View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4886_low_17 (Length: 260)
Name: NF4886_low_17
Description: NF4886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4886_low_17 |
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Alignment Details
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 30726292 - 30726510
Alignment:
| Q |
1 |
tttgttcaatatatcttgcttataaaagaaaagtttgaaactatggtagataagttttaaagacaatttagaaaattgataagttcgacctacaaaattt |
100 |
Q |
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| T |
30726292 |
tttgttcaatatatcttgcttataaaagaaaagtttgaaactatggtagataagttttaaagacaatttagaaaattgataagttcgacctacaaaattt |
30726391 |
T |
|
| Q |
101 |
tctcaatgnnnnnnnagaggagttttttcaatgttaaatgcaataaccaatttacaaaattgataaatggataataaaaaattgagttgaggagctaatt |
200 |
Q |
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|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
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| T |
30726392 |
tctcaatgtttttttagtggagttttttcaatgttaaatgcaataaccaatttacaaaattgataaatacaaaataaaaaattgagttgaggagctaatt |
30726491 |
T |
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| Q |
201 |
cggaaaacaataaaagcag |
219 |
Q |
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||||||||||||||||||| |
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| T |
30726492 |
cggaaaacaataaaagcag |
30726510 |
T |
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