View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4887_high_12 (Length: 268)
Name: NF4887_high_12
Description: NF4887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4887_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 24518064 - 24518303
Alignment:
| Q |
18 |
agtactatagttccaaaccttaactttatatatgtagcaaagtgtttagtaaattaatatcacacagctcttggatataggttatggaccatcaatggct |
117 |
Q |
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| T |
24518064 |
agtactatagttccaaaccttaactttatacatgtagcaaagtgtttagtaaattaatatcacacagctcttggatataggttatggaccatcaatggct |
24518163 |
T |
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| Q |
118 |
ggcttaattacagtaaggaatagtacattgtacaatatagtaaagagaacaagtccaccagctagaagtgcaagaaaggactctgaaatttctagcttac |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
24518164 |
ggcttaattacagtaaggaatagtacattgtacaatatagtaaagagaacaagtccaccagctagaagtgcaagaaaggactctgaaatttccagcttac |
24518263 |
T |
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| Q |
218 |
cattgttttcacttatcacctcctctctcgtaggcttcat |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
24518264 |
cattgttttcacttatcacctcctctctcgtaggcttcat |
24518303 |
T |
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