View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4886_high_22 (Length: 237)
Name: NF4886_high_22
Description: NF4886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4886_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 222
Target Start/End: Original strand, 32950642 - 32950841
Alignment:
| Q |
20 |
gatttattgcactttttctaacttcgatattagcaaaaccatcacatgtatctggacaaatttgctccaaatacaatttttatgtaatatttacggctag |
119 |
Q |
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| T |
32950642 |
gatttattgcactttttctaacttcgatattagcaaaatcatcacatgtatttggacaaatttgctataaatacactttttatgtcatatttacggctgg |
32950741 |
T |
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| Q |
120 |
aagaaatacgataaggctttgtttctgagttttgaggagaaggagggaggagttaaaatnnnnnnnnnnngcaagtgaaagaaatagatgacaatgagag |
219 |
Q |
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| T |
32950742 |
aagaaatacgataaggctttgtttctgagttttgaggggaaggagggaggagtttaaaaaaaaaaaaa---caagtgaaagaaatagatgacaatgagag |
32950838 |
T |
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