View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4885_high_11 (Length: 210)
Name: NF4885_high_11
Description: NF4885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4885_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 7595777 - 7595945
Alignment:
| Q |
14 |
atgaaggaattgaaggaaatatatttgcttccatatttaccaaaacagagaagctaaagcagaggattttatttatttttatcaagtaagtaaagtatag |
113 |
Q |
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| T |
7595777 |
atgaaggaattgaaggaaatatatttgcttccatatttaccaaaacagagaagctaaagcaggggattttatttttttttatcaagtaagtaaagtatag |
7595876 |
T |
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| Q |
114 |
taataataacnnnnnnnacatgcacgtgcacccaccctacatatataatttccatggaccacacgatagttatggatat |
192 |
Q |
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|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7595877 |
taataataactttttttacatg----------taccctacatatataatttccatggaccacacgatagttatggatat |
7595945 |
T |
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