View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4886-Insertion-1 (Length: 815)

Name: NF4886-Insertion-1
Description: NF4886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4886-Insertion-1
NF4886-Insertion-1
[»] chr4 (14 HSPs)
chr4 (17-815)||(17542685-17543514)
chr4 (238-675)||(20749478-20749935)
chr4 (606-815)||(11923972-11924186)
chr4 (606-815)||(12410298-12410513)
chr4 (145-316)||(31934657-31934829)
chr4 (602-815)||(13932874-13933098)
chr4 (333-446)||(19033717-19033832)
chr4 (193-268)||(16025755-16025829)
chr4 (89-191)||(16025679-16025781)
chr4 (628-708)||(18420801-18420882)
chr4 (165-218)||(19033517-19033570)
chr4 (19-76)||(19033386-19033444)
chr4 (395-436)||(11245518-11245559)
chr4 (625-711)||(12712815-12712902)
[»] chr2 (5 HSPs)
chr2 (19-802)||(18117621-18118444)
chr2 (606-815)||(18332208-18332417)
chr2 (607-668)||(23154708-23154769)
chr2 (607-668)||(23565965-23566026)
chr2 (611-708)||(27401947-27402046)
[»] scaffold1924 (1 HSPs)
scaffold1924 (28-814)||(396-1215)
[»] chr5 (9 HSPs)
chr5 (348-669)||(30190742-30191061)
chr5 (19-268)||(30190377-30190626)
chr5 (142-320)||(26725479-26725660)
chr5 (348-424)||(23596961-23597037)
chr5 (549-815)||(34178825-34179099)
chr5 (621-713)||(26058052-26058146)
chr5 (340-425)||(26725360-26725446)
chr5 (165-268)||(23596752-23596855)
chr5 (766-814)||(25559468-25559516)
[»] chr1 (5 HSPs)
chr1 (348-647)||(13303257-13303552)
chr1 (617-690)||(11843525-11843598)
chr1 (348-469)||(21307876-21307996)
chr1 (628-668)||(15807088-15807128)
chr1 (267-316)||(13303172-13303221)
[»] scaffold0431 (1 HSPs)
scaffold0431 (606-815)||(13950-14165)
[»] chr7 (17 HSPs)
chr7 (193-319)||(4548742-4548867)
chr7 (268-422)||(17141983-17142151)
chr7 (606-668)||(22522421-22522483)
chr7 (628-739)||(17910155-17910267)
chr7 (350-428)||(45342039-45342118)
chr7 (621-698)||(17999842-17999920)
chr7 (606-667)||(14280314-14280375)
chr7 (193-273)||(45342200-45342274)
chr7 (606-670)||(4548266-4548331)
chr7 (644-708)||(8250227-8250292)
chr7 (763-815)||(12396018-12396071)
chr7 (628-668)||(6461693-6461733)
chr7 (632-667)||(19311298-19311333)
chr7 (628-690)||(15817846-15817908)
chr7 (628-690)||(26426811-26426872)
chr7 (365-441)||(4548614-4548691)
chr7 (611-668)||(13487185-13487242)
[»] scaffold0070 (1 HSPs)
scaffold0070 (612-815)||(46338-46546)
[»] chr8 (10 HSPs)
chr8 (350-490)||(24819649-24819790)
chr8 (625-691)||(24270297-24270363)
chr8 (607-691)||(16216039-16216124)
chr8 (621-713)||(15061992-15062086)
chr8 (762-815)||(24062399-24062452)
chr8 (621-670)||(24820048-24820097)
chr8 (165-287)||(24819438-24819558)
chr8 (123-180)||(1686828-1686886)
chr8 (333-417)||(1687056-1687144)
chr8 (628-708)||(17124552-17124633)
[»] chr6 (8 HSPs)
chr6 (87-203)||(21746760-21746876)
chr6 (628-802)||(14487418-14487594)
chr6 (621-691)||(12331831-12331900)
chr6 (628-668)||(23090623-23090662)
chr6 (632-675)||(6777711-6777754)
chr6 (165-319)||(14633654-14633818)
chr6 (628-675)||(17912740-17912787)
chr6 (333-378)||(14633579-14633625)
[»] scaffold0086 (1 HSPs)
scaffold0086 (606-815)||(11317-11536)
[»] scaffold0111 (1 HSPs)
scaffold0111 (607-690)||(28582-28664)
[»] scaffold0035 (3 HSPs)
scaffold0035 (350-452)||(70951-71054)
scaffold0035 (622-670)||(71323-71371)
scaffold0035 (238-272)||(70838-70872)
[»] chr3 (12 HSPs)
chr3 (350-489)||(25386659-25386799)
chr3 (188-261)||(14306176-14306248)
chr3 (621-691)||(2278463-2278533)
chr3 (610-706)||(19978654-19978752)
chr3 (607-703)||(30084123-30084220)
chr3 (365-423)||(40354903-40354961)
chr3 (282-319)||(29650731-29650768)
chr3 (628-668)||(17385073-17385113)
chr3 (628-667)||(6808644-6808683)
chr3 (87-157)||(14306105-14306175)
chr3 (238-272)||(25386520-25386554)
chr3 (763-799)||(30177699-30177736)
[»] scaffold0338 (1 HSPs)
scaffold0338 (621-713)||(18581-18675)
[»] scaffold0171 (2 HSPs)
scaffold0171 (621-710)||(2834-2925)
scaffold0171 (19-95)||(3608-3685)
[»] scaffold0299 (1 HSPs)
scaffold0299 (632-669)||(10435-10472)
[»] scaffold0613 (1 HSPs)
scaffold0613 (610-710)||(2906-3009)
[»] scaffold0115 (1 HSPs)
scaffold0115 (630-689)||(41392-41451)
[»] scaffold0014 (1 HSPs)
scaffold0014 (630-728)||(201790-201888)
[»] scaffold0113 (1 HSPs)
scaffold0113 (621-691)||(24229-24299)


Alignment Details
Target: chr4 (Bit Score: 539; Significance: 0; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 539; E-Value: 0
Query Start/End: Original strand, 17 - 815
Target Start/End: Original strand, 17542685 - 17543514
Alignment:
Q  17 taatgaaatatgaatgaaccaatgtttgt-ggatgtttaataggttggttatcatgatgtggtcgatggtccgtctattacgtgattatgctataagaag 115  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17542685 taatgaaatatgaatgaaccaatgtttgttggatgtttaataggttggttatcatgatgtggtcgatggtccgtctattacgtgattatgctataagaag 17542784  T
Q  116 tgaggtagtttctttgtggtgatgattacttgacaattgtttctgattattgattatgaatatgtggaggtgattgcttgatgatgaatatgtagagatg 215  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  17542785 tgaggtagtttctttgtgctgatgattacttgacaaatgtttctgattattgattatgaatatgttgagatgattgcttgatgatgaatatgtagagatg 17542884  T
Q  216 atttattatttgatgaatgctggatgtgtggatgtattgtttgataatgcaatgtggagaa-----------taggtagagtaaattggtgttgtgcatt 304  Q
    |||    |||||||||||||| |||||||||||||||||||||||||||||||||||||||           || ||||| |||||||||||||||||||    
T  17542885 att----atttgatgaatgcttgatgtgtggatgtattgtttgataatgcaatgtggagaaaatgtggagaataagtagaataaattggtgttgtgcatt 17542980  T
Q  305 attgagttaatactt---------------ataagtcctatacgtggagcatatgtaaagatatg---------tagagggatcaatcggtaaaattacc 380  Q
    || |||| |||||||               |||||||||||| |||||| ||||||| |||||||         ||||||||||||||||||||||||||    
T  17542981 atcgagtcaatacttgtcatccatgcattcataagtcctatatgtggagtatatgtagagatatgaagagatagtagagggatcaatcggtaaaattacc 17543080  T
Q  381 tctgacatccaatagtaccacatgtatgtagagtcgagtctagaacatcacatgcacttgaaatgtgtgaaatgtgctatatttgattacttgacttggt 480  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  17543081 tccgacatccaatggtaccacatgtatgtagagtcgagtctagaacatcacatgcactagaaatgtgtgaaatgtgtcatatttgattacttgacttggt 17543180  T
Q  481 gaaatatgtggactatgtgatttgatgaatgtcggaatatgtaaagttgtggatttgtatatgttgttttgatatgcttgaggaataatgttgatacgat 580  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| || ||||||||    
T  17543181 gaaatatgtgaactatgtgatttgatgaatgtcggaatatgtagagttgtgaatttgtatatgttgtattgatatgcttgaggaataacgtcgatacgat 17543280  T
Q  581 aattcatttgaaattttgattaatattttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaatt 680  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | |||||||| ||| |||||||| |||||||    
T  17543281 aattcatttggaattttgattaata-tttatttgattatgtttattatgtggaatattatct-acccccaatggtcgtttggtagaccgcttaccaaatt 17543378  T
Q  681 gtatgaat-ggtagacggcttgcaagattgagtttcatttgctagtgagcttcttaaggatagcgtggagcaacctcctttctcttttgctcgagtctag 779  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17543379 gtatgaataggtagacggcttgcaagattgagtttcatttgctagtgagtttcttgaggatagcgtggagcaacctcctttctcttttgctcgagtctag 17543478  T
Q  780 ttaggctctgattagggtgtcaggtatttatgttta 815  Q
    ||||||||||||||||||||| ||||||||||||||    
T  17543479 ttaggctctgattagggtgtcgggtatttatgttta 17543514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 238 - 675
Target Start/End: Original strand, 20749478 - 20749935
Alignment:
Q  238 gatgtgtggatgtattgtttgataatgcaatgt---------ggagaataggtagagtaaattggtgttgtgcattattgagttaatactt--------- 319  Q
    |||||||||||||||||||||||||||||||||         ||| |||| |||||||||||||||||| | ||||||||||| |||||||             
T  20749478 gatgtgtggatgtattgtttgataatgcaatgtaggatatgtggataatatgtagagtaaattggtgttatacattattgagtcaatacttgacattcat 20749577  T
Q  320 ------ataagtcctatacgtggagcatatgtaaagatatgtagagggatcaatcggtaaaattacctctgacatccaatagtaccacatgtatgtagag 413  Q
          |||||||||||| |||||| ||||| | |||||||||||||| ||||||||||| ||||| || ||||||||||  ||||||||| ||||||||    
T  20749578 gtattcataagtcctatatgtggag-atatgcagagatatgtagagggttcaatcggtaacattacttccgacatccaatgataccacatgcatgtagag 20749676  T
Q  414 tcgagtctagaacatcacatgcacttgaaatgtgtgaaatgtgctatatttgattacttgacttggtgaaatatgtggactatgtgatttgatgaatgtc 513  Q
    |||||||||| ||||||||| ||||||||||||||||||||||   ||||||  ||| |||||||||||| |||||||||||||||||||||||| |||     
T  20749677 tcgagtctaggacatcacattcacttgaaatgtgtgaaatgtgtcgtatttgtgtacatgacttggtgaattatgtggactatgtgatttgatgattgtt 20749776  T
Q  514 ggaatatgtaaagttgtggatttgtatatgttgttttgatatgcttgaggaataatgttgatacgataattcatttgaaattttgattaatattttattt 613  Q
    |  ||||||  ||||||||| || |||||||||| ||||||| |||||| |||||||| |||| ||||||  || || ||| | |||||||  || ||||    
T  20749777 gacatatgtggagttgtggactt-tatatgttgtattgatatacttgagaaataatgtcgatatgataatctatctggaatctggattaat-gttcattt 20749874  T
Q  614 gattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgcc 675  Q
    ||||||||||||| |||||||||| | |||||| | |||| ||||| |||||||||| ||||    
T  20749875 gattatgtttatt-tgtggaatataaactaacctcgagtgatcgtttggttgaccgcctgcc 20749935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 606 - 815
Target Start/End: Original strand, 11923972 - 11924186
Alignment:
Q  606 ttttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatg-gtagacggcttgcaa 704  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||| ||||||||   |||| | ||||||||||  ||||||||||||||     
T  11923972 ttttatttgattatgattattatgtagaataatatctaacccccagtggtcgtttggttgacctgctgcctatttgtatgaataagtagacggcttgcag 11924071  T
Q  705 gattgagtt----tcatttgctagtgagcttcttaaggatagcgtggagcaacctcctttctcttttgctcgagtctagttaggctctgattagggtgtc 800  Q
    |||||||||    |  || | ||||||| |  || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11924072 gattgagttgttttgcttcgttagtgagttgtttgaggatagcgtggagctacctcctttctcttttgctcgagtctagttaggctctgattagggagtc 11924171  T
Q  801 aggtatttatgttta 815  Q
     || |||||||||||    
T  11924172 gggaatttatgttta 11924186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 606 - 815
Target Start/End: Original strand, 12410298 - 12410513
Alignment:
Q  606 ttttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatgg-tagacggcttgcaa 704  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||||||| |||| ||||| |||| | ||||| |||||| |||||| ||||||     
T  12410298 ttttatttgattatattttttgtgtggaatattatctaacccctagtggtcgtttggttaaccgcctgcctatttgtacgaatggttagacgacttgcag 12410397  T
Q  705 gattgag----tttcatttgctagtgagcttcttaaggatagcgtggagcaacctcctttctcttttgctcgagtctagtta-ggctctgattagggtgt 799  Q
    |||||||    |||  |||| ||||||| | ||  |||||||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  12410398 gattgagttgttttgctttgatagtgagttgctcgaggatagcatggagccacctcctttcttttttgctcgagtctagttagggctctgattagggtgt 12410497  T
Q  800 caggtatttatgttta 815  Q
    ||   |||||||||||    
T  12410498 caaccatttatgttta 12410513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 145 - 316
Target Start/End: Complemental strand, 31934829 - 31934657
Alignment:
Q  145 ttgacaattgtttctgattattgattatgaatatgtggaggtgattgcttgatgatgaatatgtagagatgatttattatttgatgaatgctggatgtgt 244  Q
    ||||||||||||| || || |||||||||||||| ||||| | | || ||||||||||||||||||||||||||| |  |||||| |||| | |||||||    
T  31934829 ttgacaattgtttatggttgttgattatgaatatctggagttaaatgtttgatgatgaatatgtagagatgatttgtcctttgataaatg-ttgatgtgt 31934731  T
Q  245 ggatgtattgtttgataatgca--atgtggagaataggtagagtaaattggtgttgtgcattattgagttaata 316  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||||||| |||| ||||    
T  31934730 ggatgtattgtttgataatgcaatatgtggagaatatgtagagtaaattggtgttatgcattatcgagtcaata 31934657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 602 - 815
Target Start/End: Complemental strand, 13933098 - 13932874
Alignment:
Q  602 aatattttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaat-ggtagacggctt 700  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| |||| | ||||||||||  ||| |  ||||    
T  13933098 aatattttatttgattatgtttattatgtgaaatattatctaacccccagtggtcgtttggttgaccgcctgcctatttgtatgaataagtaaatagctt 13932999  T
Q  701 gcaagattgag----tttcatttgc------tagtgagcttcttaaggatagcgtggagcaacctcctttctcttttgctcgagtctagttaggctctga 790  Q
    ||| ||||  |    |||| |||||      ||||||| | ||| ||||||| ||||||| ||| ||||||||||||||||  ||||||||||||| | |    
T  13932998 gcaggatttggttgttttcctttgctttgattagtgagttgcttgaggatagtgtggagctaccacctttctcttttgctcacgtctagttaggctataa 13932899  T
Q  791 ttagggtgtcaggtatttatgttta 815  Q
     |||||||||||  |||||||||||    
T  13932898 ctagggtgtcagacatttatgttta 13932874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 333 - 446
Target Start/End: Original strand, 19033717 - 19033832
Alignment:
Q  333 gtggagcatatgtaaaga-tatgtagagggatcaatcggtaaaattacctctgacatcc-aatagtaccacatgtatgtagagtcgagtctagaacatca 430  Q
    |||||| ||||||| ||| ||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||  ||||| ||||||||||||| ||| |    
T  19033717 gtggagaatatgtagagaatatgtagaggggtcaatcagtaaaattacctctgacatccaaatggtaccacatacatgtatagtcgagtctagagcatta 19033816  T
Q  431 catgcacttgaaatgt 446  Q
    ||||||||||| ||||    
T  19033817 catgcacttgagatgt 19033832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 16025755 - 16025829
Alignment:
Q  193 ttgatgatgaatatgtagagatgatttattatttgatgaatgctggatgtgtggatgtattgtttgataatgcaat 268  Q
    ||||| |||||||||||||||||||| | |||||||| |||  | ||||| || ||||||||||||||||||||||    
T  16025755 ttgattatgaatatgtagagatgattgagtatttgat-aattgttgatgtatgaatgtattgtttgataatgcaat 16025829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 16025679 - 16025781
Alignment:
Q  89 tctattacgtgattatgctataagaagtgaggtagtttctttgtggtgatgattacttgacaattgtttctgattattgattatgaatatgtggaggtga 188  Q
    ||||||| |||||| ||||||| |||   | || ||||||||||  |||||  | |||||||||||||| ||||| |||||||||||||||| ||| |||    
T  16025679 tctattatgtgattgtgctatatgaaacaatgtcgtttctttgtaatgatggctccttgacaattgtttatgattgttgattatgaatatgtagagatga 16025778  T
Q  189 ttg 191  Q
    |||    
T  16025779 ttg 16025781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 18420801 - 18420882
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatgg-tagacggcttgcaagatt 708  Q
    ||||||||||||||||||| | |||||||||| |||||||||   ||| | ||| |||||||| ||||||||||||| ||||    
T  18420801 tgtggaatattatctaacctccagtggtcgtttggttgaccgtcggcctatttgcatgaatggatagacggcttgcaggatt 18420882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 19033517 - 19033570
Alignment:
Q  165 ttgattatgaatatgtggaggtgattgcttgatgatgaatatgtagagatgatt 218  Q
    ||||| |||||||||| ||| |||||  ||||||||||||||||||||||||||    
T  19033517 ttgatgatgaatatgtagagatgattatttgatgatgaatatgtagagatgatt 19033570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 19033386 - 19033444
Alignment:
Q  19 atgaaatatgaatgaaccaatgtttg-tggatgtttaataggttggttatcatgatgtg 76  Q
    |||||||||||||||| ||||| ||| | ||||| ||||||||| ||||||||||||||    
T  19033386 atgaaatatgaatgaaacaatgattgattgatgtataataggtttgttatcatgatgtg 19033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 11245559 - 11245518
Alignment:
Q  395 gtaccacatgtatgtagagtcgagtctagaacatcacatgca 436  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  11245559 gtaccacatgtatgtaaagtcgtgtctagaacattacatgca 11245518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 711
Target Start/End: Complemental strand, 12712902 - 12712815
Alignment:
Q  625 ttatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatgg--tagacggcttgcaagattgag 711  Q
    ||||||||||||| |||||||||| ||| |||||| |||||||||| |  | | ||||||||||||  |||||||| |||| |||||||    
T  12712902 ttatgtggaatataatctaacccc-agtagtcgtttggttgaccgcctatccatttgtatgaatggcatagacggcgtgcatgattgag 12712815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 243; Significance: 1e-134; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 19 - 802
Target Start/End: Complemental strand, 18118444 - 18117621
Alignment:
Q  19 atgaaatatgaatgaaccaatgtttgt-ggatgtttaataggttggttatcatgatgtggtcgatggtccgtctattacgtgattatgctataagaagtg 117  Q
    |||||||| ||||| |||||||||||| |||||||||||||||||||||| |||||||| | |||||||| ||||||| |||||||||||||| ||||      
T  18118444 atgaaataagaatggaccaatgtttgttggatgtttaataggttggttataatgatgtgattgatggtccatctattatgtgattatgctatatgaagca 18118345  T
Q  118 aggtagtttctttgtggtgatgattacttgacaattgtttctgattattgatt-atgaatatgtggaggtgattgcttgatgatgaatatgtagagatga 216  Q
    | || ||||||||||  ||||||||| ||||||||||||| ||||| |||||| ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  18118344 atgttgtttctttgtaatgatgattatttgacaattgtttatgattgttgatttatgaatacgtggagatgaatgcttgatgatgaatatgtagagatga 18118245  T
Q  217 tttattatttgatgaatgctggatgtgtggatgtattgtttgataatgca------------atgtggagaataggtagagtaaattggtgttgtgcatt 304  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||            |||||||||||| |||||||||||||||||| ||||||    
T  18118244 tttattatttaatgaatgcttgatgtgtggatgtattgtttgataatgcaatatgtggagatatgtggagaatatgtagagtaaattggtgttttgcatt 18118145  T
Q  305 attgagttaatactt---------------ataagtcctatacgtggag---------catatgtaaagatatgtagagggatcaatcggtaaaattacc 380  Q
    || |||| |||||||               |||||||||||| ||| ||          ||||| | ||||||||||||||||| |||||||||||||||    
T  18118144 atcgagtcaatacttgccatccatgcattcataagtcctatatgtgaagatatgtagagatatgcagagatatgtagagggatcgatcggtaaaattacc 18118045  T
Q  381 tctgacatccaatagtaccacatgtatgtagagtcgagtctagaacatcacatgcacttg-aaatgtgtgaaatgtgctatatttgattacttgacttgg 479  Q
     | ||| | |||| ||||||| ||||| |||||||| |||||||||||  ||||||||||  | |||| |||||| || |   |||||||| ||||||||    
T  18118044 accgacgttcaatggtaccacgtgtatttagagtcgtgtctagaacattgcatgcacttgctattgtgagaaatgagccacgcttgattacgtgacttgg 18117945  T
Q  480 tgaaatatgtggactatgtgatttgatgaatgtcggaatatgtaaagttgtggatttgtatatgttgt-tttgatatgcttgaggaataatgttgatacg 578  Q
    |||| |||||| ||||||||| ||| ||||||| |  ||||||  |||||  || ||||||||||||| ||||||||| ||||| |||||||| |||||     
T  18117944 tgaattatgtgaactatgtga-ttggtgaatgttgatatatgtggagttgcagacttgtatatgttgtatttgatatgtttgagaaataatgtcgatact 18117846  T
Q  579 ataattcatttgaaattttgattaatattttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaa 678  Q
    | |||||||||| ||| |||| ||||  ||||||||||||||||||||||||  ||||| |||||||||  | ||||| || ||||||| |  || | |     
T  18117845 aaaattcatttggaatcttgaataat-ctttatttgattatgtttattatgtaaaatataatctaaccctcaatggtcatttggttgactgtctgtctat 18117747  T
Q  679 ttgtatgaat-ggtagacggcttgcaagattgag-tttcatttgctagtgagcttcttaaggatagcgtggagcaacctcctttctcttttgctcgagtc 776  Q
    ||||| |||| |||| ||  ||||||  ||| || |||| ||| |||||||| | ||| ||||||||||||||| |||||||||||||||||||||||||    
T  18117746 ttgtacgaatgggtacacaacttgcagaattaagttttctttttctagtgagttgcttgaggatagcgtggagctacctcctttctcttttgctcgagtc 18117647  T
Q  777 tagttaggctctgattagggtgtcag 802  Q
    | ||||||||||||||||||||||||    
T  18117646 ttgttaggctctgattagggtgtcag 18117621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 606 - 815
Target Start/End: Original strand, 18332208 - 18332417
Alignment:
Q  606 ttttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatg-gtagacggcttgcaa 704  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||| | || | ||| ||||||| ||||||| ||||||     
T  18332208 ttttatttgattatgtttattaggtggaatattatctaacacctagtggtcgtttggttgatcgcctacctatttgcatgaatgagtagacgacttgcag 18332307  T
Q  705 gattgagtttcatttgctagtgagcttcttaaggatagcgtggagcaacctcctttctcttttgctcgagtctagttaggctctgattagggtgtcaggt 804  Q
    |||||||||  ||||| ||||||| | ||| | ||||||||||||| || ||||||||||||| ||||||||||||||| |||| |||||||||||||      
T  18332308 gattgagttg-atttgatagtgagttgcttgatgatagcgtggagctacatcctttctctttttctcgagtctagttagactctaattagggtgtcagac 18332406  T
Q  805 atttatgttta 815  Q
    |||||||||||    
T  18332407 atttatgttta 18332417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 668
Target Start/End: Original strand, 23154708 - 23154769
Alignment:
Q  607 tttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgacc 668  Q
    |||||| ||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||    
T  23154708 tttattcgattatgtttattttgtagaatattatctaacccccagtggtcattcggttgacc 23154769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 668
Target Start/End: Original strand, 23565965 - 23566026
Alignment:
Q  607 tttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgacc 668  Q
    |||||| ||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||    
T  23565965 tttattcgattatgtttattttgtagaatattatctaacccccagtggtcattcggttgacc 23566026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 708
Target Start/End: Complemental strand, 27402046 - 27401947
Alignment:
Q  611 tttgattatgtttattatgtggaatattatctaacccct-agtggtcgttcggttgaccgcttgccaaattgtatgaat-ggtagacggcttgcaagatt 708  Q
    ||||||||| |||  | |||||| | ||||||||||||  |||||||||| |||||||||| |||| | |||||||||| ||||||| ||||||| ||||    
T  27402046 tttgattatattttatttgtggattgttatctaaccccccagtggtcgtttggttgaccgcctgcctatttgtatgaatgggtagacagcttgcaggatt 27401947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1924 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold1924
Description:

Target: scaffold1924; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 28 - 814
Target Start/End: Original strand, 396 - 1215
Alignment:
Q  28 gaatgaaccaatgtttgt-ggatgtttaataggttggttatcatgatgtggtcgatggtccgtctattacgtgattatgctataagaagtgaggtagttt 126  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| |  ||||| || ||||||||||| ||||||| || ||||    
T  396 gaatgagccactgtttgttggatgtttaataggttggttatcatgatgtggtcgattgtctgattattatgtaattatgctatatgaagtgatgttgttt 495  T
Q  127 ctttgtggtgatgattacttgacaattgtttctgattattgattatgaatatgtggaggtgattgcttgatgatgaatatgtagagatgatttattattt 226  Q
    |||||||||||||| ||||| |||||||||| | ||| |||||||||||||||||||| | ||| |||||||||||||||||||||| |||| | | |||    
T  496 ctttgtggtgatgaatacttaacaattgtttatcattgttgattatgaatatgtggagataattacttgatgatgaatatgtagagaagattaagtgttt 595  T
Q  227 gatgaatgctggatgtgtggatgtattgtttgataatgcaatgtg-----------gagaataggtagagtaaattggtgttgtgcattattgagttaat 315  Q
     || |||  | ||||||| |||||||||||||||||||||| |||           ||||||| | |||||| |||| ||||||||||||| |||| |||    
T  596 aat-aattgttgatgtgtagatgtattgtttgataatgcaaagtggtgaaaacgtagagaatatgaagagtatattgatgttgtgcattatcgagtcaat 694  T
Q  316 actt---------------ataagtcctatacgtggagcatatgtaaagatatgtagagggatcaatcggtaaaattacctctgacat-ccaatagtacc 399  Q
    ||||               |||||||||||| |||||| ||||      ||||||||| | ||||||| ||||||||||||||||||| ||| | |||||    
T  695 acttagcatccatgcattcataagtcctatatgtggagaatat------atatgtagacgaatcaatccgtaaaattacctctgacatcccattggtacc 788  T
Q  400 acatgtatgtagagtcgagtctagaacatcacatgcacttgaaatgtgtgaaatgtgctatatttgattacttgacttggtgaaatatgtggactatgtg 499  Q
    ||||| |||||||||| |||||||| ||| |||||||||||| || |||||||||||| |||||||||||  || |||||| ||  ||||| | | ||||    
T  789 acatgcatgtagagtcaagtctagagcattacatgcacttgagatatgtgaaatgtgccatatttgattaggtgccttggttaatgatgtgaattgtgtg 888  T
Q  500 atttgatgaatgtcggaa-tatgtaaagttgtggatttgtatatgttgtt--------ttgatatgcttgaggaataatgttgatacgataattcattt- 589  Q
    |||| |||||||| | || ||||| ||||||||||  |||||||||| ||        || |||| |||||| |||||||||||| | | |||||||||     
T  889 atttaatgaatgtggtaattatgtgaagttgtggacctgtatatgttttttggttatgttaatatacttgagaaataatgttgatgcaagaattcatttt 988  T
Q  590 --gaaattttgattaatattttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaa 687  Q
      |||   || |||| || | ||||||||||||||||||||||||||||||||||||| || |||||| ||| ||||||  | ||||| | |||||||||    
T  989 cggaatacttaattacta-tctatttgattatgtttattatgtggaatattatctaacgcccagtggttgtttggttgattgtttgcctatttgtatgaa 1087  T
Q  688 -tggtagacggcttgcaagat-tgagtttcatttgctagtgagcttcttaaggatagcgtggagcaacctcctttctcttttgctcgagtctagttaggc 785  Q
     ||||||||||||| | |||| |||||||  |||| || |||| ||||| |||||| | |||||| |||||||||||||||||||||| |||||||||||    
T  1088 ttggtagacggcttac-agatctgagttttctttgttattgagtttcttgaggatatcttggagctacctcctttctcttttgctcgaatctagttaggc 1186  T
Q  786 tctgattagggtgtcaggtatttatgttt 814  Q
    |||||||||||||||  | ||||||||||    
T  1187 tctgattagggtgtcgagcatttatgttt 1215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 7e-82; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 348 - 669
Target Start/End: Original strand, 30190742 - 30191061
Alignment:
Q  348 agatatgtagagggatcaatcggtaaaat-tacctctgacatccaatagtaccacatgtatgtagagtcgagtctagaacatcacatgcacttgaaatgt 446  Q
    ||||||||||||||||||||||||||||  |||||  |||||||||| ||| |||||| |||||||||||||||||||||||| ||||||  | ||||||    
T  30190742 agatatgtagagggatcaatcggtaaaacctaccttcgacatccaatggtatcacatgcatgtagagtcgagtctagaacatcgcatgcatataaaatgt 30190841  T
Q  447 gtgaaatgtgctatatttgattacttgacttggtgaaatatgtggactatgtgatttgatgaatgtcggaatatgtaaagttgtggatttgtatatgttg 546  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||| |||||||| ||||||||||| |  |||| |  ||||||||| |||||||| |||    
T  30190842 gtgaaatgtgccatatttaattacttgacttggtgaattatgtgggctatgtga-ttgatgaatgttgatatatatggagttgtggacttgtatattttg 30190940  T
Q  547 ttttgatatgcttgaggaataatgttgatacgataattcatttgaaattttgattaatattttatttgattatgtttattatgtggaatattatctaacc 646  Q
    | |||||||||||||| |||| ||| ||| |||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||| || |||||    
T  30190941 tattgatatgcttgagaaatattgtcgatgcgataattcatttggaatctcgattaata-tttatttgattatgtttattatgtggaatataatataacc 30191039  T
Q  647 cctagtggtcgttcggttgaccg 669  Q
     | |||||||||| |||||||||    
T  30191040 tc-agtggtcgtttggttgaccg 30191061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 30190377 - 30190626
Alignment:
Q  19 atgaaatatgaatgaaccaatgtttgtggatgtttaataggttggttatcatgatgtggtcgatggtccgtctattacgtgattatgctataagaagtga 118  Q
    |||||||| || ||| |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||| ||  |||||||| ||||| |||   |    
T  30190377 atgaaataagagtgagccaatgtttgtggatgttaaataggtgggttatcattatgtggtcgatggtacgtcttttgtgtgattatactatatgaaacaa 30190476  T
Q  119 ggtagtttctttgtggtgatgattacttgacaattgtttctgattattgattatgaatatgtggaggtgattgcttgatgatgaatatgtagagatgatt 218  Q
     || ||||||||||| |||||||||||||||| |||||| | ||| || | ||||||||||  ||| ||| ||||||||||||||  |||||||||||||    
T  30190477 tgttgtttctttgtgatgatgattacttgacagttgtttattattgttaaatatgaatatgcagagatgaatgcttgatgatgaaagtgtagagatgatt 30190576  T
Q  219 tattatttgatgaatgctggatgtgtggatgtattgtttgataatgcaat 268  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  30190577 tattatttgataaatgcttgatgtgtggatgtattgtttgataattcaat 30190626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 142 - 320
Target Start/End: Complemental strand, 26725660 - 26725479
Alignment:
Q  142 tacttgacaattgtttctgattattgattatgaatatgtggaggtgattgcttgatgatgaatatgtagagatgatttattatttgatgaatgctggatg 241  Q
    |||||||||||||||| ||||| |||||||||||||||||||| | | || ||||||||| |||||| ||||||| ||| || ||||| ||   | ||||    
T  26725660 tacttgacaattgtttatgattgttgattatgaatatgtggagttaaatgtttgatgatggatatgtggagatgaattactacttgataaaatgtcgatg 26725561  T
Q  242 tgtggatgtattg-tttgataatgca--atgtggagaataggtagagtaaattggtgttgtgcattattgagttaatactta 320  Q
    ||||||||||||| |||| |||| ||  |||||||||||  ||||||| ||||  |||| |||||||| |||| ||||||||    
T  26725560 tgtggatgtattgttttgttaatacaatatgtggagaatttgtagagtgaattattgttatgcattatcgagtcaatactta 26725479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 23596961 - 23597037
Alignment:
Q  348 agatatgtagagggatcaatcggtaaaattacctctgacatccaatagtaccacatgtatgtagagtcgagtctaga 424  Q
    |||||||||||| |||||||||||||||||||||| |||||||||| ||| |||||| ||||||||||| |||||||    
T  23596961 agatatgtagagagatcaatcggtaaaattacctccgacatccaatggtatcacatgcatgtagagtcgtgtctaga 23597037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 815
Target Start/End: Original strand, 34178825 - 34179099
Alignment:
Q  549 ttgatatgcttgaggaataatgttgatacgataattcatttgaaattttgattaatattttatttgattatgtttattatgtggaatattatctaacccc 648  Q
    |||||||| ||||| |||||||| |||| || | ||||| || ||| | ||||||| ||| ||||||||||||||||| |||||||||| ||||||||||    
T  34178825 ttgatatgtttgagaaataatgtcgatatgacagttcatgtggaatctggattaatgttt-atttgattatgtttatt-tgtggaatataatctaacccc 34178922  T
Q  649 tagtggtcgttcggttgaccgcttgccaaattgtatgaatgg-tagacggcttgcaagattgagtttcatt---------tgctagtgagcttcttaagg 738  Q
     | |||||||| | ||||||   |||| | || ||||||||| ||||||  ||||| ||||||||| | ||         || ||||||| | ||| |||    
T  34178923 -attggtcgtttgcttgaccatctgcctatttctatgaatggatagacgaattgcaggattgagttgctttgctttgctttgatagtgagttgcttgagg 34179021  T
Q  739 atagcgtggagcaacctcctttctcttttgctcgagtctagtta-ggctctgattagggtgtcaggtatttatgttta 815  Q
    |||||||| | | ||||||||||| || |||| ||||||||||| |||||||||||||||||| |  |||||||||||    
T  34179022 atagcgtgaaactacctcctttcttttctgcttgagtctagttagggctctgattagggtgtcggacatttatgttta 34179099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 621 - 713
Target Start/End: Complemental strand, 26058146 - 26058052
Alignment:
Q  621 tttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatg--gtagacggcttgcaagattgagtt 713  Q
    |||||||||||||||||||||||||||||||||||| || |||||| ||| | || | |||||| ||||  ||||||||  |||| |||||||||    
T  26058146 tttattatgtggaatattatctaacccctagtggtcatttggttgatcgcctacccatttgtataaatggtgtagacggagtgcatgattgagtt 26058052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 340 - 425
Target Start/End: Complemental strand, 26725446 - 26725360
Alignment:
Q  340 atatgtaaagatatgtagagggatcaatcggtaaaa-ttacctctgacatccaatagtaccacatgtatgtagagtcgagtctagaa 425  Q
    ||||||| | |||||||| ||||||||||  ||||| ||||||| |||||||||| |||||| ||| ||||||||||| ||||||||    
T  26725446 atatgtagaaatatgtagcgggatcaatcaataaaaattacctccgacatccaatggtaccagatgcatgtagagtcgtgtctagaa 26725360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 23596752 - 23596855
Alignment:
Q  165 ttgattatgaatatgtggaggtgattgcttgatgatgaatatgtagagatgatttattatttgatgaatgctggatgtgtggatgtattg-tttgataat 263  Q
    |||||||||||||||||||| | | || || |  |||||||||||||||| | ||||||||||||  ||| | ||||  ||||||||||| |||||||||    
T  23596752 ttgattatgaatatgtggagataaatgtttaacaatgaatatgtagagataaattattatttgatagatg-ttgatggatggatgtattgttttgataat 23596850  T
Q  264 gcaat 268  Q
    |||||    
T  23596851 gcaat 23596855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 766 - 814
Target Start/End: Original strand, 25559468 - 25559516
Alignment:
Q  766 ttgctcgagtctagttaggctctgattagggtgtcaggtatttatgttt 814  Q
    ||||||||||||||||||||||| |||||||||||  | ||||||||||    
T  25559468 ttgctcgagtctagttaggctctaattagggtgtcgagcatttatgttt 25559516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 1e-58; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 348 - 647
Target Start/End: Original strand, 13303257 - 13303552
Alignment:
Q  348 agatatgtagagggatcaatcggtaaaattacctctgacatccaatagtaccacatgtatgtagagtcgagtctagaacatcacatgcacttgaaatgtg 447  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||| ||||| |||||||||||| || || ||||||||||| || ||    
T  13303257 agatatgtagagggatcaatcggtaaaattgcttctgacatcgaatggtaccacatgcatgtatagtcgagtctagtacctcgcatgcacttgagatatg 13303356  T
Q  448 tgaaatgtgctatatttgattacttgacttggtgaaatatgtggactatgtgatttgatgaatgtcggaatatgtaaagttgtggatttgtatatgttgt 547  Q
    |||||  ||| |||||||||||  |||||||||||| ||| |||||||| ||| |||||||||||    || |||  ||||||||| |||||||||||||    
T  13303357 tgaaacatgccatatttgattatgtgacttggtgaattatatggactatttga-ttgatgaatgttaacatgtgttgagttgtgga-ttgtatatgttgt 13303454  T
Q  548 tttgatatgcttgaggaataatgttgatacgataattcatttgaaattttgattaatattttatttgattatgtttattatgtggaatattatctaaccc 647  Q
     ||||||| |||||| | |||||| |||||||||||||||||| ||| |||||| ||  |||| ||||||||||||||| ||| |||||| |||||||||    
T  13303455 attgatatccttgagaagtaatgtcgatacgataattcatttggaatcttgattgat-gtttacttgattatgtttatt-tgttgaatataatctaaccc 13303552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 617 - 690
Target Start/End: Complemental strand, 11843598 - 11843525
Alignment:
Q  617 tatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatgg 690  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||| | |||| | |||||| |||||    
T  11843598 tatgtttattatgtggaatataatctaacccctagtggtcgtttggttgaccccctgcctatttgtattaatgg 11843525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 348 - 469
Target Start/End: Original strand, 21307876 - 21307996
Alignment:
Q  348 agatatgtagagggatcaatcggtaaaattacctctgacatccaatagtaccacatgtatgtagagtcgagtctagaacatcacatgcacttgaaatgtg 447  Q
    ||||||||||| |||||||||  |||| ||||  | |||||||||| |||||||||| ||||||||||| ||||| ||||||||||||  |||| || ||    
T  21307876 agatatgtagatggatcaatcaataaagttactaccgacatccaatggtaccacatgcatgtagagtcgtgtctaaaacatcacatgc-tttgagatatg 21307974  T
Q  448 tgaaatgtgctatatttgatta 469  Q
    ||||| |||| |||||| ||||    
T  21307975 tgaaacgtgccatattttatta 21307996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 668
Target Start/End: Original strand, 15807088 - 15807128
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgacc 668  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  15807088 tgtggaatgttatctaacccctagtggtcgtttggttgacc 15807128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 13303172 - 13303221
Alignment:
Q  267 atgtggagaataggtagagtaaattggtgttgtgcattattgagttaata 316  Q
    |||||||||||| ||||||||||||| |||| |||||||| |||| ||||    
T  13303172 atgtggagaatatgtagagtaaattgttgttatgcattatcgagtcaata 13303221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 606 - 815
Target Start/End: Original strand, 13950 - 14165
Alignment:
Q  606 ttttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaat-ggtagacggcttgcaa 704  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| || |||| | |||| ||||| |||||||||||||||     
T  13950 ttttatttgattatgtttattgtgtggaatattatctaacccctagtggtcatttggttgactgcctgcctatttgtttgaatgggtagacggcttgcag 14049  T
Q  705 gattgag----tttcatttgctagtgagcttcttaaggatagcgtggagcaacctcctttctcttttgctcgagtctagtta-ggctctgattagggtgt 799  Q
    |||| ||    |||  |||| ||||||| | ||| |  |||||||||||| ||| ||||||| |||||| |||||||  ||| |||||||||||||||||    
T  14050 gatttagttgctttgctttgatagtgagttgcttgacaatagcgtggagccaccacctttcttttttgcacgagtctgattagggctctgattagggtgt 14149  T
Q  800 caggtatttatgttta 815  Q
    | |  |||||||||||    
T  14150 cggacatttatgttta 14165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 193 - 319
Target Start/End: Complemental strand, 4548867 - 4548742
Alignment:
Q  193 ttgatgatgaatatgtagagatgatttattatttgatgaatgctggatgtgtggatgtattgtttgataatgcaatgtggagaataggtagagtaaattg 292  Q
    ||||||||||||||||||||||||   ||| |||||| | || || |||||||||||||||||||||||||||||||||| ||| | |||||||||||||    
T  4548867 ttgatgatgaatatgtagagatgaccaattgtttgataattgttg-atgtgtggatgtattgtttgataatgcaatgtggtgaaaatgtagagtaaattg 4548769  T
Q  293 gtgttgtgcattattgagttaatactt 319  Q
     ||||||||||||| |||| |||||||    
T  4548768 atgttgtgcattatcgagtcaatactt 4548742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 268 - 422
Target Start/End: Complemental strand, 17142151 - 17141983
Alignment:
Q  268 tgtggagaataggtagagtaaattggtgttgtgcattattgagttaatactta---------------taagtcctatacgtggagcatatgtaaagata 352  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||               ||||  ||||| || ||| ||||| | |||||    
T  17142151 tgtggagaatatgtagagtaaattggtgttgtgcattattgagtcaatacttagcatccatgcattcataagagctatatgtagag-atatgcagagata 17142053  T
Q  353 tgtagagggatcaatcggtaaaattacctctgacatccaatagtaccacatgtatgtagagtcgagtcta 422  Q
    ||||||||||||||||  |||||||| ||| |||||||||| |||||||||| |||||||||||||||||    
T  17142052 tgtagagggatcaatcaataaaattaactccgacatccaatggtaccacatgcatgtagagtcgagtcta 17141983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 668
Target Start/End: Original strand, 22522421 - 22522483
Alignment:
Q  606 ttttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgacc 668  Q
    ||||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||    
T  22522421 ttttatttgattatgtttattatgtcgattagtatctaatccctagtggtcgttcggttgacc 22522483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 628 - 739
Target Start/End: Complemental strand, 17910267 - 17910155
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatg-gtagacggcttgcaagattgagtttcatttgctagtg 726  Q
    |||||||||| ||||| |||| |||||||||| |||||||||  |||| | ||||||||||| |||||||||||||| || ||| || | |||||| |||    
T  17910267 tgtggaatataatctagccccaagtggtcgtttggttgaccgtctgcctatttgtatgaatgagtagacggcttgcaggagtgatttgcttttgcttgtg 17910168  T
Q  727 agcttcttaagga 739  Q
    || ||||| ||||    
T  17910167 agtttcttgagga 17910155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 45342118 - 45342039
Alignment:
Q  350 atatgtagagggatcaatcggtaaaattacctctgacatcca-atagtaccacatgtatgtagagtcgagtctagaacat 428  Q
    ||||||||||||||  ||  |||||||||||||||||||||| || |||||||||| ||||||||||  |||||||||||    
T  45342118 atatgtagagggattgataagtaaaattacctctgacatccagatggtaccacatgcatgtagagtcatgtctagaacat 45342039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 621 - 698
Target Start/End: Original strand, 17999842 - 17999920
Alignment:
Q  621 tttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaat-ggtagacggc 698  Q
    ||||||| |||||||||||||||||||  |||||||||| |||||| ||| |||| | |||||||||| ||||||||||    
T  17999842 tttattacgtggaatattatctaaccctcagtggtcgtttggttgatcgcctgcctatttgtatgaatgggtagacggc 17999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 606 - 667
Target Start/End: Original strand, 14280314 - 14280375
Alignment:
Q  606 ttttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgac 667  Q
    |||||||| ||||||||||||  |||||||||||||||||||  |||||||||| |||||||    
T  14280314 ttttatttaattatgtttatttcgtggaatattatctaaccctcagtggtcgttgggttgac 14280375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 45342274 - 45342200
Alignment:
Q  193 ttgatgatgaatatgtagagatgatttattatttgatgaatgctggatgtgtggatgtattgtttgataatgcaatgtgga 273  Q
    |||||||||||||||||||||||| |    |||||||||||| || |||| |||||||||||||| |||||||||||||||    
T  45342274 ttgatgatgaatatgtagagatgaat----atttgatgaatgttg-atgt-tggatgtattgtttaataatgcaatgtgga 45342200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 670
Target Start/End: Complemental strand, 4548331 - 4548266
Alignment:
Q  606 ttttatttgattatgtt-tattatgtggaatattatctaacccctagtggtcgttcggttgaccgc 670  Q
    |||| ||||||||| || |||||||||||||||||||| ||||||| | |||||| ||||||||||    
T  4548331 ttttctttgattatattgtattatgtggaatattatctcacccctaatagtcgtttggttgaccgc 4548266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 644 - 708
Target Start/End: Complemental strand, 8250292 - 8250227
Alignment:
Q  644 acccctagtggtcgttcggttgaccgcttgccaaattgtatgaat-ggtagacggcttgcaagatt 708  Q
    ||||||||| |||||| |||||||||| |||| | |||||||||| ||||||| ||||||||||||    
T  8250292 acccctagtcgtcgtttggttgaccgcctgcctatttgtatgaatgggtagacagcttgcaagatt 8250227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 763 - 815
Target Start/End: Original strand, 12396018 - 12396071
Alignment:
Q  763 cttttgctcga-gtctagttaggctctgattagggtgtcaggtatttatgttta 815  Q
    ||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  12396018 cttttgctcgaagtctagttaggctctgattagagtgtcagacatttatgttta 12396071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 668
Target Start/End: Original strand, 6461693 - 6461733
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgacc 668  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  6461693 tgtggaatataatctaacctctagtggtcgttcggttgacc 6461733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 667
Target Start/End: Complemental strand, 19311333 - 19311298
Alignment:
Q  632 gaatattatctaacccctagtggtcgttcggttgac 667  Q
    |||||||||||||||||||||||||||| |||||||    
T  19311333 gaatattatctaacccctagtggtcgtttggttgac 19311298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 690
Target Start/End: Original strand, 15817846 - 15817908
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatgg 690  Q
    ||||||||||||||||||| | |||||||||| |||||||||  |||| | ||| ||||||||    
T  15817846 tgtggaatattatctaacctccagtggtcgtttggttgaccgtctgcctatttgaatgaatgg 15817908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 690
Target Start/End: Complemental strand, 26426872 - 26426811
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatgg 690  Q
    |||||||||||||||||| | ||||||||||| |||||||||  |||| | ||||||||||||    
T  26426872 tgtggaatattatctaactc-tagtggtcgtttggttgaccgtctgcctatttgtatgaatgg 26426811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 365 - 441
Target Start/End: Complemental strand, 4548691 - 4548614
Alignment:
Q  365 aatcggtaaaattacctctgacatccaa-tagtaccacatgtatgtagagtcgagtctagaacatcacatgcacttga 441  Q
    ||||||||||||||| || |||||||||   |||||||||| ||||||| ||| |||||||  || ||||||||||||    
T  4548691 aatcggtaaaattacatccgacatccaaccggtaccacatgcatgtagactcgtgtctagagtattacatgcacttga 4548614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 668
Target Start/End: Complemental strand, 13487242 - 13487185
Alignment:
Q  611 tttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgacc 668  Q
    ||||||||||||||| |||| || || ||||||||||| ||||||| || ||||||||    
T  13487242 tttgattatgtttatcatgtagattagtatctaacccccagtggtcatttggttgacc 13487185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 612 - 815
Target Start/End: Complemental strand, 46546 - 46338
Alignment:
Q  612 ttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatgg-tagacggcttgcaagattga 710  Q
    |||||||||||||||  ||||||||||||||||||  ||||||||||| |||| |   | |||  | ||||| | |||| |||||  |||||| |||| |    
T  46546 ttgattatgtttatttggtggaatattatctaaccggtagtggtcgtttggttaagtccctgcttatttgtaggcatgggtagacatcttgcaggattaa 46447  T
Q  711 gtt----tcatttgctagtgagcttcttaaggatagcgtggagcaacctcctttctcttttgctcgagtctagttaggctctgattagggtgtcaggtat 806  Q
    |||    |  |||||||||||| | ||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||  ||    
T  46446 gttgttttgctttgctagtgagttgcttaaggatggcggggagctacatcctttctcttttgctcgagtctagttaggctctgattaggatgtcagacat 46347  T
Q  807 ttatgttta 815  Q
    |||||||||    
T  46346 ttatgttta 46338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 6e-24; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 350 - 490
Target Start/End: Original strand, 24819649 - 24819790
Alignment:
Q  350 atatgtagagggatcaatcggtaaaattacctctgacatccaa-tagtaccacatgtatgtagagtcgagtctagaacatcacatgcacttgaaatgtgt 448  Q
    |||||||||||||||||| || ||||||||||| |||||  || | |||||||||| ||| ||||||| ||||||| ||| |||||||| ||| ||||||    
T  24819649 atatgtagagggatcaattggcaaaattacctccgacatggaaatggtaccacatgcatgcagagtcgtgtctagaccattacatgcacatgagatgtgt 24819748  T
Q  449 gaaatgtgctatatttgattacttgacttggtgaaatatgtg 490  Q
    ||||||||  |||||||||||  ||||||| |||| ||||||    
T  24819749 gaaatgtgtcatatttgattatatgacttgatgaattatgtg 24819790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 691
Target Start/End: Complemental strand, 24270363 - 24270297
Alignment:
Q  625 ttatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatggt 691  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||| |||| | ||||| |||||||    
T  24270363 ttatgtagaatattatctaacccccagtggtcgtttggttgaccgcctgcctatttgtacgaatggt 24270297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 607 - 691
Target Start/End: Complemental strand, 16216124 - 16216039
Alignment:
Q  607 tttatttgattatgt-ttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatggt 691  Q
    ||||||||||||| | |||||||||||||||| |||||||| | |||||||||| |||||| ||| |||  | |||||||||||||    
T  16216124 tttatttgattatatgttattatgtggaatataatctaacctccagtggtcgtttggttgatcgcctgctcatttgtatgaatggt 16216039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 621 - 713
Target Start/End: Complemental strand, 15062086 - 15061992
Alignment:
Q  621 tttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatg--gtagacggcttgcaagattgagtt 713  Q
    ||||||||||||||||||||||||||   |||||| ||| |||||||||| | || | |||||||||||  ||||||| | |||| |||||||||    
T  15062086 tttattatgtggaatattatctaaccttcagtggttgtttggttgaccgcctacccatttgtatgaatggtgtagacgacgtgcatgattgagtt 15061992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 762 - 815
Target Start/End: Original strand, 24062399 - 24062452
Alignment:
Q  762 tcttttgctcgagtctagttaggctctgattagggtgtcaggtatttatgttta 815  Q
    ||||||||| ||||||||||| |||||||||||||| ||||  |||||||||||    
T  24062399 tcttttgctagagtctagttaagctctgattagggtatcagacatttatgttta 24062452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 670
Target Start/End: Original strand, 24820048 - 24820097
Alignment:
Q  621 tttattatgtggaatattatctaacccctagtggtcgttcggttgaccgc 670  Q
    |||| |||||||||||||||||||| |||||| |||||| ||||||||||    
T  24820048 tttactatgtggaatattatctaactcctagttgtcgtttggttgaccgc 24820097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 287
Target Start/End: Original strand, 24819438 - 24819558
Alignment:
Q  165 ttgattatgaatatgtggaggtgattgcttgatgatgaatatgtagagatgatttattatttgatg--aatgctggatgtgtggatgtattgtttgataa 262  Q
    ||||| |||||||||| ||| ||| | |||||| || ||||||||||||||||| |||    ||||  |||  | ||||| |||||||||||||||||||    
T  24819438 ttgatgatgaatatgtagagatgaatacttgataataaatatgtagagatgattaatt----gatggtaattattgatgtatggatgtattgtttgataa 24819533  T
Q  263 tgcaatgtggagaataggtagagta 287  Q
    ||||| ||||  || ||||||||||    
T  24819534 tgcaacgtggtaaaaaggtagagta 24819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 1686828 - 1686886
Alignment:
Q  123 gtttctttgtggtgatgattacttgacaattgttt-ctgattattgattatgaatatgt 180  Q
    |||||||||||||||| |||| |||| ||||||||  ||||||||||| ||||||||||    
T  1686828 gtttctttgtggtgattattaattgataattgtttgatgattattgatgatgaatatgt 1686886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 417
Target Start/End: Original strand, 1687056 - 1687144
Alignment:
Q  333 gtggagcatatgtaaaga-tatgtagagggatcaatcggtaaaat---tacctctgacatccaatagtaccacatgtatgtagagtcga 417  Q
    |||||| ||||||| ||| |||||| ||||| |||||||||||||   |||||| ||| |||||| | |||||||| ||||||||||||    
T  1687056 gtggagaatatgtagagaatatgtaaagggagcaatcggtaaaataattacctccgacctccaatggcaccacatgcatgtagagtcga 1687144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 17124633 - 17124552
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaat-ggtagacggcttgcaagatt 708  Q
    |||||||| |||||||||||||||| ||| || ||||||| |  |||| | |||||||||| |||||||||| |||| ||||    
T  17124633 tgtggaatgttatctaacccctagttgtcatttggttgactgtctgcctatttgtatgaatgggtagacggcgtgcaggatt 17124552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 21746760 - 21746876
Alignment:
Q  87 cgtctattacgtgattatgctataagaagtgaggtagtttctttgtggtgatgattacttgacaattgtttctgattattgattatgaatatgtggaggt 186  Q
    ||||||||| |||||||||||||| |||| || || |||||||||| || |||||||||| |||||||||| ||| | |||||||| ||||||||||| |    
T  21746760 cgtctattatgtgattatgctatatgaagcgatgttgtttctttgtagttatgattacttaacaattgtttatgaatgttgattatcaatatgtggagat 21746859  T
Q  187 gattgcttgatgatgaa 203  Q
     ||||||||||| ||||    
T  21746860 aattgcttgatggtgaa 21746876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 802
Target Start/End: Original strand, 14487418 - 14487594
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatgg-tagacggcttgcaagattgagtttcat-ttgctagt 725  Q
    |||| ||||||||||||| |||||||| | || |||| ||||| | || | |||||||||||| |||||||| |||| || ||| |  | | ||||| ||    
T  14487418 tgtgaaatattatctaactcctagtggccatttggttaaccgcctacctatttgtatgaatgggtagacggcgtgcaggactga-taacttattgcttgt 14487516  T
Q  726 gagcttcttaaggat-agcgtggagcaacctcctttctcttttgctcga-gtctagttaggctctgattagggtgtcag 802  Q
    ||| | ||| ||||| ||| |||||| ||||| ||| |||||||||||| |||||||||||||||||||||||||||||    
T  14487517 gagttgcttgaggattagcttggagctacctcgttt-tcttttgctcgaagtctagttaggctctgattagggtgtcag 14487594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 621 - 691
Target Start/End: Original strand, 12331831 - 12331900
Alignment:
Q  621 tttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatggt 691  Q
    ||||||||||||||||| |||||||||| ||||||||||  ||||||||| | || | |||||||||||||    
T  12331831 tttattatgtggaatataatctaacccc-agtggtcgtttagttgaccgcctacccatttgtatgaatggt 12331900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 668
Target Start/End: Original strand, 23090623 - 23090662
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgacc 668  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  23090623 tgtggaatattatctaacccct-gtggtcgttcggttgacc 23090662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 675
Target Start/End: Complemental strand, 6777754 - 6777711
Alignment:
Q  632 gaatattatctaacccctagtggtcgttcggttgaccgcttgcc 675  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||    
T  6777754 gaatgttatctaacccctagtggtcgttcagttgaccgcctgcc 6777711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 319
Target Start/End: Complemental strand, 14633818 - 14633654
Alignment:
Q  165 ttgattatgaatatgtggaggtgattgcttgatgatgaatatgtagagatgatttattatttgatgaatgctggatgtgtggatgtattgtttgataatg 264  Q
    ||||| ||| |||||||||| | |||  |||||||| ||||||||||||||| | | |  ||||| | || || |||||||||||||||||||||||||     
T  14633818 ttgatgatggatatgtggagattattatttgatgattaatatgtagagatgactaaatggttgataattgttg-atgtgtggatgtattgtttgataatt 14633720  T
Q  265 ca-----------atgtggagaataggtagagtaaattggtgttgtgcattattgagttaatactt 319  Q
    ||           |||||||||||| ||||||||||||  ||||||| ||||| |||| |||||||    
T  14633719 catagtggtgcaaatgtggagaatatgtagagtaaatttatgttgtggattatcgagtcaatactt 14633654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 675
Target Start/End: Complemental strand, 17912787 - 17912740
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgaccgcttgcc 675  Q
    ||||||||||  |||||||||||||||| ||| |||||||||||||||    
T  17912787 tgtggaatatattctaacccctagtggttgtttggttgaccgcttgcc 17912740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 378
Target Start/End: Complemental strand, 14633625 - 14633579
Alignment:
Q  333 gtggagcatatgtaaag-atatgtagagggatcaatcggtaaaatta 378  Q
    |||||| ||||||| || |||||||||||||||||||||||||||||    
T  14633625 gtggagaatatgtatagcatatgtagagggatcaatcggtaaaatta 14633579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 606 - 815
Target Start/End: Original strand, 11317 - 11536
Alignment:
Q  606 ttttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaat-ggtagacggcttgcaa 704  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||| |||| ||||| |||||||| | |||| | || ||||||| |||| ||||||||||     
T  11317 ttttatttgattatgtttattgtgtggaatactatttaacccccagtgatcgtttggttgaccacctgcctatttatatgaatgggtatacggcttgcag 11416  T
Q  705 gattgagtttcat--------ttgctagtgagcttcttaaggatagcgtggagcaacctcctttctcttttgctcgagtctagt-taggctctgattagg 795  Q
    |||| |||| | |        ||||||||||| | ||| ||||||||||||||  ||||| ||||||||||| ||  ||||||| || | ||| ||||||    
T  11417 gattaagttgctttgctttgattgctagtgagttgcttgaggatagcgtggaggtacctcatttctcttttggtcacgtctagtctaagatctcattagg 11516  T
Q  796 gtgtcaggtatttatgttta 815  Q
    ||||  || |||||||||||    
T  11517 gtgttgggcatttatgttta 11536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 607 - 690
Target Start/End: Complemental strand, 28664 - 28582
Alignment:
Q  607 tttatttgattatgtttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatgg 690  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||||||||| |||||| ||| |||| | ||||||||||||    
T  28664 tttatttgattatgtttattatgtggattaatatctaacccc-agtggtcgtttggttgatcgcctgcctatttgtatgaatgg 28582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 48; Significance: 5e-18; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 350 - 452
Target Start/End: Original strand, 70951 - 71054
Alignment:
Q  350 atatgtagagggatcaatcggtaaaattacctctgacatccaa-tagtaccacatgtatgtagagtcgagtctagaacatcacatgcacttgaaatgtgt 448  Q
    |||||||| ||||| |||||||||||||||||| ||| || || | ||| |||||| ||||||||||||||||||| ||| |||||||| ||| ||||||    
T  70951 atatgtagtgggataaatcggtaaaattacctccgacgtctaaattgtatcacatgcatgtagagtcgagtctagagcattacatgcacatgagatgtgt 71050  T
Q  449 gaaa 452  Q
    ||||    
T  71051 gaaa 71054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 622 - 670
Target Start/End: Original strand, 71323 - 71371
Alignment:
Q  622 ttattatgtggaatattatctaacccctagtggtcgttcggttgaccgc 670  Q
    ||||||||||||||||||||||||||  | |||||||| ||||||||||    
T  71323 ttattatgtggaatattatctaaccctcactggtcgtttggttgaccgc 71371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 238 - 272
Target Start/End: Original strand, 70838 - 70872
Alignment:
Q  238 gatgtgtggatgtattgtttgataatgcaatgtgg 272  Q
    |||||| ||||||||||||||||||||||||||||    
T  70838 gatgtgaggatgtattgtttgataatgcaatgtgg 70872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 3e-16; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 350 - 489
Target Start/End: Original strand, 25386659 - 25386799
Alignment:
Q  350 atatgtagagggatcaatcggtaaaattacctctgacatccaatag-taccacatgtatgtagagtcgagtctagaacatcacatgcacttgaaatgtgt 448  Q
    ||||||||||| ||| ||||||||||||||||| || || |||| | ||||||||| ||||| ||||||||||||| ||| |||||| | |||  | |||    
T  25386659 atatgtagaggaatcgatcggtaaaattacctccgaaattcaattggtaccacatgcatgtaaagtcgagtctagagcattacatgcgcatgagttatgt 25386758  T
Q  449 gaaatgtgctatatttgattacttgacttggtgaaatatgt 489  Q
    |||| |||  ||| |||||||  |||||||||||| |||||    
T  25386759 gaaacgtgacatacttgattatgtgacttggtgaattatgt 25386799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 261
Target Start/End: Original strand, 14306176 - 14306248
Alignment:
Q  188 attgcttgatgatgaatatgtagagatgatttattatttgatgaatgctggatgtgtggatgtattgtttgata 261  Q
    ||||||||||||||||||||||||||||||| | |||||||| | || | ||||| ||||||||||||| ||||    
T  14306176 attgcttgatgatgaatatgtagagatgattaagtatttgat-actgattgatgtatggatgtattgttcgata 14306248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 621 - 691
Target Start/End: Complemental strand, 2278533 - 2278463
Alignment:
Q  621 tttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatggt 691  Q
    ||||||| |||||||||||||||||||||||||||| ||  ||| | ||||| || | |||||||||||||    
T  2278533 tttattacgtggaatattatctaacccctagtggtcatttagttaatcgcttacccatttgtatgaatggt 2278463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 610 - 706
Target Start/End: Original strand, 19978654 - 19978752
Alignment:
Q  610 atttgattatgtttatt-atgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaa-tggtagacggcttgcaaga 706  Q
    ||||||||||| ||||| ||||||||||| || ||||| | |||||||||| |||||||||  |||| | ||||||||| ||||||||| | |||||||    
T  19978654 atttgattatgcttatttatgtggaatataatataacctccagtggtcgtttggttgaccgtctgcctatttgtatgaattggtagacgacgtgcaaga 19978752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 703
Target Start/End: Original strand, 30084123 - 30084220
Alignment:
Q  607 tttatttgattatg-tttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaat-ggtagacggcttgca 703  Q
    |||||||||||||  |||||||||||||||||||||||| || |||||||||||  |||||| || |||| | || ||||||| |||||||||| ||||    
T  30084123 tttatttgattatactttattatgtggaatattatctaa-ccttagtggtcgtttcgttgactgcctgcctatttttatgaatgggtagacggcgtgca 30084220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 365 - 423
Target Start/End: Original strand, 40354903 - 40354961
Alignment:
Q  365 aatcggtaaaattacctctgacatccaatagtaccacatgtatgtagagtcgagtctag 423  Q
    |||||||||||||||||| |||||||| |  ||||||||| ||||||||||| ||||||    
T  40354903 aatcggtaaaattacctccgacatccattgataccacatgcatgtagagtcgtgtctag 40354961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 282 - 319
Target Start/End: Original strand, 29650731 - 29650768
Alignment:
Q  282 agagtaaattggtgttgtgcattattgagttaatactt 319  Q
    |||||||||||||||||||||||||||||| |||||||    
T  29650731 agagtaaattggtgttgtgcattattgagtcaatactt 29650768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 668
Target Start/End: Complemental strand, 17385113 - 17385073
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgacc 668  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  17385113 tgtggaatataatttaacccctagtggtcgttcggttgacc 17385073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 667
Target Start/End: Complemental strand, 6808683 - 6808644
Alignment:
Q  628 tgtggaatattatctaacccctagtggtcgttcggttgac 667  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  6808683 tgtggaatattgtctaacccctagtggtcgtttggttgac 6808644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 14306105 - 14306175
Alignment:
Q  87 cgtctattacgtgattatgctataagaagtgaggtagtttctttgtggtgatgattacttgacaattgttt 157  Q
    ||||||||| |||||| ||||||| |||   | || ||||||||||| |||||||| ||||||||||||||    
T  14306105 cgtctattatgtgattgtgctatatgaaacaatgtcgtttctttgtgatgatgatttcttgacaattgttt 14306175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 238 - 272
Target Start/End: Original strand, 25386520 - 25386554
Alignment:
Q  238 gatgtgtggatgtattgtttgataatgcaatgtgg 272  Q
    |||||||||||||| ||||||||||||||||||||    
T  25386520 gatgtgtggatgtaatgtttgataatgcaatgtgg 25386554  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 763 - 799
Target Start/End: Original strand, 30177699 - 30177736
Alignment:
Q  763 cttttgctcga-gtctagttaggctctgattagggtgt 799  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  30177699 cttttgctcgaagtctagttaggctctgattagggtgt 30177736  T

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Target: scaffold0338 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 621 - 713
Target Start/End: Original strand, 18581 - 18675
Alignment:
Q  621 tttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatg--gtagacggcttgcaagattgagtt 713  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||||  | || | |||||||||||  ||| ||||| |||| |||||||||    
T  18581 tttattatgtggaatattatctaaccctcagtggtcgtttggttgaccgtctacccatttgtatgaatggtgtaaacggcgtgcatgattgagtt 18675  T

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Target: scaffold0171 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 710
Target Start/End: Complemental strand, 2925 - 2834
Alignment:
Q  621 tttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatgg--tagacggcttgcaagattga 710  Q
    ||||||||||||||||||  ||||||||||| ||||||| |||||||| | | || | ||||||||||||  || ||||| |||||||||||    
T  2925 tttattatgtggaatattgcctaacccctagaggtcgtttggttgaccacctacccatttgtatgaatggtatatacggcgtgcaagattga 2834  T

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Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 3685 - 3608
Alignment:
Q  19 atgaaatatgaatgaaccaatgtttg-tggatgtttaataggttggttatcatgatgtggtcgatggtccgtctatta 95  Q
    |||||||| ||||||| ||||| ||| ||| ||| ||||| |||| ||||||||||||||||||| ||  ||||||||    
T  3685 atgaaataagaatgaatcaatgattgatgggtgtataatatgttgtttatcatgatgtggtcgattgtatgtctatta 3608  T

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Target: scaffold0299 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 669
Target Start/End: Original strand, 10435 - 10472
Alignment:
Q  632 gaatattatctaacccctagtggtcgttcggttgaccg 669  Q
    |||| |||||||||||||||||||||||||||||||||    
T  10435 gaatgttatctaacccctagtggtcgttcggttgaccg 10472  T

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Target: scaffold0613 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0613
Description:

Target: scaffold0613; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 610 - 710
Target Start/End: Original strand, 2906 - 3009
Alignment:
Q  610 atttgattatgtttattat--gtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaat-ggtagacggcttgcaaga 706  Q
    |||||||||| | ||||||  ||||||||| |||||| ||| ||||||| || |||||||||| | || | |||||||||| |||||||||| |||| ||    
T  2906 atttgattatatatattatttgtggaatataatctaatccccagtggtcatttggttgaccgcctacctatttgtatgaatgggtagacggcatgcagga 3005  T
Q  707 ttga 710  Q
    ||||    
T  3006 ttga 3009  T

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Target: scaffold0115 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 689
Target Start/End: Original strand, 41392 - 41451
Alignment:
Q  630 tggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatg 689  Q
    |||||||| ||||||||| ||||||||||| |||||||||| || | | |||||||||||    
T  41392 tggaatataatctaacccgtagtggtcgtttggttgaccgcctgtctatttgtatgaatg 41451  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 728
Target Start/End: Complemental strand, 201888 - 201790
Alignment:
Q  630 tggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatg-gtagacggcttgcaagattgagtttcatttgctagtgag 728  Q
    ||||||| ||||||||||| |||||||||| |||||||| | |||| | ||||||||||| ||||||  |||||| |||||| || | |||||| |||||    
T  201888 tggaatactatctaacccc-agtggtcgtttggttgaccacctgcctatttgtatgaatgagtagacaacttgcatgattgatttgcttttgcttgtgag 201790  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 621 - 691
Target Start/End: Original strand, 24229 - 24299
Alignment:
Q  621 tttattatgtggaatattatctaacccctagtggtcgttcggttgaccgcttgccaaattgtatgaatggt 691  Q
    ||||||||||| ||| |||||||||||  |||||| ||| |||||||||| | || | |||||||||||||    
T  24229 tttattatgtgaaatgttatctaaccctcagtggttgtttggttgaccgcctacccatttgtatgaatggt 24299  T

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