View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4887-Insertion-2 (Length: 1077)

Name: NF4887-Insertion-2
Description: NF4887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4887-Insertion-2
NF4887-Insertion-2
[»] chr5 (46 HSPs)
chr5 (615-957)||(620942-621288)
chr5 (616-957)||(35406516-35406861)
chr5 (616-955)||(23952098-23952441)
chr5 (425-607)||(29241264-29241449)
chr5 (505-608)||(7208254-7208360)
chr5 (505-608)||(40182430-40182536)
chr5 (458-608)||(11963260-11963413)
chr5 (458-608)||(32528634-32528787)
chr5 (458-608)||(35701196-35701349)
chr5 (428-608)||(31770615-31770799)
chr5 (458-608)||(7523090-7523244)
chr5 (424-595)||(24181663-24181835)
chr5 (505-608)||(4818164-4818270)
chr5 (458-608)||(2351599-2351752)
chr5 (424-597)||(41459474-41459648)
chr5 (459-608)||(41790486-41790638)
chr5 (505-608)||(21739185-21739291)
chr5 (510-608)||(39918478-39918579)
chr5 (519-608)||(3735338-3735429)
chr5 (505-608)||(6284322-6284429)
chr5 (527-598)||(27839109-27839180)
chr5 (505-597)||(23091341-23091434)
chr5 (505-597)||(40489303-40489396)
chr5 (510-597)||(28090557-28090645)
chr5 (505-608)||(22493443-22493548)
chr5 (458-608)||(34794806-34794959)
chr5 (505-608)||(553362-553469)
chr5 (505-608)||(5571668-5571772)
chr5 (505-608)||(700625-700731)
chr5 (509-608)||(31644416-31644518)
chr5 (425-608)||(31880100-31880286)
chr5 (519-597)||(22432346-22432424)
chr5 (505-608)||(39788158-39788265)
chr5 (505-608)||(8561006-8561111)
chr5 (616-797)||(2372454-2372635)
chr5 (519-608)||(24036211-24036302)
chr5 (505-608)||(8136805-8136909)
chr5 (505-612)||(18470448-18470558)
chr5 (519-597)||(7725846-7725924)
chr5 (519-608)||(7770303-7770394)
chr5 (523-608)||(32093005-32093092)
chr5 (505-571)||(5673110-5673177)
chr5 (519-579)||(1338601-1338661)
chr5 (519-608)||(4689722-4689813)
chr5 (554-597)||(5598496-5598539)
chr5 (556-597)||(11090905-11090946)
[»] scaffold0088 (1 HSPs)
scaffold0088 (9-368)||(47070-47421)
[»] chr2 (47 HSPs)
chr2 (616-957)||(34585926-34586293)
chr2 (423-608)||(33889127-33889315)
chr2 (505-608)||(5278852-5278958)
chr2 (509-608)||(7761591-7761693)
chr2 (505-608)||(16104240-16104346)
chr2 (458-608)||(17540633-17540787)
chr2 (505-608)||(32497881-32497987)
chr2 (505-607)||(30326350-30326455)
chr2 (458-608)||(34338729-34338882)
chr2 (425-597)||(44284508-44284688)
chr2 (458-597)||(39461233-39461373)
chr2 (458-608)||(7258815-7258969)
chr2 (458-607)||(2085991-2086143)
chr2 (458-608)||(37308575-37308727)
chr2 (505-608)||(42706324-42706431)
chr2 (505-608)||(2645104-2645210)
chr2 (505-608)||(9717190-9717296)
chr2 (505-608)||(9732948-9733054)
chr2 (505-608)||(19513707-19513813)
chr2 (505-608)||(35114751-35114857)
chr2 (520-611)||(16177898-16177991)
chr2 (509-608)||(4641486-4641588)
chr2 (509-608)||(12672492-12672594)
chr2 (518-608)||(40832487-40832579)
chr2 (519-608)||(30798507-30798598)
chr2 (505-608)||(18685802-18685908)
chr2 (505-608)||(33366576-33366682)
chr2 (505-608)||(37003886-37003992)
chr2 (505-597)||(10399901-10399994)
chr2 (505-592)||(18793297-18793385)
chr2 (505-608)||(3913478-3913584)
chr2 (505-608)||(26418889-26418995)
chr2 (519-608)||(12939318-12939409)
chr2 (458-597)||(42365496-42365636)
chr2 (616-671)||(34580177-34580232)
chr2 (505-580)||(32766553-32766629)
chr2 (505-608)||(11114838-11114944)
chr2 (519-597)||(13829419-13829497)
chr2 (517-608)||(28824575-28824668)
chr2 (505-608)||(40692271-40692369)
chr2 (505-597)||(6896134-6896227)
chr2 (527-597)||(41934570-41934640)
chr2 (520-597)||(18127019-18127096)
chr2 (527-596)||(26796218-26796286)
chr2 (548-597)||(38993102-38993151)
chr2 (554-608)||(41366128-41366184)
chr2 (519-608)||(20907570-20907661)
[»] chr3 (53 HSPs)
chr3 (615-914)||(11198050-11198350)
chr3 (458-608)||(1344719-1344872)
chr3 (466-597)||(53557820-53557952)
chr3 (428-597)||(44116829-44116999)
chr3 (425-608)||(20609660-20609846)
chr3 (425-608)||(34026554-34026740)
chr3 (458-608)||(12349183-12349336)
chr3 (458-608)||(28675710-28675863)
chr3 (505-608)||(21221372-21221478)
chr3 (429-608)||(42636415-42636597)
chr3 (505-597)||(4851481-4851574)
chr3 (508-608)||(29584845-29584948)
chr3 (458-608)||(40094423-40094576)
chr3 (509-597)||(47958457-47958546)
chr3 (458-597)||(26282412-26282552)
chr3 (505-608)||(24571248-24571354)
chr3 (505-608)||(25860433-25860539)
chr3 (458-608)||(2134990-2135143)
chr3 (508-608)||(39052850-39052953)
chr3 (458-597)||(51259805-51259945)
chr3 (505-612)||(25927335-25927445)
chr3 (505-607)||(3864688-3864792)
chr3 (519-597)||(33364803-33364881)
chr3 (505-597)||(38213321-38213414)
chr3 (508-597)||(45690926-45691015)
chr3 (519-608)||(29646048-29646139)
chr3 (505-608)||(3695304-3695410)
chr3 (505-608)||(21373898-21374003)
chr3 (519-597)||(31883047-31883125)
chr3 (505-597)||(5442258-5442351)
chr3 (505-597)||(54622821-54622914)
chr3 (505-579)||(20255012-20255087)
chr3 (505-571)||(53046692-53046759)
chr3 (510-608)||(3964261-3964361)
chr3 (505-608)||(51296548-51296654)
chr3 (519-597)||(41694926-41695004)
chr3 (519-592)||(32621851-32621924)
chr3 (519-608)||(49748923-49749014)
chr3 (519-608)||(50678780-50678871)
chr3 (505-608)||(3867661-3867767)
chr3 (505-608)||(51925220-51925326)
chr3 (519-597)||(50386481-50386559)
chr3 (543-608)||(19906768-19906835)
chr3 (519-580)||(10747199-10747261)
chr3 (554-597)||(14155485-14155528)
chr3 (519-607)||(44267724-44267814)
chr3 (519-576)||(25395596-25395653)
chr3 (505-597)||(44000228-44000321)
chr3 (544-592)||(39215499-39215547)
chr3 (554-597)||(8648582-8648625)
chr3 (505-551)||(43175536-43175583)
chr3 (525-590)||(19190651-19190716)
chr3 (548-597)||(22484768-22484817)
[»] chr8 (53 HSPs)
chr8 (425-608)||(4052368-4052552)
chr8 (458-608)||(31513616-31513769)
chr8 (458-608)||(31731983-31732136)
chr8 (458-608)||(45446374-45446527)
chr8 (505-608)||(6386542-6386648)
chr8 (458-608)||(29563259-29563412)
chr8 (458-608)||(32020034-32020187)
chr8 (427-608)||(30543055-30543239)
chr8 (428-608)||(37664316-37664499)
chr8 (505-608)||(8673088-8673194)
chr8 (505-608)||(29672356-29672462)
chr8 (505-608)||(32303618-32303724)
chr8 (505-607)||(34063094-34063199)
chr8 (458-608)||(34101427-34101580)
chr8 (458-608)||(41709696-41709849)
chr8 (505-597)||(7394860-7394953)
chr8 (424-608)||(14005077-14005264)
chr8 (458-597)||(27103878-27104018)
chr8 (459-592)||(13406986-13407120)
chr8 (505-597)||(25478209-25478302)
chr8 (505-608)||(3251689-3251795)
chr8 (505-608)||(5968897-5969003)
chr8 (505-608)||(12753358-12753464)
chr8 (509-608)||(45114025-45114127)
chr8 (519-597)||(10467045-10467123)
chr8 (519-597)||(17805671-17805750)
chr8 (505-608)||(37618425-37618531)
chr8 (519-597)||(7591493-7591571)
chr8 (519-597)||(41548599-41548677)
chr8 (530-608)||(21272676-21272756)
chr8 (519-592)||(22999238-22999311)
chr8 (514-595)||(11926878-11926959)
chr8 (514-597)||(11944851-11944934)
chr8 (505-608)||(15001433-15001538)
chr8 (520-592)||(6460243-6460315)
chr8 (519-612)||(27109570-27109665)
chr8 (519-608)||(39642864-39642955)
chr8 (510-597)||(15351707-15351794)
chr8 (523-607)||(35225647-35225733)
chr8 (505-608)||(40389006-40389112)
chr8 (519-597)||(10656732-10656810)
chr8 (505-607)||(29611089-29611194)
chr8 (510-597)||(16595195-16595283)
chr8 (519-608)||(30501126-30501217)
chr8 (505-608)||(10320310-10320416)
chr8 (527-597)||(5859518-5859588)
chr8 (543-593)||(36426297-36426347)
chr8 (520-597)||(3361789-3361866)
chr8 (423-523)||(37861765-37861865)
chr8 (545-580)||(37861866-37861901)
chr8 (519-561)||(17520584-17520626)
chr8 (427-472)||(955123-955168)
chr8 (519-580)||(37474700-37474761)
[»] chr4 (73 HSPs)
chr4 (423-608)||(33552853-33553041)
chr4 (466-608)||(23521810-23521955)
chr4 (458-608)||(43641021-43641174)
chr4 (425-597)||(29616059-29616232)
chr4 (458-597)||(37865675-37865815)
chr4 (505-608)||(55065344-55065450)
chr4 (458-608)||(9512351-9512504)
chr4 (458-608)||(20802542-20802695)
chr4 (458-608)||(29785548-29785701)
chr4 (458-608)||(56154543-56154696)
chr4 (425-608)||(2725144-2725329)
chr4 (458-608)||(21579948-21580101)
chr4 (505-597)||(36743712-36743805)
chr4 (506-608)||(24002308-24002414)
chr4 (505-612)||(46680517-46680627)
chr4 (505-608)||(55593854-55593960)
chr4 (458-595)||(20518048-20518186)
chr4 (505-597)||(12600855-12600948)
chr4 (463-608)||(34929842-34929990)
chr4 (505-597)||(50727937-50728030)
chr4 (505-597)||(50735951-50736044)
chr4 (509-597)||(52949694-52949782)
chr4 (505-608)||(9807125-9807231)
chr4 (505-608)||(33177043-33177149)
chr4 (505-608)||(38486268-38486374)
chr4 (428-578)||(47361452-47361603)
chr4 (458-608)||(49152111-49152263)
chr4 (458-608)||(52319248-52319398)
chr4 (505-597)||(4325760-4325853)
chr4 (468-608)||(24210250-24210394)
chr4 (520-597)||(44649188-44649265)
chr4 (464-608)||(20694299-20694446)
chr4 (424-608)||(36497105-36497292)
chr4 (519-608)||(38812504-38812595)
chr4 (505-608)||(21202709-21202814)
chr4 (509-591)||(54542963-54543046)
chr4 (519-597)||(47642515-47642593)
chr4 (520-597)||(1231296-1231373)
chr4 (505-597)||(7554981-7555074)
chr4 (505-608)||(36885900-36886007)
chr4 (505-592)||(14296566-14296654)
chr4 (505-592)||(14314814-14314902)
chr4 (616-772)||(21987806-21987962)
chr4 (519-608)||(41711831-41711922)
chr4 (509-608)||(32181236-32181338)
chr4 (505-608)||(44324353-44324459)
chr4 (458-608)||(6776500-6776653)
chr4 (519-592)||(50178522-50178595)
chr4 (505-612)||(11056011-11056121)
chr4 (505-595)||(42772727-42772818)
chr4 (527-597)||(40792409-40792479)
chr4 (505-589)||(42869942-42870028)
chr4 (505-597)||(37695565-37695658)
chr4 (543-608)||(50729553-50729620)
chr4 (505-608)||(16320490-16320594)
chr4 (510-608)||(22318395-22318496)
chr4 (505-592)||(23327886-23327975)
chr4 (519-580)||(56487293-56487354)
chr4 (554-597)||(2629975-2630018)
chr4 (505-608)||(3649605-3649711)
chr4 (508-589)||(20644273-20644355)
chr4 (519-592)||(53200673-53200746)
chr4 (543-608)||(28115260-28115327)
chr4 (505-608)||(37931889-37931995)
chr4 (511-591)||(985257-985338)
chr4 (505-597)||(13110297-13110389)
chr4 (506-597)||(29592865-29592957)
chr4 (519-608)||(50186512-50186603)
chr4 (505-608)||(7001823-7001927)
chr4 (505-608)||(39078630-39078736)
chr4 (519-597)||(43893561-43893639)
chr4 (530-592)||(44355884-44355946)
chr4 (555-597)||(45577716-45577758)
[»] chr7 (59 HSPs)
chr7 (423-597)||(40753043-40753218)
chr7 (458-608)||(32873788-32873941)
chr7 (458-608)||(47953113-47953266)
chr7 (458-597)||(47947683-47947823)
chr7 (458-608)||(11321904-11322057)
chr7 (458-608)||(36769588-36769741)
chr7 (458-608)||(46633620-46633773)
chr7 (505-608)||(21784841-21784947)
chr7 (458-608)||(26994244-26994397)
chr7 (505-597)||(10932589-10932682)
chr7 (459-608)||(18386449-18386601)
chr7 (505-612)||(43158701-43158811)
chr7 (458-595)||(18470607-18470745)
chr7 (505-608)||(3922722-3922828)
chr7 (505-608)||(44748665-44748771)
chr7 (505-608)||(47316717-47316823)
chr7 (505-597)||(26371841-26371934)
chr7 (461-608)||(29661249-29661399)
chr7 (505-608)||(30849265-30849371)
chr7 (458-597)||(3892058-3892198)
chr7 (505-608)||(41211219-41211326)
chr7 (459-608)||(1870058-1870211)
chr7 (519-597)||(26652851-26652929)
chr7 (505-575)||(16963077-16963149)
chr7 (458-597)||(30599040-30599180)
chr7 (505-608)||(34117422-34117528)
chr7 (458-608)||(43189261-43189415)
chr7 (519-597)||(34295436-34295514)
chr7 (519-597)||(43368186-43368264)
chr7 (505-608)||(329440-329546)
chr7 (509-597)||(21133345-21133435)
chr7 (505-608)||(46408859-46408965)
chr7 (519-608)||(43213944-43214035)
chr7 (505-608)||(9913495-9913601)
chr7 (505-608)||(9927183-9927289)
chr7 (505-575)||(11250592-11250663)
chr7 (505-607)||(41665595-41665700)
chr7 (519-608)||(22631723-22631814)
chr7 (519-597)||(20127274-20127352)
chr7 (519-597)||(38301328-38301405)
chr7 (505-597)||(1363607-1363699)
chr7 (505-597)||(48445491-48445584)
chr7 (543-595)||(7958635-7958687)
chr7 (519-597)||(17237061-17237139)
chr7 (519-597)||(37966959-37967037)
chr7 (423-484)||(16962985-16963046)
chr7 (511-595)||(29992729-29992813)
chr7 (553-607)||(34519527-34519583)
chr7 (505-597)||(46627140-46627233)
chr7 (553-597)||(8054408-8054452)
chr7 (519-608)||(23349310-23349401)
chr7 (510-596)||(22724564-22724651)
chr7 (425-472)||(46408771-46408818)
chr7 (530-597)||(48699394-48699461)
chr7 (519-597)||(15035285-15035363)
chr7 (505-607)||(22724052-22724157)
chr7 (519-597)||(48894702-48894780)
chr7 (553-607)||(26910430-26910486)
chr7 (519-580)||(41903603-41903664)
[»] chr1 (58 HSPs)
chr1 (425-597)||(26118321-26118494)
chr1 (423-595)||(30105788-30105961)
chr1 (458-597)||(28340409-28340549)
chr1 (458-608)||(844817-844970)
chr1 (458-608)||(16451055-16451208)
chr1 (458-608)||(45490968-45491121)
chr1 (458-608)||(1351528-1351680)
chr1 (505-608)||(16386829-16386935)
chr1 (505-608)||(16437337-16437443)
chr1 (458-608)||(42510453-42510606)
chr1 (459-608)||(6711139-6711291)
chr1 (458-597)||(12890166-12890306)
chr1 (505-608)||(32270328-32270434)
chr1 (458-608)||(35387404-35387557)
chr1 (458-608)||(41972840-41972992)
chr1 (458-608)||(51264423-51264576)
chr1 (505-612)||(7183893-7184003)
chr1 (442-580)||(20495014-20495153)
chr1 (505-597)||(50540319-50540412)
chr1 (519-612)||(16704716-16704811)
chr1 (458-607)||(17887875-17888028)
chr1 (505-597)||(16476261-16476354)
chr1 (505-597)||(17327755-17327848)
chr1 (519-612)||(41967938-41968033)
chr1 (505-608)||(1601148-1601254)
chr1 (505-608)||(31004107-31004213)
chr1 (510-608)||(13994168-13994268)
chr1 (519-597)||(38663122-38663200)
chr1 (519-597)||(46154890-46154968)
chr1 (519-597)||(50304641-50304719)
chr1 (509-608)||(39281873-39281975)
chr1 (505-608)||(44738135-44738240)
chr1 (519-597)||(42512876-42512954)
chr1 (509-608)||(32289437-32289539)
chr1 (520-608)||(50382496-50382586)
chr1 (458-597)||(24339745-24339883)
chr1 (528-597)||(26764901-26764970)
chr1 (423-608)||(34663820-34664008)
chr1 (519-608)||(25539845-25539936)
chr1 (505-608)||(42705331-42705437)
chr1 (505-580)||(3414976-3415053)
chr1 (505-597)||(51703269-51703361)
chr1 (519-608)||(11772725-11772816)
chr1 (519-608)||(15539983-15540074)
chr1 (553-597)||(26733579-26733623)
chr1 (519-608)||(45658811-45658902)
chr1 (509-580)||(49303477-49303548)
chr1 (505-608)||(6029394-6029500)
chr1 (519-597)||(25343315-25343393)
chr1 (530-597)||(46447665-46447732)
chr1 (519-597)||(15324147-15324225)
chr1 (505-597)||(38087102-38087195)
chr1 (510-597)||(2761662-2761749)
chr1 (519-608)||(5109719-5109809)
chr1 (545-597)||(7837149-7837201)
chr1 (527-597)||(570384-570454)
chr1 (534-576)||(49799382-49799424)
chr1 (505-597)||(6144092-6144185)
[»] chr6 (37 HSPs)
chr6 (458-608)||(2614815-2614968)
chr6 (519-608)||(11382045-11382136)
chr6 (505-608)||(3259649-3259755)
chr6 (505-608)||(11613848-11613954)
chr6 (459-597)||(17867755-17867894)
chr6 (459-597)||(17877538-17877677)
chr6 (509-608)||(24242634-24242736)
chr6 (505-597)||(34176796-34176889)
chr6 (458-597)||(32132450-32132590)
chr6 (505-608)||(3932864-3932970)
chr6 (505-608)||(11279094-11279200)
chr6 (458-608)||(32409909-32410062)
chr6 (424-608)||(166980-167167)
chr6 (508-608)||(15277337-15277440)
chr6 (505-608)||(10324168-10324274)
chr6 (509-608)||(17443232-17443334)
chr6 (458-608)||(11212176-11212329)
chr6 (458-608)||(15276994-15277147)
chr6 (509-608)||(18057489-18057591)
chr6 (505-608)||(24203329-24203434)
chr6 (519-597)||(10485138-10485216)
chr6 (520-597)||(10959982-10960059)
chr6 (519-608)||(34684040-34684132)
chr6 (519-597)||(3379691-3379769)
chr6 (509-612)||(3290642-3290746)
chr6 (519-612)||(8177934-8178029)
chr6 (517-597)||(9902728-9902808)
chr6 (509-608)||(14925513-14925615)
chr6 (505-608)||(31870157-31870263)
chr6 (520-597)||(7396195-7396272)
chr6 (543-608)||(4494172-4494239)
chr6 (519-608)||(18597215-18597306)
chr6 (458-560)||(29814784-29814887)
chr6 (505-607)||(29054323-29054427)
chr6 (505-597)||(23636189-23636282)
chr6 (506-560)||(28502427-28502482)
chr6 (505-597)||(27824720-27824813)
[»] scaffold0360 (2 HSPs)
scaffold0360 (425-608)||(15405-15587)
scaffold0360 (527-597)||(13616-13686)
[»] scaffold0181 (1 HSPs)
scaffold0181 (428-597)||(19127-19297)
[»] scaffold0027 (1 HSPs)
scaffold0027 (459-608)||(15092-15244)
[»] scaffold0169 (2 HSPs)
scaffold0169 (508-608)||(12560-12663)
scaffold0169 (508-608)||(18078-18181)
[»] scaffold0014 (1 HSPs)
scaffold0014 (505-608)||(101915-102021)
[»] scaffold0004 (1 HSPs)
scaffold0004 (505-597)||(373001-373094)
[»] scaffold0208 (1 HSPs)
scaffold0208 (458-608)||(2362-2515)
[»] scaffold0098 (1 HSPs)
scaffold0098 (509-597)||(51409-51498)
[»] scaffold0054 (2 HSPs)
scaffold0054 (505-608)||(23543-23647)
scaffold0054 (527-597)||(19896-19966)
[»] scaffold0957 (1 HSPs)
scaffold0957 (519-589)||(2540-2610)
[»] scaffold0729 (1 HSPs)
scaffold0729 (458-608)||(4603-4756)
[»] scaffold0650 (1 HSPs)
scaffold0650 (519-608)||(1667-1758)
[»] scaffold0155 (1 HSPs)
scaffold0155 (510-597)||(33581-33669)
[»] scaffold0280 (1 HSPs)
scaffold0280 (505-608)||(13711-13817)
[»] scaffold0077 (1 HSPs)
scaffold0077 (547-592)||(7503-7548)
[»] scaffold0025 (1 HSPs)
scaffold0025 (519-608)||(5464-5555)


Alignment Details
Target: chr5 (Bit Score: 270; Significance: 1e-150; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 615 - 957
Target Start/End: Complemental strand, 621288 - 620942
Alignment:
Q  615 acactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatggaga 714  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||    
T  621288 acactactagaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagacggaagttgagaccgaatataatgaacagaga 621189  T
Q  715 cggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaa---nnn 811  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  621188 cggaattatatttttaacatcagagacagactttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaaatttct 621089  T
Q  812 nnnnnnaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaaccc-aaac 910  Q
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  621088 ttttttaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaaaac 620989  T
Q  911 ccccaattttttcatccctcaacttcaaatttctgcaaagccttaaa 957  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  620988 ccccaattttttcatccctcaacttcaaatttctgcaaagccttaaa 620942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 616 - 957
Target Start/End: Original strand, 35406516 - 35406861
Alignment:
Q  616 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatggagac 715  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||    
T  35406516 cactactagaaaagtttcatataccaacggaatttagagacagattttattccgtctctgatagagacggaagttgagaccgaatataatgaacagagac 35406615  T
Q  716 ggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaa---nnnn 812  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||           
T  35406616 ggaattatatttttaacatcagagacggactttagagacggattgtaccgtcacaaaattattttgtctccaattccgtctcaaacaggtcaaatttctt 35406715  T
Q  813 nnnnnaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaa-acc 911  Q
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  35406716 tttttaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaagacc 35406815  T
Q  912 cccaattttttcatccctcaacttcaaatttctgcaaagccttaaa 957  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  35406816 cccaattttttcatccctcaacttcaaatttctgcaaagccttaaa 35406861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 616 - 955
Target Start/End: Complemental strand, 23952441 - 23952098
Alignment:
Q  616 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatggagac 715  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||    
T  23952441 cactactagaaaagttttatataccgacggaatttagagacagattttattccgtctctgatagagacggaagttgagaccgaatataaggaagagagac 23952342  T
Q  716 ggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaa---nnnn 812  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  23952341 ggaattttatttttaacatcagagacggactttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaaatttctt 23952242  T
Q  813 nnnnnaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaaccc-aaacc 911  Q
         ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||||    
T  23952241 tttttaattaattaaaaataactttttatccattcgttggagccatatctcattttcaaaggctccaaagtcgaattttacttggctccaacccaaaacc 23952142  T
Q  912 cccaattttttcatccctcaacttcaaatttctgcaaagcctta 955  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  23952141 cccaattttttcatcccttaacttcaaatttctgcaaagcctta 23952098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 425 - 607
Target Start/End: Original strand, 29241264 - 29241449
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-t 523  Q
    ||||||| |||||||  ||||||||||||| | || |||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| |    
T  29241264 gggtgtgcttggtttgcaaaacagcaagtactggacagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaatttttt 29241363  T
Q  524 gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttgg 607  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||| |||||||||| || |||||||||||||  ||||||||||    
T  29241364 gttttatacgatttttgagggacaaaatgctattttgatattttagccaacttgtacgtgggacaaaaagttgtgctgtggtttgg 29241449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 7208360 - 7208254
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||    
T  7208360 atggcattgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtg 7208261  T
Q  602 gtttggt 608  Q
    |||||||    
T  7208260 gtttggt 7208254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 40182430 - 40182536
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||    
T  40182430 atggcattgagtaattttttgttttatacgatttttgagagacaaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgatgtg 40182529  T
Q  602 gtttggt 608  Q
    |||||||    
T  40182530 gtttggt 40182536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 11963260 - 11963413
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| |||||||||||| |||||||| ||||||| |        |||||||||||||||||| | ||||||||||||||||| ||||||||| ||||    
T  11963260 gatagaacagtacaacacaaagcagaataacacatgacaaattttttatggcattgagtaattttgtattttatacgatttttgagggacaaaatgctat 11963359  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||| || || |||||||||||||  |||||||||||    
T  11963360 tttggtattttagacaacttgcacgtgggacaaaaagttgtgctgtggtttggt 11963413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 32528634 - 32528787
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||| ||||||||| | ||||||| |        |||||||||| ||||||| ||||||||||||||||||| ||||||||| ||||    
T  32528634 gatagaacagtacaacataaggcagaacagcacatgacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctat 32528733  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  32528734 tttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 32528787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 35701196 - 35701349
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||||| |||| || |        |||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  35701196 gatagaacagtacaacacaaggcagaataacacaggacaaattttttatggcaatgagtaattttttgttttatacgatttttgagggacaaaatgctat 35701295  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||||||||| ||  |||||||||  ||||||||||||||    
T  35701296 tttggtattttagacaacttgtacgtggaacaaaaagttatgttgtggtttggt 35701349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 428 - 608
Target Start/End: Complemental strand, 31770799 - 31770615
Alignment:
Q  428 tgtgtttggtttataaaacagca-agtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gt 525  Q
    ||||||||||||  ||||||| | |||||  ||||||| ||||||||||||||||||| | |||| || |        ||||||||||||||||||| ||    
T  31770799 tgtgtttggtttgcaaaacagaacagtataagatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgt 31770700  T
Q  526 tttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||| || ||||||||||  ||||||||||||||    
T  31770699 tttatatgatttttgagggacaaaatgctattttggtatttcagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 31770615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 7523090 - 7523244
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt--tgttttatacgatttttgaaggacaaaattcta 555  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||| ||||||||||||||  ||||||||||||||||||| ||||||||| |||    
T  7523090 gatagaacagtacaacacaaggcagaacagcacaggacaaattttttatgacattgagtaatttttttgttttatacgatttttgagggacaaaatgcta 7523189  T
Q  556 ttttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  7523190 ttttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 7523244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 424 - 595
Target Start/End: Complemental strand, 24181835 - 24181663
Alignment:
Q  424 agggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattt-t 522  Q
    ||||||||||||||||  ||||||| ||||| | || |||| ||||||||||||||||||| | |||| || |        ||||||||||||||||| |    
T  24181835 agggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaatttgt 24181736  T
Q  523 tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 595  Q
    ||||||||||||| ||||  ||||||||| |||||||||||||||||||||||| ||| || |||||||||||    
T  24181735 tgttttatacgatctttgggggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagtt 24181663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 4818270 - 4818164
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  4818270 atggcattgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtg 4818171  T
Q  602 gtttggt 608  Q
    |||||||    
T  4818170 gtttggt 4818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 2351599 - 2351752
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||||||||||||||||||| ||||| |||||||||||| |||||||||  |||    
T  2351599 gatagaacagtacaacacaaggcagaacaacacaggataaattttttatggcattgagtaattttttgttttgtacgatttttgagggacaaaatgttat 2351698  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  2351699 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 2351752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 424 - 597
Target Start/End: Original strand, 41459474 - 41459648
Alignment:
Q  424 agggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt- 522  Q
    ||||| ||||||||||  |||||||||||||||  | |||| |||||||||||||| |||| | |||| || |        ||||||||||||||||||     
T  41459474 agggtttgtttggtttgcaaaacagcaagtattgaacagaacagtacaacacaaggtagaacagcacaggacaaaaatttaatggcattgagtaattttt 41459573  T
Q  523 tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||||| ||  ||||||||||||    
T  41459574 tgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtggaacaaaaagttgt 41459648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 459 - 608
Target Start/End: Complemental strand, 41790638 - 41790486
Alignment:
Q  459 atagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctatt 557  Q
    |||||| ||||||||||||||||||| | ||||||| |        |||||||||||||||||| ||||||||||||||||||  |||||||||  ||||    
T  41790638 atagaacagtacaacacaaggcagaacaacacatgacaaatattttatggcattgagtaattttatgttttatacgatttttgggggacaaaatgttatt 41790539  T
Q  558 ttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    || ||||||||||||| |||||| |||||||||||||  ||||||||||||||    
T  41790538 ttagtattttagacaatttgtacgtgagacaaaaagttgtgttgtggtttggt 41790486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 21739291 - 21739185
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||| ||||||||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  21739291 atggcattgtgtaattttttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtg 21739192  T
Q  602 gtttggt 608  Q
    |||||||    
T  21739191 gtttggt 21739185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 510 - 608
Target Start/End: Original strand, 39918478 - 39918579
Alignment:
Q  510 attgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttg 606  Q
    ||||||||||||| ||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  39918478 attgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttg 39918577  T
Q  607 gt 608  Q
    ||    
T  39918578 gt 39918579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 3735338 - 3735429
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  3735338 tttttgttttatacgatttttggaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 3735429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 6284429 - 6284322
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattcta-ttttggtattttagacaacttgtacatgagacaaaaagt--tgttgt 600  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||| || ||||||||||  ||||||    
T  6284429 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatttttggtattttggacaacttgtacgtgggacaaaaagttgtgttgt 6284330  T
Q  601 ggtttggt 608  Q
    ||||||||    
T  6284329 ggtttggt 6284322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 527 - 598
Target Start/End: Complemental strand, 27839180 - 27839109
Alignment:
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgtt 598  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  27839180 ttatacgatttttggaggacaaaaggctattttggtattttagacaacttgtacatgagacaaaaagttgtt 27839109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 23091434 - 23091341
Alignment:
Q  505 atggcattgagtaat-ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||| |||||||||||| || ||| ||||||||||||||||    
T  23091434 atggcattgagtaatgttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaatttatacgtgagacaaaaagttgt 23091341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 40489303 - 40489396
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||||  ||||||||||||||||||||||||||  || |||||||||||||    
T  40489303 atggcattgagtaattttttgttttatacaatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgt 40489396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 510 - 597
Target Start/End: Complemental strand, 28090645 - 28090557
Alignment:
Q  510 attgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||| |||||||||||||||||| |||||||||  |||||| |||||||||||||||||||| || |||||||||||||    
T  28090645 attgagtaattttttgttttatacgatttttgagggacaaaatgttatttttgtattttagacaacttgtacgtgggacaaaaagttgt 28090557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 22493548 - 22493443
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||| |||||||||||| |||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||  ||||    
T  22493548 atggcaatgagtaattttttgttttatacgatttttgc-ggacaaaatgctattttgatattttagacaacttgtacgtgtgacaaaaagttgtgctgtg 22493450  T
Q  602 gtttggt 608  Q
    |||||||    
T  22493449 gtttggt 22493443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 34794806 - 34794959
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |         ||||||||| ||||||| |||||||||||| |||||  | ||||||| ||||    
T  34794806 gatagaacagtacaacacaaggcagaacaacacatgataaattttttgtggcattgaataattttttgttttatacgaattttggggaacaaaatgctat 34794905  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||| ||| || |||||||||||||  |||||||||||    
T  34794906 tttggtattttagacaacttatacgtgggacaaaaagttgtgatgtggtttggt 34794959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 553362 - 553469
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaagg-acaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgt 600  Q
    |||||||||| ||||||| ||||||||||||||||||  || |||||||  ||||||||||||||||||||||||||| || ||||||||||  ||||||    
T  553362 atggcattgaataattttatgttttatacgatttttggggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgt 553461  T
Q  601 ggtttggt 608  Q
    ||||||||    
T  553462 ggtttggt 553469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 5571772 - 5571668
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||  | |||||||||||||||||||||||||||| |  ||||||||||  |||||||    
T  5571772 atggcattgagtaattttttgttttatacgatttttgggggacaa--tgctattttggtattttagacaacttgtacgttggacaaaaagttgtgttgtg 5571675  T
Q  602 gtttggt 608  Q
    |||||||    
T  5571674 gtttggt 5571668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 700731 - 700625
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||| |||||||||||| |||||||| |||||| |  |||||||||  ||||||||||||||||| ||||||||| |||||||||||||  |||||||    
T  700731 atggcaatgagtaattttttgttttatatgattttcgggggacaaaataatattttggtattttagataacttgtacgtgagacaaaaagttgtgttgtg 700632  T
Q  602 gtttggt 608  Q
    |||||||    
T  700631 gtttggt 700625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 509 - 608
Target Start/End: Original strand, 31644416 - 31644518
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    |||||| ||||||| ||||||||| |||||||   ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||||||    
T  31644416 cattgaataattttatgttttatatgatttttaggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggttt 31644515  T
Q  606 ggt 608  Q
    |||    
T  31644516 ggt 31644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 425 - 608
Target Start/End: Complemental strand, 31880286 - 31880100
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt- 523  Q
    ||||||||||| |||  ||||||| ||||| | || |||| ||||||||||||||||||| |  |||||| |        ||| |||||| ||||||||     
T  31880286 gggtgtgtttgatttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaacagtacatgacaaattttttatgacattgaataatttttt 31880187  T
Q  524 gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    || |||||||||| |||  ||||||||| |||||||||||||||||||||||||||| |  |||||| ||||||  |||||||||||    
T  31880186 gtattatacgattgttgggggacaaaatgctattttggtattttagacaacttgtacgtaggacaaatagttgtgatgtggtttggt 31880100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 22432424 - 22432346
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| ||||||||||||||||  |||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  22432424 ttttttttttatacgatttttgggggacgaaatgctattttggtattttagacaacttgtacttgagacaaaaaattgt 22432346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 39788158 - 39788265
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattct-attttggtattttagacaacttgtacatgagacaaaaagttgt--tgt 600  Q
    |||| |||||||||||||| |||||||||||||||||  |||||||| | | ||||| |||||||||||||||||||| || |||||||||||||  |||    
T  39788158 atggtattgagtaattttttgttttatacgatttttgggggacaaaaatgttattttagtattttagacaacttgtacgtgggacaaaaagttgtgatgt 39788257  T
Q  601 ggtttggt 608  Q
    ||||||||    
T  39788258 ggtttggt 39788265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 8561111 - 8561006
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||| |||||||| |||||||||||||||||  |||| ||||  ||||||||||||||||||||||||||| ||  ||||||||||||  ||||    
T  8561111 atggcattgattaattttttgttttatacgatttttgg-ggacgaaatgttattttggtattttagacaacttgtacctggaacaaaaagttgtgatgtg 8561013  T
Q  602 gtttggt 608  Q
    |||||||    
T  8561012 gtttggt 8561006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 797
Target Start/End: Complemental strand, 2372635 - 2372454
Alignment:
Q  616 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatggagac 715  Q
    |||||||| |||||| ||| ||||||||||||||| ||||| || ||||||||||||||  ||||||  ||| | ||||| |||  | |  ||| | |||    
T  2372635 cactactagaaaagtctcaaataccgacggaatttggagacggaatttattccgtctctcctagagaccgaaatggagacggaaatttacaaatagtgac 2372536  T
Q  716 ggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctc 797  Q
    | ||||  | ||||||||| |||||| || |||||||||||||| ||||  | |||| |||||||||||| | |||||||||    
T  2372535 gaaattaaacttttaacattagagacagactttagagacggattttacctacccaaagttattctgtctctatttccgtctc 2372454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 24036211 - 24036302
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||  |  ||||||  ||||||||||||||||||||||||||| || || ||||||||||  |||||||||||    
T  24036211 tttttgttttatacgatttttggggtgcaaaatgttattttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttggt 24036302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 8136805 - 8136909
Alignment:
Q  505 atggcattgagtaat-ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||| ||||||||||||| ||||||   ||||||  ||  |||||||||||||||||||||||||| |  ||||||||||  |||||||    
T  8136805 atggcattgagtaatgttttgttttatactattttttggggacaatgtt--attttggtattttagacaacttgtacgtaggacaaaaagttgtgttgtg 8136902  T
Q  602 gtttggt 608  Q
    |||||||    
T  8136903 gtttggt 8136909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 505 - 612
Target Start/End: Complemental strand, 18470558 - 18470448
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| ||||| |||||| |||||||||| | ||||||  |||| ||||  ||||||||| ||||||||||||||||| || || ||||||||||  ||||    
T  18470558 atggtattgaataatttcttgttttatatgctttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgggataaaaagttgtgctgtg 18470459  T
Q  602 gtttggtaagg 612  Q
    |||||||||||    
T  18470458 gtttggtaagg 18470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 7725924 - 7725846
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  |||| |||| |||||||||   |||||||||||| ||| || |||||||||||||    
T  7725924 tttttgttttatacgatttttgggggacgaaatgctattttggatatttagacaacttatacgtgggacaaaaagttgt 7725846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 7770394 - 7770303
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||  |  | ||||  |||||| ||||||||| |||||||||| || |||||||||||||  |||||||||||    
T  7770394 tttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggt 7770303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 523 - 608
Target Start/End: Complemental strand, 32093092 - 32093005
Alignment:
Q  523 tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||  |||||||  |||| |||| |||||||||||||||||| || |||||| || |||||||||||||  |||||||||||    
T  32093092 tgttttatataatttttgggggacgaaatgctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttggt 32093005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 5673110 - 5673177
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagac 571  Q
    |||||| ||||||||||| ||||||||||||||||||  |||||||||  ||||||| ||||||||||    
T  5673110 atggcaatgagtaattttttgttttatacgatttttgggggacaaaatgttattttgatattttagac 5673177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 519 - 579
Target Start/End: Original strand, 1338601 - 1338661
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgta 579  Q
    |||||||| |||||||| ||||| ||||||||   ||||||| ||||||||||||||||||    
T  1338601 tttttgttatatacgatatttgatggacaaaaaattattttgatattttagacaacttgta 1338661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 4689813 - 4689722
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||| |||||  |  | ||||  |||||| ||||||||| |||||||||| || ||||||||||  ||||||||||||||    
T  4689813 tttttgttttatacgacttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgttgtggtttggt 4689722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 597
Target Start/End: Original strand, 5598496 - 5598539
Alignment:
Q  554 tattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||    
T  5598496 tattttgatattttagacaagttgtacgtgagacaaaaagttgt 5598539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 597
Target Start/End: Complemental strand, 11090946 - 11090905
Alignment:
Q  556 ttttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||    
T  11090946 ttttgatattttagacaacgtgtacgtgagacaaaaagttgt 11090905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 237; Significance: 1e-130; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 9 - 368
Target Start/End: Original strand, 47070 - 47421
Alignment:
Q  9 gaatataatttaattgttggttcttcttttacctattt-catttctgtgaatatctagggatgtaatcaacttgatatgagtaaaaagagagaattaacg 107  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  47070 gaatataatttaattgttggtttttcttttaccttttttcatttctgtcaatatctacggatgtaatcaacttgatatgagtaaaaagagagaattaatg 47169  T
Q  108 tctttggcctctttataaatgatcattgtagttttgttgtttttattcagaagatgatgtccgctgcaccgcaacaaagagacaatttcccggacaaact 207  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||          ||    
T  47170 tctttggcctctatataaatgatcattgtagttttgttgtttttattcagaagatgatgtccgctgcaccacaacaaagatacgattt---------gct 47260  T
Q  208 agaaagaacaatggatttgttaaaatctggtcaagagagtgtgatagatgcatcacttgaatttcttcgagtaaaagcaaagttaacggtctgttatctt 307  Q
     |||| ||||| ||| |||||||||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||| | |||||||||||||||    
T  47261 cgaaaaaacaacggaattgttaaaatctggtcaagagagtgtgataaaggcatcacttgaatatcttcaagtaaaagcaaagattacggtctgttatctt 47360  T
Q  308 ctctatctaatgaatcatcgacatatttataacaataaagggtctcaaaatgaatcctatc 368  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47361 ctctatctaatgaatcatcgacatatttataacgataaagggtctcaaaatgaatcctatc 47421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 220; Significance: 1e-120; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 616 - 957
Target Start/End: Original strand, 34585926 - 34586293
Alignment:
Q  616 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatggagac 715  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||    
T  34585926 cactactagaaaagtttcatatactgacggaatttagagacagattttattccgtctctgatagagacggaagttgagaccgaatataatgaacagagac 34586025  T
Q  716 ggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaa---nnnn 812  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  34586026 ggaattatatttttaacatcagagacggactttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaaatttctt 34586125  T
Q  813 nnnnnaattaattaaaaataactttttatccattcgct----------------------ggggccatatctcattttcacaggctccaaaatcgaattt 890  Q
         |||||||||||||||||||||||||||||||||                      ||||||||||||||||||||||||||||||||||||||||    
T  34586126 tttttaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggggccatatctcattttcacaggctccaaaatcgaattt 34586225  T
Q  891 cacttggctccaaccc-aaacccccaattttttcatccctcaacttcaaatttctgcaaagccttaaa 957  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34586226 cacttggctccaacccaaaacccccaattttttcatccctcaacttcaaatttctgcaaagccttaaa 34586293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 423 - 608
Target Start/End: Original strand, 33889127 - 33889315
Alignment:
Q  423 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt 522  Q
    |||||||||||||||||  ||||||| ||||| | || |||| ||||||||||||||||||| | ||||| | |        |||| |||||||||||||    
T  33889127 tagggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaacagcacataacaaattttttatggtattgagtaatttt 33889226  T
Q  523 -tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
     ||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  33889227 ttgttttatatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 33889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 5278958 - 5278852
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| ||||  ||||    
T  5278958 atggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgctgtg 5278859  T
Q  602 gtttggt 608  Q
    |||||||    
T  5278858 gtttggt 5278852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 509 - 608
Target Start/End: Complemental strand, 7761693 - 7761591
Alignment:
Q  509 cattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  7761693 cattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggttt 7761594  T
Q  606 ggt 608  Q
    |||    
T  7761593 ggt 7761591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 16104240 - 16104346
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||  ||||    
T  16104240 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtgctgtg 16104339  T
Q  602 gtttggt 608  Q
    |||||||    
T  16104340 gtttggt 16104346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 17540633 - 17540787
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  17540633 gatagaacagtacaacacaaggcagaacagcacatgacatattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatactat 17540732  T
Q  557 ttt-ggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||| ||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  17540733 ttttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 17540787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 32497881 - 32497987
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  32497881 atggcattgagtaattttttgttttatacgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtg 32497980  T
Q  602 gtttggt 608  Q
    |||||||    
T  32497981 gtttggt 32497987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 505 - 607
Target Start/End: Complemental strand, 30326455 - 30326350
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||    
T  30326455 atggaattgagtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtg 30326356  T
Q  602 gtttgg 607  Q
    ||||||    
T  30326355 gtttgg 30326350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 34338729 - 34338882
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  34338729 gatagaacagtacaacacaaggcagaacagcacaggacaaaatttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 34338828  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||| | || |||||||||||||  |||||||||||    
T  34338829 tttggtattttagacaacttgtgcgtgggacaaaaagttgtgctgtggtttggt 34338882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 425 - 597
Target Start/End: Original strand, 44284508 - 44284688
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaa-------cacaaggcagaatatcacatgaaannnnnnnnatggcattgagta 517  Q
    |||||||||||||||  ||||||||||||| | || |||| |||||||       |||||||||||| | ||||||| |        |||||||||||||    
T  44284508 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagtacaagatagaacacaaggcagaacagcacatgacaaattttttatggcattgagta 44284607  T
Q  518 atttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  44284608 attttttgttttatacgatttttgagggacaaaatgctattttgttattttagacaacttgtacgtgagacaaaaagttgt 44284688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 39461233 - 39461373
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttttg-ttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        |||||||||||||||||||  ||||||||||||||||| ||||||||| ||||    
T  39461233 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttattttatacgatttttgagggacaaaatgctat 39461332  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||| ||||||| ||||| ||||||||||    
T  39461333 tttggtattttagacagcttgtacgtgagataaaaagttgt 39461373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 7258815 - 7258969
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattct-a 555  Q
    ||||||| |||||||||||||||||||||  |||||| |        ||||||||||||||||||| ||||||||| |||||||| |||||||| | | |    
T  7258815 gatagaacagtacaacacaaggcagaatagtacatgacaaattttttatggcattgagtaattttttgttttatacaatttttgagggacaaaaatgtta 7258914  T
Q  556 ttttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  7258915 ttttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 7258969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 458 - 607
Target Start/End: Original strand, 2085991 - 2086143
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        ||| |||||||||||||| ||||||||||||||||||| |||||||||  |||    
T  2085991 gatagaacagtacaacacaaggcagaacaacacatgacaaattttttatgccattgagtaattttttgttttatacgatttttgagggacaaaatgttat 2086090  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttgg 607  Q
    |||||||||| ||||||||||||| ||| ||||||||||||  ||||||||||    
T  2086091 tttggtatttcagacaacttgtacgtgaaacaaaaagttgtactgtggtttgg 2086143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 37308575 - 37308727
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttttgttttatacgatttttgaaggacaaaattctatt 557  Q
    ||||||| ||||||||||||||||||| | ||||||| |        ||||||||||||||||||| | || |||||||||| | ||||||||| |||||    
T  37308575 gatagaacagtacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaatttttttgttttacgattttttagggacaaaatactatt 37308674  T
Q  558 ttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||| |||||| || ||||||||||  ||||||||||||||    
T  37308675 ttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggt 37308727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 42706324 - 42706431
Alignment:
Q  505 atggcattgagtaatttt--tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgt 600  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||  || ||||||||||  ||||||    
T  42706324 atggcattgagtaatttttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgt 42706423  T
Q  601 ggtttggt 608  Q
    ||||||||    
T  42706424 ggtttggt 42706431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 2645210 - 2645104
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||| |||||||||||||||||||||||||||  || |||||||||||||  ||||    
T  2645210 atggcattgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtg 2645111  T
Q  602 gtttggt 608  Q
    |||||||    
T  2645110 gtttggt 2645104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 9717190 - 9717296
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  9717190 atggcattgggtaattttttgtttgatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtg 9717289  T
Q  602 gtttggt 608  Q
    |||||||    
T  9717290 gtttggt 9717296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 9733054 - 9732948
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| || ||||||||||  |||||||    
T  9733054 atggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtg 9732955  T
Q  602 gtttggt 608  Q
    |||||||    
T  9732954 gtttggt 9732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 19513813 - 19513707
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| |||||||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  19513813 atggtattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtg 19513714  T
Q  602 gtttggt 608  Q
    |||||||    
T  19513713 gtttggt 19513707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 35114751 - 35114857
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||| |  |||||||    
T  35114751 atggcaatgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtg 35114850  T
Q  602 gtttggt 608  Q
    |||||||    
T  35114851 gtttggt 35114857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 520 - 611
Target Start/End: Complemental strand, 16177991 - 16177898
Alignment:
Q  520 ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaag 611  Q
    |||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  16177991 ttttgttttatacgatttttgggggacgaaattccattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaag 16177898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 509 - 608
Target Start/End: Original strand, 4641486 - 4641588
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    |||||||||||||| ||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||  ||||||||||||||||  ||||||||    
T  4641486 cattgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttaaacaacttgtatgtgagacaaaaagttgtgctgtggttt 4641585  T
Q  606 ggt 608  Q
    |||    
T  4641586 ggt 4641588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 509 - 608
Target Start/End: Complemental strand, 12672594 - 12672492
Alignment:
Q  509 cattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggttt 605  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| || || ||||| |  |||||||||||    
T  12672594 cattgagtaattttttgttttatacgatttttggaggacaaaatgctattttggtattttagacaacttgtacttgggataaaaacttgtgttgtggttt 12672495  T
Q  606 ggt 608  Q
    |||    
T  12672494 ggt 12672492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 518 - 608
Target Start/End: Complemental strand, 40832579 - 40832487
Alignment:
Q  518 atttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||||||||  |||| |||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||    
T  40832579 atttttgttttatacgatttttgggggacgaaatactattttggtattttagactacttgtacgtgagacaaaaagttgtgttgtggtttggt 40832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 30798598 - 30798507
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| || || ||||||||||  |||||||||||    
T  30798598 tttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgatgtggtttggt 30798507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 18685802 - 18685908
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||||  ||||||  ||||||||||||||||||| || |||||||||||||  ||||    
T  18685802 atggcattgagtaattttttgttttataggatttttgagggacaaaatgttattttaatattttagacaacttgtacgtgggacaaaaagttgtgctgtg 18685901  T
Q  602 gtttggt 608  Q
    |||||||    
T  18685902 gtttggt 18685908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 33366576 - 33366682
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| ||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||  || || |||||||  |||||||    
T  33366576 atggcattgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggagaaaaagttgtgttgtg 33366675  T
Q  602 gtttggt 608  Q
    |||||||    
T  33366676 gtttggt 33366682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 37003992 - 37003886
Alignment:
Q  505 atggcattgagtaatttttg-ttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| ||||||||  ||||||||||||||||| |||||||||  |||||||||||||||||||| |||||| || ||||||||||  |||||||    
T  37003992 atggcattgaataattttttattttatacgatttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtg 37003893  T
Q  602 gtttggt 608  Q
    |||||||    
T  37003892 gtttggt 37003886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 10399994 - 10399901
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| |||||||| ||||||||||| |||||  ||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||    
T  10399994 atggcattgaataattttttgttttatacgacttttgggggacaaaatgctattttggatttttagacaacttatacatgagacaaaaagttgt 10399901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 505 - 592
Target Start/End: Complemental strand, 18793385 - 18793297
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    |||| |||||||||||||| ||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||||| |||||| ||||    
T  18793385 atgggattgagtaattttttgttttatacaatttttggaggacaaaatgttattttggtattttagacaacttgtacgtgagactaaaa 18793297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 3913584 - 3913478
Alignment:
Q  505 atggcattgagtaat-ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| |||| |||||||||||||||||||||  |  |||||| |||||||||||||||||||||||||||| ||  |||||||||  |||||||    
T  3913584 atggcattgaataatattttgttttatacgatttttggggagcaaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtgttgtg 3913485  T
Q  602 gtttggt 608  Q
    |||||||    
T  3913484 gtttggt 3913478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 26418889 - 26418995
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||| ||||||||||| |||||||||| |||||||  ||| |||||  ||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  26418889 atggcaatgagtaattttttgttttatacaatttttgggggataaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtg 26418988  T
Q  602 gtttggt 608  Q
    |||||||    
T  26418989 gtttggt 26418995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 12939409 - 12939318
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||| ||||||||  |||||||||  ||||||||||| ||||||||||||||| ||||| ||||||||||  |||||||||||    
T  12939409 tttttgttttatatgatttttgggggacaaaatgttattttggtatcttagacaacttgtacgtgagataaaaagttgtgctgtggtttggt 12939318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 42365496 - 42365636
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||| |||||||   |||||||||  |||    
T  42365496 gatagaacagtacaacacaaggcagaacaacacaagataaattttttatggcattgagtaattttttgttttatatgatttttaggggacaaaatgttat 42365595  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||| | ||| | ||||||||||    
T  42365596 tttggtattttagacaacttgtccgtgatataaaaagttgt 42365636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 616 - 671
Target Start/End: Original strand, 34580177 - 34580232
Alignment:
Q  616 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtc 671  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  34580177 cactactagaaaagtttcatatactgacggaatttagagacagattttattccgtc 34580232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 505 - 580
Target Start/End: Complemental strand, 32766629 - 32766553
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtac 580  Q
    |||||||||| |||||||| ||||||||||||||||| ||||| ||||  ||||||||||||||||||||| |||||    
T  32766629 atggcattgaataattttttgttttatacgatttttggaggacgaaatgttattttggtattttagacaacctgtac 32766553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 11114838 - 11114944
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||| |||||||| ||||||||||||| ||   |||| |||| ||||||||| |||||||||||||||| | || |||||||||||||  ||||    
T  11114838 atggcattgaataatttttcgttttatacgattgttagcggacgaaatactattttggaattttagacaacttgtgcgtgggacaaaaagttgtgatgtg 11114937  T
Q  602 gtttggt 608  Q
    |||||||    
T  11114938 gtttggt 11114944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 13829419 - 13829497
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||| ||||||||| |||| ||||  ||||||||| ||||||| ||||||||| || |||||||||||||    
T  13829419 tttttgttttatatgatttttgagggacgaaatgatattttggtgttttagataacttgtacctgggacaaaaagttgt 13829497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 517 - 608
Target Start/End: Complemental strand, 28824668 - 28824575
Alignment:
Q  517 aatttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||| |||||||  |  | |||| ||||||| ||||||||||||||||| || ||||| ||||||||||  |||||||||||    
T  28824668 aatttttgttttatacaatttttggggtgcgaaatgctattttagtattttagacaacttgcacgtgagataaaaagttgtgatgtggtttggt 28824575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 40692271 - 40692369
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||        || ||||||||||||||||||| || |||||||||||||  ||||    
T  40692271 atggcattgaataattttttgttttatacgatttttgagggacaaaa--------tgctattttagacaacttgtacgtgggacaaaaagttgttctgtg 40692362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 6896134 - 6896227
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| ||||| |||||| |||||||||| |  |||||  |||| |||| |||||||||| ||||||||||||||||| || |||||||||||||    
T  6896134 atggtattgaataatttcttgttttatatgccttttgggggacgaaatgctattttggtgttttagacaacttgtacgtgggacaaaaagttgt 6896227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 527 - 597
Target Start/End: Original strand, 41934570 - 41934640
Alignment:
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| ||||||||  |||||||||  ||||||||||||||||||||||| ||| |  |||||||||||||    
T  41934570 ttatatgatttttggtggacaaaatgttattttggtattttagacaacttatacgtaggacaaaaagttgt 41934640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 520 - 597
Target Start/End: Complemental strand, 18127096 - 18127019
Alignment:
Q  520 ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||| ||| || ||||| ||||||||   ||||||| ||||||| | ||||||||| ||||||||||||||||    
T  18127096 ttttgttttgtacaatgtttgatggacaaaacgttattttgctattttacataacttgtacttgagacaaaaagttgt 18127019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 26796218 - 26796286
Alignment:
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttg 596  Q
    ||||| ||||||||  ||||||||  |||||| ||||||||||||||||||||| || ||||||||||||    
T  26796218 ttatatgatttttggtggacaaaagactattt-ggtattttagacaacttgtacgtgtgacaaaaagttg 26796286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 548 - 597
Target Start/End: Complemental strand, 38993151 - 38993102
Alignment:
Q  548 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| ||||||| |||||||||||||||||||| || |||||||||||||    
T  38993151 aaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgt 38993102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 554 - 608
Target Start/End: Complemental strand, 41366184 - 41366128
Alignment:
Q  554 tattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||||||||||||||||  ||||||||||| |  ||||||||||||||    
T  41366184 tattttggtattttagacaacttgtatgtgagacaaaaaattgtgttgtggtttggt 41366128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 20907570 - 20907661
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||| |||||||||||  ||| |||||  |||||| |||||||| |||| ||||||||  |||||||| ||||  |||||||||||    
T  20907570 tttttgttttgtacgatttttgggggataaaatgttattttagtattttatacaatttgtacataggacaaaaaattgttctgtggtttggt 20907661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 615 - 914
Target Start/End: Complemental strand, 11198350 - 11198050
Alignment:
Q  615 acactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatggaga 714  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||    
T  11198350 acactactagaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagacggaagttgagaccg-atataatgaacagaga 11198252  T
Q  715 cggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaa---nnn 811  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||          
T  11198251 cggaattttatttttaacatc-gagacagactttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcacacaggtcaaatttct 11198153  T
Q  812 nnnnnnaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaaacc 911  Q
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11198152 ttttttaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaaaac 11198053  T
Q  912 ccc 914  Q
    |||    
T  11198052 ccc 11198050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 1344872 - 1344719
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||| ||||| ||||||||| |        ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  1344872 gatagaacagtacaacacaagacagaacatcacatgacaatttttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 1344773  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  1344772 tttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 1344719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 466 - 597
Target Start/End: Complemental strand, 53557952 - 53557820
Alignment:
Q  466 agtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtat 564  Q
    ||||||||||||||||||| | ||||||| |        ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  53557952 agtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtat 53557853  T
Q  565 tttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||| ||||||||||||||||    
T  53557852 tttagacaacttgtacgtgagacaaaaagttgt 53557820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 428 - 597
Target Start/End: Original strand, 44116829 - 44116999
Alignment:
Q  428 tgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgtt 526  Q
    ||||||||||||  ||||||||||||| | ||||||| ||||||||||||| ||||| | |||| || |        |||||||||||||||||| ||||    
T  44116829 tgtgtttggtttgcaaaacagcaagtactggatagaacagtacaacacaagtcagaacagcacaggacaaattttttatggcattgagtaattttttgtt 44116928  T
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| || |||||||||||||    
T  44116929 ttatacgatttttgagggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgt 44116999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 425 - 608
Target Start/End: Complemental strand, 20609846 - 20609660
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt- 523  Q
    |||||||||||||||  ||||||| ||||| | || |||| ||||||||||||||||||| | |||| || |        ||| |||||||||||||||     
T  20609846 gggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaacagcacaggacaaattttttatgacattgagtaatttttt 20609747  T
Q  524 gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  20609746 gttatatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 20609660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 425 - 608
Target Start/End: Original strand, 34026554 - 34026740
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-t 523  Q
    |||||||||||||||  ||||||| ||||| | || |||| ||||||||||||||||||| | |||| || |        |||| ||||||||||||| |    
T  34026554 gggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaacagcacaggacaaattttttatggtattgagtaatttttt 34026653  T
Q  524 gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||| |  ||||||||||||||    
T  34026654 gttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggt 34026740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 12349336 - 12349183
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  12349336 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 12349237  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||| ||||||||  |||||||||||    
T  12349236 tttggtattttagacaacttgtacgtgggacataaagttgtgctgtggtttggt 12349183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 28675710 - 28675863
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  28675710 gatagaacagtacaacacaaggcagaacaacacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 28675809  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  28675810 tttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 28675863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 21221478 - 21221372
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  21221478 atggcattgagtaattttttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtg 21221379  T
Q  602 gtttggt 608  Q
    |||||||    
T  21221378 gtttggt 21221372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 429 - 608
Target Start/End: Complemental strand, 42636597 - 42636415
Alignment:
Q  429 gtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttt 527  Q
    |||||||||||  |||||| |||||| | || |||||||||||||||||||||||| | |||| || |        |||||||| |||||||||| ||||    
T  42636597 gtgtttggtttgcaaaacaacaagtactagacagaatagtacaacacaaggcagaacagcacaggacaaattttttatggcattaagtaattttttgttt 42636498  T
Q  528 tatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    || ||||||||||| |||||||||  ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  42636497 taaacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 42636415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 4851574 - 4851481
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  4851574 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 4851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 508 - 608
Target Start/End: Original strand, 29584845 - 29584948
Alignment:
Q  508 gcattgagtaatttttg-ttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtt 604  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||    
T  29584845 gcattgagtaattttttattttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtt 29584944  T
Q  605 tggt 608  Q
    ||||    
T  29584945 tggt 29584948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 40094423 - 40094576
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| | ||||||||||||||||| | ||||||| |        |||||||||||||||||| |||||||| |||||||||| ||||||||| ||||    
T  40094423 gatagaacaatacaacacaaggcagaacaacacatgacaaaatttttatggcattgagtaattttttgttttatgcgatttttgagggacaaaatgctat 40094522  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||| |||||| ||| ||||||||||||  |||||||||||    
T  40094523 tttggtattttagacaatttgtacgtgaaacaaaaagttgtgatgtggtttggt 40094576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 509 - 597
Target Start/End: Complemental strand, 47958546 - 47958457
Alignment:
Q  509 cattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  47958546 cattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 47958457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 26282552 - 26282412
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||| ||||| | ||||||| |        |||||||||| |||||||| |||||||||||||||||| ||||||||| ||||    
T  26282552 gatagaacagtacaacacaagacagaacagcacatgacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctat 26282453  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||| ||| || |||||||||||||    
T  26282452 tttggtattttagacaacttatacgtgggacaaaaagttgt 26282412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 24571248 - 24571354
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||| ||||||||| |||||||||  ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||  ||||    
T  24571248 atggcattgagtaatttgttgttttattcgatttttgggggacaaaatcctatttttgtattttagacaacttgtacatgggacaaaaagttgtgctgtg 24571347  T
Q  602 gtttggt 608  Q
    |||||||    
T  24571348 gtttggt 24571354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 25860539 - 25860433
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||| |||||||||||| ||||||||||||||||| || ||||||| |||||| ||||||||||||||||||||| ||||||||||||||||  ||||    
T  25860539 atggcaatgagtaattttttgttttatacgatttttggagaacaaaatgctatttcggtattttagacaacttgtacgtgagacaaaaagttgtgatgtg 25860440  T
Q  602 gtttggt 608  Q
    |||||||    
T  25860439 gtttggt 25860433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 2134990 - 2135143
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||||||||||||| ||||||| | ||||    
T  2134990 gatagaacagtacaacacaaggcagaacaacacaagacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaagtgctat 2135089  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||| || |||||| || |||||||||||||  |||||||||||    
T  2135090 tttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttggt 2135143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 508 - 608
Target Start/End: Complemental strand, 39052953 - 39052850
Alignment:
Q  508 gcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtt 604  Q
    |||||||||||||| |||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||| || ||||||||||  ||||||||||    
T  39052953 gcattgagtaatttgttgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtt 39052854  T
Q  605 tggt 608  Q
    ||||    
T  39052853 tggt 39052850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 51259945 - 51259805
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||||||||||||||||||| |||||||| ||||||| | |||||||||  |||    
T  51259945 gatagaacagtacaacacaaggcagaacagcacaagacaaaatttttatggcattgagtaattttttgttttatatgatttttaagggacaaaatgttat 51259846  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  51259845 tttggtattttagacaacttgtacgtgggacaaaaagttgt 51259805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 505 - 612
Target Start/End: Complemental strand, 25927445 - 25927335
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||||| |||||| |||||||||||||||||| | |||||||  ||||||||||||||||||||||||||| || ||||||||||  |||||||    
T  25927445 atggcattgagtgattttttgttttatacgatttttgaggaacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtg 25927346  T
Q  602 gtttggtaagg 612  Q
     ||||||||||    
T  25927345 ttttggtaagg 25927335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 505 - 607
Target Start/End: Complemental strand, 3864792 - 3864688
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||||| |||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||| || ||||||||||  |||||||    
T  3864792 atggcattgagtaattttttgttttatatgatttttgg-ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtg 3864694  T
Q  602 gtttgg 607  Q
    ||||||    
T  3864693 gtttgg 3864688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 33364881 - 33364803
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  33364881 tttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgagacaaaaagttgt 33364803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 38213321 - 38213414
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||| ||||||||||| ||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  38213321 atggcaatgagtaattttttgttttatacgatttttgggggacaaaatggtattttggtattttagacaacttgtacgtgggacaaaaagttgt 38213414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 508 - 597
Target Start/End: Complemental strand, 45691015 - 45690926
Alignment:
Q  508 gcattgagtaatttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||| | |||||||||||||||||||||| | | ||||||||||||||||    
T  45691015 gcattgaataatttttgttttatacgatttttggaggacgaaatgcgattttggtattttagacaacttatgcgtgagacaaaaagttgt 45690926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 29646048 - 29646139
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||||||||| || |||||||||||||  |||||||||||    
T  29646048 tttttgttttatacgatttttgggggacaaaatgctattttggtattttaaacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 29646139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 3695410 - 3695304
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||| ||||||||||| |||||||  ||| ||||| |||||||||||||||||||||||||||| || ||||||| |||||  ||||    
T  3695410 atggcattgagtaatttgttgttttatacaatttttgggggataaaatactattttggtattttagacaacttgtacgtgggacaaaaggttgtgatgtg 3695311  T
Q  602 gtttggt 608  Q
    |||||||    
T  3695310 gtttggt 3695304  T

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Target: chr3; HSP #28
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 21373898 - 21374003
Alignment:
Q  505 atggcattgagtaatttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtgg 602  Q
    |||||||||| |||||||| ||||||||||||||||   ||  |||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||    
T  21373898 atggcattgaataatttttattttatacgatttttggccgaagaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgg 21373997  T
Q  603 tttggt 608  Q
    ||||||    
T  21373998 tttggt 21374003  T

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Target: chr3; HSP #29
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 31883125 - 31883047
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  31883125 tttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 31883047  T

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Target: chr3; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 5442258 - 5442351
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| ||||||| ||||||||||||||||||| ||| ||||| |||||||| ||||||||||| ||||||| || |||||||||||||    
T  5442258 atggcattgaataattttttgttttatacgatttttgagggataaaatgctattttgatattttagacagcttgtacgtgggacaaaaagttgt 5442351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 54622914 - 54622821
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| |||||||| |||||||||||||||||  |||| |||| |||||||||||||||||||||||||||| || || ||||||||||    
T  54622914 atggcattgaataattttttgttttatacgatttttgggggacgaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgt 54622821  T

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Target: chr3; HSP #32
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 505 - 579
Target Start/End: Original strand, 20255012 - 20255087
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgta 579  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||||    
T  20255012 atggcattgagtaattttttgttttataagatttttgagggacaaaatgttattttggtattttagacaacttgta 20255087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 53046759 - 53046692
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagac 571  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||    
T  53046759 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagac 53046692  T

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Target: chr3; HSP #34
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 510 - 608
Target Start/End: Original strand, 3964261 - 3964361
Alignment:
Q  510 attgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttg 606  Q
    ||||| ||||||| ||||||||| ||||||||  |||| |||| ||||||||||||||||||||||||||||||| |||||||||||||  |||||||||    
T  3964261 attgaataattttatgttttatatgatttttgg-ggacgaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttg 3964359  T
Q  607 gt 608  Q
    ||    
T  3964360 gt 3964361  T

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Target: chr3; HSP #35
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 51296548 - 51296654
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||| ||||||||||||| |||||||||||||||||   ||||||||| ||||||| |||||||||||||||||||| |  |||||||| |  |||||||    
T  51296548 atggtattgagtaattttttgttttatacgattttttggggacaaaatgctatttttgtattttagacaacttgtacttaggacaaaaaattgtgttgtg 51296647  T
Q  602 gtttggt 608  Q
    |||||||    
T  51296648 gtttggt 51296654  T

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Target: chr3; HSP #36
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 41695004 - 41694926
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  ||||||||| ||||||  |||||||||||||||||||  || |||||||||||||    
T  41695004 tttttgttttatacgatttttgggggacaaaatgctatttcagtattttagacaacttgtatgtgggacaaaaagttgt 41694926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 519 - 592
Target Start/End: Original strand, 32621851 - 32621924
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    |||||||| ||||| |||||||| |||||| ||  |||||||||||||||||||||||||||||| ||||||||    
T  32621851 tttttgttgtatacaatttttgatggacaacatattattttggtattttagacaacttgtacatgggacaaaaa 32621924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 49749014 - 49748923
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||||||||||||  |||| ||||  ||||||||||||| | ||||||||||| || ||||||||||  ||||||||||||||    
T  49749014 tttttgttttatacgatttttgggggacgaaatgttattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 49748923  T

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Target: chr3; HSP #39
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 50678780 - 50678871
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||| ||||| ||  | |  |||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  50678780 tttttgttttataggatttatgtggaatgaaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 50678871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 3867767 - 3867661
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| ||||| |||||| |||||||||| ||||||||  ||||||||| |||||||||| ||||||| ||||||||| |  |||||||||||||  ||||    
T  3867767 atggtattgaataatttcttgttttatatgatttttgggggacaaaatgctattttggtgttttagaaaacttgtacgtaggacaaaaagttgtgctgtg 3867668  T
Q  602 gtttggt 608  Q
    |||||||    
T  3867667 gtttggt 3867661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 51925326 - 51925220
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| |||||||| |||||||||||||||||  |||| ||||  ||||||||||||  | ||||||||||| || ||||||||||  |||||||    
T  51925326 atggcattgaataattttttgttttatacgatttttgggggacgaaatgttattttggtattaaaaacaacttgtacgtgggacaaaaagttgtgttgtg 51925227  T
Q  602 gtttggt 608  Q
    |||||||    
T  51925226 gtttggt 51925220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 50386559 - 50386481
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||| |||||||  | ||||||| |||||||| ||||||||||||||||||| |  |||||||||||||    
T  50386559 tttttgttttatacaatttttggggaacaaaatgctattttgatattttagacaacttgtacgtaggacaaaaagttgt 50386481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 543 - 608
Target Start/End: Original strand, 19906768 - 19906835
Alignment:
Q  543 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||    
T  19906768 ggacgaaatgctattttggtgttttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 19906835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 519 - 580
Target Start/End: Original strand, 10747199 - 10747261
Alignment:
Q  519 tttttgttttatacgatttttgaagg-acaaaattctattttggtattttagacaacttgtac 580  Q
    ||||||||||||||||||||||  || ||||||| |||||||| |||||||||||||||||||    
T  10747199 tttttgttttatacgatttttggggggacaaaatgctattttgatattttagacaacttgtac 10747261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 554 - 597
Target Start/End: Complemental strand, 14155528 - 14155485
Alignment:
Q  554 tattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||    
T  14155528 tattttgatattttagacaacttgtacttgagacaaaaagttgt 14155485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 519 - 607
Target Start/End: Original strand, 44267724 - 44267814
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttgg 607  Q
    ||||||||||||| |||||||| | ||| |||| ||||||| ||||||||||||| |||||  || || |||||||  |||||||||||||    
T  44267724 tttttgttttatatgatttttggatgacgaaatgctatttttgtattttagacaatttgtatgtgggataaaaagttatgttgtggtttgg 44267814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 519 - 576
Target Start/End: Original strand, 25395596 - 25395653
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaactt 576  Q
    |||||||||||||||||||||   | |||||||  |||||||||||||||||||||||    
T  25395596 tttttgttttatacgatttttagtgaacaaaatgttattttggtattttagacaactt 25395653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 44000228 - 44000321
Alignment:
Q  505 atggcattgagtaatttttgtt-ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| ||||| ||||||||| | ||||||||||||||  ||||||||  ||||||| |||||| ||| ||||||||| || |||||||| ||||    
T  44000228 atggtattgaataatttttggtcttatacgatttttggtggacaaaaaactatttttgtatttcagataacttgtacgtgggacaaaaaattgt 44000321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 544 - 592
Target Start/End: Complemental strand, 39215547 - 39215499
Alignment:
Q  544 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    ||||||||  ||||||||||||||||||||||||||| || ||||||||    
T  39215547 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 39215499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 597
Target Start/End: Complemental strand, 8648625 - 8648582
Alignment:
Q  554 tattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||| |||||| || |||||||||||||    
T  8648625 tattttggtattttagacaatttgtacttgtgacaaaaagttgt 8648582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 551
Target Start/End: Original strand, 43175536 - 43175583
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaat 551  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||    
T  43175536 atggtattgagtaattttttgttttatacgatttttgagggacaaaat 43175583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 525 - 590
Target Start/End: Original strand, 19190651 - 19190716
Alignment:
Q  525 ttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaa 590  Q
    ||||||||||||||||  || |||||  ||||||| |||||||||| ||||||||  |||||||||    
T  19190651 ttttatacgatttttggtggtcaaaaaactatttttgtattttagataacttgtatgtgagacaaa 19190716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 597
Target Start/End: Complemental strand, 22484817 - 22484768
Alignment:
Q  548 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| ||||||| |||||||||||||||| ||| || |||||||||||||    
T  22484817 aaatgctatttttgtattttagacaacttatacgtgggacaaaaagttgt 22484768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 4e-41; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 425 - 608
Target Start/End: Original strand, 4052368 - 4052552
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttttg 524  Q
    |||||||||||||||  ||||||||||||| | || |||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| |    
T  4052368 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaatttt-g 4052466  T
Q  525 ttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  4052467 ttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 4052552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 31513769 - 31513616
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        ||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  31513769 gatagaacagtacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctat 31513670  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| |  |||||||||||||  |||||||||||    
T  31513669 tttggtattttagacaacttgtacctaggacaaaaagttgtgctgtggtttggt 31513616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 31731983 - 31732136
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||| ||||||| ||||||| |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  31731983 gatagaacagtacaacacaagacagaatagcacatgacaaaatttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 31732082  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  31732083 tttggtattttagacaacttgtatgtgagacaaaaagttgtactgtggtttggt 31732136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 45446374 - 45446527
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  45446374 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 45446473  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  45446474 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 45446527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 6386542 - 6386648
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  6386542 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtg 6386641  T
Q  602 gtttggt 608  Q
    |||||||    
T  6386642 gtttggt 6386648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 29563412 - 29563259
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| |||||||||||||| |||| | ||||||| |        ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  29563412 gatagaacagtacaacacaaggtagaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatactat 29563313  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  29563312 tttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 29563259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 32020187 - 32020034
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  32020187 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatactat 32020088  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| ||  ||||||||||||  |||||||||||    
T  32020087 tttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttggt 32020034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 427 - 608
Target Start/End: Complemental strand, 30543239 - 30543055
Alignment:
Q  427 gtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgt 525  Q
    |||||||||||||  |||| || ||||||| || |||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| |||    
T  30543239 gtgtgtttggtttgcaaaatagtaagtattggacagaacagtacaacacaaggcagaacaacacaggacaaatattttatggcattgagtaattttatgt 30543140  T
Q  526 tttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||  |||||||||  ||||||||||||||||||||||||||| || ||| ||||||  ||||||||||||||    
T  30543139 tttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacgaaaagttgtgttgtggtttggt 30543055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 428 - 608
Target Start/End: Complemental strand, 37664499 - 37664316
Alignment:
Q  428 tgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gtt 526  Q
    ||||||||||||  ||||||||||| | | || |||| |||||||||||| |||||| | |||| || |        ||||||||||||||||||| |||    
T  37664499 tgtgtttggtttgcaaaacagcaagcactggacagaacagtacaacacaatgcagaacagcacaagacaaattttttatggcattgagtaattttttgtt 37664400  T
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||| |||||||||  |||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  37664399 ttatatgatttttgagcgacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 37664316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 8673194 - 8673088
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| || ||||||||||  |||||||    
T  8673194 atggcattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtg 8673095  T
Q  602 gtttggt 608  Q
    |||||||    
T  8673094 gtttggt 8673088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 29672462 - 29672356
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| || ||||||||||  |||||||    
T  29672462 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtg 29672363  T
Q  602 gtttggt 608  Q
    |||||||    
T  29672362 gtttggt 29672356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 32303724 - 32303618
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| || ||||||||||  |||||||    
T  32303724 atggcattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtg 32303625  T
Q  602 gtttggt 608  Q
    |||||||    
T  32303624 gtttggt 32303618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 505 - 607
Target Start/End: Original strand, 34063094 - 34063199
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  34063094 atggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtg 34063193  T
Q  602 gtttgg 607  Q
    ||||||    
T  34063194 gtttgg 34063199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 34101427 - 34101580
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| |||||| || |        ||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  34101427 gatagaacagtacaacacaaggcagaacatcacaggacaaattttttatggcgttgagtaattttttgttttatacgatttttgagggacaaaatgctat 34101526  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||||||||| ||  | |||||||  ||||||||||||||    
T  34101527 tttggtattttagacaacttgtacgtggaaaaaaaagttatgttgtggtttggt 34101580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 41709696 - 41709849
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  41709696 gatagaacagtacaacacaaggcagaacagcacaggacaatttttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 41709795  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||| ||||||||| |  |||||||||||||  |||||||||||    
T  41709796 tttggtattttagataacttgtacgttggacaaaaagttgtgctgtggtttggt 41709849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 7394953 - 7394860
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  7394953 atggcactgagtaattttttgttttatgcgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgt 7394860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 424 - 608
Target Start/End: Complemental strand, 14005264 - 14005077
Alignment:
Q  424 agggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt 523  Q
    ||||||||||||||||  ||||||||||||| | || |||| ||||||||||||| ||||| | || | || |        ||| |||||||||||||||    
T  14005264 agggtgtgtttggtttgcaaaacagcaagtactggacagaacagtacaacacaagacagaacaacataggacaaattttttatgacattgagtaattttt 14005165  T
Q  524 -gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
     ||||||||| |||||| | |||||||||  ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  14005164 tgttttatacaattttttatggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 14005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 27103878 - 27104018
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| | ||||||||||||||||| | ||||||| |        |||||||||||||||||| ||||||||| ||||||||| ||||||||| ||||    
T  27103878 gatagaacattacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctat 27103977  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| ||||||||||||||||||| || |||||||||||||    
T  27103978 tttgatattttagacaacttgtacgtgggacaaaaagttgt 27104018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 459 - 592
Target Start/End: Complemental strand, 13407120 - 13406986
Alignment:
Q  459 atagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctatt 557  Q
    |||||| ||||||||||||||||||| | ||||||| |        || |||||||||||||||| |||||||||||||||||  | ||||||| |||||    
T  13407120 atagaacagtacaacacaaggcagaacaacacatgacaaattttttatagcattgagtaattttttgttttatacgatttttggggcacaaaatgctatt 13407021  T
Q  558 ttggtattttagacaacttgtacatgagacaaaaa 592  Q
    ||||||||||||||||||||||| |||||||||||    
T  13407020 ttggtattttagacaacttgtacgtgagacaaaaa 13406986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 25478209 - 25478302
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||| |  |||||||||||||    
T  25478209 atggcattgagtaattttttgttttatacgattttttagggacaaaatactattttggtattttagacaacttgtacgtaggacaaaaagttgt 25478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 3251795 - 3251689
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| |  || ||||||||||  ||||    
T  3251795 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtaggataaaaagttgtgatgtg 3251696  T
Q  602 gtttggt 608  Q
    |||||||    
T  3251695 gtttggt 3251689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 5969003 - 5968897
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||||||||||||||| |||||| || || ||||||||||  ||||    
T  5969003 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggataaaaagttgtgctgtg 5968904  T
Q  602 gtttggt 608  Q
    |||||||    
T  5968903 gtttggt 5968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 12753464 - 12753358
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||  || ||||||||||  |||||||    
T  12753464 atggcattgagtaatttgttgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtg 12753365  T
Q  602 gtttggt 608  Q
    |||||||    
T  12753364 gtttggt 12753358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 509 - 608
Target Start/End: Original strand, 45114025 - 45114127
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    |||||| ||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| |  |||||||||||||  ||||||||    
T  45114025 cattgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacctatgacaaaaagttgtactgtggttt 45114124  T
Q  606 ggt 608  Q
    |||    
T  45114125 ggt 45114127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 10467045 - 10467123
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  10467045 tttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 10467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 17805671 - 17805750
Alignment:
Q  519 tttttgttttatacgatttttga-aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||    
T  17805671 tttttgttttatacgatttttgggaggacaaaatgttattttggtattttagacaacttgtacgtgagacaaagagttgt 17805750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 37618531 - 37618425
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| |||||||| ||||||||| |||||||  |||| |||| |||||||||||||| | ||||||||||| |||||||||||||  |||||||    
T  37618531 atggcattgaataattttttgttttatacaatttttgggggacgaaatgctattttggtatttaaaacaacttgtacgtgagacaaaaagttgtgttgtg 37618432  T
Q  602 gtttggt 608  Q
    |||||||    
T  37618431 gtttggt 37618425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 7591571 - 7591493
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||| ||| || |||||||||||||    
T  7591571 tttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttatacgtgtgacaaaaagttgt 7591493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 41548599 - 41548677
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  |||||||||  ||||||| ||||||||||||||||||| || |||||||||||||    
T  41548599 tttttgttttatacgatttttgggggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgt 41548677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 530 - 608
Target Start/End: Original strand, 21272676 - 21272756
Alignment:
Q  530 tacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| || |||||||||||||  |||||||||||    
T  21272676 tacgatttttaaaggacaaaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 21272756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 519 - 592
Target Start/End: Original strand, 22999238 - 22999311
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||||| |||||| || ||||||||    
T  22999238 tttttgttttatacgatttttggaggacaaaatgctattttgatattttagacaagttgtacgtgggacaaaaa 22999311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 514 - 595
Target Start/End: Complemental strand, 11926959 - 11926878
Alignment:
Q  514 agtaatttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 595  Q
    |||| |||| || |||||| |||||||| | ||||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  11926959 agtatttttagtcttatacaatttttgaggcacaaaagactattttggtattttagacaaattgtacatgagacaaaaagtt 11926878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 514 - 597
Target Start/End: Original strand, 11944851 - 11944934
Alignment:
Q  514 agtaatttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| |||| || |||||| |||||||| | | ||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  11944851 agtatttttagtcttatacaatttttgaggcaaaaaagactattttggtattttagacaaattgtacatgagacaaaaagttgt 11944934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 15001433 - 15001538
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||| ||||| ||||||| ||||||||| ||||||||  ||||||| | |||||||||||||||||| ||||||||| || ||||||||||  |||||||    
T  15001433 atggtattgaataattttctgttttatatgatttttgggggacaaa-tgctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtg 15001531  T
Q  602 gtttggt 608  Q
    |||||||    
T  15001532 gtttggt 15001538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 520 - 592
Target Start/End: Original strand, 6460243 - 6460315
Alignment:
Q  520 ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    |||||| ||||||||||||| | |||||||||  ||||||||||||||||||||||| ||| || ||||||||    
T  6460243 ttttgtcttatacgattttttatggacaaaatgttattttggtattttagacaacttatacgtgggacaaaaa 6460315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 519 - 612
Target Start/End: Complemental strand, 27109665 - 27109570
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaagg 612  Q
    ||||||||||||| ||||||||  |||| ||||  ||||||||||||||| |||| ||||||  | ||||||||||  ||||||||||||||||||    
T  27109665 tttttgttttatatgatttttgggggacgaaatgttattttggtattttaaacaatttgtacgcgggacaaaaagttgtgttgtggtttggtaagg 27109570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 39642864 - 39642955
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||| |||||||  |||  |||| |||||||||||||||||||||| ||||| || |||| |||||  ||||||||||||||    
T  39642864 tttttgttttatacaatttttgggggatgaaatgctattttggtattttagacaacctgtacgtgggacagaaagttgtgttgtggtttggt 39642955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 510 - 597
Target Start/End: Original strand, 15351707 - 15351794
Alignment:
Q  510 attgagtaatttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| |||||||  ||||||||||||||||   || |||||  |||||||||||||||||||| |||||  ||||||||||||||||    
T  15351707 attgaataattttgattttatacgatttttggttgataaaatgttattttggtattttagacaatttgtaactgagacaaaaagttgt 15351794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 523 - 607
Target Start/End: Original strand, 35225647 - 35225733
Alignment:
Q  523 tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttgg 607  Q
    ||||||||| ||||||||   ||| |||| ||||||| |||||||||||||||||||| || |||||||||||||  ||||||||||    
T  35225647 tgttttatatgatttttgggtgacgaaatgctatttttgtattttagacaacttgtacttgtgacaaaaagttgtgatgtggtttgg 35225733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 40389006 - 40389112
Alignment:
Q  505 atggcattgagtaatttttg-ttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||| ||||||||  ||||||||||||||||  |||| |||| ||||||||| |||| | ||||||||||  || |||||||||||||  ||||    
T  40389006 atggcattgaataattttttattttatacgatttttgggggacgaaatgctattttggcatttaaaacaacttgtatgtgggacaaaaagttgtgctgtg 40389105  T
Q  602 gtttggt 608  Q
    |||||||    
T  40389106 gtttggt 40389112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 10656810 - 10656732
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| |||||||||||||||   ||||||| |  ||||||| |||||||||||| |||||| ||||||||||||||||    
T  10656810 tttttcttttatacgattttttgtggacaaattgttattttgatattttagacaatttgtacgtgagacaaaaagttgt 10656732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 505 - 607
Target Start/End: Complemental strand, 29611194 - 29611089
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||| ||||| |||||| |||||||||| | ||||||  |||| |||| |||||||||| ||||||||||||| ||| || ||||||||||  |||||||    
T  29611194 atggtattgaataatttcttgttttatatgctttttgggggacgaaatgctattttggtgttttagacaacttttacgtgggacaaaaagttgtgttgtg 29611095  T
Q  602 gtttgg 607  Q
    ||||||    
T  29611094 gtttgg 29611089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 510 - 597
Target Start/End: Complemental strand, 16595283 - 16595195
Alignment:
Q  510 attgagtaatttttgtt-ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| ||||||||| | ||||||||||||||  | ||||||  ||||||| |||||||||| ||||||||| || |||||||||||||    
T  16595283 attgaataatttttggtcttatacgatttttggtgaacaaaaagctatttttgtattttagataacttgtacgtgggacaaaaagttgt 16595195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 30501126 - 30501217
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||  |  | ||||  |||||| ||||||||| |||||||||| || |||||||||||||  |||||||||||    
T  30501126 tttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggt 30501217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 10320416 - 10320310
Alignment:
Q  505 atggcattgagtaatttttg-ttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||| ||||| ||||||||| |||||||||||| |||   ||||||||  ||||||| ||||||||||||||||||| || |  |||||||  |||||||    
T  10320416 atggtattgaataatttttggttttatacgattgttgttagacaaaatgttattttgatattttagacaacttgtacgtgtggtaaaaagttgtgttgtg 10320317  T
Q  602 gtttggt 608  Q
    |||||||    
T  10320316 gtttggt 10320310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 527 - 597
Target Start/End: Complemental strand, 5859588 - 5859518
Alignment:
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| ||||||| | ||||||||| ||||||| |||||||||| ||||||||| |  |||||||||||||    
T  5859588 ttataagattttttatggacaaaatactattttagtattttagataacttgtacgtatgacaaaaagttgt 5859518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 543 - 593
Target Start/End: Complemental strand, 36426347 - 36426297
Alignment:
Q  543 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaag 593  Q
    ||||||||  |||||||||||||||||||||||||||  ||||||||||||    
T  36426347 ggacaaaagactattttggtattttagacaacttgtatgtgagacaaaaag 36426297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 520 - 597
Target Start/End: Complemental strand, 3361866 - 3361789
Alignment:
Q  520 ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||| ||||||||| || |  |||||||||  ||||||||||  ||||||||||||||| ||||| ||||||||||    
T  3361866 ttttgtcttatacgatgttgggtggacaaaatgttattttggtagattagacaacttgtacttgagagaaaaagttgt 3361789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 423 - 523
Target Start/End: Original strand, 37861765 - 37861865
Alignment:
Q  423 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt 522  Q
    ||||||||||||| |||  ||||||| ||||| | || |||| ||||||||||||||||||| | ||||||| |        ||||||||||||||||||    
T  37861765 tagggtgtgtttgatttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaatttt 37861864  T
Q  523 t 523  Q
    |    
T  37861865 t 37861865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 580
Target Start/End: Original strand, 37861866 - 37861901
Alignment:
Q  545 acaaaattctattttggtattttagacaacttgtac 580  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37861866 acaaaatgctattttggtattttagacaacttgtac 37861901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 519 - 561
Target Start/End: Original strand, 17520584 - 17520626
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttgg 561  Q
    ||||||||||||||||||||||  ||||||||| |||||||||    
T  17520584 tttttgttttatacgatttttgggggacaaaatgctattttgg 17520626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 427 - 472
Target Start/End: Complemental strand, 955168 - 955123
Alignment:
Q  427 gtgtgtttggtttataaaacagcaagtatttgatagaatagtacaa 472  Q
    |||||||||||||| ||||||||||||| |||| |||| |||||||    
T  955168 gtgtgtttggtttacaaaacagcaagtacttgacagaacagtacaa 955123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 519 - 580
Target Start/End: Original strand, 37474700 - 37474761
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtac 580  Q
    ||||| ||||||||||||||||  | | ||||  ||| ||||||||||||||||||||||||    
T  37474700 tttttattttatacgatttttggggaaaaaaacgctagtttggtattttagacaacttgtac 37474761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 4e-38; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 423 - 608
Target Start/End: Complemental strand, 33553041 - 33552853
Alignment:
Q  423 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt 522  Q
    |||| ||||||||||||  ||||||||||||| | || |||| |||||||||||||||| || | |||| || |        ||||||||||||||||||    
T  33553041 taggatgtgtttggtttgcaaaacagcaagtactggacagaacagtacaacacaaggcaaaacaacacaggacaaattttttatggcattgagtaatttt 33552942  T
Q  523 t-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  33552941 ttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 33552853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 466 - 608
Target Start/End: Original strand, 23521810 - 23521955
Alignment:
Q  466 agtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtat 564  Q
    ||||||||||||||||||| | ||||||| |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  23521810 agtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtat 23521909  T
Q  565 tttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||| || ||||||||||  ||||||||||||||    
T  23521910 tttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 23521955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 43641021 - 43641174
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  43641021 gatagaacagtacaacacaaggcagaacagcacaggacaaaatttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 43641120  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  43641121 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 43641174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 425 - 597
Target Start/End: Original strand, 29616059 - 29616232
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-t 523  Q
    |||||||||||||||  |||| |||||||| |||| |||| ||||||||||||| ||||| | ||||||| |        |||||||||||||||||| |    
T  29616059 gggtgtgtttggtttgcaaaatagcaagtacttgacagaacagtacaacacaagacagaacaacacatgacaaattttttatggcattgagtaatttttt 29616158  T
Q  524 gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||| | |||||||||  |||||||||||||||||||| |||||| || |||||||||||||    
T  29616159 gttttatacgatttttaagggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgt 29616232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 37865675 - 37865815
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        |||||||||| ||||||| ||||||||||||||| ||| ||||||||| ||||    
T  37865675 gatagaacagtacaacacaaggcagaacaacacatgacaatttttttatggcattgaataattttttgttttatacgatttctgagggacaaaatgctat 37865774  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37865775 tttggtattttagacaacttgtacatgggacaaaaagttgt 37865815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 55065450 - 55065344
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||||  |||||||    
T  55065450 atggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtg 55065351  T
Q  602 gtttggt 608  Q
    |||||||    
T  55065350 gtttggt 55065344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 9512504 - 9512351
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||||||| ||||| ||| ||||||| ||||||| |        ||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  9512504 gatagaatagtgcaacaaaagacagaatagcacatgacaaattttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctat 9512405  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  9512404 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 9512351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 20802695 - 20802542
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  20802695 gatagaacagtacaacacaaggcagaacaacacaggacaaattttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctat 20802596  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  20802595 tttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 20802542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 29785701 - 29785548
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        |||||||||| |||||||| |||||||||||||||||| ||||||||| ||||    
T  29785701 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctat 29785602  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaag--ttgttgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||   ||||||||||||||    
T  29785601 tttggtattttagacaacttgtacgtgggacaaaaagctgtgttgtggtttggt 29785548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 56154543 - 56154696
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| |  |||||| |        |||||||||||||||||| ||||||||| ||||||||| ||||||||| ||||    
T  56154543 gatagaacagtacaacacaaggcagaacagtacatgacaaattttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctat 56154642  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  56154643 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 56154696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 425 - 608
Target Start/End: Complemental strand, 2725329 - 2725144
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt- 523  Q
    |||||||||||||||  ||||||||||||| | || |||| | || | |||||||||||| | |||| || |        ||| |||||||||||||||     
T  2725329 gggtgtgtttggtttgcaaaacagcaagtactggacagaacaatatagcacaaggcagaacagcacaggacaaattttttatgacattgagtaatttttt 2725230  T
Q  524 gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  2725229 gttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtg-gacaaaaagttgtgatgtggtttggt 2725144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 21579948 - 21580101
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||| |||||||||||||| |||||||||||||||||| |||||| || ||||    
T  21579948 gatagaacagtacaacacaaggcagaacaacacaggacaaattttttatggtattgagtaatttttagttttatacgatttttgagggacaacatgctat 21580047  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||| |||||| ||||||||||||||||  |||||||||||    
T  21580048 tttggtattttagacaatttgtacgtgagacaaaaagttgtgatgtggtttggt 21580101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 36743805 - 36743712
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  36743805 atggcattgagtaatttgttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 36743712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 506 - 608
Target Start/End: Original strand, 24002308 - 24002414
Alignment:
Q  506 tggcattgagtaattttt-gttttatacgatttttgaaggacaaaatt-ctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||||||||||| |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  24002308 tggcattgagtaattttttgttttatacgatttttgagggacaaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtg 24002407  T
Q  602 gtttggt 608  Q
    |||||||    
T  24002408 gtttggt 24002414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 612
Target Start/End: Complemental strand, 46680627 - 46680517
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| |||||||| ||||||| | ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||  ||||    
T  46680627 atggcattgagtaattttttgttttatatgattttttagggacaaaatgctattatggtattttagacaatttgtacgtgagacaaaaagttgtgctgtg 46680528  T
Q  602 gtttggtaagg 612  Q
    |||||||||||    
T  46680527 gtttggtaagg 46680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 55593854 - 55593960
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| || || ||||||||||  ||||    
T  55593854 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggataaaaagttgtgctgtg 55593953  T
Q  602 gtttggt 608  Q
    |||||||    
T  55593954 gtttggt 55593960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 458 - 595
Target Start/End: Complemental strand, 20518186 - 20518048
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||||||||||||||||||||||| | |||| || |        ||||||||||||||||||| ||||||||  |||||||| ||||||||| ||||    
T  20518186 gatagaatagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatagaatttttgagggacaaaatgctat 20518087  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagtt 595  Q
    |||||||||||||||||||||||| || ||||| |||||    
T  20518086 tttggtattttagacaacttgtacgtgggacaagaagtt 20518048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 12600855 - 12600948
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||| |||| ||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  12600855 atggcattgagtagttttttgttttaaacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgt 12600948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 463 - 608
Target Start/End: Original strand, 34929842 - 34929990
Alignment:
Q  463 aatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaa-tttttgttttatacgatttttgaaggacaaaattctattttgg 561  Q
    |||||||||||||||||||||| | ||||||| |        |||||||| ||||| ||||||||||||||||||||||  ||||||||| ||||||||     
T  34929842 aatagtacaacacaaggcagaacagcacatgacaaaatttttatggcattcagtaaatttttgttttatacgatttttgggggacaaaatgctattttga 34929941  T
Q  562 tattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||| ||| | |||||||||||  |||||||||||    
T  34929942 tattttagacaacttgtatatggggcaaaaagttgtgctgtggtttggt 34929990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 50728030 - 50727937
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  50728030 atggcattgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgt 50727937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 50736044 - 50735951
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  50736044 atggcattgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgt 50735951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 509 - 597
Target Start/End: Original strand, 52949694 - 52949782
Alignment:
Q  509 cattgagtaatttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||| |||||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  52949694 cattgaataatttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 52949782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 9807125 - 9807231
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||| ||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| |  |||||||||||||  ||||    
T  9807125 atggcattgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtg 9807224  T
Q  602 gtttggt 608  Q
    |||||||    
T  9807225 gtttggt 9807231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 33177149 - 33177043
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||||||||||| ||||||||||||||||||  |||||||||  ||||||||||||||||||||||||| | || ||||||||||  |||||||    
T  33177149 atggcattgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtgcgtgggacaaaaagttgtgttgtg 33177050  T
Q  602 gtttggt 608  Q
    |||||||    
T  33177049 gtttggt 33177043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 38486374 - 38486268
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||| ||||||||||||| ||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||  ||||    
T  38486374 atggcgttgagtaattttttgttttatactatttttgagggacaaaatgctattttgatattttagacaacttgtacgttagacaaaaagttgtgctgtg 38486275  T
Q  602 gtttggt 608  Q
    |||||||    
T  38486274 gtttggt 38486268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 428 - 578
Target Start/End: Complemental strand, 47361603 - 47361452
Alignment:
Q  428 tgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gtt 526  Q
    ||||||||||||| ||||||  ||||||| || |||| ||||||||||||||||||| | ||||||| |        |||  |||||||||||||| |||    
T  47361603 tgtgtttggtttacaaaacaataagtattggacagaacagtacaacacaaggcagaacagcacatgacaaattttttatgatattgagtaattttttgtt 47361504  T
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgt 578  Q
    |||||||| |||| | ||||||||| ||||||||||||||||||||||||||    
T  47361503 ttatacgaatttttagggacaaaatgctattttggtattttagacaacttgt 47361452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 49152263 - 49152111
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||||||||||||||||||| |||||||||||||||||| |||||||||  |||    
T  49152263 gatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgatggacaaaatgttat 49152164  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||| ||||||||||||||||| || || |||||||  ||||||||||||||    
T  49152163 tttggt-ttttagacaacttgtacgtgggataaaaagttgtgttgtggtttggt 49152111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 52319248 - 52319398
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttttgttttatacgatttttgaaggacaaaattctatt 557  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||  |||||||||||||||||| |||||||||  ||||    
T  52319248 gatagaacagtacaacacaaggcagaacaacacaggacaaattttttatggcattgagtaattt--gttttatacgatttttgagggacaaaatgttatt 52319345  T
Q  558 ttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||  |||||||||||||||||| || |||||||||||||  |||||||||||    
T  52319346 ttgacattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 52319398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 4325760 - 4325853
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||| ||||||||||| |||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  4325760 atggcaatgagtaattttttgttttatgcgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 4325853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 468 - 608
Target Start/End: Original strand, 24210250 - 24210394
Alignment:
Q  468 tacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaatt-ctattttggtatt 565  Q
    ||||||||||||||||| | ||||||| |        |||| |||||||||||||| |||||||||||||||||| |||||||| | |||||||||||||    
T  24210250 tacaacacaaggcagaacaacacatgacaaatattttatggtattgagtaattttttgttttatacgatttttgagggacaaaaatgctattttggtatt 24210349  T
Q  566 ttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||| || || ||||||||||  |||||||||||    
T  24210350 ttagacaacttgtacgtgggataaaaagttgtgctgtggtttggt 24210394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 520 - 597
Target Start/End: Complemental strand, 44649265 - 44649188
Alignment:
Q  520 ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||    
T  44649265 ttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgt 44649188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 464 - 608
Target Start/End: Original strand, 20694299 - 20694446
Alignment:
Q  464 atagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggt 562  Q
    |||| |||||||||||||||||| ||||||| |        |||||| ||||||||||| |||||||||  |||||||  ||||||||| ||||||||||    
T  20694299 atagaacaacacaaggcagaatagcacatgacaaattttgtatggcaatgagtaattttttgttttatataatttttgggggacaaaatgctattttggt 20694398  T
Q  563 attttagacaacttgtacatgagacaaaaagtt--gttgtggtttggt 608  Q
    |||||||||||||||||| |  |||||||||||  |||||||||||||    
T  20694399 attttagacaacttgtacgttggacaaaaagttgcgttgtggtttggt 20694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 424 - 608
Target Start/End: Original strand, 36497105 - 36497292
Alignment:
Q  424 agggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt 523  Q
    |||||| |||||||||  ||||||||||||| | || | || ||||||||||||||||||| | |||| || |        || ||||||||||||||||    
T  36497105 agggtgcgtttggtttgcaaaacagcaagtactggacataacagtacaacacaaggcagaacaacacaggacaaaaaatttatagcattgagtaattttt 36497204  T
Q  524 g-ttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
      ||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||  |  |||||||||||||  |||||||||||    
T  36497205 tattttatacgatttttgagggacagaatgctattttgatattttagacaacttgtatgttggacaaaaagttgtgatgtggtttggt 36497292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 38812504 - 38812595
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||||||||||||  | ||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  38812504 tttttgttttatacgatttttgcggaacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 38812595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 21202709 - 21202814
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||| |||||||||||| |||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||| || ||||||||||  |||||||    
T  21202709 atggcaatgagtaattttttgttttatacgatttttgg-ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtg 21202807  T
Q  602 gtttggt 608  Q
    |||||||    
T  21202808 gtttggt 21202814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 509 - 591
Target Start/End: Original strand, 54542963 - 54543046
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaa 591  Q
    |||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| || |||||||    
T  54542963 cattgagtaattttttgttttatacgatttttgagggacaaaatgatattttggtattttagacaacttgtacgtgggacaaaa 54543046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 47642593 - 47642515
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  47642593 tttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 47642515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 520 - 597
Target Start/End: Original strand, 1231296 - 1231373
Alignment:
Q  520 ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||||| || |||||||||||||    
T  1231296 ttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgt 1231373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 7555074 - 7554981
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| |||||||| ||||||||||||||||| ||| | |||| |||||||||  ||||||||||||||||| ||||||||||||||||    
T  7555074 atggcattgaataattttttgttttatacgatttttggaggccgaaatgctattttggatttttagacaacttgtacgtgagacaaaaagttgt 7554981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 36885900 - 36886007
Alignment:
Q  505 atggcattgagtaa--tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgt 600  Q
    |||||||||||| |  ||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| |||||| || || ||||||||||  |||    
T  36885900 atggcattgagttaattttttgttttatacgatttttgagggacaaaatgctatttaggtattttagacaatttgtacgtgggataaaaagttgtgctgt 36885999  T
Q  601 ggtttggt 608  Q
    ||||||||    
T  36886000 ggtttggt 36886007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 505 - 592
Target Start/End: Original strand, 14296566 - 14296654
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    |||||||||||||||||| ||||||||||||||||||   ||||||||  ||||||||||||||||||||||||||| || ||||||||    
T  14296566 atggcattgagtaattttttgttttatacgatttttgggagacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 14296654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 505 - 592
Target Start/End: Original strand, 14314814 - 14314902
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    |||||||||||||||||| ||||||||||||||||||   ||||||||  ||||||||||||||||||||||||||| || ||||||||    
T  14314814 atggcattgagtaattttttgttttatacgatttttgggagacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 14314902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 616 - 772
Target Start/End: Complemental strand, 21987962 - 21987806
Alignment:
Q  616 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatggagac 715  Q
    |||||||| |||||| ||| ||||||||||||||||||||| |||||| |||| |||||| |||||| |||  ||||||| || | |||    | |||||    
T  21987962 cactactagaaaagtctcaaataccgacggaatttagagacggatttttttccatctctgttagagacggatattgagacggattctaacatgtagagac 21987863  T
Q  716 ggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaa 772  Q
    ||| ||| | ||||||| | ||||||||||||||||||| |||| |||| |||||||    
T  21987862 ggagtttgaattttaactttagagacggattttagagacagattttaccatcacaaa 21987806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 41711831 - 41711922
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||| ||||  |||| |||| |||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||    
T  41711831 tttttgttttatacgatatttgggggacgaaatgctattttggtattttagacaacctgtacgtgagacaaaaagttgtactgtggtttggt 41711922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 509 - 608
Target Start/End: Original strand, 32181236 - 32181338
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    |||||| ||||||| |||||||||| |||||||  |||| |||| |||||||||||||||||||||||||||| || |||||||||||||  ||||||||    
T  32181236 cattgaataattttatgttttatactatttttgggggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggttt 32181335  T
Q  606 ggt 608  Q
    |||    
T  32181336 ggt 32181338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 44324459 - 44324353
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||| |||||||| |||||||||||||||||  |||| |||| |||||||||||||| | ||||||||||| || |||||||||||||  ||||    
T  44324459 atggcattgaataattttttgttttatacgatttttgggggacgaaatgctattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgctgtg 44324360  T
Q  602 gtttggt 608  Q
    |||||||    
T  44324359 gtttggt 44324353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 6776500 - 6776653
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||||||||||| |  ||||||||  |||    
T  6776500 gatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgattttttagagacaaaatgatat 6776599  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||| | ||||||||||||| ||| || ||||||||||  ||||||||||||||    
T  6776600 tttgatgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttggt 6776653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 519 - 592
Target Start/End: Complemental strand, 50178595 - 50178522
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||| || ||||||||    
T  50178595 tttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaa 50178522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 505 - 612
Target Start/End: Original strand, 11056011 - 11056121
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| ||||||| ||||||||||||||||||| | || ||||  |||||||||||||| |||||  |||||||| |||| |||||  |||||||    
T  11056011 atggcattgaataattttttgttttatacgatttttgaggcacgaaatgttattttggtatttttgacaatctgtacatgggacataaagttgtgttgtg 11056110  T
Q  602 gtttggtaagg 612  Q
    |||||||||||    
T  11056111 gtttggtaagg 11056121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 505 - 595
Target Start/End: Original strand, 42772727 - 42772818
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 595  Q
    |||||||||||||||||| ||||||||| |||||||| |||| |||||  ||||||||||||||||| ||||| ||| || |||||||||||    
T  42772727 atggcattgagtaattttttgttttatatgatttttggaggaaaaaatgttattttggtattttagataacttatacgtgggacaaaaagtt 42772818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 527 - 597
Target Start/End: Original strand, 40792409 - 40792479
Alignment:
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||| ||||||||||||| ||||||||||||    
T  40792409 ttatacgatttttgatggacaaaaagctatttttgtattttagataacttgtacatgaaacaaaaagttgt 40792479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 505 - 589
Target Start/End: Original strand, 42869942 - 42870028
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggac-aaaattctattttggtattttagacaacttgtacatgagacaa 589  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||| ||| || |||||    
T  42869942 atggcattgagtaattttttgttttatacgatttttgagggacaaaaatgctatttttgtattttagacaacttatacgtgggacaa 42870028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 37695658 - 37695565
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| |||||||| |||||||||||||||||  |||| ||||  ||||||| ||||||||||||| ||||| || |||||||||||||    
T  37695658 atggcattgaataattttttgttttatacgatttttgggggacgaaatgttattttgatattttagacaacctgtacgtgggacaaaaagttgt 37695565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 543 - 608
Target Start/End: Complemental strand, 50729620 - 50729553
Alignment:
Q  543 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  50729620 ggacgaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 50729553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 16320490 - 16320594
Alignment:
Q  505 atggcattgagtaatttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtgg 602  Q
    |||||||||| ||||||| ||||||||||| |||||  |||  |||||||||||| ||||||||| |||| ||||| || ||||||||||  ||||||||    
T  16320490 atggcattgaataatttt-gttttatacgagttttgggggatgaaattctatttttgtattttaggcaacctgtacgtgggacaaaaagttgtgttgtgg 16320588  T
Q  603 tttggt 608  Q
    ||||||    
T  16320589 tttggt 16320594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 510 - 608
Target Start/End: Complemental strand, 22318496 - 22318395
Alignment:
Q  510 attgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttg 606  Q
    ||||| |||||| |||||||||| |||||||| | ||||||||  ||||||||| ||||||||||||| ||| | |||||||||||  ||||||||||||    
T  22318496 attgaataatttcttgttttatatgatttttggatgacaaaatgttattttggtgttttagacaacttctacgtaagacaaaaagttgtgttgtggtttg 22318397  T
Q  607 gt 608  Q
    ||    
T  22318396 gt 22318395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 505 - 592
Target Start/End: Original strand, 23327886 - 23327975
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaagg-acaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    |||||| |||||||||||| |||||||||||||||||  || | |||||  ||||||||||||||||||||||||||| || ||||||||    
T  23327886 atggcaatgagtaattttttgttttatacgatttttggggggataaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 23327975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 519 - 580
Target Start/End: Complemental strand, 56487354 - 56487293
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtac 580  Q
    ||||||||||||| |||||||| ||||||||||  ||||||||||||||| |||||||||||    
T  56487354 tttttgttttatatgatttttggaggacaaaatgttattttggtattttaaacaacttgtac 56487293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 554 - 597
Target Start/End: Complemental strand, 2630018 - 2629975
Alignment:
Q  554 tattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  2630018 tattttggtattttagacaacttgtacgtgagacaaaaagttgt 2629975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 3649605 - 3649711
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| ||||| |||||| |||||||||| | ||||||  |||| ||||  ||||||||| ||||||||||||||||| || |||||||||||||  ||||    
T  3649605 atggtattgaataatttcttgttttatatgttttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgggacaaaaagttgtgctgtg 3649704  T
Q  602 gtttggt 608  Q
    |||||||    
T  3649705 gtttggt 3649711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 508 - 589
Target Start/End: Complemental strand, 20644355 - 20644273
Alignment:
Q  508 gcattgagtaatttttg-ttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaa 589  Q
    ||||||| ||||||||| ||||||||||||||||  | |||||| |||||||| |||| ||||| |||||||||| |||||||    
T  20644355 gcattgaataatttttgattttatacgatttttggtgtacaaaaatctatttttgtatcttagataacttgtacacgagacaa 20644273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 519 - 592
Target Start/End: Complemental strand, 53200746 - 53200673
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    |||||||||| || ||||||||| |||| |||| |||||||| | ||||||||||||||||| || ||||||||    
T  53200746 tttttgttttgtatgatttttgagggacgaaatactattttgatgttttagacaacttgtacgtgggacaaaaa 53200673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 543 - 608
Target Start/End: Original strand, 28115260 - 28115327
Alignment:
Q  543 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||| |||| |||||||||||||||||||||||||||  || ||||||||||  ||||||||||||||    
T  28115260 ggacgaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggt 28115327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 37931889 - 37931995
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| |||||||| ||||||||| |||||||  |||| |||| ||||||||  |||||| ||||||||||  |  ||||||||||  |||||||    
T  37931889 atggcattgaataatttttcgttttatacaatttttgggggacgaaatgctattttgacattttaaacaacttgtatgtaggacaaaaagttgtgttgtg 37931988  T
Q  602 gtttggt 608  Q
    |||||||    
T  37931989 gtttggt 37931995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 511 - 591
Target Start/End: Original strand, 985257 - 985338
Alignment:
Q  511 ttgagtaatttttgtt-ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaa 591  Q
    |||| ||||||||| | ||||| ||||||||  ||||||||  |||||||| ||||||| |||||||||||| |||||||||    
T  985257 ttgaataatttttggtcttatatgatttttgctggacaaaagactattttgatattttaaacaacttgtacacgagacaaaa 985338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 13110297 - 13110389
Alignment:
Q  505 atggcattgagtaatttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||  ||||||||||||| || ||||||||  |||| |||| |||||||||  |||||||||| || ||| || |||||| ||||||    
T  13110297 atggcattgcataatttttgttttgtatgatttttgggggacgaaatgctattttggatttttagacaaattttacgtgggacaaacagttgt 13110389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 506 - 597
Target Start/End: Original strand, 29592865 - 29592957
Alignment:
Q  506 tggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||| ||||||| ||||||||| ||||||||  |||| |||| | |||||||  ||||||||||||| ||  || |||||||||||||    
T  29592865 tggcattgaataattttttgttttatatgatttttgggggacgaaatgccattttggatttttagacaacttttatgtgggacaaaaagttgt 29592957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 50186512 - 50186603
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||| ||||||||||||||||  |  | |||| ||||||| |||||||||||||||||||  || || |||||||  ||||||||||||||    
T  50186512 tttttattttatacgatttttggggtgcgaaatgctatttttgtattttagacaacttgtatgtgggataaaaagttgtgttgtggtttggt 50186603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 7001823 - 7001927
Alignment:
Q  505 atggcattgagtaatttttgtt-ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| ||||||||| | ||||||||||||||  |||||||  | ||||||||||||| ||||||||| |||||   |||||||||  |||||||    
T  7001823 atggcattgaataatttttggtcttatacgatttttggtggacaaatgt-tattttggtattt-agacaacttatacatagaacaaaaagttgtgttgtg 7001920  T
Q  602 gtttggt 608  Q
    |||||||    
T  7001921 gtttggt 7001927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 39078630 - 39078736
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||| ||||| |||||| || ||||||| ||||||||  |||||||||  ||||||||| |||||||||||| |||| |  |||||||| |  |||||||    
T  39078630 atggtattgaataatttcttattttatatgatttttgggggacaaaatgttattttggtgttttagacaactcgtacgtaggacaaaaatttgtgttgtg 39078729  T
Q  602 gtttggt 608  Q
    |||||||    
T  39078730 gtttggt 39078736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 43893561 - 43893639
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||  |||||||  ||||||||  ||||||| |||||||||| ||| || || ||||||||||| ||||    
T  43893561 tttttgttttatataatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgt 43893639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 530 - 592
Target Start/End: Complemental strand, 44355946 - 44355884
Alignment:
Q  530 tacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    |||||||||||| ||||||||  |||||||||||| | | ||||||||||| | |||||||||    
T  44355946 tacgatttttgatggacaaaagactattttggtatatcatacaacttgtacgtaagacaaaaa 44355884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 555 - 597
Target Start/End: Complemental strand, 45577758 - 45577716
Alignment:
Q  555 attttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||| || || |||||||||||||    
T  45577758 attttggtattttagacaacttgcacgtgggacaaaaagttgt 45577716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 6e-37; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 423 - 597
Target Start/End: Original strand, 40753043 - 40753218
Alignment:
Q  423 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt 522  Q
    |||||||||||||||||  ||||||| ||||| | || |||| |||||||||||| |||||| | |||| || |        ||||||||||||||||||    
T  40753043 tagggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaagcagaacaacacaggacaaattttttatggcattgagtaatttt 40753142  T
Q  523 -tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
     ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  40753143 ttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 40753218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 32873941 - 32873788
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  32873941 gatagaacagtacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 32873842  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||| ||||||||||||| |||||||||||||  ||||||||||||||    
T  32873841 tttggtatttcagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 32873788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 47953113 - 47953266
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  47953113 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 47953212  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  47953213 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 47953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 47947683 - 47947823
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  47947683 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 47947782  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  47947783 tttggtattttagacaacttgtacgtgggacaaaaagttgt 47947823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 11322057 - 11321904
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| |  |||||| |        ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  11322057 gatagaacagtacaacacaaggcagaacagtacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 11321958  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  11321957 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 11321904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 36769741 - 36769588
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        ||||||||||||||||||| ||||||||||||||||||  |||||||| ||||    
T  36769741 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagagacaaaatgctat 36769642  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  36769641 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 36769588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 46633620 - 46633773
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  46633620 gatagaacagtacaacacaaggcagaacaacacaagacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 46633719  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  46633720 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 46633773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 21784841 - 21784947
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||||  |||||||    
T  21784841 atggcattgagtaattttatgttttatacgatttttggaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtg 21784940  T
Q  602 gtttggt 608  Q
    |||||||    
T  21784941 gtttggt 21784947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 26994397 - 26994244
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||||||||||||||||||| |||||||||||||||| | ||||||||| ||||    
T  26994397 gatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgattttttagggacaaaatgctat 26994298  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  26994297 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 26994244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 10932682 - 10932589
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  10932682 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 10932589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 459 - 608
Target Start/End: Original strand, 18386449 - 18386601
Alignment:
Q  459 atagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctatt 557  Q
    |||||| | ||||||||||||||||| | ||||||| |        ||| |||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  18386449 atagaacaatacaacacaaggcagaacaacacatgacaaattttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 18386548  T
Q  558 ttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  18386549 ttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 18386601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 505 - 612
Target Start/End: Complemental strand, 43158811 - 43158701
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||| | ||||||||||||||||| || ||||||||||  |||||||    
T  43158811 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttgatgttttagacaacttgtacgtgggacaaaaagttgtgttgtg 43158712  T
Q  602 gtttggtaagg 612  Q
    |||||||||||    
T  43158711 gtttggtaagg 43158701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 458 - 595
Target Start/End: Original strand, 18470607 - 18470745
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        |||||||||||||||||| ||||||||| ||||||||| |||||||||  |||    
T  18470607 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgttat 18470706  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagtt 595  Q
    |||||||||||||||||||||||| || |||||||||||    
T  18470707 tttggtattttagacaacttgtacgtgggacaaaaagtt 18470745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 3922828 - 3922722
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| || |||||||||||||  ||||    
T  3922828 atggcattgagtatttttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgctgtg 3922729  T
Q  602 gtttggt 608  Q
    |||||||    
T  3922728 gtttggt 3922722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 44748665 - 44748771
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttg--ttgtg 601  Q
    |||||| ||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| || ||||||||||||  |||||    
T  44748665 atggcaatgagtaattttttgttttatacgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtattgtg 44748764  T
Q  602 gtttggt 608  Q
    |||||||    
T  44748765 gtttggt 44748771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 47316823 - 47316717
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |  |||||||||||||  |||||||    
T  47316823 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtaatttagacaacttgcatgtgagacaaaaagttgtgttgtg 47316724  T
Q  602 gtttggt 608  Q
    |||||||    
T  47316723 gtttggt 47316717  T

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Target: chr7; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 26371934 - 26371841
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| || |||||||||||||    
T  26371934 atggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgt 26371841  T

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Target: chr7; HSP #18
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 461 - 608
Target Start/End: Original strand, 29661249 - 29661399
Alignment:
Q  461 agaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctatttt 559  Q
    |||||||||||||||||||||||| | |||| || |        || ||||||||||||||| ||||||||||||||||||  ||||||||| |||||||    
T  29661249 agaatagtacaacacaaggcagaacaacacaagacaaattttttatagcattgagtaattttttgttttatacgatttttgtgggacaaaatgctatttt 29661348  T
Q  560 ggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||| ||||||||| || || ||||||||||  |||||||||||    
T  29661349 ggtattttagataacttgtacgtgggataaaaagttgtgctgtggtttggt 29661399  T

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Target: chr7; HSP #19
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 30849371 - 30849265
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||  ||||||||||||||| |||||||||| ||| ||||||||||  |||||||    
T  30849371 atggcattgagtaattttttgttttatacgatttttgggggacaaaatgttattttggtattttatacaacttgtatatgggacaaaaagttgtgttgtg 30849272  T
Q  602 gtttggt 608  Q
    |||||||    
T  30849271 gtttggt 30849265  T

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Target: chr7; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 3892198 - 3892058
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | || |||| |        ||||||||||||||||||| |||||| ||||||||||| | ||||||| ||||    
T  3892198 gatagaacagtacaacacaaggcagaacagcatatgacaaattttttatggcattgagtaattttttgttttacacgatttttgaggaacaaaatgctat 3892099  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||| |||||||||||||| |  |||||||||||||    
T  3892098 tttggtattctagacaacttgtacgtaggacaaaaagttgt 3892058  T

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Target: chr7; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 41211326 - 41211219
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaatt-ctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgt 600  Q
    ||||||||||||||||||| |||||||||||||||| | ||| |||| | |||||||||||||||||||||||||||| || |||||||||||||  |||    
T  41211326 atggcattgagtaattttttgttttatacgattttttagggataaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgt 41211227  T
Q  601 ggtttggt 608  Q
    ||||||||    
T  41211226 ggtttggt 41211219  T

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Target: chr7; HSP #22
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 459 - 608
Target Start/End: Original strand, 1870058 - 1870211
Alignment:
Q  459 atagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaagg-acaaaattctat 556  Q
    |||||| ||||||||||||||||||| | ||||||| |        ||| ||||||||||||||| ||||||||||||||||  ||| |||||||  |||    
T  1870058 atagaacagtacaacacaaggcagaacagcacatgataaattttttatgacattgagtaattttttgttttatacgatttttttagggacaaaatgttat 1870157  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||| ||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  1870158 tttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 1870211  T

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Target: chr7; HSP #23
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 26652851 - 26652929
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  26652851 tttttgttttatacgatttttggcggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 26652929  T

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Target: chr7; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 505 - 575
Target Start/End: Original strand, 16963077 - 16963149
Alignment:
Q  505 atggcattgagtaatttt--tgttttatacgatttttgaaggacaaaattctattttggtattttagacaact 575  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  16963077 atggcattgagtaatttttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaact 16963149  T

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Target: chr7; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 30599180 - 30599040
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        |||  |||||||||||| ||||||||||||||||||   |||||||||  |||    
T  30599180 gatagaacagtacaacacaaggcagaacaacacatgacaaattttttatgaaattgagtaatttgttgttttatacgatttttaggggacaaaatgttat 30599081  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||| || |||||| ||||||||||||||||    
T  30599080 tttggtattttagataatttgtacttgagacaaaaagttgt 30599040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 34117422 - 34117528
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||| |||||||| |||||||||||||||||  |||| |||| ||||||||| |||||||||||||||||||||  ||||||| ||||  ||||    
T  34117422 atggcattgaataatttttcgttttatacgatttttgggggacgaaatgctattttggcattttagacaacttgtacatggaacaaaaaattgtgatgtg 34117521  T
Q  602 gtttggt 608  Q
    |||||||    
T  34117522 gtttggt 34117528  T

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Target: chr7; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 43189415 - 43189261
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattt-ttgttttatacgatttttgaagg-acaaaattcta 555  Q
    ||||||| |||||||||||||||||||||   ||||| |        ||||||||||||||||| |||||| ||||||||||||  || ||||||| |||    
T  43189415 gatagaacagtacaacacaaggcagaatagtgcatgacaaattttttatggcattgagtaatttgttgtttcatacgatttttggggggacaaaatacta 43189316  T
Q  556 ttttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||| |||||||||||||| || || |||||||  ||||||||||||||    
T  43189315 ttttggtattctagacaacttgtacgtgggataaaaagttgtgttgtggtttggt 43189261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 34295514 - 34295436
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||| ||||||||  ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  34295514 tttttgttttatatgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 34295436  T

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Target: chr7; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 43368186 - 43368264
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||| || ||||||||| |||||||| ||||||||||||||||||| |  |||||||||||||    
T  43368186 tttttgttttatacgattttggagggacaaaatgctattttgatattttagacaacttgtacgtaggacaaaaagttgt 43368264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 329440 - 329546
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| ||||| |||||| |||||||||| ||||||||  ||||||||| |||||||||| |||||| |||||||||| || |||||||||||||  ||||    
T  329440 atggtattgaataatttcttgttttatatgatttttgggggacaaaatgctattttggtgttttaggcaacttgtacgtgggacaaaaagttgtgatgtg 329539  T
Q  602 gtttggt 608  Q
    |||||||    
T  329540 gtttggt 329546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 509 - 597
Target Start/End: Original strand, 21133345 - 21133435
Alignment:
Q  509 cattgagtaatttt--tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||  ||||||||||||||||||   ||| |||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  21133345 cattgagtaatttttttgttttatacgatttttgggagacgaaatgctattttggtattttagacaatttgtatgtgagacaaaaagttgt 21133435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 46408859 - 46408965
Alignment:
Q  505 atggcattgagtaatttttg-ttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||||||||||||  |||||||||||||||||  ||||| || |||||||| ||||||||||||||||||  |  |||||||||||||  ||||    
T  46408859 atggcattgagtaattttttattttatacgatttttgagagacaatatgctattttgatattttagacaacttgtatgtcggacaaaaagttgtgctgtg 46408958  T
Q  602 gtttggt 608  Q
    |||||||    
T  46408959 gtttggt 46408965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 43214035 - 43213944
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||| ||||||||| | || |||| ||||||||||||||| |||||||||||  || ||||||||||  ||||||||||||||    
T  43214035 tttttgttttataggatttttgaggcacgaaatgctattttggtatttttgacaacttgtatgtgggacaaaaagttgtgttgtggtttggt 43213944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 9913495 - 9913601
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| ||||| |||||||| |||||||||||||||||  |||| ||||  ||||||||||||||||||||| ||||| || || ||||||||||  ||||    
T  9913495 atggaattgaataatttttagttttatacgatttttgggggacgaaatgttattttggtattttagacaacctgtacgtgggaaaaaaagttgtgatgtg 9913594  T
Q  602 gtttggt 608  Q
    |||||||    
T  9913595 gtttggt 9913601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 9927183 - 9927289
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| ||||| |||||||| |||||||||||||||||  |||| ||||  ||||||||||||||||||||| ||||| || || ||||||||||  ||||    
T  9927183 atggaattgaataatttttagttttatacgatttttgggggacgaaatgttattttggtattttagacaacctgtacgtgggaaaaaaagttgtgatgtg 9927282  T
Q  602 gtttggt 608  Q
    |||||||    
T  9927283 gtttggt 9927289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 505 - 575
Target Start/End: Original strand, 11250592 - 11250663
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaact 575  Q
    |||| ||||||||||||| ||||||||| ||||||||| ||||||||| ||| |||||||||||||||||||    
T  11250592 atggtattgagtaattttttgttttatatgatttttgagggacaaaatgctagtttggtattttagacaact 11250663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 505 - 607
Target Start/End: Complemental strand, 41665700 - 41665595
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| ||||| ||||||| |||||||||  |||||||   ||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||  ||||    
T  41665700 atggtattgaataattttctgttttatataatttttgggtgacgaaatgctatttttgtattttagacaacttgtacgtgagacaaaaagttgtgatgtg 41665601  T
Q  602 gtttgg 607  Q
    ||||||    
T  41665600 gtttgg 41665595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 22631723 - 22631814
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||||||||||||  |||| ||||   |||||||||||||||||||||||||| |   |||||||||  ||||||||||||||    
T  22631723 tttttgttttatacgatttttgggggacgaaatatcattttggtattttagacaacttgtacgtataacaaaaagttatgttgtggtttggt 22631814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 20127274 - 20127352
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  |||| ||||   |||||||||||||| |||| |||||| || |||||||||||||    
T  20127274 tttttgttttatacgatttttgggggacgaaatgtcattttggtattttacacaaattgtacgtgggacaaaaagttgt 20127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 38301328 - 38301405
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||| ||||||||||||  |||||||||  ||||||| ||||||||||||||||| | || |||||||||||||    
T  38301328 tttttgtttaatacgatttttgggggacaaaatgttattttgatattttagacaacttgt-cgtgggacaaaaagttgt 38301405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 1363607 - 1363699
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| |||||||| ||||||||| |||||||  | || |||| ||||||| ||||||| |||||| ||||| ||||||||||||||||    
T  1363607 atggcattgaataattttttgttttatacaatttttgg-gtacgaaatgctatttttgtatttttgacaacctgtacgtgagacaaaaagttgt 1363699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 48445491 - 48445584
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| ||||| |||||| |||||||||| ||||||||  |||||||||  |||||| || ||||||||||||||||   |||||||||||||||    
T  48445491 atggtattgaataatttcttgttttatatgatttttgggggacaaaatgttattttcgtgttttagacaacttgtatgcgagacaaaaagttgt 48445584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 543 - 595
Target Start/End: Original strand, 7958635 - 7958687
Alignment:
Q  543 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 595  Q
    ||||||||  |||||||||||||||||||||||||||| | ||||||||||||    
T  7958635 ggacaaaaaactattttggtattttagacaacttgtacttcagacaaaaagtt 7958687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 17237061 - 17237139
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||| ||||||||  |||| ||||  ||||||||  ||||||| || |||||| ||||||||||||||||    
T  17237061 tttttgttttataagatttttgggggacgaaatgttattttggatttttagataatttgtacgtgagacaaaaagttgt 17237139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 37966959 - 37967037
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||   |||| |||| |||||||||  ||||||| ||||||||| ||  ||||||||||||    
T  37966959 tttttgttttatacgatttttttgggacgaaatgctattttggatttttagataacttgtacgtggaacaaaaagttgt 37967037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 423 - 484
Target Start/End: Original strand, 16962985 - 16963046
Alignment:
Q  423 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 484  Q
    |||||||||||||||||  ||||||| ||||| | || |||| |||||||||||||||||||    
T  16962985 tagggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaa 16963046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 511 - 595
Target Start/End: Complemental strand, 29992813 - 29992729
Alignment:
Q  511 ttgagtaatttttgtt-ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 595  Q
    |||| ||||||||| | ||||||||||||||  ||||||||   ||||||| ||||||||| ||||||||| ||||||||||||||    
T  29992813 ttgaataatttttggtcttatacgatttttggtggacaaaaaattattttg-tattttagataacttgtacgtgagacaaaaagtt 29992729  T

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Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 553 - 607
Target Start/End: Original strand, 34519527 - 34519583
Alignment:
Q  553 ctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttgg 607  Q
    ||||||| |||||||||||||||||||| || ||||||||||  |||||||||||||    
T  34519527 ctatttttgtattttagacaacttgtacctgggacaaaaagttgtgttgtggtttgg 34519583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 46627140 - 46627233
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| ||||||| |||||||||| |||||||   ||| |||| ||||||| |||||||||||||   |||| ||||||||||| ||||    
T  46627140 atggcattgaataattttttgttttatacaatttttgggagacgaaatactatttttgtattttagacaatccgtacgtgagacaaaaaattgt 46627233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 553 - 597
Target Start/End: Complemental strand, 8054452 - 8054408
Alignment:
Q  553 ctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||    
T  8054452 ctattttggtattttaaaaaacttgtacttgagacaaaaagttgt 8054408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 23349401 - 23349310
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||| ||||||| |||  |||| ||||   ||||| |||||||||||||||||||  || ||||||||||  ||||||||||||||    
T  23349401 tttttgttttctacgattgttgggggacgaaatgtcattttagtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggt 23349310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 596
Target Start/End: Complemental strand, 22724651 - 22724564
Alignment:
Q  510 attgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttg 596  Q
    ||||| ||||||| ||| ||||| ||||||||   ||| |||| ||||||| |||||||||||||||||||| || |||| |||||||    
T  22724651 attgaataattttctgtattatatgatttttgggcgacgaaatgctatttttgtattttagacaacttgtacgtgggacataaagttg 22724564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 472
Target Start/End: Original strand, 46408771 - 46408818
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaa 472  Q
    |||||||||||||||  ||||||||||||||| ||||||| |||||||    
T  46408771 gggtgtgtttggtttgcaaaacagcaagtattggatagaacagtacaa 46408818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 597
Target Start/End: Original strand, 48699394 - 48699461
Alignment:
Q  530 tacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||   ||||| || ||||||||||||||||||||||||||||| ||  ||||| ||||||    
T  48699394 tacgattttttgtggacataagtctattttggtattttagacaacttgtacgtggaacaaatagttgt 48699461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 15035363 - 15035285
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| |||||||||||  || ||||||  ||||||| |||||||||||| |||||  ||  ||||||||||||    
T  15035363 tttttgttttgtacgatttttggtgggcaaaatgttattttgatattttagacaatttgtatgtggtacaaaaagttgt 15035285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 505 - 607
Target Start/End: Complemental strand, 22724157 - 22724052
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt--gttgtg 601  Q
    |||| ||||| ||||||| ||| ||||| ||||||||   ||| |||| ||||||| |||||||| ||||||||||| || || ||||||||  ||||||    
T  22724157 atggtattgaataattttctgtattatatgatttttgggtgacgaaatgctatttttgtattttatacaacttgtacgtgggataaaaagttgcgttgtg 22724058  T
Q  602 gtttgg 607  Q
    ||||||    
T  22724057 gtttgg 22724052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 48894702 - 48894780
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||| ||||||||  |||||||||  ||||||||  |||||||  | |||||| || |||||||||||||    
T  48894702 tttttgttttataagatttttgggggacaaaatgttattttggatttttagatgatttgtacgtgggacaaaaagttgt 48894780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 553 - 607
Target Start/End: Complemental strand, 26910486 - 26910430
Alignment:
Q  553 ctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttgg 607  Q
    ||||||| ||||||| |||||||||||| || ||||||||||  |||||||||||||    
T  26910486 ctatttttgtatttttgacaacttgtacgtgtgacaaaaagttgtgttgtggtttgg 26910430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 519 - 580
Target Start/End: Complemental strand, 41903664 - 41903603
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtac 580  Q
    ||||||||||||| ||| ||||  ||||||||  ||||||| ||||||||||||| ||||||    
T  41903664 tttttgttttatatgatgtttggtggacaaaagactattttagtattttagacaatttgtac 41903603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 9e-36; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 425 - 597
Target Start/End: Complemental strand, 26118494 - 26118321
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt- 523  Q
    |||||||||||||||  ||||||||||||| | || |||| ||||||||||||||||||| | |||| || |        |||||||||| ||||||||     
T  26118494 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgaataatttttt 26118395  T
Q  524 gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| || |||||||||||||    
T  26118394 gttttatacgatttttgagggacaaaatgctattttggtattttagacaacttttacgtgggacaaaaagttgt 26118321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 423 - 595
Target Start/End: Complemental strand, 30105961 - 30105788
Alignment:
Q  423 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt 522  Q
    |||||||||||||||||  ||||||||||||| | || |||| ||||||||||||||||||| | |||  || |        |||||||| |||||||||    
T  30105961 tagggtgtgtttggtttgcaaaacagcaagtactggacagaacagtacaacacaaggcagaacaacactggacaaattttttatggcattaagtaatttt 30105862  T
Q  523 t-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 595  Q
    | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||    
T  30105861 ttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagtt 30105788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 28340549 - 28340409
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| |  |||||| |        ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  28340549 gatagaacagtacaacacaaggcagaacagtacatgacaatttttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 28340450  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  28340449 tttggtattttagacaacttgtacgtgagacaaaaagttgt 28340409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 844970 - 844817
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  844970 gatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 844871  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  844870 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 844817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 16451055 - 16451208
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||||||||||||||| ||||||||| |||| || |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  16451055 gatagaatagtacaacacatggcagaatagcacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 16451154  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||||||||  || ||||||||||  ||||||||||||||    
T  16451155 tttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggt 16451208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 45491121 - 45490968
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| | ||||||||||||||||| | ||||||| |        ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  45491121 gatagaacaatacaacacaaggcagaacagcacatgacaaattttgtatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 45491022  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  45491021 tttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 45490968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 1351680 - 1351528
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttttgttttatacgatttttgaaggacaaaattctatt 557  Q
    ||||||| ||||||||||||||||||| | ||||||| |        ||||||||||||| ||||||||||||| |||||||||  |||||||| |||||    
T  1351680 gatagaacagtacaacacaaggcagaacaacacatgacaaattttttatggcattgagtattttttgttttatatgatttttgagagacaaaatgctatt 1351581  T
Q  558 ttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  1351580 ttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 1351528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 16386829 - 16386935
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  16386829 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtg 16386928  T
Q  602 gtttggt 608  Q
    |||||||    
T  16386929 gtttggt 16386935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 16437337 - 16437443
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||||  |||||||    
T  16437337 atggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtg 16437436  T
Q  602 gtttggt 608  Q
    |||||||    
T  16437437 gtttggt 16437443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 42510453 - 42510606
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||| ||||||| ||||||||||||||||||| ||||||||| ||||    
T  42510453 gatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctat 42510552  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  42510553 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 42510606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 459 - 608
Target Start/End: Complemental strand, 6711291 - 6711139
Alignment:
Q  459 atagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctatt 557  Q
    |||||| ||||||||||||||||||| | |||| || |        ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||    
T  6711291 atagaacagtacaacacaaggcagaacagcacaagacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 6711192  T
Q  558 ttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||||||||||||| || |||||||| |  ||||||||||||||    
T  6711191 ttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggt 6711139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 12890166 - 12890306
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  12890166 gatagaacagtacaacacaaggcagaacagcacaggataaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctat 12890265  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||| ||||||||||||||| || |||||||||||||    
T  12890266 tttggtatcttagacaacttgtacgtgggacaaaaagttgt 12890306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 32270328 - 32270434
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||  ||||    
T  32270328 atggcattgagtaattttttgttttatatgatttttgagggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgtgctgtg 32270427  T
Q  602 gtttggt 608  Q
    |||||||    
T  32270428 gtttggt 32270434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 35387557 - 35387404
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| |||||||||||||| |||| | ||||||| |        ||||||||||||||||||| |||||||||||||||||| ||| ||||| ||||    
T  35387557 gatagaacagtacaacacaaggtagaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggataaaatgctat 35387458  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| ||  ||||||||||||  |||||||||||    
T  35387457 tttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttggt 35387404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 41972840 - 41972992
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        |||||||| |||||||||| ||||||||||||||| || |||||||||  |||    
T  41972840 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatggcattaagtaattttttgttttatacgatttt-gagggacaaaatgttat 41972938  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  41972939 tttggtattttagacaacttgtacgtgagacaaaaagttgtagtgtggtttggt 41972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 51264423 - 51264576
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||| ||||||| |||| || |        |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  51264423 gatagaacagtacaacacaagacagaatagcacaggacaaattttttatggcattgagtaattttttgttttatacgatttttaaaggacaaaatgctat 51264522  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||| |||||||| ||||||||||| || ||||||||||  ||||||||||||||    
T  51264523 tttagtattttaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 51264576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 612
Target Start/End: Original strand, 7183893 - 7184003
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||| |  ||||||||||  |||||||    
T  7183893 atggcattgagtaattttttgttttatacgatttttgagagacaaaatactatattggtattttagacaacttgtacgtaggacaaaaagttgtgttgtg 7183992  T
Q  602 gtttggtaagg 612  Q
    |||||||||||    
T  7183993 gtttggtaagg 7184003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 442 - 580
Target Start/End: Complemental strand, 20495153 - 20495014
Alignment:
Q  442 aaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttg 540  Q
    ||||||| ||||||| ||||||| ||||||||| ||||||||| | ||||||| |        ||| ||||||||||||||| ||||||||| |||||||    
T  20495153 aaaacagaaagtattggatagaacagtacaacataaggcagaacagcacatgacaaattttttatgacattgagtaattttttgttttatactatttttg 20495054  T
Q  541 aaggacaaaattctattttggtattttagacaacttgtac 580  Q
    | ||||||||| ||||||||||||||||||||||||||||    
T  20495053 agggacaaaatgctattttggtattttagacaacttgtac 20495014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 50540319 - 50540412
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||| |||||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  50540319 atggcattgagtaatttgttgttttatatgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 50540412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 519 - 612
Target Start/End: Original strand, 16704716 - 16704811
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggtaagg 612  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||  ||||||||| ||||||  |||||||||||||||    
T  16704716 tttttgttttatacgatttttggaggacaaaaagctattttggtattttagacaacttgtatgtgagacaaagagttgtgatgtggtttggtaagg 16704811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 458 - 607
Target Start/End: Original strand, 17887875 - 17888028
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattt-ttgttttatacgatttttgaagg-acaaaattcta 555  Q
    ||||||| | ||||||||||||||||| | ||||||| |        ||||||||||||||||| |||||||||||||||||||  || |||||||  ||    
T  17887875 gatagaacaatacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaatttgttgttttatacgatttttggggggacaaaatgtta 17887974  T
Q  556 ttttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttgg 607  Q
    ||||||||||||||||||||||||| || ||||||||||  |||||||||||||    
T  17887975 ttttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 17888028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 16476354 - 16476261
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| ||||||| |||||||||| |||||||  ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  16476354 atggcattgaataattttatgttttatacaatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 16476261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 17327848 - 17327755
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| ||||||||||| |||||||||||||||||||  |||||||||  ||||||||||||||||| || |||||||||||||||||||||||    
T  17327848 atggcgttgagtaatttgttgttttatacgatttttgggggacaaaatattattttggtattttagataatttgtacatgagacaaaaagttgt 17327755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 519 - 612
Target Start/End: Complemental strand, 41968033 - 41967938
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaagg 612  Q
    |||||||||||||| |||||||   |||||||  |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  41968033 tttttgttttatacaatttttgggagacaaaaggctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagg 41967938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 1601148 - 1601254
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||| |||||||||||| ||||| |||||||||||  ||||||||| |||||||||||||||||||||||||||  || ||||||||||  |||||||    
T  1601148 atggcaatgagtaattttttgttttgtacgatttttggtggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtg 1601247  T
Q  602 gtttggt 608  Q
    |||||||    
T  1601248 gtttggt 1601254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 31004107 - 31004213
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| ||||||| ||||||||| ||||||||  |||| |||| |||||||||||||||||||||||||||| || ||||||||||  |||||||    
T  31004107 atggcattgaataattttttgttttataggatttttgggggacgaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtg 31004206  T
Q  602 gtttggt 608  Q
    |||||||    
T  31004207 gtttggt 31004213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 510 - 608
Target Start/End: Complemental strand, 13994268 - 13994168
Alignment:
Q  510 attgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttg 606  Q
    ||||| ||||||| ||||||||| ||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  13994268 attgaataattttatgttttatatgatttttgg-ggacgaaatgctattttggtattttagacaacttgtacatgagacaaaaagttgtgttgtggtttg 13994170  T
Q  607 gt 608  Q
    ||    
T  13994169 gt 13994168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 38663122 - 38663200
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||||| || |||||||||||||    
T  38663122 tttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgt 38663200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 46154890 - 46154968
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||  || |||||||||||||    
T  46154890 tttttgttttataagatttttgaaggacaaaatgttattttggtattttagacaacttgtaagtgggacaaaaagttgt 46154968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 50304641 - 50304719
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||  || ||||||||||||||||    
T  50304641 tttttgttttatacgatttttggaggacaaaatgctattttgatattttagacaacttaaacgtgagacaaaaagttgt 50304719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 509 - 608
Target Start/End: Original strand, 39281873 - 39281975
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    |||||| ||||||| |||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||| |  |||||||||||||  ||||||||    
T  39281873 cattgaataattttatgttttatacgatttttggaggacgaaatgttattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggttt 39281972  T
Q  606 ggt 608  Q
    |||    
T  39281973 ggt 39281975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 44738240 - 44738135
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||| | | ||||  |||||||| ||||||||||||||||||| || |||||||||||||  ||||    
T  44738240 atggcattgagtaattttttgttttatacgatttttgaggaataaaaa-ctattttgctattttagacaacttgtacgtgggacaaaaagttgtgatgtg 44738142  T
Q  602 gtttggt 608  Q
    |||||||    
T  44738141 gtttggt 44738135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 42512954 - 42512876
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||| |  |||||||||||||    
T  42512954 tttttgttttatacgatttttgggggacaaaattctattttgatattttagacaatttgtacgtaggacaaaaagttgt 42512876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 509 - 608
Target Start/End: Complemental strand, 32289539 - 32289437
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    |||||| ||||||| |||||||||  |||||||| ||||||||| |||||||||||||||| ||||||||||| ||  ||||||||||||  ||||||||    
T  32289539 cattgaataattttatgttttatataatttttgagggacaaaatgctattttggtattttaaacaacttgtacgtggaacaaaaagttgtgctgtggttt 32289440  T
Q  606 ggt 608  Q
    |||    
T  32289439 ggt 32289437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 520 - 608
Target Start/End: Complemental strand, 50382586 - 50382496
Alignment:
Q  520 ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||| ||||||||| |||||||||  |||||| || ||||||||||||||||| || ||||||||||  ||||||||||||||    
T  50382586 ttttgttttatatgatttttgagggacaaaatgttatttttgtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 50382496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 24339883 - 24339745
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        |||||||||| |||||||| |||||||||||| ||||  ||||||  | ||||    
T  24339883 gatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgaataattttttgttttatacgatgtttgggggacaa--tgctat 24339786  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||||| || || ||||||||||    
T  24339785 tttggtattttagacaacttgtacgtgggaaaaaaagttgt 24339745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 528 - 597
Target Start/End: Complemental strand, 26764970 - 26764901
Alignment:
Q  528 tatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  26764970 tatacgatttttgagggacgaaatattattttggtattttagacaacttgtacgtgggacaaaaagttgt 26764901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 423 - 608
Target Start/End: Original strand, 34663820 - 34664008
Alignment:
Q  423 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt 522  Q
    |||||||||||||||||  ||||||| ||||| | || |||| ||||||||| |||| |||| | ||||||| |        |||||||| |||||||||    
T  34663820 tagggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacataaggtagaagagcacatgacaaattttttatggcattaagtaatttt 34663919  T
Q  523 t-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    | |||||||| |||||||||  ||||||||  ||||||| |||||||||||| || ||  || | ||||||||  ||||||||||||||    
T  34663920 ttgttttatatgatttttgagtgacaaaatgttattttgatattttagacaatttataagtgggtcaaaaagttgtgttgtggtttggt 34664008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 25539845 - 25539936
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||||||||||||  |||| |||| |||||||||||||| | ||||||||||  || ||||||||||  ||||||||||||||    
T  25539845 tttttgttttatacgatttttgggggacgaaatgctattttggtatttaaaacaacttgtaggtgggacaaaaagttgtgttgtggtttggt 25539936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 42705437 - 42705331
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||| |||||||||||| |||||||| ||||||||  ||||||||| ||||||||  |||| ||||||||||||| || ||| ||||||  |||||||    
T  42705437 atggcaatgagtaattttttgttttatatgatttttgggggacaaaatgctattttgacatttcagacaacttgtacgtgggacgaaaagttgtgttgtg 42705338  T
Q  602 gtttggt 608  Q
    |||||||    
T  42705337 gtttggt 42705331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 505 - 580
Target Start/End: Complemental strand, 3415053 - 3414976
Alignment:
Q  505 atggcattgagtaattttt--gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtac 580  Q
    |||||||||||||||||||  |||||||| ||||||||  ||||||||| |||||||||||||||| |||||| ||||    
T  3415053 atggcattgagtaatttttttgttttatatgatttttgggggacaaaatgctattttggtattttaaacaactagtac 3414976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 51703361 - 51703269
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||| ||||||||| ||||| || |||||||||  |||||| |||||||||||||| ||||  || |||||||||||||    
T  51703361 atggcattgagtaattttttgttttataccatttt-gagggacaaaatgttatttttgtattttagacaacatgtaggtgggacaaaaagttgt 51703269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 11772816 - 11772725
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||  |||| |||| |||||||||||||| | |||| |||||  || |||||||||||||  |||||||||||    
T  11772816 tttttgttttatacgatttttgggggacgaaatactattttggtatttaaaacaatttgtaggtgggacaaaaagttgtgctgtggtttggt 11772725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 15540074 - 15539983
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||| ||||||||  |||||||||  ||||||||| ||||||||||||| ||| |  |||||||||||||  |||||||||||    
T  15540074 tttttgttttatatgatttttgggggacaaaatgttattttggtgttttagacaacttctacgtatgacaaaaagttgtgctgtggtttggt 15539983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 553 - 597
Target Start/End: Original strand, 26733579 - 26733623
Alignment:
Q  553 ctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  26733579 ctattttggtattttagacaacttgtacatgaggcaaaaagttgt 26733623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 45658811 - 45658902
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||| ||||||||  |||| |||| |||||||||||||| | ||||||||||  || ||||||||||  ||||||||||||||    
T  45658811 tttttgttttatatgatttttgggggacgaaatgctattttggtatttaaaacaacttgtaggtgggacaaaaagttgtgttgtggtttggt 45658902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 509 - 580
Target Start/End: Complemental strand, 49303548 - 49303477
Alignment:
Q  509 cattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtac 580  Q
    ||||||||||||||| |||||||||||||||||  |||||||||  |||||| ||||||||||||||||||||    
T  49303548 cattgagtaattttttgttttatacgatttttgg-ggacaaaatgttattttagtattttagacaacttgtac 49303477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 6029500 - 6029394
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||| ||||| |||||| |||||||||| | ||||||  |||| ||||  ||||||||| ||||||||||||||||| || ||||||||||  |||||||    
T  6029500 atggtattgaataatttcttgttttatatgctttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgggacaaaaagttgtgttgtg 6029401  T
Q  602 gtttggt 608  Q
    |||||||    
T  6029400 gtttggt 6029394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 519 - 597
Target Start/End: Complemental strand, 25343393 - 25343315
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||| ||||| |||||||||| |||| |||| |||||||||  |||| |||||||||||| || |||||||||||||    
T  25343393 tttttgctttatgcgatttttgagggacgaaatactattttggatttttggacaacttgtacgtgcgacaaaaagttgt 25343315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 530 - 597
Target Start/End: Original strand, 46447665 - 46447732
Alignment:
Q  530 tacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||| ||||||||  |||||||| ||||||||| ||||||||| ||  ||||||||||||    
T  46447665 tacgatttttgatggacaaaagactattttgatattttagataacttgtacgtggaacaaaaagttgt 46447732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 15324147 - 15324225
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||| ||||||||| ||||| ||||||| | |||||||| |||||||||||| ||  |  ||||||||||||||||    
T  15324147 tttttgtcttatacgatgtttgatggacaaattactattttgatattttagacaatttacagttgagacaaaaagttgt 15324225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 38087195 - 38087102
Alignment:
Q  505 atggcattgagtaat-ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| |||| ||||| ||||| | |||||||  | || |||| |||||||||  ||||||||||||||||| || |||||||||||||    
T  38087195 atggcattgaataatattttgctttatgcaatttttggggaacgaaatgctattttggatttttagacaacttgtacttgggacaaaaagttgt 38087102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 510 - 597
Target Start/End: Complemental strand, 2761749 - 2761662
Alignment:
Q  510 attgagtaatttttg-ttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| ||||||||| ||||||| ||||||||  | |||||| |||||||| |||||||||| || |||||| ||||||||||| ||||    
T  2761749 attgaataatttttggttttatatgatttttgttg-acaaaaatctatttttgtattttagataatttgtacttgagacaaaaaattgt 2761662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 5109719 - 5109809
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||| |||||||| |||||||  |||||||||  |||||||  |||||||||||||||||| |  |||||||||||||  |||||||||||    
T  5109719 ttttttttttatacaatttttgggggacaaaatgttattttgc-attttagacaacttgtactttggacaaaaagttgtgatgtggtttggt 5109809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 545 - 597
Target Start/End: Original strand, 7837149 - 7837201
Alignment:
Q  545 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||| |||||||| |||||||||||||||||   ||||||||||||||||    
T  7837149 acaaaatactattttgatattttagacaacttgtctgtgagacaaaaagttgt 7837201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 527 - 597
Target Start/End: Original strand, 570384 - 570454
Alignment:
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||| |||||||  ||| |||||  ||||||| ||||||||||||||| |||  |||||||||||||||    
T  570384 ttatacaatttttggtggaaaaaatgttattttgatattttagacaacttatacgcgagacaaaaagttgt 570454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 576
Target Start/End: Original strand, 49799382 - 49799424
Alignment:
Q  534 atttttgaaggacaaaattctattttggtattttagacaactt 576  Q
    |||||| | |||||||| |||||||||||||||||||||||||    
T  49799382 attttttatggacaaaagtctattttggtattttagacaactt 49799424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 6144185 - 6144092
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| ||||| ||||||| ||||||||| ||||||||   ||||||||  |||||| || ||||||||||||| ||| || || ||||||||||    
T  6144185 atggtattgaataattttctgttttatatgatttttgggtgacaaaatgttatttttgtgttttagacaacttctacgtgggagaaaaagttgt 6144092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 5e-34; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 2614815 - 2614968
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttttg-ttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        |||||||||||||||||||  ||||||||||||||||| ||||||||| ||||    
T  2614815 gatagaacagtacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaattttttattttatacgatttttgagggacaaaatgctat 2614914  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  2614915 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 2614968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 519 - 608
Target Start/End: Original strand, 11382045 - 11382136
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  11382045 tttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 11382136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 3259649 - 3259755
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || || |||||||  |||||||    
T  3259649 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtg 3259748  T
Q  602 gtttggt 608  Q
    |||||||    
T  3259749 gtttggt 3259755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 11613954 - 11613848
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || |||||||||||||  ||||    
T  11613954 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttatacaacttgtacgtgggacaaaaagttgtgctgtg 11613855  T
Q  602 gtttggt 608  Q
    |||||||    
T  11613854 gtttggt 11613848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 459 - 597
Target Start/End: Original strand, 17867755 - 17867894
Alignment:
Q  459 atagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctatt 557  Q
    |||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  17867755 atagaacagtacaacacaaggcagaacaacacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 17867854  T
Q  558 ttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||| |||||| || |||||||||||||    
T  17867855 ttggtattttagacaatttgtacgtgggacaaaaagttgt 17867894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 459 - 597
Target Start/End: Original strand, 17877538 - 17877677
Alignment:
Q  459 atagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctatt 557  Q
    |||||| ||||||||||||||||||| | |||| || |        |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  17877538 atagaacagtacaacacaaggcagaacaacacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatt 17877637  T
Q  558 ttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||| |||||| || |||||||||||||    
T  17877638 ttggtattttagacaatttgtacgtgggacaaaaagttgt 17877677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 509 - 608
Target Start/End: Original strand, 24242634 - 24242736
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||||||    
T  24242634 cattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggttt 24242733  T
Q  606 ggt 608  Q
    |||    
T  24242734 ggt 24242736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 34176796 - 34176889
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| || |||||||||||||    
T  34176796 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagactacttgtacgtgggacaaaaagttgt 34176889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 32132590 - 32132450
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||||||||||||||||| |||||||||||||||||||  ||||||||| ||||    
T  32132590 gatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaatttgttgttttatacgatttttgggggacaaaatgctat 32132491  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| ||||||||||||||||||| || |||||||||||||    
T  32132490 tttgatattttagacaacttgtacgtgggacaaaaagttgt 32132450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 3932970 - 3932864
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  3932970 atggcattgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtg 3932871  T
Q  602 gtttggt 608  Q
    |||||||    
T  3932870 gtttggt 3932864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 11279094 - 11279200
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    ||||| |||||||||||| |||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  11279094 atggccttgagtaattttttgttttattcgatttttgagggataaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtg 11279193  T
Q  602 gtttggt 608  Q
    |||||||    
T  11279194 gtttggt 11279200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 32410062 - 32409909
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | ||||||| |        ||| |||||| |||||||| |||||||||||||||||| ||||||||| ||||    
T  32410062 gatagaacagtacaacacaaggcagaacagcacatgacaaattttttatgacattgaataattttttgttttatacgatttttgagggacaaaatactat 32409963  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||   || |||||||||||||  |||||||||||    
T  32409962 tttggtattttagacaacttgtgagtgggacaaaaagttgtgatgtggtttggt 32409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 424 - 608
Target Start/End: Complemental strand, 167167 - 166980
Alignment:
Q  424 agggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt 523  Q
    |||||||||||| | |  ||||||| || || | || |||| ||||||||||||||||||| | ||||||| |        ||| |||||||||||||||    
T  167167 agggtgtgtttgatgtgcaaaacagtaaatactggacagaacagtacaacacaaggcagaacagcacatgacaaattttttatgacattgagtaattttt 167068  T
Q  524 -gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
     |||||||| ||||||| | |||| |||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  167067 tgttttatatgatttttaagggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 166980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 508 - 608
Target Start/End: Complemental strand, 15277440 - 15277337
Alignment:
Q  508 gcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtt 604  Q
    |||||||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| || || ||||||||||  |||||||    
T  15277440 gcattgagtaatttgttgttttatacgatttttggaagacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtt 15277341  T
Q  605 tggt 608  Q
    ||||    
T  15277340 tggt 15277337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 10324274 - 10324168
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||| |||||||||||||| ||||||||||||||||   |||||||||  ||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  10324274 atgggattgagtaattttttgttttatacgattttttggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtg 10324175  T
Q  602 gtttggt 608  Q
    |||||||    
T  10324174 gtttggt 10324168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 509 - 608
Target Start/End: Original strand, 17443232 - 17443334
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    |||||| ||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| || |||||||||||||  ||||||||    
T  17443232 cattgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggttt 17443331  T
Q  606 ggt 608  Q
    |||    
T  17443332 ggt 17443334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 458 - 608
Target Start/End: Original strand, 11212176 - 11212329
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||||| |||||||||||| |||||||| |||||||||| |||||||||  |||    
T  11212176 gatagaacagtacaacacaaggcagaacagcacaggacaaatgttttatggccttgagtaattttttgttttattcgatttttgagggacaaaatgttat 11212275  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||||||||||| || |||||||||| ||  ||||||||||||||    
T  11212276 tttggtattttagacaacttgcacgtgagacaaaaggttatgttgtggtttggt 11212329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 15277147 - 15276994
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||| ||||||||| | ||||||| |        ||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  15277147 gatagaacagtacaacataaggcagaacaacacatgacaaaaattttatggcattgagtaattttttgttttataagatttttgagggacaaaatgctat 15277048  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||| | ||||||||||||||||| || || ||||||||||  |||||||||||    
T  15277047 tttgttcttttagacaacttgtacgtgggaaaaaaagttgtgatgtggtttggt 15276994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 509 - 608
Target Start/End: Original strand, 18057489 - 18057591
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    |||||| ||||||| |||||||||||||||||  ||||| |||| |||||||||||||||||||||||||||| || |||||||||||||  ||||||||    
T  18057489 cattgaataattttatgttttatacgatttttagaggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggttt 18057588  T
Q  606 ggt 608  Q
    |||    
T  18057589 ggt 18057591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 24203329 - 24203434
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| ||||||||| ||||| || |||||||||  ||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  24203329 atggcattgagtaattttttgttttatacaatttt-gagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtg 24203427  T
Q  602 gtttggt 608  Q
    |||||||    
T  24203428 gtttggt 24203434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 10485138 - 10485216
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  10485138 tttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 10485216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 520 - 597
Target Start/End: Original strand, 10959982 - 10960059
Alignment:
Q  520 ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||  ||||||||| ||||||| |||||||||||||||||||| || |||||||||||||    
T  10959982 ttttgttttatacgatttttgggggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgt 10960059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 34684132 - 34684040
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggta-ttttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| ||  |||||||||  ||||||||||||||    
T  34684132 tttttgttttatacgatttttggaggacaaaatgctattttggtatttttagacaacttgtacgtggaacaaaaagttgtgttgtggtttggt 34684040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 519 - 597
Target Start/End: Original strand, 3379691 - 3379769
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||| |||||||| ||||| |||| |||||||||||||| ||||||||||||  ||||||||||||||||    
T  3379691 tttttgttttatatgatttttggaggacgaaatgctattttggtatttaagacaacttgtatgtgagacaaaaagttgt 3379769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 509 - 612
Target Start/End: Original strand, 3290642 - 3290746
Alignment:
Q  509 cattgagtaatt-tttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgttgtggtttgg 607  Q
    |||||| ||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| ||| || || |||    |||||||||||||    
T  3290642 cattgaataattgtttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttatacgtgggaaaaagttgtgttgtggtttgg 3290741  T
Q  608 taagg 612  Q
    |||||    
T  3290742 taagg 3290746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 519 - 612
Target Start/End: Complemental strand, 8178029 - 8177934
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaagg 612  Q
    ||||||||||||| ||||||||  |||| ||||  |||||||||||||||||||||||| || || ||||||||||  ||||||||||||||||||    
T  8178029 tttttgttttatatgatttttgggggacgaaatgttattttggtattttagacaacttgaacgtgggacaaaaagttgtgttgtggtttggtaagg 8177934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 517 - 597
Target Start/End: Complemental strand, 9902808 - 9902728
Alignment:
Q  517 aatttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||| |||||| ||||||||  |||| ||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  9902808 aatttttggtttatatgatttttgggggacgaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgt 9902728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 509 - 608
Target Start/End: Complemental strand, 14925615 - 14925513
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggttt 605  Q
    |||||| ||||||| |||||||||||||||||   ||||  ||| |||||||||||||||||||||||||||  || |||||||||||||  ||||||||    
T  14925615 cattgaataattttatgttttatacgatttttaggggacggaatgctattttggtattttagacaacttgtaagtgggacaaaaagttgtactgtggttt 14925516  T
Q  606 ggt 608  Q
    |||    
T  14925515 ggt 14925513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 31870263 - 31870157
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtg 601  Q
    |||||||||| |||||||| ||||||||||| |||||  |||| |||| ||||||| |||||||||||||| | ||| || ||||||||||  |||||||    
T  31870263 atggcattgaataattttttgttttatacgagttttgggggacgaaatgctatttttgtattttagacaacctatacgtgggacaaaaagttgtgttgtg 31870164  T
Q  602 gtttggt 608  Q
    |||||||    
T  31870163 gtttggt 31870157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 520 - 597
Target Start/End: Complemental strand, 7396272 - 7396195
Alignment:
Q  520 ttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||| | |||| |||||||| ||||||||  ||||||| |||||||||| ||||||||| ||||||||||||||||    
T  7396272 ttttgtctcataccatttttgatggacaaaacactatttttgtattttagataacttgtacgtgagacaaaaagttgt 7396195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 543 - 608
Target Start/End: Complemental strand, 4494239 - 4494172
Alignment:
Q  543 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||  ||||| ||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  4494239 ggacaaaatgttatttcggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggt 4494172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 18597306 - 18597215
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||| ||||||||| |||| || | ||||||| |  ||||||||||||| ||| || ||||||||||  ||||||||||||||    
T  18597306 tttttgttttatatgatttttgagggacgaagtactattttagcgttttagacaacttatacgtgggacaaaaagttgtgttgtggtttggt 18597215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 458 - 560
Target Start/End: Original strand, 29814784 - 29814887
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaat-ttttgttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||||||||||||||| |||||||||||||||||||||  |||||||||  |||    
T  29814784 gatagaacagtacaacacaaggcagaacaacacaggacaatttttttatggcattgagtaatgttttgttttatacgatttttgggggacaaaatgttat 29814883  T
Q  557 tttg 560  Q
    ||||    
T  29814884 tttg 29814887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 505 - 607
Target Start/End: Original strand, 29054323 - 29054427
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| ||||| ||||||| ||| ||||| ||||||||   ||| ||||  ||||||| ||||||||||||||||||| ||||||||||||||||  ||||    
T  29054323 atggtattgaataattttctgtattatatgatttttgggtgacgaaatgttattttg-tattttagacaacttgtacgtgagacaaaaagttgtgctgtg 29054421  T
Q  602 gtttgg 607  Q
    ||||||    
T  29054422 gtttgg 29054427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 505 - 597
Target Start/End: Original strand, 23636189 - 23636282
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||| ||||||| |||||||||| ||||| |  |||| |||| |||||||||  ||||| | ||||||||| ||||||||||| ||||    
T  23636189 atggcattgaataattttttgttttatacaattttggggggacgaaatgctattttggatttttaaataacttgtacgtgagacaaaaatttgt 23636282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 560
Target Start/End: Original strand, 28502427 - 28502482
Alignment:
Q  506 tggcattgagtaat-ttttgttttatacgatttttgaaggacaaaattctattttg 560  Q
    |||||||||||||| |||||||||||||||||||||  |||||||||  |||||||    
T  28502427 tggcattgagtaatgttttgttttatacgatttttgggggacaaaatgttattttg 28502482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 27824813 - 27824720
Alignment:
Q  505 atggcattgagtaatttttgtt-ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| ||||| ||||||||| | ||||| ||||||||  ||||||||  ||||||| ||||||| || |||| |||| || |||||||||||||    
T  27824813 atggtattgaataatttttgatcttatatgatttttgttggacaaaaagctatttttgtattttggataactcgtacgtgggacaaaaagttgt 27824720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 425 - 608
Target Start/End: Complemental strand, 15587 - 15405
Alignment:
Q  425 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt- 523  Q
    ||||||||||||||| |||||||| ||||| | || |||| ||||||||||||||||||| | |||| || |        ||| |||||||||||||||     
T  15587 gggtgtgtttggtttgtaaaacagtaagtactggacagaacagtacaacacaaggcagaacagcacaggataaattttttatgacattgagtaatttttt 15488  T
Q  524 gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||||||||||||||||| |    |||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  15487 gttttatacgatttttgagg----aaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgttgtggtttggt 15405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 527 - 597
Target Start/End: Complemental strand, 13686 - 13616
Alignment:
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  13686 ttatacgatttttgatggacaaaatactattttggtattctagacaacttgtacatgtgacaaaaagttgt 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 428 - 597
Target Start/End: Complemental strand, 19297 - 19127
Alignment:
Q  428 tgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gtt 526  Q
    |||||||||||| |||||||| ||||| | |  | || |||||||||||||| |||| | ||||||  |        ||||||||||||||||||| |||    
T  19297 tgtgtttggtttgtaaaacagtaagtactgggcataacagtacaacacaaggtagaacagcacatggcaaattttttatggcattgagtaattttttgtt 19198  T
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  19197 ttatacgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgt 19127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 459 - 608
Target Start/End: Original strand, 15092 - 15244
Alignment:
Q  459 atagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctatt 557  Q
    |||||| ||||||||| ||||||||| | |||||||||        ||||||||||||||||| |||||||||| ||||||||  ||||||||| |||||    
T  15092 atagaacagtacaacataaggcagaacaacacatgaaaaaaaatttatggcattgagtaatttgttgttttataagatttttgggggacaaaatactatt 15191  T
Q  558 ttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    || |||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  15192 ttagtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 15244  T

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Target: scaffold0169 (Bit Score: 69; Significance: 2e-30; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 508 - 608
Target Start/End: Complemental strand, 12663 - 12560
Alignment:
Q  508 gcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtt 604  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||    
T  12663 gcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtt 12564  T
Q  605 tggt 608  Q
    ||||    
T  12563 tggt 12560  T

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Target: scaffold0169; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 508 - 608
Target Start/End: Complemental strand, 18181 - 18078
Alignment:
Q  508 gcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtt 604  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||    
T  18181 gcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtt 18082  T
Q  605 tggt 608  Q
    ||||    
T  18081 tggt 18078  T

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Target: scaffold0014 (Bit Score: 68; Significance: 8e-30; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 101915 - 102021
Alignment:
Q  505 atggcattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||    
T  101915 atggcattgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtg 102014  T
Q  602 gtttggt 608  Q
    |||||||    
T  102015 gtttggt 102021  T

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Target: scaffold0004 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 373094 - 373001
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  373094 atggcattgagtaattttttgttttatacgatttttgagggacaaaatgatattttggtattttagacaacttgtacgtgggacaaaaagttgt 373001  T

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Target: scaffold0208 (Bit Score: 63; Significance: 8e-27; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 2515 - 2362
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||||||||||||||||||||||| | ||||||| |        ||| ||||||||||||||| |||||||| |||||||   ||||||||  ||||    
T  2515 gatagaatagtacaacacaaggcagaacagcacatgacaaattttttatgacattgagtaattttttgttttataggatttttatgggacaaaaaactat 2416  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  2415 tttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 2362  T

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Target: scaffold0098 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 509 - 597
Target Start/End: Original strand, 51409 - 51498
Alignment:
Q  509 cattgagtaatttt-tgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  51409 cattgagtaattttttgttttatacgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 51498  T

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Target: scaffold0054 (Bit Score: 57; Significance: 3e-23; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 505 - 608
Target Start/End: Original strand, 23543 - 23647
Alignment:
Q  505 atggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||  ||  |||||||||||||||||||||||||| || |||||||||||||  ||||    
T  23543 atggcattgagtaattttttgttttatacgatttttgagggacaatgtt--attttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtg 23640  T
Q  602 gtttggt 608  Q
    |||||||    
T  23641 gtttggt 23647  T

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Target: scaffold0054; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 527 - 597
Target Start/End: Original strand, 19896 - 19966
Alignment:
Q  527 ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    |||| |||||||||| | ||||||  |||||||||||||| | ||||||||||| ||| ||||||||||||    
T  19896 ttatgcgatttttgatgaacaaaagactattttggtatttcaaacaacttgtacgtgaaacaaaaagttgt 19966  T

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Target: scaffold0957 (Bit Score: 55; Significance: 5e-22; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 519 - 589
Target Start/End: Complemental strand, 2610 - 2540
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaa 589  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  2610 tttttgttttatacgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgagacaa 2540  T

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Target: scaffold0729 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 458 - 608
Target Start/End: Complemental strand, 4756 - 4603
Alignment:
Q  458 gatagaatagtacaacacaaggcagaatatcacatgaaannnnnnnnatggcattgagtaattttt-gttttatacgatttttgaaggacaaaattctat 556  Q
    ||||||| ||||||||||||||||||| | |||| || |        ||||||||||||||||||| |||||||||||||||| |  ||||||||  |||    
T  4756 gatagaacagtacaacacaaggcagaacagcacaggacaaattttttatggcattgagtaattttttgttttatacgattttttagagacaaaatgatat 4657  T
Q  557 tttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    |||| | ||||||||||||| ||| || ||||||||||  ||||||||||||||    
T  4656 tttgatgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttggt 4603  T

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Target: scaffold0650 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 1758 - 1667
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 608  Q
    ||||||||||||| || |||||| |||| |||| |||||||||| ||||||||||||||||| || ||||||||||  ||||||||||||||    
T  1758 tttttgttttatatgacttttgagggacgaaatgctattttggttttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 1667  T

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Target: scaffold0155 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 510 - 597
Target Start/End: Complemental strand, 33669 - 33581
Alignment:
Q  510 attgagtaatttttgtt-ttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 597  Q
    ||||| ||||||||| | |||||| | |||||| ||||||||  |||||||||||||||| |||| |||||| || |||||||||||||    
T  33669 attgaataatttttggtcttatacaagttttgatggacaaaagcctattttggtattttatacaatttgtacgtgggacaaaaagttgt 33581  T

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Target: scaffold0280 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 505 - 608
Target Start/End: Complemental strand, 13817 - 13711
Alignment:
Q  505 atggcattgagtaattt-ttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtg 601  Q
    |||| ||||| |||||| |||||||||| | ||||||  ||||  ||| |||||||||| ||||||||||||||||  || |||||||||||||  ||||    
T  13817 atggtattgaataatttcttgttttatatgctttttgggggacggaatgctattttggtgttttagacaacttgtaagtgggacaaaaagttgtactgtg 13718  T
Q  602 gtttggt 608  Q
    |||||||    
T  13717 gtttggt 13711  T

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Target: scaffold0077 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 547 - 592
Target Start/End: Complemental strand, 7548 - 7503
Alignment:
Q  547 aaaattctattttggtattttagacaacttgtacatgagacaaaaa 592  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||    
T  7548 aaaaatctattttggtattttagacaactcgtacgtgagacaaaaa 7503  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 5555 - 5464
Alignment:
Q  519 tttttgttttatacgatttttgaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 608  Q
    ||||||||||||||||||||||  |  | ||||  |||||| ||||||||| |||||||||  || |||||||||||||  |||||||||||    
T  5555 tttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtatgtgggacaaaaagttgtgatgtggtttggt 5464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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