View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4886-Insertion-8 (Length: 424)

Name: NF4886-Insertion-8
Description: NF4886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4886-Insertion-8
NF4886-Insertion-8
[»] chr2 (14 HSPs)
chr2 (167-423)||(34475808-34476065)
chr2 (82-137)||(34476081-34476136)
chr2 (7-46)||(42445362-42445401)
chr2 (7-41)||(17799113-17799147)
chr2 (318-374)||(8411141-8411197)
chr2 (7-39)||(35699136-35699168)
chr2 (7-37)||(315017-315047)
chr2 (7-41)||(1467092-1467126)
chr2 (7-37)||(11362560-11362590)
chr2 (7-40)||(30218990-30219023)
chr2 (7-39)||(8739113-8739145)
chr2 (7-39)||(23000793-23000825)
chr2 (7-43)||(36589996-36590032)
chr2 (7-39)||(40493929-40493961)
[»] chr8 (16 HSPs)
chr8 (7-47)||(27822864-27822904)
chr8 (7-39)||(37953657-37953689)
chr8 (7-38)||(20283814-20283845)
chr8 (7-38)||(21070442-21070473)
chr8 (7-38)||(41574436-41574467)
chr8 (7-37)||(1985853-1985883)
chr8 (7-37)||(4147068-4147098)
chr8 (7-37)||(37277744-37277774)
chr8 (7-37)||(41015075-41015105)
chr8 (7-37)||(44886188-44886218)
chr8 (7-40)||(8870255-8870288)
chr8 (7-44)||(30359126-30359163)
chr8 (7-40)||(32318790-32318823)
chr8 (7-39)||(2321513-2321545)
chr8 (7-43)||(15187921-15187957)
chr8 (7-43)||(37953367-37953403)
[»] chr7 (19 HSPs)
chr7 (7-46)||(19778264-19778303)
chr7 (314-383)||(773343-773412)
chr7 (7-38)||(228242-228273)
chr7 (7-38)||(36376346-36376377)
chr7 (7-46)||(46622544-46622583)
chr7 (7-38)||(48871372-48871403)
chr7 (7-41)||(11900334-11900368)
chr7 (7-40)||(5181715-5181748)
chr7 (7-36)||(18295852-18295881)
chr7 (7-40)||(19194156-19194189)
chr7 (7-44)||(23909887-23909924)
chr7 (7-40)||(25683959-25683992)
chr7 (7-36)||(35711942-35711971)
chr7 (7-40)||(44189668-44189701)
chr7 (7-35)||(3931778-3931806)
chr7 (7-39)||(18363578-18363610)
chr7 (7-39)||(18798027-18798059)
chr7 (7-39)||(18852492-18852524)
chr7 (7-43)||(21202886-21202922)
[»] chr1 (18 HSPs)
chr1 (7-45)||(52233422-52233460)
chr1 (7-39)||(40355845-40355877)
chr1 (7-47)||(45664424-45664464)
chr1 (7-38)||(8535800-8535831)
chr1 (7-38)||(8601039-8601070)
chr1 (7-38)||(11204783-11204814)
chr1 (7-38)||(36230550-36230581)
chr1 (7-37)||(32558211-32558241)
chr1 (7-36)||(9517530-9517559)
chr1 (7-44)||(19830395-19830432)
chr1 (7-40)||(20017661-20017694)
chr1 (7-40)||(26861270-26861303)
chr1 (7-40)||(29794689-29794722)
chr1 (7-36)||(52143165-52143194)
chr1 (7-39)||(14460586-14460618)
chr1 (7-39)||(27396810-27396842)
chr1 (7-39)||(36139363-36139395)
chr1 (7-47)||(37029212-37029252)
[»] chr6 (9 HSPs)
chr6 (291-384)||(12209369-12209462)
chr6 (7-39)||(9703828-9703860)
chr6 (7-38)||(10255804-10255835)
chr6 (7-37)||(15273263-15273293)
chr6 (7-36)||(3535063-3535092)
chr6 (7-44)||(4037030-4037067)
chr6 (7-39)||(11745995-11746027)
chr6 (7-39)||(20080115-20080147)
chr6 (7-39)||(27765255-27765287)
[»] chr5 (19 HSPs)
chr5 (7-40)||(16859954-16859987)
chr5 (7-39)||(26151791-26151823)
chr5 (7-39)||(28251662-28251694)
chr5 (7-46)||(28620029-28620068)
chr5 (7-46)||(40687656-40687695)
chr5 (7-37)||(1055370-1055400)
chr5 (7-37)||(5891764-5891794)
chr5 (7-37)||(19849551-19849581)
chr5 (7-37)||(25566826-25566856)
chr5 (7-37)||(29183132-29183162)
chr5 (7-40)||(2710336-2710369)
chr5 (7-36)||(4096452-4096481)
chr5 (7-40)||(5088356-5088389)
chr5 (7-40)||(13765545-13765578)
chr5 (7-40)||(14514968-14515001)
chr5 (7-36)||(27264389-27264418)
chr5 (7-39)||(2710621-2710653)
chr5 (7-39)||(40768172-40768204)
chr5 (7-39)||(41140398-41140430)
[»] chr4 (21 HSPs)
chr4 (7-40)||(30998468-30998501)
chr4 (7-46)||(12640810-12640849)
chr4 (7-38)||(17554043-17554074)
chr4 (7-46)||(31843777-31843816)
chr4 (7-37)||(19869442-19869472)
chr4 (7-37)||(23770051-23770081)
chr4 (7-41)||(24543027-24543061)
chr4 (7-37)||(29432046-29432076)
chr4 (7-41)||(33338314-33338348)
chr4 (7-37)||(34957641-34957671)
chr4 (7-37)||(37973512-37973542)
chr4 (7-40)||(7396137-7396170)
chr4 (299-384)||(20293551-20293636)
chr4 (7-36)||(20472549-20472578)
chr4 (7-40)||(44921894-44921927)
chr4 (7-47)||(6386720-6386760)
chr4 (7-35)||(18994668-18994696)
chr4 (7-47)||(34158757-34158797)
chr4 (7-39)||(34362817-34362849)
chr4 (7-39)||(39136581-39136613)
chr4 (7-39)||(45289784-45289816)
[»] chr3 (17 HSPs)
chr3 (7-38)||(8728196-8728227)
chr3 (7-38)||(9080083-9080114)
chr3 (7-42)||(33621860-33621895)
chr3 (7-45)||(19914756-19914794)
chr3 (7-37)||(33252769-33252799)
chr3 (7-37)||(53422088-53422118)
chr3 (7-41)||(53531801-53531835)
chr3 (7-40)||(33576403-33576436)
chr3 (7-40)||(39708006-39708039)
chr3 (7-40)||(50033525-50033558)
chr3 (7-40)||(52916855-52916888)
chr3 (7-39)||(5153778-5153810)
chr3 (7-47)||(12881499-12881539)
chr3 (7-39)||(32205131-32205163)
chr3 (7-47)||(40082474-40082514)
chr3 (7-39)||(42465688-42465720)
chr3 (7-39)||(45743896-45743928)
[»] scaffold0283 (1 HSPs)
scaffold0283 (7-37)||(1183-1213)
[»] scaffold0951 (1 HSPs)
scaffold0951 (7-36)||(3705-3734)
[»] scaffold0594 (1 HSPs)
scaffold0594 (7-40)||(5588-5621)
[»] scaffold0182 (1 HSPs)
scaffold0182 (7-40)||(20591-20624)
[»] scaffold0122 (1 HSPs)
scaffold0122 (7-40)||(29646-29679)
[»] scaffold0022 (1 HSPs)
scaffold0022 (7-36)||(139458-139487)
[»] scaffold0014 (1 HSPs)
scaffold0014 (7-40)||(78986-79019)


Alignment Details
Target: chr2 (Bit Score: 121; Significance: 7e-62; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 167 - 423
Target Start/End: Complemental strand, 34476065 - 34475808
Alignment:
Q  167 cacatttctatgaagatttaaaacctaannnnnnnagtacatatgatgaagctaatcaa-ttacgcagagaaccaatattgatgcaaagttgtctacaaa 265  Q
    ||||||||||||||||||| ||||||||       | ||||| |||||||||||||||| ||| |||||||||||||| |||||||||||||| || |||    
T  34476065 cacatttctatgaagatttcaaacctaaattttttaatacatgtgatgaagctaatcaaattatgcagagaaccaatactgatgcaaagttgtgtaaaaa 34475966  T
Q  266 taatgacttnnnnnnnntcatttgagttaaaatttgtggacgcaaaacagacgctattagcatcagaaatggtttgacgttaaaatttttgaagctaaat 365  Q
    |||||| ||         ||||||||||| ||||||||||||| |||  |||| |||||||||||||||||| |||| |||||| |||||||| ||||||    
T  34475965 taatgatttaaaaaaaggcatttgagttagaatttgtggacgctaaattgacgatattagcatcagaaatgggttgatgttaaattttttgaacctaaat 34475866  T
Q  366 aacaattttcttgcagtgagttatatagaaatctagatgcttaataatcatttcatcc 423  Q
    |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  34475865 aacagttttcttgcagtgagttatatagaaatctaaatgctttataatcatttcatcc 34475808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 34476136 - 34476081
Alignment:
Q  82 ttaaaagtaagggtccaattcactaaatttccatataaatgtggaattgtcataga 137  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34476136 ttaaaagtaagggtccaattcactaaatttccatataaatgtgaaattgtcataga 34476081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 42445401 - 42445362
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattat 46  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  42445401 aagataggggtccaaaagtgcaattaaaccttaaaattat 42445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 17799113 - 17799147
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaat 41  Q
    |||||||||||||||||||||||||||||||||||    
T  17799113 aagataggggtccaaaagtgcaattaaaccttaat 17799147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 8411197 - 8411141
Alignment:
Q  318 gctattagcatcagaaatggtttgacgttaaaatttttgaagctaaataacaatttt 374  Q
    ||||||| ||||| ||||||||||||| |||||| |||||||||||||  |||||||    
T  8411197 gctattaacatcataaatggtttgacgctaaaatgtttgaagctaaatttcaatttt 8411141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 35699136 - 35699168
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    |||||||||||||||||||||||||||||||||    
T  35699136 aagataggggtccaaaagtgcaattaaacctta 35699168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 315047 - 315017
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  315047 aagataggggtccaaaagtgcaattaaacct 315017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 1467092 - 1467126
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaat 41  Q
    ||||||||||||||||||||||||||| |||||||    
T  1467092 aagataggggtccaaaagtgcaattaagccttaat 1467126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 11362590 - 11362560
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  11362590 aagataggggtccaaaagtgcaattaaacct 11362560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 30218990 - 30219023
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  30218990 aagataggggtccaaaagtgcaattaagccttaa 30219023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 8739113 - 8739145
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    |||||||||||||||||||||||||||| ||||    
T  8739113 aagataggggtccaaaagtgcaattaaatctta 8739145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 23000793 - 23000825
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  23000793 aagataggggtccaaaagtgcaattaagcctta 23000825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 36589996 - 36590032
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatat 43  Q
    |||||| |||||||||||||||||||| |||||||||    
T  36589996 aagataagggtccaaaagtgcaattaagccttaatat 36590032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 40493929 - 40493961
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  40493929 aagataggggtccaaaagtgcaattaagcctta 40493961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 27822904 - 27822864
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattata 47  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  27822904 aagataggggtccaaaagtgcaattaagccttaatattata 27822864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 37953657 - 37953689
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    |||||||||||||||||||||||||||||||||    
T  37953657 aagataggggtccaaaagtgcaattaaacctta 37953689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 20283845 - 20283814
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  20283845 aagataggggtccaaaagtgcaattaaacctt 20283814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 21070473 - 21070442
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  21070473 aagataggggtccaaaagtgcaattaaacctt 21070442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 41574436 - 41574467
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  41574436 aagataggggtccaaaagtgcaattaaacctt 41574467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 1985853 - 1985883
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  1985853 aagataggggtccaaaagtgcaattaaacct 1985883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 4147068 - 4147098
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  4147068 aagataggggtccaaaagtgcaattaaacct 4147098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 37277744 - 37277774
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  37277744 aagataggggtccaaaagtgcaattaaacct 37277774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 41015075 - 41015105
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  41015075 aagataggggtccaaaagtgcaattaaacct 41015105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 44886188 - 44886218
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  44886188 aagataggggtccaaaagtgcaattaaacct 44886218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 8870288 - 8870255
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  8870288 aagataggggtccaaaagtgcaattaagccttaa 8870255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 30359126 - 30359163
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatatt 44  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  30359126 aagataggggtccaaaagtgcaattaagccttgatatt 30359163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 32318790 - 32318823
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  32318790 aagataggggtccaaaagtgcaattaagccttaa 32318823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 2321545 - 2321513
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  2321545 aagataggggtccaaaagtgcaattaagcctta 2321513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 15187957 - 15187921
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatat 43  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  15187957 aagataggggtccaaaagtgcaattaagcctaaatat 15187921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 37953403 - 37953367
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatat 43  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  37953403 aagataggggtccaaaagtgcaattaagcctaaatat 37953367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 19778303 - 19778264
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattat 46  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  19778303 aagataggggtccaaaagtgcaattaaacctaaatattat 19778264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 383
Target Start/End: Original strand, 773343 - 773412
Alignment:
Q  314 agacgctattagcatcagaaatggtttgacgttaaaatttttgaagctaaataacaattttcttgcagtg 383  Q
    |||| ||| |||||| ||||||| ||||| | |||||||| |||||||||||| ||||||||||| ||||    
T  773343 agacactagtagcataagaaatgatttgatgctaaaatttctgaagctaaatagcaattttcttgtagtg 773412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 228242 - 228273
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  228242 aagataggggtccaaaagtgcaattaaacctt 228273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 36376346 - 36376377
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  36376346 aagataggggtccaaaagtgcaattaaacctt 36376377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 46622583 - 46622544
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattat 46  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  46622583 aagataggggtccaaaagtgcaattaagccttattattat 46622544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 48871372 - 48871403
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  48871372 aagataggggtccaaaagtgcaattaaacctt 48871403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 11900334 - 11900368
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaat 41  Q
    ||||||||||||||||||||||||||| |||||||    
T  11900334 aagataggggtccaaaagtgcaattaagccttaat 11900368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 5181715 - 5181748
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    |||||||||||| |||||||||||||||||||||    
T  5181715 aagataggggtctaaaagtgcaattaaaccttaa 5181748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 18295881 - 18295852
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacc 36  Q
    ||||||||||||||||||||||||||||||    
T  18295881 aagataggggtccaaaagtgcaattaaacc 18295852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 19194189 - 19194156
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  19194189 aagataggggtccaaaagtgcaattaagccttaa 19194156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 23909924 - 23909887
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatatt 44  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  23909924 aagataggggtccaaaagtgcaattaagcctttatatt 23909887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 25683959 - 25683992
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  25683959 aagataggggtccaaaagtgcaattaagccttaa 25683992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 35711942 - 35711971
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacc 36  Q
    ||||||||||||||||||||||||||||||    
T  35711942 aagataggggtccaaaagtgcaattaaacc 35711971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 44189668 - 44189701
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    |||||||||||||| |||||||||||||||||||    
T  44189668 aagataggggtccagaagtgcaattaaaccttaa 44189701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 3931778 - 3931806
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaac 35  Q
    |||||||||||||||||||||||||||||    
T  3931778 aagataggggtccaaaagtgcaattaaac 3931806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 18363578 - 18363610
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  18363578 aagataggggtccaaaagtgcaattaagcctta 18363610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 18798059 - 18798027
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    |||||||||||||||||||||||||||| ||||    
T  18798059 aagataggggtccaaaagtgcaattaaatctta 18798027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 18852524 - 18852492
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  18852524 aagataggggtccaaaagtgcaattaagcctta 18852492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 21202886 - 21202922
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatat 43  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  21202886 aagatagggggccaaaagtgcaattaaacctttatat 21202922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 52233460 - 52233422
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatatta 45  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  52233460 aagataggggtccaaaagtgcaattaagccttaatatta 52233422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 40355877 - 40355845
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    |||||||||||||||||||||||||||||||||    
T  40355877 aagataggggtccaaaagtgcaattaaacctta 40355845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 45664424 - 45664464
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattata 47  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  45664424 aagataggggtccaaaagtgcaattaagcctaaatattata 45664464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 8535800 - 8535831
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  8535800 aagataggggtccaaaagtgcaattaaacctt 8535831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 8601039 - 8601070
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  8601039 aagataggggtccaaaagtgcaattaaacctt 8601070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 11204783 - 11204814
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  11204783 aagataggggtccaaaagtgcaattaaacctt 11204814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 36230581 - 36230550
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  36230581 aagataggggtccaaaagtgcaattaaacctt 36230550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 32558241 - 32558211
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  32558241 aagataggggtccaaaagtgcaattaaacct 32558211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 9517530 - 9517559
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacc 36  Q
    ||||||||||||||||||||||||||||||    
T  9517530 aagataggggtccaaaagtgcaattaaacc 9517559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 19830395 - 19830432
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatatt 44  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  19830395 aagataggagtccaaaagtgcaattaaaccttattatt 19830432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 20017661 - 20017694
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  20017661 aagataggggtccaaaagtgcaattaagccttaa 20017694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 26861303 - 26861270
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  26861303 aagataggggtccaaaagtgcaattaagccttaa 26861270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 29794722 - 29794689
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  29794722 aagataggggtccaaaagtgcaattaagccttaa 29794689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 52143194 - 52143165
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacc 36  Q
    ||||||||||||||||||||||||||||||    
T  52143194 aagataggggtccaaaagtgcaattaaacc 52143165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 14460586 - 14460618
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||| |||||||||||||    
T  14460586 aagataggggtccaaaagtacaattaaacctta 14460618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 27396810 - 27396842
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  27396810 aagataggggtccaaaagtgcaattaagcctta 27396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 36139395 - 36139363
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||| |||||||||||||||||||||    
T  36139395 aagataggggttcaaaagtgcaattaaacctta 36139363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 37029212 - 37029252
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattata 47  Q
    ||||||| ||||||||||||||||||| || ||||||||||    
T  37029212 aagatagaggtccaaaagtgcaattaagccataatattata 37029252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000006; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 384
Target Start/End: Original strand, 12209369 - 12209462
Alignment:
Q  291 gttaaaatttgtggacgcaaaacagacgctattagcatcagaaatggtttgacgttaaaatttttgaagctaaataacaattttcttgcagtga 384  Q
    |||| |||||||||| || ||  ||||||| |||||||||||||| || | ||| |||||||| |||||||| ||  ||||||||||| |||||    
T  12209369 gttagaatttgtggatgctaattagacgctgttagcatcagaaattgtctcacgctaaaatttctgaagctagattgcaattttcttgtagtga 12209462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 9703828 - 9703860
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    |||||||||||||||||||||||||||||||||    
T  9703828 aagataggggtccaaaagtgcaattaaacctta 9703860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 10255804 - 10255835
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  10255804 aagataggggtccaaaagtgcaattaaacctt 10255835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 15273263 - 15273293
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  15273263 aagataggggtccaaaagtgcaattaaacct 15273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 3535063 - 3535092
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacc 36  Q
    ||||||||||||||||||||||||||||||    
T  3535063 aagataggggtccaaaagtgcaattaaacc 3535092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 4037067 - 4037030
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatatt 44  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  4037067 aagatagggggccaaaagtgcaattaagccttaatatt 4037030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 11746027 - 11745995
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  11746027 aagataggggtccaaaagtgcaattaagcctta 11745995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 20080147 - 20080115
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  20080147 aagataggggtccaaaagtgcaattaagcctta 20080115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 27765287 - 27765255
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  27765287 aagataggggtccaaaagtgcaattaatcctta 27765255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 16859987 - 16859954
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||||||||||    
T  16859987 aagataggggtccaaaagtgcaattaaaccttaa 16859954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 26151823 - 26151791
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    |||||||||||||||||||||||||||||||||    
T  26151823 aagataggggtccaaaagtgcaattaaacctta 26151791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 28251662 - 28251694
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    |||||||||||||||||||||||||||||||||    
T  28251662 aagataggggtccaaaagtgcaattaaacctta 28251694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 28620068 - 28620029
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattat 46  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  28620068 aagataggggtccaaaagtgcaattaagccttaattttat 28620029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 40687695 - 40687656
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattat 46  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  40687695 aagataggggtccaaaagtgcaattaagccttaattttat 40687656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 1055400 - 1055370
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  1055400 aagataggggtccaaaagtgcaattaaacct 1055370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 5891764 - 5891794
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  5891764 aagataggggtccaaaagtgcaattaaacct 5891794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 19849581 - 19849551
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  19849581 aagataggggtccaaaagtgcaattaaacct 19849551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 25566826 - 25566856
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  25566826 aagataggggtccaaaagtgcaattaaacct 25566856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 29183162 - 29183132
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  29183162 aagataggggtccaaaagtgcaattaaacct 29183132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 2710369 - 2710336
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  2710369 aagataggggtccaaaagtgcaattaagccttaa 2710336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 4096481 - 4096452
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacc 36  Q
    ||||||||||||||||||||||||||||||    
T  4096481 aagataggggtccaaaagtgcaattaaacc 4096452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 5088356 - 5088389
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  5088356 aagataggggtccaaaagtgcaattaagccttaa 5088389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 13765545 - 13765578
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  13765545 aagataggggtccaaaagtgcaattaagccttaa 13765578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 14514968 - 14515001
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    |||||||||| |||||||||||||||||||||||    
T  14514968 aagatagggggccaaaagtgcaattaaaccttaa 14515001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 27264389 - 27264418
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacc 36  Q
    ||||||||||||||||||||||||||||||    
T  27264389 aagataggggtccaaaagtgcaattaaacc 27264418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 2710621 - 2710653
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  2710621 aagataggggtccaaaagtgcaattaagcctta 2710653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 40768172 - 40768204
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  40768172 aagataggggtccaaaagtgcaattaagcctta 40768204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 41140398 - 41140430
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  41140398 aagataggggtccaaaagtgcaattaagcctta 41140430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 30998468 - 30998501
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||||||||||    
T  30998468 aagataggggtccaaaagtgcaattaaaccttaa 30998501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 12640849 - 12640810
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattat 46  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  12640849 aagataggggtccaaaagtgcaattaagcctttatattat 12640810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 17554074 - 17554043
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  17554074 aagataggggtccaaaagtgcaattaaacctt 17554043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 31843816 - 31843777
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattat 46  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  31843816 aagataggggtccaaaagtgtaattaaaccttattattat 31843777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 19869442 - 19869472
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  19869442 aagataggggtccaaaagtgcaattaaacct 19869472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 23770051 - 23770081
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  23770051 aagataggggtccaaaagtgcaattaaacct 23770081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 24543027 - 24543061
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaat 41  Q
    |||||||||||||||||||||||||||||| ||||    
T  24543027 aagataggggtccaaaagtgcaattaaaccataat 24543061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 29432076 - 29432046
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  29432076 aagataggggtccaaaagtgcaattaaacct 29432046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 33338314 - 33338348
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaat 41  Q
    ||||||||||||||||||||||||||| |||||||    
T  33338314 aagataggggtccaaaagtgcaattaagccttaat 33338348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 34957641 - 34957671
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  34957641 aagataggggtccaaaagtgcaattaaacct 34957671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 37973542 - 37973512
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  37973542 aagataggggtccaaaagtgcaattaaacct 37973512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 7396170 - 7396137
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  7396170 aagataggggtccaaaagtgcaattaagccttaa 7396137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 384
Target Start/End: Original strand, 20293551 - 20293636
Alignment:
Q  299 ttgtggacgcaaaacagacgctattagcatcagaaatggtttgacgttaaaatttttgaagctaaataacaattttcttgcagtga 384  Q
    ||||||| || |||| |||||||||||||| ||||||||| | | | |||||  ||||||||||||| ||| ||| |||| |||||    
T  20293551 ttgtggatgctaaactgacgctattagcattagaaatggtcttatgctaaaaaatttgaagctaaatgacagtttacttgtagtga 20293636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 20472578 - 20472549
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacc 36  Q
    ||||||||||||||||||||||||||||||    
T  20472578 aagataggggtccaaaagtgcaattaaacc 20472549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 44921894 - 44921927
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  44921894 aagataggggtccaaaagtgcaattaagccttaa 44921927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 6386760 - 6386720
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattata 47  Q
    ||||||||||||||||||||||||||| |||| | ||||||    
T  6386760 aagataggggtccaaaagtgcaattaagcctttaaattata 6386720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 18994696 - 18994668
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaac 35  Q
    |||||||||||||||||||||||||||||    
T  18994696 aagataggggtccaaaagtgcaattaaac 18994668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 34158757 - 34158797
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattata 47  Q
    ||||||||| ||||||||||||||||||||| ||| |||||    
T  34158757 aagatagggatccaaaagtgcaattaaacctaaattttata 34158797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 34362849 - 34362817
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  34362849 aagataggggtccaaaagtgcaattaagcctta 34362817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 39136581 - 39136613
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  39136581 aagataggggtccaaaagtgcaattaagcctta 39136613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 45289784 - 45289816
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  45289784 aagataggggtccaaaagtgcaattaagcctta 45289816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 8728196 - 8728227
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  8728196 aagataggggtccaaaagtgcaattaaacctt 8728227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 9080083 - 9080114
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctt 38  Q
    ||||||||||||||||||||||||||||||||    
T  9080083 aagataggggtccaaaagtgcaattaaacctt 9080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 33621895 - 33621860
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaata 42  Q
    ||||||||||||||||||||||||||| ||||||||    
T  33621895 aagataggggtccaaaagtgcaattaagccttaata 33621860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 19914756 - 19914794
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatatta 45  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  19914756 aagataggggtccaaaagtgcaattaagcctaaatatta 19914794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 33252769 - 33252799
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  33252769 aagataggggtccaaaagtgcaattaaacct 33252799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 53422118 - 53422088
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  53422118 aagataggggtccaaaagtgcaattaaacct 53422088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 53531835 - 53531801
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaat 41  Q
    ||||||||||||||||||||||||||| |||||||    
T  53531835 aagataggggtccaaaagtgcaattaagccttaat 53531801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 33576436 - 33576403
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    |||||| |||||||||||||||||||||||||||    
T  33576436 aagataagggtccaaaagtgcaattaaaccttaa 33576403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 39708039 - 39708006
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    |||||||||||| |||||||||||||||||||||    
T  39708039 aagataggggtcgaaaagtgcaattaaaccttaa 39708006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 50033525 - 50033558
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  50033525 aagataggggtccaaaagtgcaattaagccttaa 50033558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 52916888 - 52916855
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  52916888 aagataggggtccaaaagtgcaattaagccttaa 52916855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 5153810 - 5153778
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||| |||||||||||||||||||||||||    
T  5153810 aagatagaggtccaaaagtgcaattaaacctta 5153778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 12881499 - 12881539
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattata 47  Q
    ||||||||||||||||||||||||||| ||| ||| |||||    
T  12881499 aagataggggtccaaaagtgcaattaagcctaaattttata 12881539  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 32205131 - 32205163
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  32205131 aagataggggtccaaaagtgcaattaagcctta 32205163  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 40082474 - 40082514
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaatattata 47  Q
    ||||||||||||||||||||||||||| ||||  |||||||    
T  40082474 aagataggggtccaaaagtgcaattaagcctttttattata 40082514  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 42465720 - 42465688
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  42465720 aagataggggtccaaaagtgcaattaagcctta 42465688  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 45743928 - 45743896
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacctta 39  Q
    ||||||||||||||||||||||||||| |||||    
T  45743928 aagataggggtccaaaagtgcaattaagcctta 45743896  T

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Target: scaffold0283 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 1213 - 1183
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacct 37  Q
    |||||||||||||||||||||||||||||||    
T  1213 aagataggggtccaaaagtgcaattaaacct 1183  T

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Target: scaffold0951 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 3734 - 3705
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacc 36  Q
    ||||||||||||||||||||||||||||||    
T  3734 aagataggggtccaaaagtgcaattaaacc 3705  T

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Target: scaffold0594 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 5621 - 5588
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  5621 aagataggggtccaaaagtgcaattaagccttaa 5588  T

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Target: scaffold0182 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 20624 - 20591
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  20624 aagataggggtccaaaagtgcaattaagccttaa 20591  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 29679 - 29646
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  29679 aagataggggtccaaaagtgcaattaagccttaa 29646  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 139458 - 139487
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaacc 36  Q
    ||||||||||||||||||||||||||||||    
T  139458 aagataggggtccaaaagtgcaattaaacc 139487  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 79019 - 78986
Alignment:
Q  7 aagataggggtccaaaagtgcaattaaaccttaa 40  Q
    ||||||||||||||||||||||||||| ||||||    
T  79019 aagataggggtccaaaagtgcaattaagccttaa 78986  T

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