Start/End: Complemental strand, 39640213 - 39640136
Alignment:
Q  280 gtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||| ||| |||||||  |||||  |||||||||||||||| |||||||  ||| |||  |||||||||||||||    
T  39640213 gtgtattcaatatattgaatgttgaaatatttaacttttttaaaaaataattaattattttgaaatgcttaaagagtg 39640136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 39647843 - 39647884
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||| ||||||| |||||||||||||| ||||||||||    
T  39647843 tttttaaaaaataattacttaatttagaatgtttaaagagtg 39647884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 41079506 - 41079457
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||||| ||||||||||||| |||  ||| |||||||||||    
T  41079506 atttaacttttttaaggaataatttcttattttgaaattcttaaagagtg 41079457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 3199502 - 3199602
Alignment:
Q  260 gtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    ||||||||||| || ||  |||||||||| ||  ||||||||  ||  |||| | ||||||| | |||||||||||| ||||||||  ||||||||||||    
T  3199502 gtaactttttacaagaatttgtgtatttagtgctttgaaaatcaaaatatttgaattttttataaaataatttcttattttagaattattaaagagtgct 3199601  T
Q  360 t 360  Q
    |    
T  3199602 t 3199602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 364
Target Start/End: Original strand, 6411380 - 6411492
Alignment:
Q  252 cttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    |||||||| |||||||||||||||  ||||||| | | |  |||| |||||||| | ||| |  |||| ||||||||||| ||| |||||| ||| ||||    
T  6411380 cttaaataataactttttataaaagtatgtgtaatcagtacattggaaattgaaaacttttaaattttaaaagaataattactttatttagcatgtttaa 6411479  T
Q  352 agagtgctttgga 364  Q
    | |||||| ||||    
T  6411480 aaagtgctctgga 6411492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 10348994 - 10348950
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||||||||||  |||||||| |||||||| ||||||||||    
T  10348994 atttaacttttttaataaataatttgttaatttaaaatgcttaaa 10348950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 18375126 - 18375058
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||| ||||||||||| |   ||| ||||||||||||||||||||||| |||  |||| ||||||||||    
T  18375126 aatgcattgaaaattggagtttttgacttttttaaagaataatttctttattaggaatccttaaagagt 18375058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 27133115 - 27133063
Alignment:
Q  313 acttttttaaagaataatttcttaatttagaatgcttaaagagtgctttggag 365  Q
    ||||||||||||||||||| |||| ||||| ||| ||||||||| || |||||    
T  27133115 acttttttaaagaataattgcttattttagtatgtttaaagagtactctggag 27133063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 31513850 - 31513747
Alignment:
Q  255 aaatagtaactttttat-aaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaag 353  Q
    ||||||||||| ||||| ||||| ||||||| | |||| |||| |||| |||  |||||| |||||  || ||||||| |||| ||||||| ||||||||    
T  31513850 aaatagtaactatttatgaaaaaaatgtgtaatcaatgcattggaaatcgaaacatttaaatttttataaaaataatt-cttattttagaaagcttaaag 31513752  T
Q  354 agtgc 358  Q
    |||||    
T  31513751 agtgc 31513747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 37617451 - 37617499
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||| |||||||||||||||||  ||| |||| ||||||||||||||    
T  37617451 atttaatttttttaaagaataattatttattttaaaatgcttaaagagt 37617499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 357
Target Start/End: Complemental strand, 39309843 - 39309751
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||||| |||| || | |||  ||||||| |||||  |||| |||| ||||||||||| ||||| || ||||||| |||||| ||||    
T  39309843 tttttataaaaatatgtataatcaattcattgaaatttgaaatatttgacttatttaaagaatattttctaaacttagaatccttaaaaagtg 39309751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 237 - 358
Target Start/End: Original strand, 29487050 - 29487172
Alignment:
Q  237 acacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaattt-aacttttttaaagaataatttctt 335  Q
    |||||| |||||| | |||| ||||||||||||||||||| ||||||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  29487050 acacttcttaagggttttaagtagtaactttttataaaaatatgtgtattaaatgcattgaaaattgaactatttaaacttttttaaagaataatttctt 29487149  T
Q  336 aatttagaatgcttaaagagtgc 358  Q
    ||||||||||  | |||||||||    
T  29487150 aatttagaatattaaaagagtgc 29487172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 358
Target Start/End: Complemental strand, 12002410 - 12002261
Alignment:
Q  209 tagggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaa 308  Q
    ||||||||||||||| | || || |||| |||| ||||||| ||||||||||||||||||||||||||  |||||| | | || |||| |||||||| |     
T  12002410 tagggaaatgttaactagtgtccacggggcactggttaaggatcttaaatagtaactttttataaaaatttgtgtaatcagtgcattggaaattgaaaac 12002311  T
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||| || |||||||||||||||| |||||||||| || ||||||||||||    
T  12002310 ttttacatttttaaagaataattacttaatttagtatacttaaagagtgc 12002261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 244 - 357
Target Start/End: Original strand, 39691112 - 39691225
Alignment:
Q  244 ttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttaga 343  Q
    |||||| ||||||||||||| ||||||| ||||  |||||||| |||| |||||||||||||| |||| |||||||||||||||||||| ||||| | ||    
T  39691112 ttaaggatcttaaatagtaattttttatgaaaatttgtgtattcaatgcattgaaaattgaactatttgacttttttaaagaataattttttaatgtgga 39691211  T
Q  344 atgcttaaagagtg 357  Q
    ||||||||||||||    
T  39691212 atgcttaaagagtg 39691225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 37564342 - 37564443
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    ||||||||| |||||| ||||| ||||||||||||  |||| ||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||||||    
T  37564342 aatagtaaccttttatgaaaacttgtgtatttaatacattggaaattgaactatttgacttttttaaagaataatttcttaatttagcatgtttaaagag 37564441  T
Q  356 tg 357  Q
    ||    
T  37564442 tg 37564443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 210 - 358
Target Start/End: Complemental strand, 31265139 - 31264991
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaat 309  Q
    |||||||||||||||| ||  |||||| ||||  |||||   || ||||||||||||||||| ||||| ||||||||||||  |||| ||||||||   |    
T  31265139 agggaaatgttaacgagtgctcccggggcactctttaagagcctaaaatagtaactttttatgaaaacttgtgtatttaatacattggaaattgaattgt 31265040  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    || ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  31265039 ttgacttttttaaagaataacttcctaatttagcatgcttaaagagtgc 31264991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 239 - 356
Target Start/End: Original strand, 42022590 - 42022703
Alignment:
Q  239 acttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaat 338  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||   ||| |||||| ||||||||| |||| ||||||||||| |||||||| |||||    
T  42022590 acttgttaaggatcttaaataataactttttataaaa-catgtgt---taacgtattggaaattgaactatttgacttttttaaaaaataattttttaat 42022685  T
Q  339 ttagaatgcttaaagagt 356  Q
    ||| ||||||||||||||    
T  42022686 ttaaaatgcttaaagagt 42022703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 358
Target Start/End: Original strand, 20279589 - 20279667
Alignment:
Q  280 gtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||||||||||| |||| |||||||||||||||||||||    
T  20279589 gtgtatttaatgtattgaaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 20279667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 358
Target Start/End: Original strand, 21066216 - 21066294
Alignment:
Q  280 gtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||||||||||| |||| |||||||||||||||||||||    
T  21066216 gtgtatttaatgtattgaaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 21066294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 25382710 - 25382622
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaactttttt-aaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||||||||| |||||||||||| |||| |||||| || |||| |||||||| |||||||||||||||||||| |||||||||||    
T  25382710 tttttataaaaacaagtgtatttaatgcattggaaattggactattttactttttttaaagaataatttcttaatttggaatgcttaaa 25382622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 15352086 - 15352183
Alignment:
Q  259 agtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||| |||||||||| |  |||||||||||| |||| ||||||||| |||| ||||||||| |||||||||| ||||||||||||| |||||||||||    
T  15352086 agtaacattttataaaacc--gtgtatttaatg-attggaaattgaactatttgacttttttacagaataattttttaatttagaatgtttaaagagtgc 15352182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 357
Target Start/End: Original strand, 1502682 - 1502782
Alignment:
Q  258 tagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaattt-aacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||| ||||||| ||||  || |||||||||| ||||||||||||||  ||| || ||||||||||||||||||| |||||||||||| |||||||||    
T  1502682 tagtaattttttatgaaaatttgcgtatttaatgcattgaaaattgaactgtttgaatttttttaaagaataatttcctaatttagaatgtttaaagagt 1502781  T
Q  357 g 357  Q
    |    
T  1502782 g 1502782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 357
Target Start/End: Complemental strand, 25280070 - 25279924
Alignment:
Q  209 tagggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaa 308  Q
    ||||||||||||||||| || ||| ||| ||||  |||||   || ||||||||| ||||||| ||||| | ||||||||||  |||| ||||||||  |    
T  25280070 tagggaaatgttaacgagtgcccctggg-cactctttaagagcctaaaatagtaaatttttatgaaaacttatgtatttaatacattggaaattgaatta 25279972  T
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||| ||||||| ||||||||| ||| |||||||| ||||||||||||||    
T  25279971 tttgacttttt-aaagaataacttcctaatttagcatgcttaaagagtg 25279924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 358
Target Start/End: Original strand, 14016821 - 14016979
Alignment:
Q  200 aatttaatttagggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaa 299  Q
    |||||||  ||||||||||||||| | || ||||||| |||| |||||||  |||||||||||| |||||||||||   |||||  | | || |||| ||    
T  14016821 aatttaaagtagggaaatgttaactagtgcccccggggcactagttaaggaccttaaatagtaattttttataaaagtttgtgtgatcagtgcattggaa 14016920  T
Q  300 attgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||| | ||| |  |||| ||||||| ||| ||| |||||| |||||||||||||||    
T  14016921 attgaaaacttttaaattttgaaagaatcattactttatttagcatgcttaaagagtgc 14016979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 357
Target Start/End: Original strand, 39594454 - 39594600
Alignment:
Q  211 gggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatt 310  Q
    ||||||||||||||| || || |||| || | ||||||| ||||||||  ||||||||||| |||   ||| || | | |||| ||||||||||| | ||    
T  39594454 gggaaatgttaacgaatgccctcggggcattggttaaggatcttaaatgataactttttatgaaagtttgtataatcagtgtaatgaaaattgaaaactt 39594553  T
Q  311 taacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    | |  ||| ||||||||||||||||||||||| || |||||||||||    
T  39594554 tgatatttataaagaataatttcttaatttagcattcttaaagagtg 39594600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 11727905 - 11727993
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaattt 340  Q
    ||||||||| ||| |||| || ||||  ||| |||||||||||||||||||||||  |||| || |||||||||||||||||||||||||    
T  11727905 tcttaaataataagttttaatgaaaatttgtatatttaatgtattgaaaattgaagtatttgac-tttttaaagaataatttcttaattt 11727993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 42880935 - 42880879
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaaca 307  Q
    ||||||||||||| ||||||||||||||||||||||||||| || | ||||||||||    
T  42880935 tcttaaatagtaattttttataaaaacatgtgtatttaatgcatcggaaattgaaca 42880879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 358
Target Start/End: Original strand, 41106004 - 41106110
Alignment:
Q  252 cttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    ||||||| |||| ||||||  ||||  |||| ||| |||| |||||||||||||| |||| |||||||||| || |||||||||||||| |||| || ||    
T  41106004 cttaaatggtaagtttttacgaaaaattgtgaattcaatgcattgaaaattgaactatttgacttttttaatgattaatttcttaatttggaatcctcaa 41106103  T
Q  352 agagtgc 358  Q
    | |||||    
T  41106104 acagtgc 41106110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 27801232 - 27801337
Alignment:
Q  253 ttaaatagtaacttttta-taaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    ||||||||||| |||||| ||||||  |||||| | |||| ||||||||||| |  | || ||||||| ||||||||||| || ||||||||||| ||||    
T  27801232 ttaaatagtaagtttttaataaaaagttgtgtaatgaatgcattgaaaattgtaatagttgactttttaaaagaataattactaaatttagaatgattaa 27801331  T
Q  352 agagtg 357  Q
    ||||||    
T  27801332 agagtg 27801337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 356
Target Start/End: Complemental strand, 43841125 - 43841028
Alignment:
Q  259 agtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||| ||||| ||||||  |||||| | ||| |||| ||||||||| |||||||  |||||||||||||||| ||||||||| |||  |||||||||    
T  43841125 agtaattttttgtaaaaatttgtgtaatcaatatattaaaaattgaaaaatttaatatttttaaagaataattacttaatttacaatttttaaagagt 43841028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 357
Target Start/End: Complemental strand, 12640017 - 12639925
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||| ||||  |||||| | ||||| |||||||| |||  |||||||||||||||  | ||||||| |||||||||||||||||| ||||    
T  12640017 tttttatgaaaagttgtgtaatcaatgttttgaaaatcgaattatttaacttttttaataattaatttcctaatttagaatgcttaaaaagtg 12639925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 354
Target Start/End: Complemental strand, 41385407 - 41385263
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaat 309  Q
    |||||||||||||||| || ||||||| ||||  |||||| |  ||||||||||  |||| | ||||  |||||| | |||  |||||||||||||  ||    
T  41385407 agggaaatgttaacgagtgcccccggggcactctttaagggttataaatagtaaaattttgtgaaaatttgtgtaatcaatacattgaaaattgaaacat 41385308  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
     | ||||| |||| ||||||||||||| ||| || ||||||||||    
T  41385307 ctgactttcttaaggaataatttcttattttggattgcttaaaga 41385263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 44042636 - 44042532
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||| |||||||| |||  |||| ||| |||| |||| ||||||||  ||| |||||||| || ||||| ||||||||||  |||| ||||||    
T  44042636 ttaaatagtaagtttttatagaaatttgtgcattcaatgcattggaaattgaagtattgaactttttcaatgaatagtttcttaattatgaatccttaaa 44042537  T
Q  353 gagtg 357  Q
    |||||    
T  44042536 gagtg 44042532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 358
Target Start/End: Original strand, 1876443 - 1876594
Alignment:
Q  207 tttagggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaac 306  Q
    ||||||||||||||||| | || | || || || | |||||||   |||||| |||| ||||||| |||   |||||| | | || |||| ||||||||     
T  1876443 tttagggaaatgttaactagtgcctcctgggcattggttaaggactttaaatggtaattttttatgaaagtttgtgtaatcagtgcattggaaattgaaa 1876542  T
Q  307 aatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    | ||| || |||| ||||||||||| |||||||||| |||||||||||||||    
T  1876543 attttgacattttaaaagaataattacttaatttagcatgcttaaagagtgc 1876594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 356
Target Start/End: Complemental strand, 12787943 - 12787844
Alignment:
Q  257 atagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||| ||||||| ||||  |||| |||||||| |||| ||||||||  |||  ||||||| ||  |||||||| |||||||||||| ||||||||||    
T  12787943 atagtaagtttttatgaaaatttgtgcatttaatgaattggaaattgaagcattatactttttcaataaataattttttaatttagaattcttaaagagt 12787844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 38019489 - 38019528
Alignment:
Q  317 ttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  38019489 ttttaaagaataatttcttaatttagcatgcttaaagagt 38019528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 32271224 - 32271170
Alignment:
Q  298 aaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||| | |||||| |||||||| ||||||||||||||||| ||||||||||    
T  32271224 aaattgaaaactttaacatttttaaaaaataatttcttaatttaaaatgcttaaa 32271170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 34336515 - 34336585
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||| |||| ||||||||   ||| ||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  34336515 aatgcattggaaattgaagtttttgacttttttaaagaataatttctttattaagaatccttaaagagtgc 34336585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 42801151 - 42801073
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||| |||||| |||||||||||||  ||||  ||||| |||||||||||| |||| |||||||| |||||| ||||    
T  42801151 tgtgtaattaatgcattgaaaattgaaatatttgccttttgtaaagaataattacttattttagaatacttaaaaagtg 42801073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 358
Target Start/End: Complemental strand, 4166582 - 4166489
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||  |||| |||| ||| ||||||||| ||||||||  ||| |||||||| || |||||||||||| |||  |||| ||||||||||||    
T  4166582 tttttatggaaacttgtgcattcaatgtattggaaattgaaatattgaactttttcaatgaataatttcttgattatgaatccttaaagagtgc 4166489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 354
Target Start/End: Complemental strand, 11041129 - 11041065
Alignment:
Q  290 tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||||||||||||  ||||||||||||||  |||| |||||| | |||| ||||||||||||    
T  11041129 tgtattgaaaattgaaatatttaacttttttatggaatgatttctcattttaaaatgcttaaaga 11041065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 33285932 - 33286036
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||| ||||||| ||||  ||||||||||||  || ||||||||||   || || ||||| ||| ||||||||||||||| | ||  ||||||    
T  33285932 ttaaatagtaaatttttatgaaaaattgtgtatttaatacatcgaaaattgaaatgttaaattttttcaaaaaataatttcttaattgataaaccttaaa 33286031  T
Q  353 gagtg 357  Q
    |||||    
T  33286032 gagtg 33286036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 36176735 - 36176691
Alignment:
Q  315 ttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||    
T  36176735 tttttttaagaataatttcttcatttagaatgcttaaaaagtgct 36176691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 357
Target Start/End: Complemental strand, 22209504 - 22209401
Alignment:
Q  254 taaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaag 353  Q
    |||||||||| | ||||| |||| || |||| | ||||| ||| ||||  ||  ||||||||||||||| |||||||| |||  |||| |||||||||||    
T  22209504 taaatagtaagtatttatgaaaatatatgtaatcaatgtcttggaaatcaaaatatttaacttttttaaggaataattgcttcttttaaaatgcttaaag 22209405  T
Q  354 agtg 357  Q
    ||||    
T  22209404 agtg 22209401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 352
Target Start/End: Complemental strand, 44907325 - 44907218
Alignment:
Q  246 aaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaa-tttaacttttttaaagaataatttcttaatttagaa 344  Q
    |||| ||||||||||||| ||||||| |||    ||||  ||| || ||||||||||||| || ||| || |||||||| ||||||| ||||||||||||    
T  44907325 aaggatcttaaatagtaaatttttatgaaagttagtgttattagtgcattgaaaattgaaaaagtttgacatttttaaaaaataattacttaatttagaa 44907226  T
Q  345 tgcttaaa 352  Q
     |||||||    
T  44907225 agcttaaa 44907218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 31844224 - 31844330
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaa-tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    ||||||||||||||||||| |||   ||| || | || || |||| ||||| || | ||| |||||||||| |||||||| |||||||||||||  ||||    
T  31844224 ttaaatagtaactttttatgaaagtttgtataatgaagtgcattggaaattcaaaactttgacttttttaaggaataattacttaatttagaatatttaa 31844323  T
Q  352 agagtgc 358  Q
    |||||||    
T  31844324 agagtgc 31844330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 354
Target Start/End: Complemental strand, 34477884 - 34477810
Alignment:
Q  281 tgtatttaatgtattgaaaattgaacaatttaactt-ttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||| |||||||| ||||| ||| ||||||||| |||||  ||||||||||||||| |  ||||||||||||    
T  34477884 tgtatttgatgtattggaaattaaaccatttaactttttttagtgaataatttcttaatctgaaatgcttaaaga 34477810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 36782796 - 36782874
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||| ||||| ||||||||||||||||    |||| |||||||||||||||||| || |||  ||||| ||||||||||    
T  36782796 tgtgcatttattgtattgaaaattgaagtcattaatttttttaaagaataatttatttattaggaatgtttaaagagtg 36782874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 38710861 - 38710811
Alignment:
Q  212 ggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagta 262  Q
    |||||||||||||| || | ||||||||||| |||||| ||||||||||||    
T  38710861 ggaaatgttaacgagtgtctccgggacacttattaagggtcttaaatagta 38710811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 45368773 - 45368835
Alignment:
Q  296 gaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||  |||||||||||||| | |||||||||||  ||| |||| ||||||||||||    
T  45368773 gaaaattgaaatatttaacttttttataaaataatttctttttttggaatccttaaagagtgc 45368835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 1445140 - 1445245
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaa-tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    |||||| |||||||||| |||||   |||||| | || || ||||||||||||||| ||| || || |||||||   ||| |||||||||||| ||||||    
T  1445140 ttaaatggtaactttttctaaaagtttgtgtaataaagtgcattgaaaattgaacactttgacattattaaagagatattacttaatttagaaagcttaa 1445239  T
Q  352 agagtg 357  Q
    ||||||    
T  1445240 agagtg 1445245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 8785316 - 8785393
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||||||| || |||| ||||||||   ||||  |||||||||||||||||| || |||  |||||||||||||||    
T  8785316 tgtgtatttattgcattggaaattgaaatttttactttttttaaagaataatttattcattaggaatgcttaaagagt 8785393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 12230042 - 12229994
Alignment:
Q  298 aaattgaacaatttaacttttttaaagaataatttcttaatttagaatgc 347  Q
    ||||||||| |||| ||||||| ||||||||||||||| |||||||||||    
T  12230042 aaattgaactatttcacttttt-aaagaataatttcttgatttagaatgc 12229994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 12782817 - 12782772
Alignment:
Q  312 aacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||||||||||||| | || ||||| ||||||||||||||    
T  12782817 aacttttttaaagaataattgcatattttagtatgcttaaagagtg 12782772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 17599267 - 17599234
Alignment:
Q  313 acttttttaaagaataatttcttaatttagaatg 346  Q
    ||||||||||||||||||| ||||||||||||||    
T  17599267 acttttttaaagaataattacttaatttagaatg 17599234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 24103121 - 24103162
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||| ||| |||||||||||| ||||||||||||||||||||    
T  24103121 ttttaaaaaaataatttcttattttagaatgcttaaagagtg 24103162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 354
Target Start/End: Complemental strand, 24457926 - 24457825
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||| ||||||| ||||| ||||  ||||||| |||  ||||||||  |||  ||||||| || ||||| ||| |||||||||| | ||||||    
T  24457926 ttaaatagtaagtttttatgaaaacttgtgcttttaatgcatttgaaattgaaacattagactttttcaatgaatagttttttaatttagattccttaaa 24457827  T
Q  353 ga 354  Q
    ||    
T  24457826 ga 24457825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 36348552 - 36348601
Alignment:
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||||||||||||| |||| |||||  |||||||| |||||    
T  36348552 tttaacttttttaaagaataattgcttattttagtgtgcttaaaaagtgc 36348601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 2376798 - 2376838
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||||||||||||  |||||||| ||||||||||||||    
T  2376798 tttttaaagaataattatttaatttaaaatgcttaaagagt 2376838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 5218083 - 5218131
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaattta 341  Q
    |||||||||| || | |||||| ||||||||||||||||| ||||||||    
T  5218083 attgaaaattaaaaattttaacatttttaaagaataattttttaattta 5218131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 357
Target Start/End: Original strand, 5219434 - 5219525
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||  |||||||| ||||||||  ||||| ||  ||||||| | |||||| ||||||||||| ||||| |||  ||||||||||    
T  5219434 tttttataaaaatgtgtgtattcaatgtattagaaatttaagcatttaacgtctttaaa-aataatttcttgatttaaaatctttaaagagtg 5219525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 5293806 - 5293866
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgctttggaggca 368  Q
    ||||||||||| ||||||| |||| |||| |||| |||||||||||| ||||  |||||||    
T  5293806 atttaacttttataaagaacaattacttattttaaaatgcttaaagactgctccggaggca 5293866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 10565384 - 10565340
Alignment:
Q  313 acttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||| || ||||| |||||||||||||||| |||||||||||    
T  10565384 actttttcaatgaatagtttcttaatttagaattcttaaagagtg 10565340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 11533291 - 11533227
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||| |||||||| | ||| || ||||||||||||||||| ||||||||  ||| ||||||||||    
T  11533291 attggaaattgaaaactttgacatttttaaagaataatttattaatttaacatgtttaaagagtg 11533227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 13520989 - 13521033
Alignment:
Q  313 acttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||  |||||||||||| | |||||||||||||||||||    
T  13520989 acttttttagtgaataatttcttgaattagaatgcttaaagagtg 13521033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 13610524 - 13610568
Alignment:
Q  313 acttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||  |||||||||||| | |||||||||||||||||||    
T  13610524 acttttttagtgaataatttcttgaattagaatgcttaaagagtg 13610568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 18842325 - 18842365
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||||||||||||| ||||||||| |||| |||||||||    
T  18842325 tttttaaagaataattacttaatttaaaatggttaaagagt 18842365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 25163069 - 25163133
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||| ||||||||  |||| |||||||  ||||||||||| ||||||| |||| |||||||||||    
T  25163069 attggaaattgaaatatttgactttttctaagaataattttttaattttgaatacttaaagagtg 25163133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 30158132 - 30158172
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||| |||||||||||  |||||||||||||||||||||||    
T  30158132 ttttcaaagaataattatttaatttagaatgcttaaagagt 30158172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 30535082 - 30535014
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||| |||||||||||||  |||| | |||||||  |||||||||||   |||||||||||||||||||    
T  30535082 aatgcattgaaaattgaaacatttgatttttttatggaataatttctccttttagaatgcttaaagagt 30535014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 38047684 - 38047720
Alignment:
Q  320 taaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  38047684 taaagaaaaattacttaatttagaatgcttaaagagt 38047720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 38167518 - 38167438
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    |||| ||||| ||||||| ||||||||   ||||  ||||||||||||||||||||| ||    |||||||||||||||||    
T  38167518 tgtgcatttattgtattggaaattgaagtttttattttttttaaagaataatttcttcataagtaatgcttaaagagtgct 38167438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 359
Target Start/End: Original strand, 39644203 - 39644247
Alignment:
Q  315 ttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    ||||| |||||||||||| ||| || |||||||||||||||||||    
T  39644203 tttttaaaagaataattttttagttaagaatgcttaaagagtgct 39644247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 43238179 - 43238251
Alignment:
Q  284 atttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||||| || ||||||||||   || ||||||||||| |||||||||||||||| | ||  ||||||||||    
T  43238179 atttaatgcatcgaaaattgaagtgttaaacttttttaaggaataatttcttaattgaaaaaccttaaagagt 43238251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 210 - 359
Target Start/End: Complemental strand, 48551180 - 48551033
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaat 309  Q
    |||||||||||||| | || ||||||| |||| |||||||  || ||||||||||||||||||||||  |||||| |   || ||||||||||||| | |    
T  48551180 agggaaatgttaactagtg-ccccggg-cactagttaaggacctcaaatagtaactttttataaaaaattgtgtaatcggtgcattgaaaattgaaaact 48551083  T
Q  310 ttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    || || ||||||||||||||||||||||||||| ||||||||||||||||    
T  48551082 ttgacatttttaaagaataatttcttaatttagcatgcttaaagagtgct 48551033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 356
Target Start/End: Complemental strand, 11692820 - 11692729
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||||||||| | ||||||||||  |||| ||||| ||| |||| |||||||||||||||||||| ||||||||  |||||||||||||    
T  11692820 tttttataaaaacttatgtatttaatacattgcaaattaaactatttcacttttttaaagaataattttttaatttaatatgcttaaagagt 11692729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 54290786 - 54290889
Alignment:
Q  255 aaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||| || |||||||| ||||| ||||||||||||  |||| |||||||||  ||| ||||||||||||||||| ||| |||||||  |||||||||||    
T  54290786 aaataatatctttttatgaaaacttgtgtatttaatacattggaaattgaactgtttgacttttttaaagaataacttcctaatttatcatgcttaaaga 54290885  T
Q  355 gtgc 358  Q
    ||||    
T  54290886 gtgc 54290889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 356
Target Start/End: Complemental strand, 43804065 - 43803965
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    |||||||||||||||| ||||| ||||||||||||  |||| ||||||||   ||| ||||||||||||||||| ||   ||||||  ||||||||||||    
T  43804065 aatagtaactttttatgaaaacttgtgtatttaatacattggaaattgaattgtttgacttttttaaagaataactttccaatttatcatgcttaaagag 43803966  T
Q  356 t 356  Q
    |    
T  43803965 t 43803965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 24313615 - 24313545
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||| ||||||||||||| | ||| || ||||||||||||||||  ||||||||||||| |||||||||||    
T  24313615 aatgcattgaaaattgaaaactttgacatttttaaagaataattgtttaatttagaatgtttaaagagtgc 24313545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 40690289 - 40690186
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgctta 350  Q
    |||||||| ||| |||||||| ||||| |||||||| |||||||||||||||||||    ||  ||||| ||||||||||||| ||||||| |||  |||    
T  40690289 tcttaaatggtagctttttatgaaaacttgtgtattcaatgtattgaaaattgaac----tacatttttcaaagaataatttcctaatttaaaattatta 40690194  T
Q  351 aagagtgc 358  Q
     |||||||    
T  40690193 gagagtgc 40690186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 53040542 - 53040464
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||| |||  |||| ||||||||  |||| | ||||||||| ||||||||||||||||||||| |||||||||||    
T  53040542 tgtgtattcaatacattggaaattgaagtatttgaattttttaaataataatttcttaatttagaatccttaaagagtg 53040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 4824660 - 4824724
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||||||  |||||| |||||||   ||||||||||||||||||||| |||||||||||    
T  4824660 attgaaaattgaagtatttaaattttttagttaataatttcttaatttagaatccttaaagagtg 4824724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 341
Target Start/End: Complemental strand, 37388494 - 37388418
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaattta 341  Q
    ||||||||||||  |||||| | |||| |||||||| |||| ||||| || |||||||||||||||| |||||||||    
T  37388494 tttttataaaaatttgtgtaatcaatgcattgaaaactgaaaaatttcacatttttaaagaataattacttaattta 37388418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 54911295 - 54911199
Alignment:
Q  258 tagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    |||||||||||||| |||   | |||| | ||||||||||||||| || | |||||| |||| |||||||||||  ||||||||||||| |||||||    
T  54911295 tagtaactttttatgaaagtttatgtaatcaatgtattgaaaatttaaaactttaacattttaaaagaataattatttaatttagaatgtttaaaga 54911199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 357
Target Start/End: Complemental strand, 25317943 - 25317800
Alignment:
Q  214 aaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaa 313  Q
    |||||||||| | || | ||||| |||| |||||||  |||||||||||| |||||||||||   |||||| |  ||| |||| |||||||| | ||| |    
T  25317943 aaatgttaaccagtgtctccggggcactggttaaggaccttaaatagtaaatttttataaaagtttgtgtaatcgatgcattggaaattgaaaactttta 25317844  T
Q  314 cttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
      |||| ||||||||||| ||| |||||| |||||| |||||||    
T  25317843 aattttaaaagaataattactttatttagcatgcttgaagagtg 25317800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 358
Target Start/End: Complemental strand, 38009126 - 38009027
Alignment:
Q  260 gtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaa-tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||| ||||||| ||||  |||||  |||||  ||||||||||||| |  ||| ||||| |||| ||||||||||| |||||||||||||||||||||||    
T  38009126 gtaagtttttatgaaaatttgtgtgattaatccattgaaaattgaaaatgtttgactttcttaaggaataatttctcaatttagaatgcttaaagagtgc 38009027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 356
Target Start/End: Complemental strand, 46725716 - 46725653
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||||||||| | |||||| |||||| | ||||| | ||||||||||||||||||||||||    
T  46725716 attgaaaattgaaaattttaacatttttataaaataactacttaatttagaatgcttaaagagt 46725653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 334
Target Start/End: Complemental strand, 30299388 - 30299298
Alignment:
Q  244 ttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttct 334  Q
    |||||| ||||||||  ||||| |||||  |||  ||| ||||||||| |||||||||||||  | || ||||||||||||||||||||||    
T  30299388 ttaagggtcttaaatgataactatttatgcaaatttgtatatttaatgcattgaaaattgaattacttgacttttttaaagaataatttct 30299298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 341
Target Start/End: Complemental strand, 51039856 - 51039766
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaattta 341  Q
    |||||||  |||| ||||||| ||||  | |||||| |||  |||||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  51039856 tcttaaagcgtaaatttttatgaaaatttatgtattcaattcattgaaaattgaactatttgacttttttatagaataattttttaattta 51039766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 31581401 - 31581473
Alignment:
Q  272 aaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaat 345  Q
    ||||| ||||||||||||||  ||||||||| ||  ||||| ||||| |||||||| |||||||||||||||||    
T  31581401 aaaaatatgtgtatttaatgctttgaaaattaaattatttacctttt-taaagaatcatttcttaatttagaat 31581473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 37708496 - 37708431
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||||   ||||||||||||||||| ||||| |||| ||||  |||||||||||||||    
T  37708496 attgaaaattgaaatgtttaacttttttaaagactaattgcttattttaatatgcttaaagagtgc 37708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 42846053 - 42846118
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||||  | || ||||||| ||||||||||| || ||||||| |||||||||||||||    
T  42846053 attgaaaattgaaatagttgactttttcaaagaataattactaaatttaggatgcttaaagagtgc 42846118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 334
Target Start/End: Original strand, 55417458 - 55417538
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttct 334  Q
    ||||||||||| |||||||| |||   |||||  ||||||||||||||||||| |||||||| || ||||| ||||||||||    
T  55417458 ttaaatagtaagtttttatagaaattagtgtaactaatgtattgaaaattgaa-aatttaaccttcttaaaaaataatttct 55417538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 3027055 - 3027107
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagtgctttggaggca 368  Q
    |||||||| || |||| |||||||||||||||||||||||||||  |||||||    
T  3027055 tttttaaataaaaattacttaatttagaatgcttaaagagtgctccggaggca 3027107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 359
Target Start/End: Complemental strand, 3973910 - 3973806
Alignment:
Q  255 aaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||||| |||||||  |||  |||| |||||||| || | ||||||||   || ||||||||||| ||||||||||||||||  |||  ||||||||    
T  3973910 aaatagtaaatttttatggaaaattgtgcatttaatgcatcggaaattgaagcgttgaacttttttaaggaataatttcttaattgggaaaccttaaaga 3973811  T
Q  355 gtgct 359  Q
    |||||    
T  3973810 gtgct 3973806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 9342695 - 9342763
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||| ||||||||||||| | |||||| ||||||| ||||||||  ||||| ||||||||||| |||||    
T  9342695 aatgcattgaaaattgaaaactttaacatttttaatgaataattatttaatctagaatgcttatagagt 9342763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 45757988 - 45757924
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||| |||||||| | ||| || |||||||||||||||| |||||||||  ||||||||||||||    
T  45757988 attgtaaattgaaaactttgacatttttaaagaataattgcttaatttaacatgcttaaagagtg 45757924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 323
Target Start/End: Original strand, 46547746 - 46547857
Alignment:
Q  211 gggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatt 310  Q
    ||||||||||||||| ||  ||||| |||||  |||||| ||||| ||||||| ||||||| ||||  | |||||| |||| |||| ||||||||  |||    
T  46547746 gggaaatgttaacgagtgttcccgg-acactctttaagggtcttatatagtaattttttatgaaaaattatgtattcaatgcattggaaattgaattatt 46547844  T
Q  311 taacttttttaaa 323  Q
    | |||||||||||    
T  46547845 tgacttttttaaa 46547857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 48322248 - 48322316
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||||| |||| |||  |||| ||||||| ||| ||||||| |||| |||||||||||||||||||    
T  48322248 aatgtattggaaatcgaaacatttgactttttaaaaaaataattacttattttagaatgcttaaagagt 48322316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 50604087 - 50604047
Alignment:
Q  318 tttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  50604087 tttaaagaataattacttaatttagaatggttaaagagtgc 50604047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 357
Target Start/End: Original strand, 11465669 - 11465736
Alignment:
Q  290 tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||||||   ||| |||||||||||||||||||| || ||| | ||| |||||||||||    
T  11465669 tgtattgaaaattgaagtttttgacttttttaaagaataatttttttattaaaaatccttaaagagtg 11465736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 23159958 - 23159875
Alignment:
Q  262 aactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaat 345  Q
    ||||||| ||||||| || |||||| |||| |||  |||||||| |||||||  |||||||  ||||||||| |||||||||||    
T  23159958 aacttttaataaaaatatatgtattcaatgcattacaaattgaagaatttaatatttttaagaaataatttcataatttagaat 23159875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 358
Target Start/End: Complemental strand, 30082894 - 30082851
Alignment:
Q  315 ttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||||| | |||| |||||||||||||||||||||    
T  30082894 ttttttaaagaataactgcttattttagaatgcttaaagagtgc 30082851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 47930173 - 47930114
Alignment:
Q  260 gtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttt 319  Q
    |||| ||||||| ||||  |||||||||||||||||||||||| ||  ||||||||||||    
T  47930173 gtaaatttttatgaaaatttgtgtatttaatgtattgaaaattaaaatatttaacttttt 47930114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 7674336 - 7674286
Alignment:
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    ||||||||||||||||||||||||| |||| | |||||| | |||||||||    
T  7674336 tttaacttttttaaagaataatttcataatgtggaatgcctgaagagtgct 7674286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 8703376 - 8703426
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||||||| || |||| |||| |||||||||||||| ||||||    
T  8703376 atttaacttttttaaataacaattgcttattttagaatgcttaacgagtgc 8703426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 9055263 - 9055313
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||||||| || |||| |||| |||||||||||||| ||||||    
T  9055263 atttaacttttttaaataacaattgcttattttagaatgcttaacgagtgc 9055313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 322
Target Start/End: Original strand, 16992400 - 16992478
Alignment:
Q  244 ttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaa 322  Q
    |||||| ||| || ||||||||| || | ||||| |||||||| ||||| ||| ||||||||  |||||||||||||||    
T  16992400 ttaaggatctcaagtagtaacttattttgaaaacttgtgtattcaatgttttggaaattgaatcatttaacttttttaa 16992478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 28691957 - 28692035
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||| ||| ||||||  |||||||| | |||||| |||| ||||||||||| |||||||||  ||| ||||||||||    
T  28691957 tgtgtaattattgtattagaaattgaaaactttaacattttaaaagaataattacttaatttaatatgtttaaagagtg 28692035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 339
Target Start/End: Original strand, 29484855 - 29484929
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatt 339  Q
    |||||||| |||  |||||||| ||| ||||||||||||||   ||  | |||||||||||||||||||||||||    
T  29484855 tttttatagaaaattgtgtattcaatttattgaaaattgaagtgttagatttttttaaagaataatttcttaatt 29484929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 37359525 - 37359467
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    ||||||||||||| | |||||| ||||||  |||||||| ||||||||| |||||||||    
T  37359525 attgaaaattgaaaactttaacatttttatggaataattacttaatttaaaatgcttaa 37359467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 38388820 - 38388706
Alignment:
Q  244 ttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttaga 343  Q
    ||||| || ||||||||||| |||||||||||| ||||||| | |||| | |||||||  ||  |||| ||||||||| | | |||||||||  ||||||    
T  38388820 ttaagttttttaaatagtaaatttttataaaaatatgtgtaatcaatgcaatgaaaatcaaaatatttgacttttttataaattaatttcttcttttaga 38388721  T
Q  344 atgcttaaagagtgc 358  Q
    ||  ||||| |||||    
T  38388720 atctttaaatagtgc 38388706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 357
Target Start/End: Original strand, 39400298 - 39400388
Alignment:
Q  267 tttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||| |  |||| |||||| |||||||||| ||   |||||||| ||||||||||||||  ||| ||||| || |||||||||||    
T  39400298 tttataaaaatacatgtaattaatgcattgaaaattaaaatgtttaacttgtttaaagaataattaattattttagtatacttaaagagtg 39400388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 1997302 - 1997375
Alignment:
Q  284 atttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||||||||||||| | |||| ||||| ||  || | ||||||||||  |||| |||||||||||    
T  1997302 atttaatgtattgaaaattgaactaattaattttttcaataaacattttcttaattaggaatccttaaagagtg 1997375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 4275270 - 4275319
Alignment:
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||||||||||||||||| || ||| |||||  |||||||||||    
T  4275270 tttaacttttttaaagaataatttttttattaagaatctttaaagagtgc 4275319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 360
Target Start/End: Original strand, 25299070 - 25299151
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgctt 360  Q
    |||| ||||| || |||||||||||||   ||||  ||||||||||||||||||||| |||   |||||||||| |||||||    
T  25299070 tgtgcatttattgcattgaaaattgaaatctttactttttttaaagaataatttctttattagaaatgcttaaaaagtgctt 25299151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 29612056 - 29612015
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||||||||| |||| ||||||||| ||||||||||    
T  29612056 tttttaaagaataattacttattttagaatgtttaaagagtg 29612015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 32734724 - 32734675
Alignment:
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||| |||||||||||||||||||||| |||  |||| ||||||||||||    
T  32734724 tttaccttttttaaagaataatttctttattaggaatccttaaagagtgc 32734675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 39976789 - 39976713
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgctttggag 365  Q
    |||||||||||||| |||  |||| ||||||||||| |||||||  ||| ||||||||| | |||||||||| |||||    
T  39976789 aatgtattgaaaatagaaacatttgacttttttaaa-aataattgattattttagaatgttcaaagagtgctatggag 39976713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 47915021 - 47915062
Alignment:
Q  313 acttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||||||||||||||||||| |||  |||||||||||||    
T  47915021 acttttttaaagaataatttctttattatgaatgcttaaaga 47915062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 357
Target Start/End: Complemental strand, 2831602 - 2831542
Alignment:
Q  297 aaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||  |||| ||||| ||||| ||||||||||| |||| |||| |||||||||||    
T  2831602 aaaattgaaatatttgactttattaaaaaataatttcttgatttggaatccttaaagagtg 2831542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 359
Target Start/End: Original strand, 3995967 - 3996071
Alignment:
Q  255 aaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||||| |||||||  |||  |||| |||||||| || | ||||||||   || ||||||||||| |||||||| |||||||  |||  ||||||||    
T  3995967 aaatagtaaatttttatggaaaattgtgcatttaatgcatcggaaattgaagcgttgaacttttttaaggaataattgcttaattgggaaaccttaaaga 3996066  T
Q  355 gtgct 359  Q
    |||||    
T  3996067 gtgct 3996071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 4009519 - 4009599
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    |||| |||||||| || | ||||||||   || ||||||||||| ||||||||||||||||  |||  |||||||||||||    
T  4009519 tgtgcatttaatgcatcggaaattgaagcgttgaacttttttaaggaataatttcttaattgggaaaccttaaagagtgct 4009599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 336
Target Start/End: Original strand, 24658498 - 24658526
Alignment:
Q  308 atttaacttttttaaagaataatttctta 336  Q
    |||||||||||||||||||||||||||||    
T  24658498 atttaacttttttaaagaataatttctta 24658526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 360
Target Start/End: Complemental strand, 28874588 - 28874484
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    |||||||| ||||||| ||||  |||||| | |||| |||| || ||| |  |||| |||||||||||||||  ||||| ||||||| || ||||| |||    
T  28874588 aatagtaaatttttatgaaaaactgtgtaatcaatgcattggaatttgtaacattttacttttttaaagaatgttttctaaatttagtatccttaacgag 28874489  T
Q  356 tgctt 360  Q
    |||||    
T  28874488 tgctt 28874484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 32521376 - 32521412
Alignment:
Q  326 ataatttcttaatttagaatgcttaaagagtgctttg 362  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  32521376 ataattttttaaattagaatgcttaaagagtgctttg 32521412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 328
Target Start/End: Original strand, 34591051 - 34591171
Alignment:
Q  208 ttagggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaaca 307  Q
    |||||||||||||||||| || | | || |||||  ||||||  | | |||||||| ||||||| |||| |||||||  ||||||||||||| ||| |      
T  34591051 ttagggaaatgttaacgagtgtctctggaacactctttaaggaccattaatagtaagtttttatgaaaatatgtgtaactaatgtattgaaatttgtaac 34591150  T
Q  308 atttaacttttttaaagaata 328  Q
    |||||  |||||||| |||||    
T  34591151 atttactttttttaaggaata 34591171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 51592132 - 51592028
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||||||||||| |||||||  | || |||||||  ||| |||||| ||   ||||||||||  || ||||||||||| |||||| ||| ||||||    
T  51592132 ttaaatagtaacttttcataaaaatttatgaatttaattaattaaaaattaaagtttttaacttttaaaacgaataatttctaaatttaaaattcttaaa 51592033  T
Q  353 gagtg 357  Q
     ||||    
T  51592032 aagtg 51592028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 356
Target Start/End: Original strand, 24041014 - 24041133
Alignment:
Q  237 acacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttctta 336  Q
    |||||| |||||| ||||||||||||||||||||| ||||  | |||||||||||||||| ||||| ||| |||| | ||||||||||||||||||| ||    
T  24041014 acactttttaagggtcttaaatagtaactttttatgaaaagttatgtatttaatgtattggaaattaaactatttgaattttttaaagaataatttcata 24041113  T
Q  337 atttagaatgcttaaagagt 356  Q
    ||||   |||||||||||||    
T  24041114 atttgatatgcttaaagagt 24041133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 245 - 358
Target Start/End: Complemental strand, 16161529 - 16161413
Alignment:
Q  245 taaggttcttaaatagtaacttttt---ataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaattta 341  Q
    ||||| ||||||||||||| |||||   ||||||| |||||||||||||  |||||||||||||  ||||||||||||| || ||||||||| ||||||     
T  16161529 taagggtcttaaatagtaatttttttttataaaaatatgtgtatttaatccattgaaaattgaattatttaactttttttaaaaataatttcctaatttg 16161430  T
Q  342 gaatgcttaaagagtgc 358  Q
    |||||||||||||||||    
T  16161429 gaatgcttaaagagtgc 16161413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 25437884 - 25437986
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaactttt-ttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    |||||||||||||||| ||||| ||||||||||||  |||| |||||||||  ||| |||||| ||||||||||| |||||||||||| |||||||||||    
T  25437884 aatagtaactttttatgaaaacttgtgtatttaatacattggaaattgaactgtttcactttttttaaagaataacttcttaatttagcatgcttaaaga 25437983  T
Q  355 gtg 357  Q
    |||    
T  25437984 gtg 25437986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 355
Target Start/End: Complemental strand, 33590125 - 33590051
Alignment:
Q  281 tgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    |||||||||||||||| ||||||||| |||||| ||||| |||||||||||| ||||||||||||  ||||||||    
T  33590125 tgtatttaatgtattggaaattgaactatttaattttttaaaagaataatttattaatttagaatatttaaagag 33590051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 34032142 - 34032202
Alignment:
Q  298 aaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  34032142 aaattgaaatatttaacttttttaaagaataattacttattttagaatgcttaaagagtgc 34032202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 4434654 - 4434715
Alignment:
Q  267 tttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaata 328  Q
    |||||||||| ||||||||||||||||||||||||||||  |||||||||||| ||| ||||    
T  4434654 tttataaaaatatgtgtatttaatgtattgaaaattgaagtatttaactttttaaaataata 4434715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 8761986 - 8761922
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||||||  |||||||||||||| |||||||||||||  |||||||| |||||||||||    
T  8761986 attgaaaattgaaatatttaacttttttatagaataatttctttttttagaatccttaaagagtg 8761922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 10359175 - 10359084
Alignment:
Q  267 tttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||||| |||| |||| |||| |||||||||| ||| |||||| |||| |||| ||||||||  ||||||| |||| |||||||||||    
T  10359175 tttataaaaatatgtatattcaatgcattgaaaattaaactatttaagttttataaaaaataattttctaatttaaaatgtttaaagagtgc 10359084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 23023704 - 23023627
Alignment:
Q  281 tgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||| |||||||||||||  | || |||||||||  | |||||||||| | ||||||||||||||||||||    
T  23023704 tgtatttaatgcattgaaaattgaaacaattgacttttttagtggataatttctttaattagaatgcttaaagagtgc 23023627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 358
Target Start/End: Original strand, 30501103 - 30501252
Alignment:
Q  211 gggaaatgttaacgattggcccc-gggacacttgttaaggttcttaaatagtaacttttta-taaaaacatgtgtatttaatgtattgaaaattgaacaa 308  Q
    ||||||||||||||| || |||| ||| |||||||||||    ||||||||||| |||| | | ||||  |||||||| ||||||||| |||||| |  |    
T  30501103 gggaaatgttaacgagtgccccccggggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgtattgaatgtattggaaattgtaata 30501202  T
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
     || ||||||| ||||||||||| || ||||| | |||||||||||||||    
T  30501203 attgactttttaaaagaataattactaaatttgggatgcttaaagagtgc 30501252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 358
Target Start/End: Original strand, 30541446 - 30541595
Alignment:
Q  211 gggaaatgttaacgattggcccc-gggacacttgttaaggttcttaaatagtaacttttta-taaaaacatgtgtatttaatgtattgaaaattgaacaa 308  Q
    ||||||||||||||| || |||| ||| |||||||||||    ||||||||||| |||| | | ||||  |||||||| ||||||||| |||||| |  |    
T  30541446 gggaaatgttaacgagtgccccccggggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgtattgaatgtattggaaattgtaata 30541545  T
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
     || ||||||| ||||||||||| || ||||| | |||||||||||||||    
T  30541546 attgactttttaaaagaataattactaaatttgggatgcttaaagagtgc 30541595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 31914206 - 31914165
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  31914206 tttttaaagaataattacttaatttagaatgcttaaagagtg 31914165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 357
Target Start/End: Complemental strand, 36160391 - 36160314
Alignment:
Q  280 gtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||| ||||| ||||||||||  ||  |||| ||||||||||| ||||||| |||| ||||||||||||||||||||    
T  36160391 gtgtaattaatatattgaaaatcaaaacatttgacttttttaaaaaataattgcttattttagaatgcttaaagagtg 36160314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 36486979 - 36486906
Alignment:
Q  284 atttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||| || |||||||||||||   || |||||||||||||||||||||||| ||| | |||||||||||||||    
T  36486979 atttattgcattgaaaattgaagtcttgaacttttttaaagaataatttctttattaaaaatgcttaaagagtg 36486906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 967173 - 967098
Alignment:
Q  281 tgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||| |||| |||| ||||||||| |||| | |||||||||||||||| || |||||| | |||||||||||||    
T  967173 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataatatcctaatttggtatgcttaaagagt 967098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 2864234 - 2864313
Alignment:
Q  281 tgtatttaatgtattgaaaattgaa-caatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    ||||||||||| ||||||||||||| ||||| |  |||||||| | | ||||||||||  ||||||||||||||||||||    
T  2864234 tgtatttaatgcattgaaaattgaaacaattgactttttttaatggacaatttcttaaaatagaatgcttaaagagtgct 2864313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 368
Target Start/End: Original strand, 27310245 - 27310336
Alignment:
Q  278 atgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaattta-gaatgcttaaagagtgctttggaggca 368  Q
    |||| |||||| ||||||| ||||||||   ||  ||||||||||||||||||||| |||||||  |||||||||||||||||  |||||||    
T  27310245 atgtttatttattgtattggaaattgaattgttagacttttttaaagaataatttcataatttataaatgcttaaagagtgctccggaggca 27310336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 42265500 - 42265429
Alignment:
Q  288 aatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgct 359  Q
    |||| |||||||||||||   ||| |||||||||||||||||||| || ||| ||||| |||||||||||||    
T  42265500 aatgcattgaaaattgaaatttttgacttttttaaagaataatttttttattaagaatccttaaagagtgct 42265429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 352
Target Start/End: Complemental strand, 5149888 - 5149802
Alignment:
Q  266 ttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||| ||  |||||| ||||| ||||||||||| ||  ||||||| ||||||||||| ||||| |||||||| ||| ||||||    
T  5149888 ttttataagaaattgtgtaattaatatattgaaaattaaaatatttaacatttttaaagaacaattttttaatttataattcttaaa 5149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 357
Target Start/End: Complemental strand, 41583644 - 41583538
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgctta 350  Q
    |||| |||||||| ||||||| ||||  |||||||| |||| |||| || ||| |  |||||||||||| || ||||||||||| ||||| | || ||||    
T  41583644 tcttcaatagtaaatttttatgaaaatctgtgtattcaatgcattggaatttgtaatatttaactttttgaaggaataatttctaaatttgggatcctta 41583545  T
Q  351 aagagtg 357  Q
    |||||||    
T  41583544 aagagtg 41583538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 357
Target Start/End: Complemental strand, 3758280 - 3758195
Alignment:
Q  272 aaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||| |||| |||| |||| ||||||||| |||  |||| |||||||||||||||||||  ||| |||| |||| ||||||||||    
T  3758280 aaaaaaatgtatattcaatgcattgaaaatcgaaatatttgacttttttaaagaataattgattattttaaaatgtttaaagagtg 3758195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 4695108 - 4695067
Alignment:
Q  316 tttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  4695108 tttttaaagaataattttttaatttagcatgcttaaagagtg 4695067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 17437128 - 17437064
Alignment:
Q  255 aaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttt 319  Q
    |||||||||  |||||||||||  ||| ||||||||| |||||||||||||  ||||||||||||    
T  17437128 aaatagtaagattttataaaaatgtgtatatttaatgaattgaaaattgaaatatttaacttttt 17437064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 26663679 - 26663635
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||    
T  26663679 atttgacttttttaaaaaataatttcttattttagaatgcttaaa 26663635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 26935274 - 26935230
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||    
T  26935274 atttgacttttttaaaaaataatttcttattttagaatgcttaaa 26935230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 356
Target Start/End: Complemental strand, 12448730 - 12448667
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||||||||||  ||||||||||||||  ||||||||||||| |||| ||| ||||| ||||    
T  12448730 attgaaaattgaaatatttaacttttttattgaataatttcttattttaaaatccttaaggagt 12448667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 356
Target Start/End: Original strand, 18229565 - 18229712
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaacttttta-taaaaacatgtgtatttaatgtattgaaaattgaacaa 308  Q
    |||||||||||||||| ||   ||||||||||  |||||    |||||| |||| |||||| | ||||  ||| |||| ||||||||| |||||| |  |    
T  18229565 agggaaatgttaacgagtgcttccgggacactctttaagcactttaaatggtaagtttttaatgaaaaattgtttattgaatgtattggaaattgtaata 18229664  T
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
     |||||||||| ||||||||||| || ||||| | |||||||||||||    
T  18229665 gttaactttttaaaagaataattactaaatttgggatgcttaaagagt 18229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 17774326 - 17774388
Alignment:
Q  290 tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||| |||||||| ||||| |  |||||||||||||||| ||| ||||| ||||||||||    
T  17774326 tgtattggaaattgaaaaatttgatatttttaaagaataattacttgatttaaaatgcttaaa 17774388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 18963899 - 18963833
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatt 331  Q
    ||||||||||||  ||||||||||||| ||||||||||| |  | ||||||||| | ||||||||||    
T  18963899 tttttataaaaaattgtgtatttaatgcattgaaaattgtaatagttaacttttctcaagaataatt 18963833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 20125661 - 20125739
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatt 331  Q
    ||||||||||| ||||||| ||||  |||| ||||| || || ||||||||||   || ||||||||||||||||||||    
T  20125661 ttaaatagtaaatttttatgaaaaattgtgcatttagtgcatcgaaaattgaagtgttaaacttttttaaagaataatt 20125739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 25767573 - 25767635
Alignment:
Q  294 ttgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||||||||||||| |||||| |||||||||||  |||  |||||||| || |||||||||||    
T  25767573 ttgaaaattgaacactttaacatttttaaagaaatattatttaatttaaaaagcttaaagagt 25767635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 8221222 - 8221118
Alignment:
Q  253 ttaaatagtaacttttta-taaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    ||||||||||| |||||| ||||||  |||||||| |||| ||||||| ||| |  | || ||||||| | ||||||||| || ||||||||||| ||||    
T  8221222 ttaaatagtaagtttttaataaaaaattgtgtattgaatgcattgaaagttgtaatagttgactttttaagagaataattgctaaatttagaatg-ttaa 8221124  T
Q  352 agagtg 357  Q
    ||||||    
T  8221123 agagtg 8221118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 354
Target Start/End: Original strand, 14309106 - 14309195
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||| ||||  |||||| |||||| |||| |||||||| | ||| |  |||||||||||||| | |||||||||  |||||||||||    
T  14309106 tttttatgaaaatttgtgtaattaatgcattggaaattgaaaactttgatatttttaaagaataactacttaatttaatatgcttaaaga 14309195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 25331470 - 25331397
Alignment:
Q  283 tatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    |||| ||||| ||||||||| ||  |||||||||||| ||| ||||||||| ||| ||| ||| ||||||||||    
T  25331470 tattcaatgtgttgaaaattaaaatatttaactttttaaaaaaataatttcataacttaaaatccttaaagagt 25331397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 27146915 - 27146866
Alignment:
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||||||||||||||||| |||   ||| ||||||||||||    
T  27146915 tttaacttttttaaagaataatttctttattagaaatccttaaagagtgc 27146866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 36843213 - 36843168
Alignment:
Q  256 aatagtaactttttataaaaacatgtgtatttaatgtattgaaaat 301  Q
    ||||||||  ||||||||||| |||||||||||||| |||||||||    
T  36843213 aatagtaatattttataaaaatatgtgtatttaatgcattgaaaat 36843168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 39382507 - 39382556
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||||||||| |||||||||||  || |||| ||||||||||||||||    
T  39382507 atttaactttttaaaagaataattgtttgatttggaatgcttaaagagtg 39382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 354
Target Start/End: Original strand, 41568714 - 41568775
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    ||||||||||||| | ||| || ||||| |||||||||  |||||||||| |||||||||||    
T  41568714 attgaaaattgaaaactttgacatttttgaagaataataacttaatttagtatgcttaaaga 41568775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 22873543 - 22873471
Alignment:
Q  280 gtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||| |||| ||| |||||| ||  ||||||||||||||||||||||||  ||| |||| ||| ||||||    
T  22873543 gtgtattcaatgcattaaaaattaaaatatttaacttttttaaagaataattctttattttaaaatacttaaa 22873471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 29184960 - 29185008
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaa 313  Q
    |||||||||||||||||||||||||||  || ||||||| || ||||||    
T  29184960 tttttataaaaacatgtgtatttaatgcgttaaaaattgtactatttaa 29185008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 42877343 - 42877239
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||| |||||||  |||  |||||||| |||  |||||||||||||   || ||||||||| | ||||||||||| |||| ||||   |||||    
T  42877343 ttaaatagtaaatttttatggaaaattgtgtattcaatacattgaaaattgaaattttaaacttttttcatgaataatttctcaattgagaaactttaaa 42877244  T
Q  353 gagtg 357  Q
    |||||    
T  42877243 gagtg 42877239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 251 - 357
Target Start/End: Original strand, 25028703 - 25028809
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgctta 350  Q
    ||||||||  ||||||||||||||||| |||||||| |||| ||||||||||||||  ||| ||||||||||||||||||||  |||||| ||||| |||    
T  25028703 tcttaaattttaactttttataaaaacgtgtgtattcaatgcattgaaaattgaactgtttgacttttttaaagaataattttctaattttgaatgttta 25028802  T
Q  351 aagagtg 357  Q
    |||||||    
T  25028803 aagagtg 25028809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 358
Target Start/End: Original strand, 6586414 - 6586529
Alignment:
Q  243 gttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttag 342  Q
    ||||||| ||||||||||||||||||||| ||||  | ||| || |||| || | ||||||||| || | ||||||| ||||| ||||||| ||||||||    
T  6586414 gttaagggtcttaaatagtaactttttatgaaaatttatgttttcaatgcatcggaaattgaactatctgactttttcaaagattaatttcctaatttag 6586513  T
Q  343 aatgcttaaagagtgc 358  Q
     |||||||||||||||    
T  6586514 tatgcttaaagagtgc 6586529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 358
Target Start/End: Original strand, 31702705 - 31702852
Alignment:
Q  211 gggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatt 310  Q
    ||||||||||||||| ||  || ||||||||  ||||| | ||||||||||||||||||||||||| ||||||| | |||| |||  ||||| ||  | |    
T  31702705 gggaaatgttaacgaatgttcctgggacactctttaagatccttaaatagtaactttttataaaaatatgtgtaatcaatgcattagaaattaaaatact 31702804  T
Q  311 taacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||| | |||||||||||  |||  ||| ||||||||||||    
T  31702805 taacttttttataaaataatttcttcttttgaaattcttaaagagtgc 31702852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 32915063 - 32914969
Alignment:
Q  251 tcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaat 345  Q
    ||||||||  ||||||||||||||||||||||||| || |  ||| |||||| ||  |||||| |||||||||||||||||| ||||||||||||    
T  32915063 tcttaaatgataactttttataaaaacatgtgtatctattaaattaaaaattaaattatttaatttttttaaagaataattttttaatttagaat 32914969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 4810535 - 4810639
Alignment:
Q  254 taaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaa-caatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||||||||||| ||||||   ||||||||||| || |||||||||||| || ||| ||||||||||||||||||||  | ||||||||||||||||    
T  4810535 taaatagtaactttt-ataaaattttgtgtatttaaggtcttgaaaattgaaacatttttacttttttaaagaataattttctgatttagaatgcttaaa 4810633  T
Q  353 gagtgc 358  Q
     |||||    
T  4810634 tagtgc 4810639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 5678482 - 5678581
Alignment:
Q  257 atagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||| |||||||| |||  | | |||| ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |  |||| ||||||||||    
T  5678482 atagtaaatttttatagaaatttatatattcaatgtattgaaaattgaagtattaaacttttttaatgaataatttcttaactatgaatccttaaagagt 5678581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 358
Target Start/End: Complemental strand, 12132600 - 12132521
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||| |||| |||||||||||||  |||| || ||||||||||||| |||| |||| |||||||||| ||||||||    
T  12132600 tgtgtattaaatgcattgaaaattgaattatttgacgtttttaaagaatattttcataatatagaatgcttcaagagtgc 12132521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 360
Target Start/End: Original strand, 387453 - 387549
Alignment:
Q  265 tttttataaaaacatgtgtat--ttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgctt 360  Q
    |||||||||||||||||||||  || ||| |||  ||||||||   |||||||||||||||  ||||||| ||||||||||||| |||||||||||||    
T  387453 tttttataaaaacatgtgtatatttgatgcatttgaaattgaattgtttaacttttttaaaatataattttttaatttagaatg-ttaaagagtgctt 387549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 355
Target Start/End: Complemental strand, 23344709 - 23344568
Alignment:
Q  215 aatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaa-tgtattgaaaattgaacaatttaa 313  Q
    ||||||||||| || ||||||| |||| |||| |    |||||| ||||||||||||||||   |||||| | || || |||| |||||||||| ||| |    
T  23344709 aatgttaacgagtgcccccggggcactggttatgcactttaaatggtaactttttataaaagtttgtgtaataaagtgcattggaaattgaacactttga 23344610  T
Q  314 cttttttaaagaataatttcttaatttagaatgcttaaagag 355  Q
    | ||| |||||||  ||| |||||||||||| ||||||||||    
T  23344609 catttgtaaagaaatattacttaatttagaaagcttaaagag 23344568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 337
Target Start/End: Original strand, 30910436 - 30910521
Alignment:
Q  252 cttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaa 337  Q
    |||||||| ||| ||||||||||||  | |||| ||||||| || |||||| ||  |||||||||||| || ||||||||||||||    
T  30910436 cttaaataataagtttttataaaaatttatgtaattaatgtgttaaaaattaaaatatttaactttttgaatgaataatttcttaa 30910521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 356
Target Start/End: Complemental strand, 12307905 - 12307821
Alignment:
Q  272 aaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||| ||||||| ||||||||||||||||| ||  |||| ||||||||| | |||||||||||  |||  ||| ||||||||||    
T  12307905 aaaaatatgtgtaattaatgtattgaaaattaaaatatttgacttttttataaaataatttcttcttttgaaatccttaaagagt 12307821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 13445783 - 13445843
Alignment:
Q  298 aaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||| | ||| || ||||||||||||| || |||||||||| |||||||||||||||    
T  13445783 aaattgaaaactttcacatttttaaagaatacttacttaatttagcatgcttaaagagtgc 13445843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 29716728 - 29716876
Alignment:
Q  210 agggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaa-tgtattgaaaattgaacaa 308  Q
    |||||||||||||| | || ||||||| |||| |||||||   |||||| ||||| |||||| |||   |||||| | || || |||| |||||||| |     
T  29716728 agggaaatgttaactagtgcccccggggcactggttaaggactttaaatggtaaccttttatgaaagtttgtgtaataaagtgcattggaaattgaaaac 29716827  T
Q  309 tttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||| || |||| ||| ||||||| || ||||||||||||||||| ||||    
T  29716828 tttgacattttaaaaaaataattgctgaatttagaatgcttaaaaagtg 29716876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 2157190 - 2157265
Alignment:
Q  244 ttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttt 319  Q
    |||||| | |||||| |||| |||| || |||| ||||||| |||||| ||| |||||||||| ||||||||||||    
T  2157190 ttaagggttttaaatggtaaattttaatgaaaatatgtgtaattaatgcattaaaaattgaactatttaacttttt 2157265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 357
Target Start/End: Original strand, 6555050 - 6555149
Alignment:
Q  258 tagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||||| ||||||||||||   ||||| |||||| ||||||| ||  |  |||| |||||||||| ||||| ||||| ||||||||||  ||||||||||    
T  6555050 tagtaagtttttataaaaatcagtgtaattaatgcattgaaatttataacatttgacttttttaaggaatactttctaaatttagaatatttaaagagtg 6555149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 8176419 - 8176324
Alignment:
Q  259 agtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    |||||||| |||| |||| ||||||| |||||| || ||||||||||   ||| ||||||||||| | | |||||||  |||||||| ||||||||    
T  8176419 agtaacttattatgaaaatatgtgtaattaatgcatcgaaaattgaaatttttgacttttttaaaaatttatttcttcttttagaatccttaaaga 8176324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 12735500 - 12735567
Alignment:
Q  265 tttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataattt 332  Q
    ||||||| ||||  |||||||||||||||| ||||||||||  | |||| |||||||| |||||||||    
T  12735500 tttttatgaaaatttgtgtatttaatgtatcgaaaattgaattaattaagttttttaatgaataattt 12735567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 356
Target Start/End: Original strand, 29988394 - 29988437
Alignment:
Q  313 acttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||    
T  29988394 acttttttaaagaataatttcttaattgagaaaccttaaagagt 29988437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 358
Target Start/End: Complemental strand, 30739672 - 30739593
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||| |||| |||| |||| | || | |||||||||| | ||||||||| || |||||||||| ||||||||||||    
T  30739672 tgtgtattgaatgcattggaaatcgtaccagttaactttttaatagaataattactaaatttagaatacttaaagagtgc 30739593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 34921640 - 34921565
Alignment:
Q  279 tgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    |||||||| | || ||| |||||| ||  ||||||||||||||||||||||||  ||| |||||||||| ||||||    
T  34921640 tgtgtattaattgcattaaaaattaaaatatttaacttttttaaagaataattgattattttagaatgcctaaaga 34921565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 359
Target Start/End: Original strand, 3354843 - 3354949
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    ||||||| ||| |||||||  ||| |||| ||||||||| |||||||||| ||  | |||||||||||||  ||||| || |||||||| |||  |||||    
T  3354843 ttaaataataaatttttatggaaaaatgtttatttaatgaattgaaaatttaagtacttaacttttttaagaaataaatttttaatttaaaatatttaaa 3354942  T
Q  353 gagtgct 359  Q
    || ||||    
T  3354943 gaatgct 3354949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 24194179 - 24194213
Alignment:
Q  307 aatttaacttttttaaagaataatttcttaattta 341  Q
    ||||| |||||||||||||||||||||||||||||    
T  24194179 aatttgacttttttaaagaataatttcttaattta 24194213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 12226661 - 12226766
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaaca-atttaacttttttaaagaataatttcttaatttagaatgcttaa 351  Q
    |||||||||||  |||||| |||   |||| | ||| |||||||||||||||| | ||||||| |||| |||||||||||| ||| |||| |||  ||||    
T  12226661 ttaaatagtaatgttttatgaaattttgtgaaattagtgtattgaaaattgaaaatatttaacattttaaaagaataattttttattttaaaattattaa 12226760  T
Q  352 agagtg 357  Q
    ||||||    
T  12226761 agagtg 12226766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 29408042 - 29407997
Alignment:
Q  313 acttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||    
T  29408042 acttttttaaagaataatttctttattaggaatccttaaagagtgc 29407997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 34185097 - 34185138
Alignment:
Q  317 ttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  34185097 ttttaaagaataatttctttattaggaatgcttaaagagtgc 34185138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 320
Target Start/End: Original strand, 4806465 - 4806577
Alignment:
Q  208 ttagggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaaca 307  Q
    |||||||||||||||||| |  | ||||||||||  |||||   | | |||||||| ||||||| |||| ||||||| | |||||||||||| ||| |      
T  4806465 ttagggaaatgttaacgagttcctccgggacactctttaagaaccattaatagtaagtttttatgaaaatatgtgtaatcaatgtattgaaatttgtaac 4806564  T
Q  308 atttaactttttt 320  Q
    ||||| |||||||    
T  4806565 atttacctttttt 4806577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 13070513 - 13070617
Alignment:
Q  254 taaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaag 353  Q
    |||||||||||| ||||| |||| ||||||| | ||||||||| ||||   |  |||||||||||| ||| ||| ||| |||| ||||||||   |||||    
T  13070513 taaatagtaactatttatgaaaaaatgtgtaatcaatgtattggaaatcacaacatttaactttttaaaaaaattattgcttattttagaatatctaaag 13070612  T
Q  354 agtgc 358  Q
    |||||    
T  13070613 agtgc 13070617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 26311909 - 26311861
Alignment:
Q  253 ttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaat 301  Q
    ||||||| |||  ||||||||||| ||||||| ||||||||||||||||    
T  26311909 ttaaataataatattttataaaaatatgtgtaattaatgtattgaaaat 26311861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 30038932 - 30038864
Alignment:
Q  289 atgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    |||| ||||||||  ||| ||||||||||| || | |||||||||||| |||| ||| |||||||||||    
T  30038932 atgttttgaaaatcaaactatttaacttttatataaaataatttcttattttaaaattcttaaagagtg 30038864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 31759862 - 31759826
Alignment:
Q  284 atttaatgtattgaaaattgaacaatttaactttttt 320  Q
    |||||||| |||||||||||||| |||||||||||||    
T  31759862 atttaatgcattgaaaattgaactatttaactttttt 31759826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 211 - 354
Target Start/End: Complemental strand, 219334 - 219188
Alignment:
Q  211 gggaaatgttaacgattggccccgggacacttgttaaggttcttaaatagtaacttttt---ataaaaacatgtgtatttaatgtattgaaaattgaaca 307  Q
    ||||||||||||||| ||   || | |||||| |||||| ||||||||| ||| |||||   ||||||| || ||||||||||| |||| |||||||||     
T  219334 gggaaatgttaacgagtgtttccagaacactttttaagggtcttaaataataatttttttttataaaaatatatgtatttaatgcattggaaattgaact 219235  T
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaaga 354  Q
    |||| |||||| |||||||||||||| ||||||| ||||||||||||    
T  219234 atttgacttttgtaaagaataatttcctaatttaaaatgcttaaaga 219188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 357
Target Start/End: Complemental strand, 189167 - 189064
Alignment:
Q  254 taaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaag 353  Q
    |||||| ||| | ||||| |||| ||||||| ||||||||||  |||| |||  |||||||||||||||||||||||| |||| |||| |||||||||||    
T  189167 taaataataagtatttatgaaaatatgtgtaattaatgtattagaaatagaaatatttaacttttttaaagaataattgcttattttaaaatgcttaaag 189068  T
Q  354 agtg 357  Q
    ||||    
T  189067 agtg 189064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 21300 - 21366
Alignment:
Q  286 ttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaa 352  Q
    |||||||||| |||||| ||  ||||||| |||||||| ||||||||||||||||||||| ||||||    
T  21300 ttaatgtattaaaaattaaaatatttaacatttttaaaaaataatttcttaatttagaattcttaaa 21366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 341
Target Start/End: Complemental strand, 19667 - 19578
Alignment:
Q  252 cttaaatagtaactttttataaaaacatgtgtatttaatgtattgaaaattgaacaatttaacttttttaaagaataatttcttaattta 341  Q
    |||||||  ||||||||||| ||||  |||||| |  || |||| ||||||||| | |||||| |||||||||||||||| |||||||||    
T  19667 cttaaatgataactttttatgaaaatttgtgtaatcgatatattaaaaattgaaaactttaacatttttaaagaataattacttaattta 19578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 26760 - 26695
Alignment:
Q  293 attgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    ||||||||||||| | ||| || |||| ||| ||||||| |||||||||| |||||||||||||||    
T  26760 attgaaaattgaaaactttgacattttaaaataataattacttaatttagcatgcttaaagagtgc 26695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 5005 - 5071
Alignment:
Q  290 tgtattgaaaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagt 356  Q
    ||||||| ||||||||   ||||  ||||||||||||||||||||| |||  |||||||||||||||    
T  5005 tgtattggaaattgaagtctttactttttttaaagaataatttcttcattaggaatgcttaaagagt 5071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 122531 - 122577
Alignment:
Q  312 aacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||| ||||||||||||||||||| ||||  ||||||||||||    
T  122531 aactttttcaaagaataatttcttaattgagaaatcttaaagagtgc 122577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1681 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1681
Description:

Target: scaffold1681; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 721 - 672
Alignment:
Q  308 atttaacttttttaaagaataatttcttaatttagaatgcttaaagagtg 357  Q
    ||||||| |||||||| | ||||| |||| ||||||||||||||||||||    
T  721 atttaacctttttaaacactaattacttattttagaatgcttaaagagtg 672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 58099 - 58066
Alignment:
Q  8 caccagagaaacaccaaatcacaccaaacaagat 41  Q
    |||||||||||||||||||||| |||||||||||    
T  58099 caccagagaaacaccaaatcacgccaaacaagat 58066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 5816 - 5756
Alignment:
Q  298 aaattgaacaatttaacttttttaaagaataatttcttaatttagaatgcttaaagagtgc 358  Q
    |||||||| | ||| || ||||||||||| |||| ||||||||| ||| ||||||||||||    
T  5816 aaattgaaaactttgacatttttaaagaaaaattacttaatttaaaattcttaaagagtgc 5756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University