View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4885_high_3 (Length: 436)

Name: NF4885_high_3
Description: NF4885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4885_high_3
NF4885_high_3
[»] chr4 (9 HSPs)
chr4 (19-436)||(38178452-38178869)
chr4 (21-112)||(5530734-5530825)
chr4 (21-112)||(5922977-5923068)
chr4 (21-112)||(5936386-5936477)
chr4 (331-412)||(5531862-5531943)
chr4 (339-412)||(5922085-5922158)
chr4 (233-269)||(5654607-5654643)
chr4 (233-269)||(10546155-10546191)
chr4 (233-269)||(18513257-18513293)
[»] chr2 (4 HSPs)
chr2 (331-436)||(11733556-11733661)
chr2 (21-111)||(11734138-11734228)
chr2 (233-269)||(18570979-18571015)
chr2 (233-269)||(25544488-25544524)
[»] chr3 (3 HSPs)
chr3 (21-111)||(53148130-53148220)
chr3 (233-269)||(40150587-40150623)
chr3 (233-269)||(34409358-34409394)
[»] chr8 (6 HSPs)
chr8 (332-431)||(45319609-45319708)
chr8 (21-111)||(40919556-40919646)
chr8 (231-268)||(1639495-1639532)
chr8 (240-269)||(27733861-27733890)
chr8 (231-268)||(34201063-34201100)
chr8 (66-111)||(45319460-45319505)
[»] chr1 (5 HSPs)
chr1 (19-113)||(45454419-45454513)
chr1 (360-431)||(45453282-45453353)
chr1 (232-269)||(3921673-3921710)
chr1 (234-270)||(2471228-2471264)
chr1 (233-269)||(11571592-11571628)
[»] chr7 (6 HSPs)
chr7 (19-100)||(34839872-34839953)
chr7 (336-436)||(34840062-34840162)
chr7 (240-275)||(35917390-35917425)
chr7 (235-269)||(30516373-30516407)
chr7 (233-269)||(38134422-38134458)
chr7 (233-269)||(44172906-44172942)
[»] scaffold0037 (1 HSPs)
scaffold0037 (233-268)||(102912-102947)
[»] chr6 (5 HSPs)
chr6 (233-268)||(6299519-6299554)
chr6 (233-268)||(6306329-6306364)
chr6 (231-264)||(33135837-33135870)
chr6 (232-264)||(1893390-1893422)
chr6 (233-269)||(19602197-19602233)
[»] scaffold0011 (1 HSPs)
scaffold0011 (233-269)||(240037-240073)
[»] chr5 (1 HSPs)
chr5 (233-269)||(11596471-11596507)


Alignment Details
Target: chr4 (Bit Score: 402; Significance: 0; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 19 - 436
Target Start/End: Complemental strand, 38178869 - 38178452
Alignment:
Q  19 cgaaaggtcattacaccgaaggcgctgagttgattgattccgttttggatgttgtgaggaaagaggctgagaattgcgattgcttgcaaggtattatatc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38178869 cgaaaggtcattacaccgaaggcgctgagttgattgattccgttttggatgttgtgaggaaagaggctgagaattgcgattgcttgcaaggtattatatt 38178770  T
Q  119 atcaatattctcttcgaattcaattttcaattattattaacatttcattgaagtgtagtaaccaagcacagacattgacacgacatgccgtaaataattt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38178769 atcaatattctcttcgaattcaattttcaattattattaacatttcattgaagtgtagtaaccaagcacagacattgacacgacatgccgtaaataattt 38178670  T
Q  219 gataaaatgacgtaataatactttgagaaaatgatataattcaatgtaatctcattttggtgctacaaactactttatgtgttgtgtgtttgagaaattt 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  38178669 gataaaatgacgtaataatactttgagaaaatgatataattcaatgtaatctcctttcggtgctacaaactacattatgtgttgtgtgtttgagaaattt 38178570  T
Q  319 gtaatgtgtgaacaggatttcaagtgtgtcattcattgggaggtggaactggttctggaatgggaacacttcttatttcgaagattagggaagagtatcc 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38178569 gtaatgtgtgaacaggatttcaagtgtgtcattcattgggaggtggaactggttctggaatgggaacacttcttatttcgaagattagggaagagtatcc 38178470  T
Q  419 ggatcgtatgatgttgac 436  Q
    ||||||||||||||||||    
T  38178469 ggatcgtatgatgttgac 38178452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 5530734 - 5530825
Alignment:
Q  21 aaaggtcattacaccgaaggcgctgagttgattgattccgttttggatgttgtgaggaaagaggctgagaattgcgattgcttgcaaggtat 112  Q
    ||||| ||||| || |||||||||||| | |||||||| ||| | |||||||| |||||||| ||||||||||| ||||||||||| |||||    
T  5530734 aaagggcattatactgaaggcgctgagcttattgattctgttcttgatgttgttaggaaagaagctgagaattgtgattgcttgcagggtat 5530825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 5923068 - 5922977
Alignment:
Q  21 aaaggtcattacaccgaaggcgctgagttgattgattccgttttggatgttgtgaggaaagaggctgagaattgcgattgcttgcaaggtat 112  Q
    ||||| ||||| || |||||||||||| | |||||||| ||| | |||||||| |||||||| ||||||||||| ||||||||||| |||||    
T  5923068 aaagggcattatactgaaggcgctgagcttattgattctgttcttgatgttgttaggaaagaagctgagaattgtgattgcttgcagggtat 5922977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 5936477 - 5936386
Alignment:
Q  21 aaaggtcattacaccgaaggcgctgagttgattgattccgttttggatgttgtgaggaaagaggctgagaattgcgattgcttgcaaggtat 112  Q
    ||||| |||||||| |||||||||||| | |||||||| ||| | |||||||| |||||||| ||||| ||  | ||||||||||| |||||    
T  5936477 aaaggacattacactgaaggcgctgagcttattgattctgttcttgatgttgttaggaaagaagctgaaaacagtgattgcttgcagggtat 5936386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 412
Target Start/End: Original strand, 5531862 - 5531943
Alignment:
Q  331 caggatttcaagtgtgtcattcattgggaggtggaactggttctggaatgggaacacttcttatttcgaagattagggaaga 412  Q
    ||||||||||||| || || ||| | || || |||||||| |||||||||||||| ||||| ||||| ||||| ||||||||    
T  5531862 caggatttcaagtatgccactcacttggtggaggaactgggtctggaatgggaactcttctgatttcaaagatcagggaaga 5531943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 412
Target Start/End: Complemental strand, 5922158 - 5922085
Alignment:
Q  339 caagtgtgtcattcattgggaggtggaactggttctggaatgggaacacttcttatttcgaagattagggaaga 412  Q
    ||||| ||||||||| | || || |||||||| |||||||||||||| ||||| ||||| ||||| ||||||||    
T  5922158 caagtatgtcattcactaggtggaggaactggatctggaatgggaacccttctcatttcaaagatcagggaaga 5922085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 5654643 - 5654607
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  5654643 ataataatttgagaaaatgacataattcaatgtaatc 5654607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 10546155 - 10546191
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  10546155 ataataatttgagaaaatgacataattcaatgtaatc 10546191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 18513293 - 18513257
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  18513293 ataataatttgagaaaatgacataattcaatgtaatc 18513257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 331 - 436
Target Start/End: Complemental strand, 11733661 - 11733556
Alignment:
Q  331 caggatttcaagtgtgtcattcattgggaggtggaactggttctggaatgggaacacttcttatttcgaagattagggaagagtatccggatcgtatgat 430  Q
    |||||||||||||||||||||||||||||||||| || ||||| || |||||||||||| | |||||||||||| | ||||| |||||||||||||||||    
T  11733661 caggatttcaagtgtgtcattcattgggaggtggcacgggttcaggcatgggaacacttttgatttcgaagattcgagaagaatatccggatcgtatgat 11733562  T
Q  431 gttgac 436  Q
    ||||||    
T  11733561 gttgac 11733556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 11734228 - 11734138
Alignment:
Q  21 aaaggtcattacaccgaaggcgctgagttgattgattccgttttggatgttgtgaggaaagaggctgagaattgcgattgcttgcaaggta 111  Q
    ||||||||||| ||||||||||||||| | |||||||| ||| | ||||||||  | ||||| ||||||||||| ||||||||||||||||    
T  11734228 aaaggtcattataccgaaggcgctgagcttattgattctgttcttgatgttgttcgtaaagaagctgagaattgtgattgcttgcaaggta 11734138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 18570979 - 18571015
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  18570979 ataataatttgagaaaatgacataattcaatgtaatc 18571015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 25544488 - 25544524
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| |||||||||||||||||||||| |||||||    
T  25544488 ataataatttgagaaaatgatataattcagtgtaatc 25544524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 53148220 - 53148130
Alignment:
Q  21 aaaggtcattacaccgaaggcgctgagttgattgattccgttttggatgttgtgaggaaagaggctgagaattgcgattgcttgcaaggta 111  Q
    ||||||||||| |||||||| |||||||||||||| || ||| | ||||||||  | ||||| || |||||||| ||||||||||||||||    
T  53148220 aaaggtcattataccgaaggtgctgagttgattgactctgttcttgatgttgttcgtaaagaagcagagaattgtgattgcttgcaaggta 53148130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 40150623 - 40150587
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| ||||||||||||||||||||||||||||||    
T  40150623 ataataatttgagaaaatgatataattcaatgtaatc 40150587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 34409394 - 34409358
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  34409394 ataatacttcgagaaaatgacataattcaatgtaatc 34409358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 431
Target Start/End: Original strand, 45319609 - 45319708
Alignment:
Q  332 aggatttcaagtgtgtcattcattgggaggtggaactggttctggaatgggaacacttcttatttcgaagattagggaagagtatccggatcgtatgatg 431  Q
    ||||||||||||||| || || |||||||| ||||| ||||||||||||||||| || || ||||| ||||| || ||||| || || ||||| ||||||    
T  45319609 aggatttcaagtgtgccactccttgggaggaggaacgggttctggaatgggaactctactcatttcaaagatcagagaagaataccctgatcgaatgatg 45319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 40919646 - 40919556
Alignment:
Q  21 aaaggtcattacaccgaaggcgctgagttgattgattccgttttggatgttgtgaggaaagaggctgagaattgcgattgcttgcaaggta 111  Q
    ||||| |||||||| ||||| |||||  | |||||||| ||| | ||||||||  | ||||| |||||||||||||| |||||||||||||    
T  40919646 aaaggacattacactgaaggagctgaacttattgattctgttcttgatgttgttcgaaaagaagctgagaattgcgactgcttgcaaggta 40919556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 268
Target Start/End: Original strand, 1639495 - 1639532
Alignment:
Q  231 taataatactttgagaaaatgatataattcaatgtaat 268  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  1639495 taataatattttgagaaaatgacataattcaatgtaat 1639532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 269
Target Start/End: Original strand, 27733861 - 27733890
Alignment:
Q  240 tttgagaaaatgatataattcaatgtaatc 269  Q
    ||||||||||||||||||||||||||||||    
T  27733861 tttgagaaaatgatataattcaatgtaatc 27733890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 34201100 - 34201063
Alignment:
Q  231 taataatactttgagaaaatgatataattcaatgtaat 268  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  34201100 taataataatttgagaaaatgacataattcaatgtaat 34201063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 45319460 - 45319505
Alignment:
Q  66 gatgttgtgaggaaagaggctgagaattgcgattgcttgcaaggta 111  Q
    |||||||| ||||| |||| ||||||||| ||||||||||||||||    
T  45319460 gatgttgtaaggaaggaggttgagaattgtgattgcttgcaaggta 45319505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 45454513 - 45454419
Alignment:
Q  19 cgaaaggtcattacaccgaaggcgctgagttgattgattccgttttggatgttgtgaggaaagaggctgagaattgcgattgcttgcaaggtatt 113  Q
    |||||||||| || || ||||| ||||||||||||||||| ||  | |||||||| ||||| |||||||||||||| |||||  | |||||||||    
T  45454513 cgaaaggtcactatacagaaggagctgagttgattgattcggtgcttgatgttgtcaggaaggaggctgagaattgtgattgtcttcaaggtatt 45454419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 45453353 - 45453282
Alignment:
Q  360 ggtggaactggttctggaatgggaacacttcttatttcgaagattagggaagagtatccggatcgtatgatg 431  Q
    ||||| |||||||||||||||||||||||| | ||||| ||||| ||||| || || || ||||| ||||||    
T  45453353 ggtggtactggttctggaatgggaacacttttgatttctaagatcagggaggaataccctgatcgaatgatg 45453282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 3921673 - 3921710
Alignment:
Q  232 aataatactttgagaaaatgatataattcaatgtaatc 269  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  3921673 aataataatttgagaaaatgacataattcaatgtaatc 3921710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 2471264 - 2471228
Alignment:
Q  234 taatactttgagaaaatgatataattcaatgtaatct 270  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  2471264 taataatttgagaaaatgagataattcaatgtaatct 2471228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 11571592 - 11571628
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  11571592 ataataatttgagaaaatgacataattcaatgtaatc 11571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 34839872 - 34839953
Alignment:
Q  19 cgaaaggtcattacaccgaaggcgctgagttgattgattccgttttggatgttgtgaggaaagaggctgagaattgcgattg 100  Q
    |||||||||||||||| |||||||||||  | |||||||| ||| | ||||||||  | ||||| |||||||||||||||||    
T  34839872 cgaaaggtcattacactgaaggcgctgaacttattgattcagttctcgatgttgttcgtaaagaagctgagaattgcgattg 34839953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 436
Target Start/End: Original strand, 34840062 - 34840162
Alignment:
Q  336 tttcaagtgtgtcattcattgggaggtggaactggttctggaatgggaacacttcttatttcgaagattagggaagagtatccggatcgtatgatgttga 435  Q
    ||||| ||||||||||| |||||||| ||||| || ||||||||||||||  |  | |||||||||||||| || || ||||| ||| | ||||||||||    
T  34840062 tttcaggtgtgtcattcgttgggaggaggaacgggatctggaatgggaactttgttgatttcgaagattagagaggaatatcctgataggatgatgttga 34840161  T
Q  436 c 436  Q
    |    
T  34840162 c 34840162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 35917425 - 35917390
Alignment:
Q  240 tttgagaaaatgatataattcaatgtaatctcattt 275  Q
    |||||||||||||||||||||||||||||| |||||    
T  35917425 tttgagaaaatgatataattcaatgtaatcacattt 35917390  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 30516407 - 30516373
Alignment:
Q  235 aatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||| ||||||||||||||||||||||||||||||    
T  30516407 aataatttgagaaaatgatataattcaatgtaatc 30516373  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 38134458 - 38134422
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  38134458 ataataatttgagaaaatgacataattcaatgtaatc 38134422  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 44172942 - 44172906
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  44172942 ataataatttgagaaaatgacataattcaatgtaatc 44172906  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 102912 - 102947
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaat 268  Q
    |||||| |||||||||||||||||||||||||||||    
T  102912 ataataatttgagaaaatgatataattcaatgtaat 102947  T

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Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 6299519 - 6299554
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaat 268  Q
    |||||| |||||||||||||||||||||||||||||    
T  6299519 ataataatttgagaaaatgatataattcaatgtaat 6299554  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 6306329 - 6306364
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaat 268  Q
    |||||| |||||||||||||||||||||||||||||    
T  6306329 ataataatttgagaaaatgatataattcaatgtaat 6306364  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Original strand, 33135837 - 33135870
Alignment:
Q  231 taataatactttgagaaaatgatataattcaatg 264  Q
    |||||||| |||||||||||||||||||||||||    
T  33135837 taataataatttgagaaaatgatataattcaatg 33135870  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 1893422 - 1893390
Alignment:
Q  232 aataatactttgagaaaatgatataattcaatg 264  Q
    ||||||| |||||||||||||||||||||||||    
T  1893422 aataataatttgagaaaatgatataattcaatg 1893390  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 19602233 - 19602197
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| |||||||||||||||||||||| |||||||    
T  19602233 ataataatttgagaaaatgatataattcagtgtaatc 19602197  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 240073 - 240037
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  240073 ataataatttgagaaaataatataattcaatgtaatc 240037  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 11596507 - 11596471
Alignment:
Q  233 ataatactttgagaaaatgatataattcaatgtaatc 269  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  11596507 ataataatttgagaaaatgacataattcaatgtaatc 11596471  T

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