View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4886_low_21 (Length: 238)
Name: NF4886_low_21
Description: NF4886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4886_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 24 - 222
Target Start/End: Original strand, 40433229 - 40433427
Alignment:
| Q |
24 |
atttcccttctaataaatgaataacagctcccaaaggaaatgagagaaggctgagtaaaaaatcagcaaattctttactcactagagcatacagaatttt |
123 |
Q |
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| T |
40433229 |
atttcccttctaataaatgaataacagctcccaaaggaaatgagagaaggctgagtaaaaaatcagcaaattctttactcactagagcatacagaatttt |
40433328 |
T |
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| Q |
124 |
gtttacagannnnnnnaagaccagtgtcacactaaatttgatgtcactattgtttttaacatcacaagggaagaactgtgacatttcgagggttggttt |
222 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
40433329 |
gtttacagatttttttaagaccagtgtcacactaaatttgatgtcactattgtttttaacatcacaagggaagaaccgtgacatttcgagggttggttt |
40433427 |
T |
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