View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4886-Insertion-10 (Length: 324)
Name: NF4886-Insertion-10
Description: NF4886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4886-Insertion-10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 8 - 324
Target Start/End: Complemental strand, 33308438 - 33308122
Alignment:
| Q |
8 |
tccttccagaagtgtaagaatgcccaaatttggtttcttagttgctttatatgctttgcataaaagggaagatttgctaagcgaacaggtgctcgctgag |
107 |
Q |
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| T |
33308438 |
tccttccagaagtgtaagaatgcccaaatttggtttctgagttgctttatatgctttgcataaaagggaagatttgctaagcgaacaggtgctcgctgag |
33308339 |
T |
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| Q |
108 |
gtttcttcaatgtgaagtaatttcgaactaatacaacatgtcactaatgttgccttaaagtgaatcgatgcttgcttagtgaatcaactcttgcaatcca |
207 |
Q |
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| T |
33308338 |
gtttcttcaatgtgaagtaatttccaactaatacaacatgtcactaatgttgccttaaagtgaatcgatgcttgcttagtgaatcaactcttgcaatcca |
33308239 |
T |
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| Q |
208 |
ccttttaacttgctgatttggctcgctttgggctcacctagcgaattggcttttactaatttcctcaaatttccaacttggatcgctattggcctgattc |
307 |
Q |
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| T |
33308238 |
ccttttaactcgctgatttggctcgctttgggctcacctagcgaattggcttttactaatttcctcaaatttctaacttggatcgctattggcctgattc |
33308139 |
T |
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| Q |
308 |
ttgggagtaattcttgg |
324 |
Q |
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| T |
33308138 |
tcgggagtaattcttgg |
33308122 |
T |
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