View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4886-Insertion-13 (Length: 228)
Name: NF4886-Insertion-13
Description: NF4886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4886-Insertion-13 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 36738377 - 36738157
Alignment:
| Q |
8 |
aaactttacctcaagtgatttgcttagatagaaagcattatcccacacccaaaaaatgaaataactccccaatatttttgtttgtattttaaggtaaaga |
107 |
Q |
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| T |
36738377 |
aaactttacctcaagtgatttgcttagatagaaagcattatcccacacccaaaaaatgaaataactccccaatatttttgtttgtattttaaggtaaaga |
36738278 |
T |
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| Q |
108 |
tgggttctccttttaaacacaagtttaggtcactctctagtctatttagtacaaaatatatgtttctctctatgttcttaatcattttatggcatcgtaa |
207 |
Q |
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| T |
36738277 |
tgggttctccttttaaacacaagtttaggtcactctctagtctatttagtacaaaatatatgtttctctctatgttcttaatcattttatggcatcgtat |
36738178 |
T |
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| Q |
208 |
cctaatgtttgagctctcaca |
228 |
Q |
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| T |
36738177 |
cctaatgtttgagctctcaca |
36738157 |
T |
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