View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4887-Insertion-12 (Length: 200)
Name: NF4887-Insertion-12
Description: NF4887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4887-Insertion-12 |
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Alignment Details
Target: chr3 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 45299734 - 45299923
Alignment:
| Q |
8 |
caaactatacctcatgtttattatttgttcactcagctaactcctattaattccatatatagtactcaacaaaatcgtatgtattctccatctaattaat |
107 |
Q |
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| T |
45299734 |
caaactatacctcatgtttattatttgttcactaagctaactcctattaattccatatatagtactcatcaaaatcgtatgtattctccatctaattaat |
45299833 |
T |
|
| Q |
108 |
gaatgtatatcactactaaccaattaatgaataataccatggtggagtagtatatgtatatgtgtatatcagtaatgatatagggtccat |
197 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
45299834 |
gaatgtatatcactaccaaccaattaatgaataataccatggtggagtagtatatgtatatgtgtatatcactaatgatatagggtccat |
45299923 |
T |
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