View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4890_low_27 (Length: 244)

Name: NF4890_low_27
Description: NF4890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4890_low_27
NF4890_low_27
[»] chr2 (44 HSPs)
chr2 (43-239)||(792437-792633)
chr2 (43-239)||(21539636-21539832)
chr2 (43-239)||(29514100-29514296)
chr2 (43-239)||(43075629-43075825)
chr2 (43-239)||(5091621-5091819)
chr2 (43-239)||(29514556-29514751)
chr2 (76-239)||(33635248-33635411)
chr2 (43-239)||(38549724-38549920)
chr2 (40-239)||(35832288-35832487)
chr2 (83-239)||(4033756-4033912)
chr2 (80-239)||(14565454-14565614)
chr2 (42-239)||(28492398-28492595)
chr2 (76-239)||(8784307-8784470)
chr2 (80-227)||(28424190-28424337)
chr2 (76-239)||(10478087-10478253)
chr2 (43-239)||(4091889-4092086)
chr2 (88-239)||(44803823-44803973)
chr2 (43-190)||(15858740-15858887)
chr2 (43-239)||(43451395-43451580)
chr2 (94-212)||(22162249-22162368)
chr2 (83-237)||(18833993-18834149)
chr2 (43-237)||(15068625-15068808)
chr2 (112-237)||(9294603-9294728)
chr2 (131-236)||(13822854-13822959)
chr2 (43-219)||(26998200-26998376)
chr2 (93-219)||(20380055-20380182)
chr2 (76-171)||(10979104-10979198)
chr2 (83-219)||(32273593-32273730)
chr2 (77-219)||(38070912-38071054)
chr2 (192-239)||(10979197-10979244)
chr2 (137-187)||(38071571-38071621)
chr2 (130-219)||(44442101-44442190)
chr2 (130-219)||(9709485-9709572)
chr2 (130-219)||(32010073-32010161)
chr2 (147-208)||(12872107-12872168)
chr2 (130-194)||(33933045-33933109)
chr2 (130-212)||(4891747-4891828)
chr2 (83-121)||(5280700-5280738)
chr2 (83-121)||(40808932-40808970)
chr2 (130-199)||(8032790-8032858)
chr2 (202-239)||(38071531-38071568)
chr2 (166-218)||(11031025-11031077)
chr2 (77-113)||(19263996-19264032)
chr2 (77-113)||(33198862-33198898)
[»] chr1 (56 HSPs)
chr1 (43-239)||(44875058-44875254)
chr1 (43-239)||(15285683-15285878)
chr1 (43-239)||(18852102-18852298)
chr1 (43-239)||(25990628-25990823)
chr1 (43-239)||(40219936-40220131)
chr1 (43-239)||(46949200-46949396)
chr1 (43-239)||(43656122-43656317)
chr1 (42-237)||(29488626-29488821)
chr1 (42-239)||(9127921-9128118)
chr1 (43-239)||(28017537-28017733)
chr1 (43-239)||(38942526-38942722)
chr1 (76-239)||(23873912-23874075)
chr1 (43-239)||(40935698-40935894)
chr1 (43-229)||(26907184-26907370)
chr1 (42-239)||(18036423-18036619)
chr1 (42-239)||(26479617-26479814)
chr1 (43-239)||(40960559-40960755)
chr1 (76-239)||(28916600-28916763)
chr1 (43-239)||(31970394-31970589)
chr1 (76-239)||(35941753-35941916)
chr1 (43-239)||(49924298-49924494)
chr1 (94-239)||(47996884-47997029)
chr1 (43-239)||(6848391-6848585)
chr1 (49-239)||(45357961-45358151)
chr1 (86-239)||(4529109-4529262)
chr1 (86-239)||(39026331-39026484)
chr1 (80-239)||(35189116-35189276)
chr1 (43-239)||(18913430-18913625)
chr1 (86-237)||(36383850-36384001)
chr1 (96-239)||(15311110-15311252)
chr1 (43-239)||(35884101-35884286)
chr1 (83-237)||(44056385-44056540)
chr1 (132-219)||(25185406-25185492)
chr1 (130-213)||(15912169-15912251)
chr1 (128-219)||(44510321-44510411)
chr1 (77-213)||(16661431-16661569)
chr1 (135-219)||(7397682-7397765)
chr1 (77-239)||(41063657-41063820)
chr1 (166-219)||(13351686-13351739)
chr1 (43-113)||(44149060-44149130)
chr1 (130-218)||(5858474-5858561)
chr1 (77-121)||(15959860-15959904)
chr1 (78-187)||(51339032-51339142)
chr1 (78-194)||(35366330-35366447)
chr1 (147-218)||(42724082-42724152)
chr1 (83-113)||(43667497-43667527)
chr1 (149-218)||(13291778-13291847)
chr1 (166-219)||(45840167-45840220)
chr1 (130-187)||(51840630-51840686)
chr1 (77-113)||(298895-298931)
chr1 (77-121)||(4672796-4672840)
chr1 (77-113)||(6786734-6786770)
chr1 (77-113)||(7468181-7468217)
chr1 (77-113)||(28016972-28017008)
chr1 (147-203)||(37192870-37192926)
chr1 (167-219)||(37735485-37735537)
[»] chr8 (55 HSPs)
chr8 (43-239)||(35259939-35260135)
chr8 (43-239)||(37597952-37598148)
chr8 (42-239)||(24612563-24612760)
chr8 (43-239)||(27621012-27621208)
chr8 (43-239)||(3099834-3100031)
chr8 (43-239)||(11043939-11044135)
chr8 (42-239)||(44411292-44411490)
chr8 (43-239)||(35344248-35344445)
chr8 (76-239)||(44052535-44052699)
chr8 (42-239)||(32678592-32678789)
chr8 (43-239)||(27752468-27752664)
chr8 (43-239)||(36537940-36538136)
chr8 (43-239)||(11992609-11992806)
chr8 (42-239)||(33851106-33851303)
chr8 (43-239)||(25321669-25321865)
chr8 (76-239)||(35346387-35346550)
chr8 (97-239)||(44358574-44358716)
chr8 (76-239)||(39187149-39187311)
chr8 (132-239)||(31133112-31133219)
chr8 (105-239)||(37567514-37567648)
chr8 (76-232)||(12108084-12108240)
chr8 (144-239)||(34713511-34713606)
chr8 (76-230)||(2238685-2238828)
chr8 (76-230)||(24510787-24510930)
chr8 (147-230)||(41426325-41426408)
chr8 (127-193)||(40487794-40487859)
chr8 (83-219)||(8673302-8673438)
chr8 (76-206)||(16635490-16635620)
chr8 (130-219)||(25195149-25195237)
chr8 (130-219)||(41791563-41791651)
chr8 (147-235)||(16643369-16643457)
chr8 (76-206)||(16635354-16635488)
chr8 (132-219)||(17336713-17336799)
chr8 (130-216)||(34899894-34899979)
chr8 (77-219)||(17314744-17314887)
chr8 (47-141)||(31133765-31133859)
chr8 (130-219)||(41362410-41362498)
chr8 (76-206)||(16635622-16635756)
chr8 (77-191)||(17713137-17713252)
chr8 (134-218)||(27819632-27819715)
chr8 (108-190)||(16635786-16635871)
chr8 (127-196)||(16643214-16643284)
chr8 (77-113)||(13144190-13144226)
chr8 (130-194)||(28497641-28497704)
chr8 (155-213)||(14693376-14693434)
chr8 (83-121)||(30576048-30576086)
chr8 (166-219)||(4038984-4039037)
chr8 (166-219)||(29147340-29147393)
chr8 (165-218)||(36190775-36190828)
chr8 (186-239)||(40486575-40486628)
chr8 (77-113)||(4047123-4047159)
chr8 (166-218)||(14576249-14576301)
chr8 (83-123)||(15958103-15958143)
chr8 (77-113)||(34890403-34890439)
chr8 (77-113)||(36190666-36190702)
[»] chr7 (49 HSPs)
chr7 (43-239)||(45598782-45598978)
chr7 (43-239)||(43107945-43108142)
chr7 (43-239)||(35181070-35181266)
chr7 (43-239)||(41889049-41889245)
chr7 (43-239)||(34808097-34808293)
chr7 (42-239)||(23106329-23106527)
chr7 (42-239)||(44600323-44600520)
chr7 (43-239)||(21654161-21654357)
chr7 (43-239)||(41815733-41815929)
chr7 (49-239)||(47383290-47383480)
chr7 (43-239)||(40560260-40560456)
chr7 (76-239)||(48879299-48879462)
chr7 (43-239)||(3157314-3157510)
chr7 (88-239)||(40583068-40583219)
chr7 (76-239)||(36576329-36576492)
chr7 (43-239)||(42617549-42617745)
chr7 (42-239)||(19933095-19933292)
chr7 (42-239)||(19964234-19964431)
chr7 (95-239)||(22111370-22111514)
chr7 (88-239)||(23731483-23731634)
chr7 (45-239)||(32491147-32491340)
chr7 (78-239)||(48937929-48938088)
chr7 (78-239)||(48942955-48943114)
chr7 (43-239)||(41890282-41890496)
chr7 (43-239)||(18206359-18206544)
chr7 (76-239)||(9818392-9818542)
chr7 (76-239)||(10720317-10720467)
chr7 (76-237)||(30082275-30082425)
chr7 (84-219)||(39348708-39348843)
chr7 (83-219)||(39337445-39337584)
chr7 (155-239)||(7989348-7989432)
chr7 (139-237)||(33153013-33153111)
chr7 (127-237)||(35084143-35084253)
chr7 (131-237)||(28608338-28608445)
chr7 (131-230)||(29236117-29236215)
chr7 (130-219)||(31769063-31769151)
chr7 (130-219)||(35888070-35888158)
chr7 (76-144)||(7989425-7989493)
chr7 (131-219)||(18800834-18800922)
chr7 (152-219)||(48339322-48339389)
chr7 (43-121)||(47778635-47778713)
chr7 (77-239)||(38260231-38260395)
chr7 (83-200)||(37767139-37767252)
chr7 (130-189)||(22369197-22369255)
chr7 (142-237)||(28843558-28843653)
chr7 (151-194)||(28941277-28941320)
chr7 (137-199)||(6882378-6882439)
chr7 (76-113)||(18800929-18800966)
chr7 (165-218)||(25944581-25944634)
[»] chr4 (49 HSPs)
chr4 (43-239)||(39970037-39970233)
chr4 (43-239)||(29180460-29180656)
chr4 (43-239)||(30776532-30776728)
chr4 (43-239)||(30777363-30777559)
chr4 (43-239)||(52712939-52713135)
chr4 (76-239)||(53677527-53677690)
chr4 (43-239)||(3043215-3043411)
chr4 (43-239)||(10591551-10591746)
chr4 (76-239)||(49901935-49902099)
chr4 (43-239)||(32012375-32012571)
chr4 (42-239)||(55937751-55937948)
chr4 (43-239)||(9798123-9798319)
chr4 (43-239)||(37788327-37788523)
chr4 (76-239)||(43980407-43980570)
chr4 (76-239)||(50768354-50768517)
chr4 (43-239)||(38940745-38940941)
chr4 (76-239)||(1619938-1620101)
chr4 (43-239)||(29899591-29899787)
chr4 (42-239)||(38187774-38187971)
chr4 (94-236)||(51495079-51495218)
chr4 (129-239)||(47807157-47807267)
chr4 (42-226)||(27750409-27750593)
chr4 (83-237)||(30012004-30012157)
chr4 (76-210)||(5222370-5222509)
chr4 (43-219)||(23978210-23978387)
chr4 (127-230)||(5234059-5234162)
chr4 (77-219)||(37911798-37911941)
chr4 (130-232)||(40553738-40553839)
chr4 (83-218)||(47516287-47516423)
chr4 (149-218)||(17799230-17799299)
chr4 (77-213)||(8013190-8013327)
chr4 (78-121)||(47806809-47806852)
chr4 (130-200)||(38140826-38140896)
chr4 (83-193)||(46070641-46070753)
chr4 (94-196)||(17236342-17236446)
chr4 (130-219)||(28142717-28142804)
chr4 (155-220)||(32410321-32410386)
chr4 (77-194)||(53848381-53848499)
chr4 (130-193)||(28318538-28318600)
chr4 (155-216)||(7652121-7652182)
chr4 (152-219)||(5064750-5064817)
chr4 (78-218)||(8178335-8178475)
chr4 (130-213)||(40411070-40411152)
chr4 (43-113)||(17187003-17187073)
chr4 (83-112)||(26916257-26916286)
chr4 (166-211)||(49080261-49080306)
chr4 (77-113)||(16605056-16605092)
chr4 (77-113)||(35310964-35311000)
chr4 (77-113)||(55580562-55580598)
[»] chr5 (35 HSPs)
chr5 (43-239)||(30086630-30086826)
chr5 (43-239)||(8146095-8146291)
chr5 (40-239)||(42364917-42365112)
chr5 (43-239)||(31690702-31690898)
chr5 (43-239)||(13146610-13146806)
chr5 (43-239)||(37066305-37066501)
chr5 (42-239)||(20914739-20914936)
chr5 (43-239)||(8541646-8541841)
chr5 (43-239)||(35462800-35462996)
chr5 (42-239)||(16286165-16286362)
chr5 (43-239)||(12638771-12638966)
chr5 (84-239)||(24432482-24432637)
chr5 (43-239)||(25962530-25962730)
chr5 (94-239)||(31316883-31317028)
chr5 (93-239)||(17825280-17825425)
chr5 (78-237)||(24439488-24439647)
chr5 (86-237)||(8143858-8144009)
chr5 (131-237)||(2002217-2002323)
chr5 (76-200)||(20452543-20452668)
chr5 (77-213)||(28906984-28907122)
chr5 (77-213)||(28943379-28943517)
chr5 (130-219)||(3463917-3464006)
chr5 (77-194)||(8506353-8506471)
chr5 (98-219)||(8959577-8959699)
chr5 (77-121)||(32433570-32433614)
chr5 (130-219)||(16153447-16153535)
chr5 (137-194)||(1144624-1144680)
chr5 (130-194)||(10154055-10154118)
chr5 (130-200)||(35275346-35275415)
chr5 (165-218)||(42273654-42273705)
chr5 (167-220)||(445990-446043)
chr5 (133-218)||(8146696-8146781)
chr5 (165-202)||(15006413-15006450)
chr5 (77-113)||(9957644-9957680)
chr5 (77-113)||(42273546-42273582)
[»] chr3 (63 HSPs)
chr3 (48-239)||(31126097-31126288)
chr3 (43-239)||(1334990-1335186)
chr3 (42-239)||(21654123-21654321)
chr3 (43-239)||(23513447-23513643)
chr3 (43-239)||(26641156-26641352)
chr3 (43-239)||(55400618-55400814)
chr3 (43-239)||(37324128-37324328)
chr3 (43-239)||(46580414-46580612)
chr3 (76-239)||(53020095-53020259)
chr3 (76-239)||(51426530-51426695)
chr3 (80-229)||(13541194-13541343)
chr3 (43-239)||(45781276-45781473)
chr3 (86-239)||(28793084-28793238)
chr3 (94-239)||(46296121-46296266)
chr3 (83-239)||(51255108-51255262)
chr3 (83-239)||(16739204-16739355)
chr3 (42-239)||(32322283-32322480)
chr3 (42-239)||(43575837-43576033)
chr3 (90-236)||(52172057-52172204)
chr3 (130-239)||(49068018-49068127)
chr3 (44-217)||(46819930-46820103)
chr3 (43-237)||(36189052-36189246)
chr3 (131-239)||(52252004-52252112)
chr3 (43-164)||(34022501-34022622)
chr3 (43-219)||(21214121-21214298)
chr3 (77-219)||(22456069-22456212)
chr3 (78-219)||(22479115-22479257)
chr3 (181-239)||(45347757-45347815)
chr3 (77-213)||(23209347-23209484)
chr3 (147-237)||(51309397-51309487)
chr3 (130-219)||(2994479-2994567)
chr3 (78-219)||(10251926-10252068)
chr3 (189-239)||(34022625-34022675)
chr3 (43-121)||(49066993-49067071)
chr3 (127-219)||(47444034-47444125)
chr3 (88-213)||(49583890-49584016)
chr3 (77-220)||(38401294-38401438)
chr3 (43-121)||(45347830-45347908)
chr3 (78-219)||(10114827-10114968)
chr3 (130-218)||(30454786-30454873)
chr3 (153-237)||(46303534-46303618)
chr3 (130-210)||(48291791-48291870)
chr3 (130-237)||(7886660-7886766)
chr3 (131-237)||(34105500-34105611)
chr3 (83-218)||(34194808-34194944)
chr3 (78-218)||(54725665-54725806)
chr3 (130-219)||(10014238-10014326)
chr3 (166-219)||(25242239-25242292)
chr3 (130-213)||(29676514-29676596)
chr3 (133-239)||(8097059-8097164)
chr3 (42-113)||(33974746-33974817)
chr3 (165-218)||(50651099-50651152)
chr3 (130-193)||(7615008-7615070)
chr3 (165-219)||(20847329-20847383)
chr3 (165-218)||(35963161-35963214)
chr3 (165-218)||(50730118-50730171)
chr3 (165-218)||(50782683-50782736)
chr3 (77-113)||(2927189-2927225)
chr3 (167-199)||(3972286-3972318)
chr3 (167-199)||(3997560-3997592)
chr3 (77-113)||(14752395-14752431)
chr3 (83-123)||(36546480-36546520)
chr3 (83-123)||(36561795-36561835)
[»] chr6 (19 HSPs)
chr6 (43-239)||(10227791-10227987)
chr6 (44-239)||(12278586-12278781)
chr6 (79-239)||(17721891-17722051)
chr6 (43-239)||(30766325-30766521)
chr6 (43-239)||(373978-374174)
chr6 (43-239)||(30949014-30949210)
chr6 (42-239)||(17598171-17598368)
chr6 (76-239)||(33756168-33756331)
chr6 (43-239)||(31887203-31887400)
chr6 (98-219)||(3888362-3888484)
chr6 (78-208)||(32882806-32882925)
chr6 (43-219)||(4031867-4032044)
chr6 (130-219)||(16524349-16524436)
chr6 (130-218)||(5300696-5300783)
chr6 (132-219)||(4987914-4988000)
chr6 (147-216)||(21963941-21964009)
chr6 (138-212)||(16655172-16655245)
chr6 (77-179)||(5822162-5822266)
chr6 (1-44)||(3673493-3673536)
[»] scaffold0495 (1 HSPs)
scaffold0495 (43-239)||(4510-4705)
[»] scaffold0330 (1 HSPs)
scaffold0330 (130-219)||(3139-3227)


Alignment Details
Target: chr2 (Bit Score: 156; Significance: 5e-83; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 792633 - 792437
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  792633 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttc 792534  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  792533 aaagaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 792437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 21539636 - 21539832
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  21539636 tactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttc 21539735  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21539736 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattat 21539832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 29514296 - 29514100
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||| |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  29514296 tactccatccgtcttaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttc 29514197  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  29514196 aaacaaatcatcttttttaatgtaaaattaaatgcaaattgcattcaatttgttctcatttttattttctctataatttttaaccaatgaaaattat 29514100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 43075629 - 43075825
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||||||||||||||||       ||||||||| ||||| ||||||||||||||||||| ||||| |||| ||  ||||||||||||||||    
T  43075629 tactccctccgtcttaaaatataagcaaaaaaatctcatattttttgtgtcaaaatataagcaaaaaataccaacttttatgctattattatgttttttc 43075728  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  43075729 aaacaaatcatctattccaatgtaaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaaccaatgaaaattat 43075825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 5091819 - 5091621
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt- 141  Q
    |||||| ||||||||||||||||||        | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||     
T  5091819 tactccttccgtcttaaaatataagtaaaaaaatttcatattctttatctcaaaatataagtaaaaaagaccaacttttatgccattattatgttttttt 5091720  T
Q  142 -caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
     ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5091719 tcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 5091621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 29514751 - 29514556
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||| ||||||| ||||||||||||       |||||||||||||||||||||||||||| |||||||||||| |||| ||  ||||||||||||||||    
T  29514751 tactcgctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataag-aaaaaagaccaacttttatgctattattatgttttttc 29514653  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  29514652 aaacaaatcatctttcccaatgtaaaattaaatgtaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgaaaattat 29514556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 33635248 - 33635411
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| ||  ||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  33635248 tctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttctaatgtaaaattaaat 33635347  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33635348 gcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattat 33635411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 38549920 - 38549724
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| |||||||||||        |||||| |||||||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||    
T  38549920 tactccctccgtcctaaaatataagtaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttc 38549821  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  38549820 aaataaatcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattat 38549724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 35832288 - 35832487
Alignment:
Q  40 tggtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttt 139  Q
    |||||||||||||||  ||||||||||||       | | ||||||||||||||||||||||||||||||||||  |||||| ||  |||||||||||||    
T  35832288 tggtactccctccgttctaaaatataagcaaaaaaattttatattctttgtctcaaaatataagcaaaaaagacatatttttatgctattattatgtttt 35832387  T
Q  140 ttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  35832388 ttcaaacaaatcatcttttccaatataaaattaaatgcaaattgcattcaatctgttcacctttttattttctccataatttttaactaatgagaattat 35832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 4033912 - 4033756
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaatt 182  Q
    |||||||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  4033912 ttctttgtctcaaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaaacatctttttcaatgtaaaattaaatgcaaatt 4033813  T
Q  183 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  4033812 gcattcaatttattctcctttttattttctccataatttttaaccaacgagaattat 4033756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 80 - 239
Target Start/End: Complemental strand, 14565614 - 14565454
Alignment:
Q  80 atattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt-caaacaaatcatcttttccaatgtaaaattaaatgca 178  Q
    |||||||||||||||||||||||||||||||||| || |||| ||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  14565614 atattctttgtctcaaaatataagcaaaaaagactaacttttatgctattattatgtttttttcaaagaaatcatcttttccaatgtaaaattaaatgca 14565515  T
Q  179 aattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14565514 aattgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattat 14565454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 28492398 - 28492595
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||| ||||||||||||       ||| || |||||||||| ||||||||||||||||||||||| |||| ||  |||||||| ||||||    
T  28492398 gtactccctccgtcctaaaatataagcaaaaaaatcttattttctttgtcttaaaatataagcaaaaaagaccaacttttatgctattattatatttttt 28492497  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||    
T  28492498 caaacaaatcattttttccaatgtaaaattaaatgcaaattgcattcaacttattctcctttttattttctctataatttttaaccaatgagaattat 28492595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 8784307 - 8784470
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| ||  ||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  8784307 tctcatattctttgtctcaaaatataagtaaaaaagaccaacttttatgctattattatgttatttcaaacaaatcatctttttcaatgtaaaattaaat 8784406  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  8784407 gcaaattgcattcaatgtgttctcctttttattttctccataatttttaatcaataagaattat 8784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 80 - 227
Target Start/End: Original strand, 28424190 - 28424337
Alignment:
Q  80 atattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 179  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28424190 atattctttgtctcaaaatttaagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 28424289  T
Q  180 attgcattcaatttgttctcctttttattttctccataatttttaacc 227  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  28424290 attgtattcaatttgttctcctttttattttctccataatttttaacc 28424337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 10478087 - 10478253
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaaga--ccaatttttgtgtcattattatgtttt-ttcaaacaaatcatcttttccaatgtaaaatta 172  Q
    |||||| || ||||||||||||||||||||||||| |  ||||||||| ||  ||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  10478087 tctcattttttttgtctcaaaatataagcaaaaaaaaaaccaatttttatgctatttttatgtttttttcaaacaaatgatcttttccaatgtaaaatta 10478186  T
Q  173 aatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10478187 aatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattat 10478253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 4091889 - 4092086
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt- 141  Q
    ||||||||||||| |||||||||||        |||||| |||||||||||||||||||||||| ||| ||||| |||| ||  |||||||| ||||||     
T  4091889 tactccctccgtcctaaaatataagtaataaaatctcattttctttgtctcaaaatataagcaagaaaaaccaacttttatgctattattatattttttt 4091988  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  4091989 caaataaatcatctttttcaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttttccataatttttaaccattgagaattat 4092086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 44803823 - 44803973
Alignment:
Q  88 tgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcatt 187  Q
    |||||||||||||||| ||||||||  || |||| ||| |||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  44803823 tgtctcaaaatataagtaaaaaagataaacttttatgttattattatatttttt-aaataaatcatcttttccaatgtaaaattaaatacaaattgcatt 44803921  T
Q  188 caatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44803922 caatttgttctcctatttattttctccataatttttaaccaatgagaattat 44803973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 43 - 190
Target Start/End: Complemental strand, 15858887 - 15858740
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       | |||||||||||||||||||||||||| |||||||||||| |||| ||  ||||||||||||||||    
T  15858887 tactccctccgtcctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagtaaaaaagaccaaattttatgctattattatgttttttc 15858788  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaa 190  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15858787 aaataaatcatcttttccaatgtaaaattaaatgcaaattgcattcaa 15858740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 43451395 - 43451580
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||||||| ||||||||||||| |       |||||| |||||||| |||||||||||| |||||||| ||||||||           ||||| ||||    
T  43451395 tactccctccatcttaaaatataaacaaaaaaatctcattttctttgtatcaaaatataagtaaaaaagatcaattttt-----------atgttatttc 43451483  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  43451484 aaacaaatcatctttttcaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgaaaattat 43451580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 22162249 - 22162368
Alignment:
Q  94 aaaatataagcaaaaaagacc-aatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatt 192  Q
    ||||||||||||||||||||  || |||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  22162249 aaaatataagcaaaaaagacttaacttttatgctattattatgttttttcaaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatg 22162348  T
Q  193 tgttctcctttttattttct 212  Q
    ||||||||||||||||||||    
T  22162349 tgttctcctttttattttct 22162368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 18834149 - 18833993
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc---aaacaaatcatcttttccaatgtaaaattaaatgcaa 179  Q
    ||||||||| |||||||||||||||||||| ||| |||| |   |||||||||||||||    ||| ||||||||||| | || ||||||||||||||||    
T  18834149 ttctttgtcccaaaatataagcaaaaaagatcaacttttattctattattatgttttttttaaaaaaaaatcatcttt-ctaaagtaaaattaaatgcaa 18834051  T
Q  180 attgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  18834050 attgcattcaatttgttctcctttttattttctccataataattaaccaatgataatt 18833993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 15068625 - 15068808
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||||||||||||||| |||||||         |||| |||||||||||||||||||||||||||||| ||||||||           || || ||||    
T  15068625 tactccctccgtcttaaattataagcaaaaaaaattcattttctttgtctcaaaatataagcaaaaaagatcaattttt-----------atattatttc 15068713  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    ||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||  ||||||||| ||||||    
T  15068714 aagaaaatcatcttttccaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaatt 15068808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 9294603 - 9294728
Alignment:
Q  112 accaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttc 211  Q
    |||||||||| |||  |||||||||| ||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||||| || | |||| ||    
T  9294603 accaatttttatgttcttattatgttatttcataaaaatcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttcttctctctattctc 9294702  T
Q  212 tccataatttttaaccaatgagaatt 237  Q
    ||||||||  ||||||||| ||||||    
T  9294703 tccataatcattaaccaataagaatt 9294728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 13822959 - 13822854
Alignment:
Q  131 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 230  Q
    ||||||| ||| ||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||||    
T  13822959 ttatgttattttaaaaaaataatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcatttctattctctccataatcattaaccaat 13822860  T
Q  231 gagaat 236  Q
     |||||    
T  13822859 aagaat 13822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 219
Target Start/End: Original strand, 26998200 - 26998376
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttt 140  Q
    |||||||||||||||||| |||||||       | |||| |||||||||  ||| ||||||||||||||||||| |||| |   |||  ||||| |||||    
T  26998200 tactccctccgtcttaaattataagcaaaaaaat-tcattttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatattttt 26998298  T
Q  141 tcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||| |||| ||||||||||| | ||||||||||||||| ||||||||||||| |||| |||| |||||||| |||||    
T  26998299 tcaaa-aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataat 26998376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 20380055 - 20380182
Alignment:
Q  93 caaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaa 190  Q
    |||| ||||||||||||||||||| |||| | | |||  |||||||||||||||| | || ||||||||||| | ||||||||||||||| |||||||||    
T  20380055 caaattataagcaaaaaagaccaacttttatcttatttaattatgttttttcaaa-atattatcttttccaaaggaaaattaaatgcaaagtgcattcaa 20380153  T
Q  191 tttgttctcctttttattttctccataat 219  Q
    |||| |||| |||| |||||||| |||||    
T  20380154 tttgctctcgttttcattttctctataat 20380182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 171
Target Start/End: Original strand, 10979104 - 10979198
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaatt 171  Q
    |||||| || |||||||||||||||| |||||||||||||| |||| ||  ||| |||||||||||||||||||||||||||||||| ||| ||||    
T  10979104 tctcattttttttgtctcaaaatata-gcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttccaaagtagaatt 10979198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 32273593 - 32273730
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 180  Q
    |||||||||  ||| ||||||||||||||||||| |||| |   |||  |||||||||||||||| |||| || |||||||| | ||||||||||| |||    
T  32273593 ttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatattttccaaaggaaaattaaatgtaaa 32273691  T
Q  181 ttgcattcaatttgttctcctttttattttctccataat 219  Q
     ||||||||||||| |||| |||| |||||||| |||||    
T  32273692 gtgcattcaatttgctctctttttcattttctctataat 32273730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 219
Target Start/End: Original strand, 38070912 - 38071054
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| ||||||||| |||| |||||||||||||||| || |||| |   |||  |||||||||||||||| |||| ||||||||||| | |||||||||    
T  38070912 ctcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaa 38071010  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    || ||| ||||||||||||| |||  |||| |||||||| |||||    
T  38071011 tgtaaagtgcattcaatttgctct-attttcattttctctataat 38071054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 10979197 - 10979244
Alignment:
Q  192 ttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10979197 ttgttctcctttttattttctccataatttttaactaatgagaattat 10979244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 38071621 - 38071571
Alignment:
Q  137 tttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcatt 187  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||    
T  38071621 tttttcaaacaaatcatcttttccaatgtaaaattatatacaaattgcatt 38071571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 44442101 - 44442190
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||| ||| |||| |||||||| || | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||    
T  44442101 attatgttttttgaaaaaaattatcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataat 44442190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 9709485 - 9709572
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||| ||||||| |||| |||||| |||| | |||||||| |||||||||||||||||||||||||  ||| |||||||| |||||    
T  9709485 attatgttgtttcaaa-aaattatctttaccaaagaaaaattaa-tgcaaattgcattcaatttgttctctctttcattttctcaataat 9709572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 32010073 - 32010161
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||| |||||||||| |||| ||||||| ||| | ||||||||||||||| |||||| |||||| |||| |||| |||||||| |||||    
T  32010073 attatattttttcaaa-aaattatctttttcaaaggaaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataat 32010161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 12872107 - 12872168
Alignment:
Q  147 aaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttatt 208  Q
    |||||||||||| ||| |||||||||||| |||||| |||| ||||| ||||||||| ||||    
T  12872107 aaatcatctttttcaaagtaaaattaaatacaaatttcatttaatttattctcctttctatt 12872168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 33933109 - 33933045
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 194  Q
    |||| ||| ||||||| |||||||||||||||| | ||||||||||| || ||||||||| ||||    
T  33933109 attacgttatttcaaaaaaatcatcttttccaaagaaaaattaaatgtaagttgcattcattttg 33933045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 4891828 - 4891747
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttct 212  Q
    |||||||||||||||| |||| || |||| ||| | ||||||||||| ||| |||||||||| || |||| |||| |||||||    
T  4891828 attatgttttttcaaa-aaattatatttttcaaaggaaaattaaatgtaaagtgcattcaatctgctctctttttcattttct 4891747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 5280738 - 5280700
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaattttt 121  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  5280738 ttctttgtcccaaaatataagcaaaaaagacaaattttt 5280700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 40808970 - 40808932
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaattttt 121  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  40808970 ttctttgtcccaaaatataagcaaaaaagacaaattttt 40808932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 8032858 - 8032790
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctc 199  Q
    |||||||| ||| ||| |||| ||||||| ||| | ||||||||||||||| ||||||||||||| ||||    
T  8032858 attatgttgttttaaa-aaattatctttttcaaagaaaaattaaatgcaaaatgcattcaatttgctctc 8032790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 38071568 - 38071531
Alignment:
Q  202 ttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  38071568 tttttttttcttcataatttttaaccaatgagaattat 38071531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 11031077 - 11031025
Alignment:
Q  166 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    ||||||||||||||| ||||||||||||| ||||  ||| |||||||| ||||    
T  11031077 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataa 11031025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 19263996 - 19264032
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  19263996 ctcattttctttgtcccaaaatataagcaaaaaagac 19264032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 33198898 - 33198862
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  33198898 ctcattttctttgtcccaaaatataagcaaaaaagac 33198862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 44875058 - 44875254
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  44875058 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttc 44875157  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44875158 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 44875254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 15285683 - 15285878
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  15285683 tactccctccgtcttaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgccattattatgttttttc 15285782  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  15285783 aaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttct-cttttttttttctccataatttttaaccaatgagaattat 15285878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 18852102 - 18852298
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||| | |||| ||||||||||||||||||||    
T  18852102 tactccctccgtcttaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcataaaagacctacttttatgtcattattatgttttttc 18852201  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18852202 aaacaaattattttttccaatgtaaaattaaatgcaaattgcattcaatttgttcccctttttattttctccataatttttaaccaatgagaattat 18852298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 25990628 - 25990823
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  25990628 tactccctccgtcctaaaatataagcaaaaaaa-ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattatgttttttc 25990726  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25990727 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattat 25990823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 40219936 - 40220131
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  40219936 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttc 40220035  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40220036 aaacaaat-atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 40220131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 46949200 - 46949396
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  46949200 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttc 46949299  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46949300 aaacaaatcatctttttcaatgtaaaattaaatgcaaattgtattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattat 46949396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 43656317 - 43656122
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||||||||| |||||| | ||| |||| ||||||||||||||||||||    
T  43656317 tactccctccgtcttaaaatataagcaaaaaaatctcatattctttgtctcaaaatataaggaaaaaa-atcaacttttatgtcattattatgttttttc 43656219  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  43656218 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttcttcataatttttaaccaatgaaaattat 43656122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 42 - 237
Target Start/End: Original strand, 29488626 - 29488821
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||    
T  29488626 gtactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt 29488725  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29488726 caaacaaataatattttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 29488821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 9127921 - 9128118
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||| ||||||    
T  9127921 gtactccctccgtcttaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatatttttt 9128020  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  9128021 caaacaaatcatctttttcaatgtaaaattaaatgtaaattgcattcaatttatttacctttttattttctccataatttttaaccaatgagaattat 9128118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 28017537 - 28017733
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||||||||||||||         ||||||||||||| ||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||    
T  28017537 tactccctccgtcttaaaatataaataaaaaattctcatattctttatctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttc 28017636  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  28017637 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgataattat 28017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 38942722 - 38942526
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||    
T  38942722 tactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttc 38942623  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38942622 aaacaaatcattttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattat 38942526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 23874075 - 23873912
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23874075 tctcatattctttgtctcaaaatatacgcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 23873976  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  23873975 gcaaattgcatttaatttgttctcttttttattttctccataatttttaaccaatgaaaattat 23873912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 40935894 - 40935698
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||| ||| |||| ||  ||| |||||||| |||    
T  40935894 tactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgtttcttc 40935795  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40935794 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattat 40935698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 43 - 229
Target Start/End: Complemental strand, 26907370 - 26907184
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||||||||||||||||       |||||| ||||||||||||||||||||| |||||||||||| |||| ||  ||||||||||||||||    
T  26907370 tactccctccgtcttaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgctattattatgttttttc 26907271  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 229  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26907270 aaacaaattatctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaa 26907184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 18036423 - 18036619
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||| |||||||||| |       |||||| ||||||||||||||||||||| |||||||||||| |||| ||  |||||||||||||||    
T  18036423 gtactccctccgtcctaaaatataaacaaaaatatctcattttctttgtctcaaaatataag-aaaaaagaccaacttttatgctattattatgtttttt 18036521  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  18036522 caaacaaatcatcttttccaaagtaaaattaaatgcaaattgcattcaatttattctcctttttattttcttcataatttttaaccaatgagaattat 18036619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 26479617 - 26479814
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    ||||| |||||||||||||||||||||       ||||||||||||||||||||||||||| ||||||| ||||| |||| || ||||||||| ||||||    
T  26479617 gtacttcctccgtcttaaaatataagcaaaaaaatctcatattctttgtctcaaaatataaacaaaaaaaaccaacttttatgccattattatatttttt 26479716  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  26479717 caaacaaatcatcttttccaatgtaaaattcaatgaaaattgcattcaatatgttctcctttttattttctctatagtttttaaccaatgagaattat 26479814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 40960755 - 40960559
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||| |||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||| ||| |||| ||  ||| ||||||||||||    
T  40960755 tacttcctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttc 40960656  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40960655 aaacaaatcatctttttcaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattat 40960559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 28916763 - 28916600
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    ||||||||| |||||||||||||||||| ||||||||| || |||| ||  ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28916763 tctcatattttttgtctcaaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatcttttccaatataaaattaaat 28916664  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  28916663 gcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattat 28916600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 31970589 - 31970394
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||| ||| ||||||||||||       |||||| |||||||| |||||||||||| |||||||| ||| |||| ||| ||| |||||| |||||    
T  31970589 tactccctctgtcctaaaatataagcaaaaaaatctcattttctttgtatcaaaatataag-aaaaaagatcaacttttatgttatttttatgtcttttc 31970491  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31970490 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattat 31970394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 35941753 - 35941916
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||| ||  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35941753 tctcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgctattattatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 35941852  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  35941853 acaaattgcattcaatttgttctcttttttattttctccataatttttaatcaatgaaaattat 35941916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 49924298 - 49924494
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||| ||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||| ||| |||| ||  ||| ||||||||||||    
T  49924298 tactctctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttc 49924397  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  49924398 aaacaaatcatcttttccaatgtaaaattaaatgcaagttacatttaatttgttctcctttttattttcttcatgatttttaaccaatgagaattat 49924494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 94 - 239
Target Start/End: Original strand, 47996884 - 47997029
Alignment:
Q  94 aaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 193  Q
    ||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  47996884 aaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatacaaattgtattcaattt 47996983  T
Q  194 gttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  47996984 gttctcctttttattttctccataatttttaactaatgagaattat 47997029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 6848585 - 6848391
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt- 141  Q
    ||||||||||||| ||||||||||||       | ||||||||||||||||||||||||||||||||||||   ||||| ||  |||||||||||||||     
T  6848585 tactccctccgtcctaaaatataagcaaaaaattatcatattctttgtctcaaaatataagcaaaaaagac---tttttatgctattattatgttttttt 6848489  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||    
T  6848488 ctaacaaatcatcttttccaatctaaaattaaatgcaaattgcattcaatgcgttatcctttttattttctccataatttttaaccaatgagaattat 6848391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 49 - 239
Target Start/End: Complemental strand, 45358151 - 45357961
Alignment:
Q  49 ctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaa 148  Q
    ||||||||||||||||||||       ||| || |||||||||||||||||||||||||||| ||||| |||| ||  ||| ||||||| ||||||||||    
T  45358151 ctccgtcttaaaatataagcaaaaaaatctaattttctttgtctcaaaatataagcaaaaaaaaccaacttttatgctatttttatgttatttcaaacaa 45358052  T
Q  149 atcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||| ||  ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45358051 atcatcttttccaatgtaaaattaaatacatgttgcatttaatttgttcacctttttattttctccataatttttaaccaatgagaattat 45357961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 4529109 - 4529262
Alignment:
Q  86 tttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgca 185  Q
    ||||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  4529109 tttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcattttttccaatgtaaaattaaatgcaaattgca 4529208  T
Q  186 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||| |||||| ||||||||||||||||||||  |||||||||||    
T  4529209 ttcaatttgttcttctttttgttttctccataatttttaacagatgagaattat 4529262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 39026484 - 39026331
Alignment:
Q  86 tttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgca 185  Q
    ||||||||||||||||||||||||||||||| |||| ||  ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||    
T  39026484 tttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaataaatcatattttccaatgtaaaattaaatgcaagttgca 39026385  T
Q  186 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    || ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  39026384 tttaatttattctcctttttattttctccataatttttaaccaataagaattat 39026331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 80 - 239
Target Start/End: Original strand, 35189116 - 35189276
Alignment:
Q  80 atattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttt-ttcaaacaaatcatcttttccaatgtaaaattaaatgca 178  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||  ||||||||||||| ||||||||||| ||||||| |||||||||||||| | ||    
T  35189116 atattctttgtctcaaaatataagcaaaaaagaccaacttttatggtattattatgtttttttcaaacaaataatctttttcaatgtaaaattaactaca 35189215  T
Q  179 aattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  35189216 aattgcattcaatgtgttctcctctttattttctccataatttttaaccaatgaaaattat 35189276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 18913625 - 18913430
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||||||||| |||||||||||||       |||||| ||||  |||||||||||||||||||||| |||||||||  ||  ||  ||||||||||||    
T  18913625 tactccctccgttttaaaatataagcaaaaaaatctcattttct--gtctcaaaatataagcaaaaaataccaattttgatgctatctttatgttttttc 18913528  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa-tgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| |||||||| ||||||||| || ||||||||||    
T  18913527 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttatgttctccatgatttttaactaattgagaattat 18913430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 36383850 - 36384001
Alignment:
Q  86 tttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc-aaacaaatcatcttttccaatgtaaaattaaatgcaaattgc 184  Q
    |||||| |||||||||||||||||||| ||| |||| ||| |||||||||||||||| ||| ||||||||||| |||| |||||||||||||||||||||    
T  36383850 tttgtcacaaaatataagcaaaaaagatcaacttttatgttattattatgttttttctaaaaaaatcatcttt-ccaaagtaaaattaaatgcaaattgc 36383948  T
Q  185 attcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    |||||||||||| ||||||||||||||||||||||  ||| ||||||| ||||    
T  36383949 attcaatttgttttcctttttattttctccataataattagccaatgataatt 36384001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 15311110 - 15311252
Alignment:
Q  96 aatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgt 195  Q
    ||||||| ||||||||| ||| |||| ||   |||||||||||||||||||||| |||||||| |||||||||||||||||||  ||| |||||||||||    
T  15311110 aatataaacaaaaaagatcaacttttatgctgttattatgttttttcaaacaaaacatctttttcaatgtaaaattaaatgcag-ttgtattcaatttgt 15311208  T
Q  196 tctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  15311209 tctcctttttattttctctataatttttaaccaatgagaattat 15311252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 35884101 - 35884286
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||||||| || ||||||||||||       ||||||||||||| ||| ||||||||||||||||||||||| |||| ||  |||||||| |||||||    
T  35884101 tactccctccttcctaaaatataagcaaaaaattctcatattctttatcttaaaatataagcaaaaaagaccaacttttatgctattattatattttttc 35884200  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||           ||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||| ||||||    
T  35884201 aaacaaatcat-----------taaaattaaatgcaaattgcattaaatgtgttcttctttttattttctctataatttttaaccaatgaaaattat 35884286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 44056540 - 44056385
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagac-caatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaat 181  Q
    ||||||||| |||||||||||||||||| |  |||||||  ||  |||| |||||||||||||| ||  |||||||| ||  |||||||||||||||| |    
T  44056540 ttctttgtcccaaaatataagcaaaaaaaaatcaattttcctgctattaatatgttttttcaaaaaacccatctttttcagagtaaaattaaatgcaatt 44056441  T
Q  182 tgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    ||||||| ||||  ||||||| ||||||||||||||||  ||||||||||||||||    
T  44056440 tgcattccattttctctccttcttattttctccataatcattaaccaatgagaatt 44056385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 25185492 - 25185406
Alignment:
Q  132 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||| |||| ||||||||||| | ||||||||||||||| |||||||||||||||||| |||| |||||||| |||||    
T  25185492 tatgttttttcaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataat 25185406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 15912169 - 15912251
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctc 213  Q
    |||||||| ||||||| ||||||| |||||||| | ||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  15912169 attatgttatttcaaa-aaatcattttttccaaagaaaaattaaatgcaaactgcattcaatttgctctccttttcattttctc 15912251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 44510411 - 44510321
Alignment:
Q  128 ttattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||| ||||||||||||| |||| | ||||||||| | ||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||    
T  44510411 ttatcatgttttttcaaa-aaattaccttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataat 44510321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 16661431 - 16661569
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| |||||| || |||| ||||||||||||||||||| | || |   |||  |||||||||| ||||| |||| ||||||| ||||  |||||||||    
T  16661431 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 16661529  T
Q  175 tgcaaattgcattcaatttgttctccttttt-attttctc 213  Q
    |||||| |||||||||||||||||| ||||| ||||||||    
T  16661530 tgcaaagtgcattcaatttgttctcttttttcattttctc 16661569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 7397682 - 7397765
Alignment:
Q  135 gttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||||||||| |||| ||||||||||| | ||||||||||||||| ||||||||||||| |||  |||| |||||||| |||||    
T  7397682 gttttttcaaa-aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataat 7397765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 41063657 - 41063820
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt----attatgttttttcaaacaaatcatcttttccaatgtaaaatta 172  Q
    ||||| || |||||| |||| |||||| |||||||||||| |||| |  ||||    ||||| || ||||||| |||| ||||||| ||| | |||||||    
T  41063657 ctcattttatttgtcccaaattataagaaaaaaagaccaacttttat--catttttaattatattgtttcaaa-aaattatctttttcaaagaaaaatta 41063753  T
Q  173 aatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||| ||||||||||||||||||  ||| |||||||| ||||    |||||||||| ||||||    
T  41063754 aatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattat 41063820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 13351686 - 13351739
Alignment:
Q  166 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||| |||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  13351686 aaaactaaatgcaaagtgcattcaatttgttctccttttcattttctctataat 13351739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 44149130 - 44149060
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||||||||||||| ||||||||||       |||||| ||||||||| |||||||||||||||||||||    
T  44149130 tactccctccgtcttgaaatataagcaaaaaaatctcattttctttgtcccaaaatataagcaaaaaagac 44149060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 5858561 - 5858474
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    |||||||| ||||||| |||| ||||||| ||| | ||||||||||||||| ||||||||||||| ||||  ||| |||||||| ||||    
T  5858561 attatgttgtttcaaa-aaattatctttttcaaaggaaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataa 5858474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 15959904 - 15959860
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaattttt 121  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||    
T  15959904 ctcattttctttgtcccaaaatataagcaaaaaagacaaattttt 15959860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 51339142 - 51339032
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||| ||||||||| |||| |||||| ||||||||| || |||| |   |||  ||||| |||||||||| |||||||||||||||| |  |||||||||    
T  51339142 tcattttctttgtcgcaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaa-aaatcatcttttccaaagagaaattaaat 51339044  T
Q  176 gcaaattgcatt 187  Q
    |||| |||||||    
T  51339043 gcaatttgcatt 51339032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 35366447 - 35366330
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||| |||||||||  ||| ||||||||||||||| ||| |||| |   |||  |||||||| ||||||| |||| || |||||||| | ||||||||||    
T  35366447 tcattttctttgtccaaaattataagcaaaaaagatcaacttttatcatatttaattatgttgtttcaaa-aaattatattttccaaagaaaaattaaat 35366349  T
Q  176 gcaaattgcattcaatttg 194  Q
     |||| |||||||||||||    
T  35366348 tcaaagtgcattcaatttg 35366330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 42724082 - 42724152
Alignment:
Q  147 aaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    ||||||||||||| || || ||||||||||||||||||||| |||||| ||||| | | ||||||| |||||    
T  42724082 aaatcatcttttcaaa-gtgaaattaaatgcaaattgcatttaatttgctctccctatcattttcttcataa 42724152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 113
Target Start/End: Complemental strand, 43667527 - 43667497
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagac 113  Q
    |||||||||||||||||||||||||||||||    
T  43667527 ttctttgtctcaaaatataagcaaaaaagac 43667497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 13291778 - 13291847
Alignment:
Q  149 atcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    ||||||||||||||||  ||| ||||||||||||||| ||| |||| || || || ||||||||| ||||    
T  13291778 atcatcttttccaatgagaaaataaatgcaaattgcactcattttggtcccccttatattttctcaataa 13291847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 45840220 - 45840167
Alignment:
Q  166 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||||||||||||| ||||||||||||| |||| |||| ||||| || |||||    
T  45840220 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttttctataat 45840167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 51840686 - 51840630
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcatt 187  Q
    ||||| |||||||||| |||||||||||||||| |  ||||||||||||| |||||||    
T  51840686 attatattttttcaaa-aaatcatcttttccaaagagaaattaaatgcaatttgcatt 51840630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 298931 - 298895
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  298931 ctcattttctttgtctcaaaatgtaagcaaaaaagac 298895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 4672796 - 4672840
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaattttt 121  Q
    ||||| ||||||||| ||||||||||||||||||||  |||||||    
T  4672796 ctcattttctttgtcccaaaatataagcaaaaaagataaattttt 4672840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 6786734 - 6786770
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  6786734 ctcattttctttgtcccaaaatataagcaaaaaagac 6786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 7468217 - 7468181
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  7468217 ctcattttctttgtcccaaaatataagcaaaaaagac 7468181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 28017008 - 28016972
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  28017008 ctcattttctttgtcccaaaatataagcaaaaaagac 28016972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 37192926 - 37192870
Alignment:
Q  147 aaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctccttt 203  Q
    |||| ||||||||||| || |||||| |||||||  |||||||||||||||| ||||    
T  37192926 aaattatcttttccaaagtgaaattatatgcaaacggcattcaatttgttcttcttt 37192870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 37735537 - 37735485
Alignment:
Q  167 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| ||||||||||  |||| |||  ||||||||||||||    
T  37735537 aaattaaatgcaaattacattcaattttctctcttttccattttctccataat 37735485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 35259939 - 35260135
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  35259939 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttc 35260038  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35260039 aaacaaatcatcttttccaatgtaaaattaaatgcaaattccattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 35260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 37597952 - 37598148
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| |||  |||||||||||||||    
T  37597952 tactccctccgtcctaaaatataagcaaaacattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttgttattatgttttttc 37598051  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37598052 aaacaaatcattttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 37598148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 24612760 - 24612563
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||    
T  24612760 gtactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt 24612661  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24612660 caaacaaatcatctttttcaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 24612563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 27621012 - 27621208
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||||||||||  |||||||||||       |||||||||||||||||||| ||||||||||||||||| || |||| ||  ||||||||||||||||    
T  27621012 tactccctccgtcgcaaaatataagcaaaaaaatctcatattctttgtctcaatatataagcaaaaaagacaaacttttatgctattattatgttttttc 27621111  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27621112 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 27621208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 3099834 - 3100031
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttt-tt 141  Q
    ||||||||||||||||||||||||||       |||||| |||||||| |||||||||||||||||||||| |  |||| ||  ||||||||||||| ||    
T  3099834 tactccctccgtcttaaaatataagcaaaaaaatctcattttctttgtttcaaaatataagcaaaaaagacaatcttttatgctattattatgttttttt 3099933  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3099934 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 3100031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 11043939 - 11044135
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  11043939 tactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttc 11044038  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11044039 aaataaatcatattttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttctccataatttttaaccaatgagaattat 11044135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 44411490 - 44411292
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaa-gaccaatttttgtgtcattattatgttttt 140  Q
    |||||||||||||| ||||||||||||       ||||||||||||| ||||||||||||||||||||| |||||| |||| ||  |||||||| |||||    
T  44411490 gtactccctccgtcctaaaatataagctaaaaattctcatattctttttctcaaaatataagcaaaaaaagaccaacttttatgctattattatattttt 44411391  T
Q  141 tcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44411390 tcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattat 44411292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 35344248 - 35344445
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||||||| || ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  35344248 tactccctccatcctaaaatataagcaaaaatttctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattatgttttttc 35344347  T
Q  143 aaacaaatcatcttttc-caatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  35344348 aaacaaatcattttttttcaatgtaaaattaaatgcaaattgcattcaatgtattctcctttttattttctccataatttttaaccaatgagaattat 35344445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 44052535 - 44052699
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttt-ttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    |||||| |||||| ||||||||||||||||||||| ||||| |||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44052535 tctcattttctttatctcaaaatataagcaaaaaaaaccaacttttatgttattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaa 44052634  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44052635 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 44052699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 32678789 - 32678592
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||||||||||||||||       | |||| |||||||| | |||||||||||||||||||  || |||| ||| |||||||||||||||    
T  32678789 gtactccctccgtcttaaaatataagcaaaaaaatatcattttctttgttttaaaatataagcaaaaaagataaacttttatgttattattatgtttttt 32678690  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32678689 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttattttctccataatttttaaccaatgagaattat 32678592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 27752468 - 27752664
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||| |||||| ||||||||||||       | |||| |||||||||||||||||||| ||||||||||||| |||| ||  ||| ||||||||||||    
T  27752468 tactccttccgtcctaaaatataagcaaaaaaatatcattttctttgtctcaaaatataaacaaaaaagaccaacttttatgctatttttatgttttttc 27752567  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27752568 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattat 27752664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 36537940 - 36538136
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||| |||||| ||||||||||||       |||||| ||||||||||||||||||||||||||||||| || |||| ||  ||| ||||||||||||    
T  36537940 tactccatccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctatttttatgttttttc 36538039  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  36538040 aaacaaatcatcttttccaatgtaaaattaaatgcaatttgcatttaatttattctcctttttattttctccatgatttttaaccaatgagaattat 36538136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 11992609 - 11992806
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttt-tt 141  Q
    ||||||||||||| ||||||||||||       | ||||||||||||| | ||||||||||||||||| ||| | |||| ||  ||||||||||||| ||    
T  11992609 tactccctccgtcctaaaatataagcaaaaaaatttcatattctttgtattaaaatataagcaaaaaaaacctacttttatgctattattatgttttttt 11992708  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  11992709 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttcacctttttcttttctccataatttttaaccaatgagaattat 11992806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 33851303 - 33851106
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||| ||||||||||||       |||||| ||||||| |||||||||||||||||||||| ||| |||| ||  ||| |||||||||||    
T  33851303 gtactccctccgtcctaaaatataagcaaaaaaatctcattttctttgcctcaaaatataagcaaaaaagatcaacttttatgctatttttatgtttttt 33851204  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  33851203 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttttcctttttattttctccatgatttttaactaatgagaattat 33851106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 25321865 - 25321669
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||| ||| ||||||||||||       ||| || |||||||||||||||||||||||||||||||||| |||| ||  ||| ||||||||||||    
T  25321865 tactccctctgtcctaaaatataagcaaaaaaatcttattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttc 25321766  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  25321765 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgctctcctttttattttctccataatttttaacctatgaaaattat 25321669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 35346550 - 35346387
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||||||||||||||||||||||||  |||||||| ||| |||| ||  |||||||||||||||||||||||||||||||| |||||||||||| |||    
T  35346550 tctcatattctttgtctcaaaatataaataaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatctttttcaatgtaaaattgaat 35346451  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||    
T  35346450 gcaaattgcattcaatgtattctcctttttattatctccataatttttaaccaatgagaattat 35346387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 44358716 - 44358574
Alignment:
Q  97 atataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgtt 196  Q
    |||||||||||||||| ||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44358716 atataagcaaaaaagatcaacttttatgttattattacgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgtt 44358617  T
Q  197 ctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  44358616 ctcctttttattttctccataatttttaattaatgagaattat 44358574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 39187149 - 39187311
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaat-ttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    |||||||||||  |||||||||||||||||||||| | |||  |||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  39187149 tctcatattct--gtctcaaaatataagcaaaaaaaaacaaacttttatgctattattatgttttttcaaacaaatcatcatttccaatgtaaaattaaa 39187246  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39187247 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattat 39187311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 31133219 - 31133112
Alignment:
Q  132 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatg 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31133219 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattttttctcctttttattttctccataatttttaaccaatg 31133120  T
Q  232 agaattat 239  Q
    ||||||||    
T  31133119 agaattat 31133112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 37567648 - 37567514
Alignment:
Q  105 aaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttt 204  Q
    |||||| ||||| |||| ||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37567648 aaaaaataccaacttttatgctattattatgttttttcagacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttttcctttt 37567549  T
Q  205 tattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||| |||||||||||||    
T  37567548 tattttctccataatttttaatcaatgagaattat 37567514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 76 - 232
Target Start/End: Original strand, 12108084 - 12108240
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaaga-ccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||||||| ||| ||||||||||||||||||||| | |||| |||| || ||||||||| |||||||||||||||||| ||||| ||||||||||| ||    
T  12108084 tctcatattttttatctcaaaatataagcaaaaaaaaaccaacttttatgccattattatattttttcaaacaaatcattttttc-aatgtaaaattcaa 12108182  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatga 232  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12108183 tgcaaattgcattcaatttgttttcctttttattttctccataatttttaaccaatga 12108240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 34713511 - 34713606
Alignment:
Q  144 aacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34713511 aacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 34713606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 230
Target Start/End: Complemental strand, 2238828 - 2238685
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||| |||||||||  ||||||||||||||||||||||| || ||           |||| ||||||| |||||||||||||||| ||||||||||||    
T  2238828 tctcattttctttgtcctaaaatataagcaaaaaagaccaacttctg-----------tgttatttcaaaaaaatcatcttttccaaagtaaaattaaat 2238740  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 230  Q
    |||||| ||||||||||||||||||||| ||||  |||||| ||| |||||||||    
T  2238739 gcaaatcgcattcaatttgttctcctttctattcactccatgattattaaccaat 2238685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 230
Target Start/End: Complemental strand, 24510930 - 24510787
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||| ||||||||| |||||||||||  ||||||||||||||||           ||||| ||||||| ||||||| |||||||| |||  |||||||    
T  24510930 tctcattttctttgtcccaaaatataagttaaaaagaccaattttt-----------atgttatttcaaaaaaatcattttttccaaagtagtattaaat 24510842  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 230  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||  |||||||||    
T  24510841 gcaaattgcattcaatttgttctactttttattctatccataatcattaaccaat 24510787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 41426325 - 41426408
Alignment:
Q  147 aaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 230  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||  |||||||||    
T  41426325 aaatcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttatcctttctattatctccataatcattaaccaat 41426408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 40487859 - 40487794
Alignment:
Q  127 attattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 193  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  40487859 attattatgttttt-caaacaaatcatcttttccaatgtaaaattcaatgcaagttgcattcaattt 40487794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 8673302 - 8673438
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaatt 182  Q
    ||||||||| |||| ||||||||||||||||||| |||| |   ||| ||  || |||| ||| |||| ||||||||||| | ||||||||||||||| |    
T  8673302 ttctttgtcccaaattataagcaaaaaagaccaacttttatcatattttttagtgtttttaaaaaaattatcttttccaaaggaaaattaaatgcaaagt 8673401  T
Q  183 gcattcaatttgttctcctttttattttctccataat 219  Q
     ||||||||||| |||| |||| |||||||| |||||    
T  8673402 acattcaatttgctctctttttcattttctctataat 8673438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 16635490 - 16635620
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttt-ttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    |||||| |||||||||  |||||||||| || ||||||||| |||| ||  |||| |||||||| |||||| ||||||||||||| || |||||||| ||    
T  16635490 tctcattttctttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgttttcttcaaa-aaatcatcttttcaaaagtaaaatttaa 16635588  T
Q  175 tgcaaattgcattcaatttgttctccttttta 206  Q
    | |||||| ||||||| ||||| |||||||||    
T  16635589 ttcaaatttcattcaagttgttttccttttta 16635620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 25195237 - 25195149
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| || | ||||||||||| | ||||||||||||||| ||||||||||||| |||| |||| |||||||| |||||    
T  25195237 attatgttttttcaaa-aacttatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataat 25195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 41791651 - 41791563
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||| |||||||||| ||||||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||||||| |||||    
T  41791651 attatcttttttcaaa-aaatcatcttttccaaaagaaaattaaatgtaaaatgcattcaatttgctctcttttttattttctctataat 41791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 16643369 - 16643457
Alignment:
Q  147 aaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaa 235  Q
    |||||| |||||  || ||||||||||||||||||| ||||||| || || ||||||||||||||||||||||  || |||||||||||    
T  16643369 aaatcaactttttaaaagtaaaattaaatgcaaattacattcaagttattttcctttttattttctccataatcattgaccaatgagaa 16643457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 16635354 - 16635488
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt-----caaacaaatcatcttttccaatgtaaaat 170  Q
    |||||| |||||||||  |||||||||| || ||||||||| |||| ||  |||| ||||||||||     |||| ||||||||||||| || |||||||    
T  16635354 tctcattttctttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgttttttttcttcaaa-aaatcatcttttcaaaagtaaaat 16635452  T
Q  171 taaatgcaaattgcattcaatttgttctccttttta 206  Q
    | ||| |||||||||||||| ||||| |||||||||    
T  16635453 ttaattcaaattgcattcaagttgttttccttttta 16635488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 17336713 - 17336799
Alignment:
Q  132 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||| |||| |||||||| || | ||||||||||||||| ||||||||||||| ||||||||| |||| ||| |||||    
T  17336713 tatgttttttcaaa-aaattatcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataat 17336799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 34899894 - 34899979
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccat 216  Q
    |||||||| ||||||| ||||||||||||| || |||||||||||||| |||| ||||||||||||| | |||| || |||||||||    
T  34899894 attatgttatttcaaa-aaatcatcttttctaaagtaaaattaaatgctaatttcattcaatttgtttttctttatactttctccat 34899979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 219
Target Start/End: Original strand, 17314744 - 17314887
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| ||||||||  |||| ||||||||||||||| ||| |||| |   |||  |||||||||||||||| || | |||||||| ||   |||||||||    
T  17314744 ctcattttctttgttccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaa-aacttatcttttctaaaagaaaattaaa 17314842  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    | |||| ||||||||||||| ||||||||| |||||||| |||||    
T  17314843 tccaaagtgcattcaatttgctctccttttcattttctctataat 17314887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 31133859 - 31133765
Alignment:
Q  47 ccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    ||||||||||| ||||||||||       | |||||||||||||||||||||||||| |||||||||||| |||| ||  ||| |||||||||||    
T  31133859 ccctccgtcttgaaatataagcaaaaaaatttcatattctttgtctcaaaatataagaaaaaaagaccaacttttatgctattgttatgtttttt 31133765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 41362498 - 41362410
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| |||| ||||||||||| | ||||||||||||||| |||||| |||||| || | |||| |||||||| |||||    
T  41362498 attatgttttttcaaa-aaattatcttttccaaaggaaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataat 41362410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 16635622 - 16635756
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt-----caaacaaatcatcttttccaatgtaaaat 170  Q
    |||||| || ||||||  |||||||||| || ||||||||| |||| ||  |||| ||||||||||     |||| ||||||||||||| || |||||||    
T  16635622 tctcattttatttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgttttttatcttcaaa-aaatcatcttttcaaaagtaaaat 16635720  T
Q  171 taaatgcaaattgcattcaatttgttctccttttta 206  Q
    | ||| |||||||||||||| ||||| |||||||||    
T  16635721 ttaattcaaattgcattcaagttgttttccttttta 16635756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 17713137 - 17713252
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| ||||||||| |||| |||||| |||||||||||| |||| |   |||  ||||| || |||||| ||||| ||||||||||| | |||||||||    
T  17713137 ctcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattgtttcaa-caaattatcttttccaaaggaaaattaaa 17713235  T
Q  175 tgcaaattgcattcaat 191  Q
    |||||| ||||||||||    
T  17713236 tgcaaagtgcattcaat 17713252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 27819632 - 27819715
Alignment:
Q  134 tgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    |||| ||||||| |||||||||||| ||| | ||||||||||||||| | |||| |||||| ||||| |||||||||||| ||||    
T  27819632 tgttatttcaaa-aaatcatctttttcaaaggaaaattaaatgcaaactacatttaatttgctctcccttttattttctctataa 27819715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 16635786 - 16635871
Alignment:
Q  108 aaagaccaatttttgtgtcattattatgtttt--ttcaaacaaatcatcttttccaatgtaaaa-ttaaatgcaaattgcattcaa 190  Q
    |||||||||||||| ||  |||| ||||||||  |||||| ||||||||||||| || |||||| ||||||||||||| |||||||    
T  16635786 aaagaccaatttttatgctattactatgttttctttcaaaaaaatcatcttttcaaaagtaaaaattaaatgcaaatttcattcaa 16635871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 16643214 - 16643284
Alignment:
Q  127 attattatgttttttc-aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgtt 196  Q
    |||||||||||||||  ||||||||||||||||| || ||||||| |||||||||||  |||||| |||||    
T  16643214 attattatgttttttttaaacaaatcatcttttcaaaagtaaaataaaatgcaaattatattcaagttgtt 16643284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 13144226 - 13144190
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13144226 ctcattttctttgtctcaaaatataagcaaaaaagac 13144190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 28497704 - 28497641
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 194  Q
    |||||||| ||||||| |||| ||||||||||| | ||||||||||||| | |||||||||||||    
T  28497704 attatgttatttcaaa-aaattatcttttccaaaggaaaattaaatgcatagtgcattcaatttg 28497641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 14693376 - 14693434
Alignment:
Q  155 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctc 213  Q
    |||||||| | |||||||||| |||| ||||||||||||| |||| |||| ||||||||    
T  14693376 ttttccaaagaaaaattaaatacaaagtgcattcaatttgctctctttttcattttctc 14693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 30576086 - 30576048
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaattttt 121  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  30576086 ttctttgtcccaaaatataagcaaaaaagacaaattttt 30576048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 4039037 - 4038984
Alignment:
Q  166 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||||||||| ||| ||||||||||||| |||| |||| |||||||| |||||    
T  4039037 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataat 4038984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 29147393 - 29147340
Alignment:
Q  166 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||||||||||||| |||||| |||||| ||||| ||| |||||||| |||||    
T  29147393 aaaattaaatgcaaactgcatttaatttgatctccatttcattttctctataat 29147340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 36190775 - 36190828
Alignment:
Q  165 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    |||||||||||||||||| ||||||||||  ||||  ||||||||| |||||||    
T  36190775 taaaattaaatgcaaattacattcaattttctctctcttttattttttccataa 36190828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 40486628 - 40486575
Alignment:
Q  186 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||| |||| ||||||||||||||| ||||||||||| ||| | ||||||    
T  40486628 ttcaatttattcttctttttattttctccttaatttttaactaataaaaattat 40486575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 4047159 - 4047123
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  4047159 ctcattttctttgtcccaaaatataagcaaaaaagac 4047123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 14576301 - 14576249
Alignment:
Q  166 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    ||||||||||||||| ||||||||||||| ||||  ||| |||||||| ||||    
T  14576301 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataa 14576249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 15958143 - 15958103
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgt 123  Q
    ||||||||| |||||||||||||||||| || |||||||||    
T  15958143 ttctttgtcccaaaatataagcaaaaaatacaaatttttgt 15958103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 34890439 - 34890403
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  34890439 ctcattttctttgtcccaaaatataagcaaaaaagac 34890403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 36190666 - 36190702
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  36190666 ctcattttctttgtcccaaaatataagcaaaaaagac 36190702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 45598782 - 45598978
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||| ||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  45598782 tactccctccgtcctaaaatataagcaaaaaaatctcatgttctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttc 45598881  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45598882 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 45598978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 43108142 - 43107945
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt- 141  Q
    ||||||||| ||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||     
T  43108142 tactccctcggtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttt 43108043  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43108042 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 43107945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 35181070 - 35181266
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||||||||| ||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  35181070 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcagaatataagcaaaaaagaccaacttttatgctattattatgttttttc 35181169  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35181170 aaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattat 35181266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 41889049 - 41889245
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||| |||||||||||||||||||       | ||||||||||||||||||||||||||||||||| | ||| |||| || |||||||||||||||||    
T  41889049 tactccatccgtcttaaaatataagcaaaaaaatatcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgccattattatgttttttc 41889148  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41889149 aaacaaatcatcttttccaatgtaaaattcaaagcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 41889245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 34808097 - 34808293
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||  ||||||||||||       ||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  34808097 tactccctccgttctaaaatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattattatgttttttc 34808196  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  34808197 aaacaaatcatctttttcaacgtaaaattaaatgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaataagaattat 34808293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 23106329 - 23106527
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaa-gaccaatttttgtgtcattattatgttttt 140  Q
    ||||| |||||||| ||||||||||||       || |||||| ||||||||||||||||||||||||| ||| || |||| ||  ||||||||||||||    
T  23106329 gtacttcctccgtcctaaaatataagcaaaaaaatcacatattatttgtctcaaaatataagcaaaaaaagactaacttttatgctattattatgttttt 23106428  T
Q  141 tcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23106429 tcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 23106527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 44600323 - 44600520
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||    
T  44600323 gtactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgtttttt 44600422  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  44600423 caaataaatcatcttttccagtgtaaaattaaatgcaagttgcattcaatttgttctcttttttgttttctccataatttttaaccaatgaaaattat 44600520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 21654357 - 21654161
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||| ||||||||||||||||||| |||||| |||||| |||| ||  ||||||||||||||||    
T  21654357 tactccctccgtcctaaaatataagcaaaaaaatctcataatctttgtctcaaaatataaacaaaaaggaccaacttttatgctattattatgttttttc 21654258  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21654257 aaacaaatcaccttttccaatgtaaaattaaatgcaaattacattcaatttgttctccttttcattttctccataatttttaaccaatgagaattat 21654161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 41815929 - 41815733
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||    
T  41815929 tactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttc 41815830  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||| ||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41815829 aaataaatcatattttccaatgtaaaattaaatgtaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 41815733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 49 - 239
Target Start/End: Original strand, 47383290 - 47383480
Alignment:
Q  49 ctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaa 148  Q
    ||||||||||||||||||||       | |||  |||||||||||||||||||||||||||| ||||| |||| ||  ||||||||||||||||||||||    
T  47383290 ctccgtcttaaaatataagcaaaaaaatatcactttctttgtctcaaaatataagcaaaaaataccaacttttatgatattattatgttttttcaaacaa 47383389  T
Q  149 atcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47383390 atcatcttttccaatgtaaaattaaatgtaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaattat 47383480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 40560260 - 40560456
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||| || |||||||||||||||||||| ||||||||||| |||||| ||  ||| ||||||||||||    
T  40560260 tactccctccgtcctaaaatataagcaaaaaaatcttattttctttgtctcaaaatataatcaaaaaagacccatttttatgctatttttatgttttttc 40560359  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40560360 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattat 40560456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 48879299 - 48879462
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    ||||||||| ||| ||| |||||||||| |||||||||||| |||| ||| ||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  48879299 tctcatattttttatcttaaaatataagtaaaaaagaccaacttttatgttattattatgttttttcaaaaaaatcatctttttcaatgtaaaattaaat 48879398  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48879399 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 48879462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 3157314 - 3157510
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||  ||||||||||||       | |||| ||| ||||||||||||||||||||||||||| || |||| ||  |||||||||| |||||    
T  3157314 tactccctccgttctaaaatataagcaaaaaaatttcattttccttgtctcaaaatataagcaaaaaagactaacttttatgctattattatgtattttc 3157413  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3157414 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttttcctttttattttctccataatttttaaccaatgagaattat 3157510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 40583068 - 40583219
Alignment:
Q  88 tgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcatt 187  Q
    ||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  40583068 tgtctcaaaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgcatt 40583167  T
Q  188 caatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40583168 caatttattctcctttttattttctccataatttttaaccaatgagaattat 40583219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 36576329 - 36576492
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||| ||||||||||||||||||||| ||||||||| || |||| ||  ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36576329 tctcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaataaatcatcttttccaatgtaaaattaaat 36576428  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  36576429 gcaagttgcattcaatttgttctcctttttgttttctccataatttttaaccaatgaaaattat 36576492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 42617549 - 42617745
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||||||| || ||||||||||||       ||||||||||||| |||||||||||||||||||||||| || | || ||  ||||||||||||||||    
T  42617549 tactccctccatcctaaaatataagcaaaaaaatctcatattctttttctcaaaatataagcaaaaaagacaaactcttatgatattattatgttttttc 42617648  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  42617649 aaacaaattatttttttcaatgtaaaattaaatgcaaattgcattcaatttgtgctcctttttattttctccataatttttaaccaattagaattat 42617745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 19933292 - 19933095
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||  ||||||||||||       | |||| |||||| |||||||||||||||||||||||  || |||| ||  ||| |||||||||||    
T  19933292 gtactccctccgttctaaaatataagcaaaaaaatttcattttctttatctcaaaatataagcaaaaaagataaacttttatgctatttttatgtttttt 19933193  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19933192 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattat 19933095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 19964431 - 19964234
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||  ||||||||||||       | |||| |||||| |||||||||||||||||||||||  || |||| ||  ||| |||||||||||    
T  19964431 gtactccctccgttctaaaatataagcaaaaaaatttcattttctttatctcaaaatataagcaaaaaagataaacttttatgctatttttatgtttttt 19964332  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19964331 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattat 19964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 95 - 239
Target Start/End: Complemental strand, 22111514 - 22111370
Alignment:
Q  95 aaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 194  Q
    |||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||     
T  22111514 aaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgcattcaattta 22111415  T
Q  195 ttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22111414 ttctcctttttattttctccataatttttaaccaatgagaattat 22111370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 23731483 - 23731634
Alignment:
Q  88 tgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcatt 187  Q
    ||||||||||||||||||||||||| ||| |||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23731483 tgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatt 23731582  T
Q  188 caatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
     ||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  23731583 taatttgttctcctttttattttctccataatttttaatcaacgagaattat 23731634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 45 - 239
Target Start/End: Complemental strand, 32491340 - 32491147
Alignment:
Q  45 ctccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaa 144  Q
    ||||||||||| ||||||||||||       ||| || |||||||||| ||||||||||||||||| ||||| |||| ||  ||| ||||||||||||||    
T  32491340 ctccctccgtcctaaaatataagcaaaaaaatcttattttctttgtctgaaaatataagcaaaaaaaaccaacttttatgctatt-ttatgttttttcaa 32491242  T
Q  145 acaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  32491241 acaaatcatcttttcgaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttgttttctccataatttttaaccaatgaaaattat 32491147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 78 - 239
Target Start/End: Complemental strand, 48938088 - 48937929
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt-caaacaaatcatcttttccaatgtaaaattaaatg 176  Q
    ||||||||||||||| ||||||||||||||||    ||| |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  48938088 tcatattctttgtcttaaaatataagcaaaaat---caacttttgtgctattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaata 48937992  T
Q  177 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  48937991 caaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattat 48937929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 78 - 239
Target Start/End: Complemental strand, 48943114 - 48942955
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt-caaacaaatcatcttttccaatgtaaaattaaatg 176  Q
    ||||||||||||||| ||||||||||||||||    ||| |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  48943114 tcatattctttgtcttaaaatataagcaaaaat---caacttttgtgctattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaata 48943018  T
Q  177 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  48943017 caaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattat 48942955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 41890496 - 41890282
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatg------- 135  Q
    |||||| |||||| ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||           
T  41890496 tactccttccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattatggtgaacg 41890397  T
Q  136 -----------ttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataattttta 224  Q
               |||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  41890396 tattattatgtttttttcaaacaaatcatcttttttaatgtaaaattaaatgcaaattacattcaatttgttcttctttttattttctccataattttta 41890297  T
Q  225 accaatgagaattat 239  Q
    |  ||||||||||||    
T  41890296 attaatgagaattat 41890282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 18206544 - 18206359
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| |||||||||||        | |||| |||||||||||||||||||||||||||| ||||  ||||           ||||||||||    
T  18206544 tactccctccgtcctaaaatataagtaaaaaaatatcattttctttgtctcaaaatataagcaaaaaaaaccatctttt-----------atgttttttc 18206456  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18206455 aaacaaatcatctttttcaatgtaaaattaaatgcaagttgtatttaatttgttctcctttttattttttccataatttttaaccaatgagaattat 18206359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 9818392 - 9818542
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||| |||||| ||||||||||||||||||||||||||| |||| ||| |||||| |  |||||||||||||||||||||||||||||||||||||||    
T  9818392 tctcattttctttttctcaaaatataagcaaaaaagaccaacttttatgttattatttt--tttttcaaacaaatcatcttttccaatgtaaaattaaat 9818489  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |           | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9818490 g-----------ccatttgttctcctttttattttctccataatttttaaccaatgagaattat 9818542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 10720317 - 10720467
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||| |||||| ||||||||||||||||||||||||||| |||| ||| |||||| |  |||||||||||||||||||||||||||||||||||||||    
T  10720317 tctcattttctttttctcaaaatataagcaaaaaagaccaacttttatgttattatttt--tttttcaaacaaatcatcttttccaatgtaaaattaaat 10720414  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |           | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10720415 g-----------ccatttgttctcctttttattttctccataatttttaaccaatgagaattat 10720467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 76 - 237
Target Start/End: Original strand, 30082275 - 30082425
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||           ||||| ||||||| |||||||||||||||| ||||||||||||    
T  30082275 tctcattttctttgtcccaaaatataagcaaaaaagaccaattttt-----------atgttatttcaaaaaaatcatcttttccaaagtaaaattaaat 30082363  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    |||||||||||||||||| ||||| ||| |||| ||||||||||  ||||||||| ||||||    
T  30082364 gcaaattgcattcaatttattctcttttctattctctccataatcattaaccaataagaatt 30082425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 39348708 - 39348843
Alignment:
Q  84 tctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattg 183  Q
    |||||||  |||||||||||||||||||||||| |||| ||  |||||| |||| ||||||| || | ||||||||||| ||||||||||||||||||||    
T  39348708 tctttgtaccaaaatataagcaaaaaagaccaacttttatgctattattgtgttgtttcaaaaaattaatcttttccaaagtaaaattaaatgcaaattg 39348807  T
Q  184 cattcaatttgttctcctttttattttctccataat 219  Q
     ||||||||||||||||||| ||||||||| |||||    
T  39348808 tattcaatttgttctcctttctattttctcgataat 39348843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 39337445 - 39337584
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaa---tcatcttttccaatgtaaaattaaatgcaa 179  Q
    ||||||||| |||||||||||||||||| ||||| |||| ||  |||||| |||| ||||||| |||   |||||||||||||  ||||| |||||||||    
T  39337445 ttctttgtcccaaaatataagcaaaaaataccaacttttatgctattattgtgttgtttcaaaaaaaaaatcatcttttccaaattaaaactaaatgcaa 39337544  T
Q  180 attgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  39337545 attgcattcaaattgttctcctttctattttctccataat 39337584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 7989432 - 7989348
Alignment:
Q  155 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  7989432 tttttcaatgtaaaattaaatgcaagttgcattcaatttgttatcctttttattttcttcataatttttaaccaatgagaattat 7989348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 33153013 - 33153111
Alignment:
Q  139 tttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    ||||||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| ||||||    
T  33153013 tttcaaaaaaattatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 33153111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 35084253 - 35084143
Alignment:
Q  127 attattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaac 226  Q
    |||||||||||| |||| | |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||| |    
T  35084253 attattatgtttcttcataaaaatcatcctttccaaagtaaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatc 35084154  T
Q  227 caatgagaatt 237  Q
    |||| ||||||    
T  35084153 caataagaatt 35084143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 28608338 - 28608445
Alignment:
Q  131 ttatgttttttcaaaca-aatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 229  Q
    ||||||| ||||||| | |||||  |||||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||  || |||||    
T  28608338 ttatgttatttcaaaaagaatcacattttccaaagtaaaattaaatgcaaattgcattcaatttgttctcttttctattctctccataataattgaccaa 28608437  T
Q  230 tgagaatt 237  Q
    | ||||||    
T  28608438 taagaatt 28608445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 29236215 - 29236117
Alignment:
Q  131 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 230  Q
    ||||||| ||||||| |||||||||||| | | ||||||||||||  |||||||||||||||| |||||||||||||| ||||||||||  |||||||||    
T  29236215 ttatgttatttcaaaaaaatcatcttttacgaagtaaaattaaatataaattgcattcaattt-ttctcctttttattctctccataatcattaaccaat 29236117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 31769151 - 31769063
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| | || ||||||||||| | ||||||||||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  31769151 attatgttttttcaaa-atattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctcatttttattttctctataat 31769063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 35888158 - 35888070
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| |||| ||||||||||| | ||||| ||||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  35888158 attatgttttttcaaa-aaattatcttttccaaaggaaaataaaatgcaaagtgcattcaatttgctctcttttttattttctctataat 35888070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 7989493 - 7989425
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaa 144  Q
    |||||| || ||||| |||||||||||| |||||||||||| |||| ||| ||||||||||||||||||    
T  7989493 tctcattttatttgtttcaaaatataagtaaaaaagaccaacttttatgttattattatgttttttcaa 7989425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 18800922 - 18800834
Alignment:
Q  131 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||||| ||||||  |||||||||||| ||| ||||||||||||| ||||||||||||||||| |||  ||| ||||  |||||||||    
T  18800922 ttatgttatttcaagaaaatcatctttttcaaagtaaaattaaatgtaaattgcattcaatttgctcttatttctattccctccataat 18800834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 48339389 - 48339322
Alignment:
Q  152 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||  |||||||||||||||| |||||| ||||| |||| |||| |||||||||||||||    
T  48339389 atcttttccaaactaaaattaaatgcaaactgcatttaatttattcttctttctattttctccataat 48339322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 47778635 - 47778713
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaattttt 121  Q
    ||||||||||||||| ||||||||||        ||||| ||||||||| ||||||||||||||||||||| |||||||    
T  47778635 tactccctccgtcttgaaatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaattttt 47778713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 38260231 - 38260395
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaa-tttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaa 173  Q
    ||||| ||||||||| |||| |||||| |||||| || || ||||| ||  |||  ||||| || ||||||| |||| |||||||||||   ||||||||    
T  38260231 ctcattttctttgtcccaaattataagtaaaaaatacaaactttttatgatatttaattatattgtttcaaa-aaattatcttttccaaatgaaaattaa 38260329  T
Q  174 atgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||| |||||| |||||| ||||  ||| |||||||| |||||   |||||||||| ||||||    
T  38260330 atgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattat 38260395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 37767252 - 37767139
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaatt 182  Q
    |||||||||  ||| |||||| ||||||||| || ||||||  | | |||||||| ||||||| ||    ||||||||||  | ||||||| ||||||||    
T  37767252 ttctttgtcctaaattataagtaaaaaagacaaacttttgtcccttaattatgttatttcaaaaaa----tcttttccaaaatgaaattaagtgcaaatt 37767157  T
Q  183 gcattcaatttgttctcc 200  Q
    ||||| ||||||||||||    
T  37767156 gcatttaatttgttctcc 37767139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 22369197 - 22369255
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattca 189  Q
    |||||||||||||||| ||||||||||||| || |  ||||||||||||| |||||||||    
T  22369197 attatgttttttcaaa-aaatcatcttttcaaaggagaaattaaatgcaatttgcattca 22369255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 28843653 - 28843558
Alignment:
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    |||| ||||||||||||||||  |||||||||||  ||||| |||| |||||  ||| |||| |||| ||||||||||  |||| |||| ||||||    
T  28843653 caaaaaaatcatcttttccaaaataaaattaaatataaattacatttaattttatctactttctattctctccataatcattaatcaataagaatt 28843558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 194
Target Start/End: Complemental strand, 28941320 - 28941277
Alignment:
Q  151 catcttttccaatgtaaaattaaatgcaaattgcattcaatttg 194  Q
    |||||||||||| || ||||||||||||||||||||| ||||||    
T  28941320 catcttttccaaagtgaaattaaatgcaaattgcattaaatttg 28941277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 6882378 - 6882439
Alignment:
Q  137 tttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctc 199  Q
    ||||||||| ||||||| |||| ||| | ||||||||||| |||||||||| |||||||||||    
T  6882378 tttttcaaa-aaatcatatttttcaaagaaaaattaaatgaaaattgcatttaatttgttctc 6882439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 18800966 - 18800929
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  18800966 tctcattttctttgtcccaaaatataagcaaaaaagac 18800929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 25944581 - 25944634
Alignment:
Q  165 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    |||||||||||||||||| ||||||||||  ||||  ||||||||| |||||||    
T  25944581 taaaattaaatgcaaattacattcaattttctctctcttttattttttccataa 25944634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 39970233 - 39970037
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  39970233 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttc 39970134  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39970133 aaccaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 39970037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 29180656 - 29180460
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||    
T  29180656 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagacaaacttttatgttattattatgttttttc 29180557  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29180556 aaagaaattatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 29180460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 30776728 - 30776532
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  30776728 tactccctccgtcctaaaatataagcaaaaaaatctcatattatttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttc 30776629  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30776628 aaagaaattatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 30776532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 30777363 - 30777559
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  30777363 tactccctccgtcctaaaatataagcaaaaaaatctcatattatttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttc 30777462  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30777463 aaagaaattatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 30777559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 52712939 - 52713135
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||    
T  52712939 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagtaaaaaagaccaatttttatgctattattatgttttttc 52713038  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  52713039 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcatttaatttgttctcctttttattttctccataattttcaaccaataagaattat 52713135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 53677690 - 53677527
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53677690 tctcatattctttgtctcaaaatataagcaaaaaaaaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 53677591  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53677590 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 53677527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 3043411 - 3043215
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       | ||||||||||||||||||||||||||| ||||||| ||| |||| ||  ||||||||||||||||    
T  3043411 tactccctccgtcctaaaatataagcaaaaaattatcatattctttgtctcaaaatataagcgaaaaagatcaacttttatgctattattatgttttttc 3043312  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3043311 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattat 3043215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 10591746 - 10591551
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||| |||||||||||||||||| ||||||||| ||||||| ||  ||||||||||||||||    
T  10591746 tactccctccgtcctaaaatataagcaaaaaaatctcatattttttgtctcaaaatataag-aaaaaagactaatttttatgctattattatgttttttc 10591648  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  10591647 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattggttctcctttttattttttccataatttttaaccaatgagaattat 10591551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 49901935 - 49902099
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaat-ttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||||||||||||||||||||||||||||||||| | |||  |||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49901935 tctcatattctttgtctcaaaatataagcaaaaaaaaacaaacttttatgttattattatgttttttcaaacaaatcatcttttccaatataaaattaaa 49902034  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49902035 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 49902099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 32012571 - 32012375
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||||| |||| ||||||||||||       |||||| ||||||||||||||||||||||||||||||| || |||| ||  ||||||||||||||||    
T  32012571 tactcccttcgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctattattatgttttttc 32012472  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  32012471 aaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctctataatttttaaccaatgagaattat 32012375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 55937948 - 55937751
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||| ||||||||||||       |||||| |||||||||| ||||||||||||||||||||||| |||| ||  ||| |||||||||||    
T  55937948 gtactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtcttaaaatataagcaaaaaagaccaacttttatgatatttttatgtttttt 55937849  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  55937848 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgtatttaatttgttctcctttttatcttctccataatttttaaccaatgagaattat 55937751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 9798319 - 9798123
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||| ||| ||||||||||||||||||| ||| |||| ||  ||||||||||||||||    
T  9798319 tactccctccgtcctaaaatataagcaaaaaattctcatattctttatcttaaaatataagcaaaaaagatcaacttttatgctattattatgttttttc 9798220  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  9798219 aaacaaatcatcttttccaatgtaaaattaaatgcaaattggattcaatgtgttctcctttttattttctccataatttgtaatcaatgagaattat 9798123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 37788327 - 37788523
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||||||||||||||||       | |||| |||||| |||||||||||||| |||||||||||| |||| ||  ||| ||||||||||||    
T  37788327 tactccctccgtcttaaaatataagcaaaaaaatatcattttctttatctcaaaatataagtaaaaaagaccaacttttatgctatttttatgttttttc 37788426  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37788427 aaacaaatcatcttttccaatgtaaaattaaatgcaacttgcatttaatttgttctcttttttattttctccataatttttaaccaatgagaattat 37788523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 43980407 - 43980570
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    ||||||||||||||||| |||||||||| |||||| ||||| |||| ||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43980407 tctcatattctttgtcttaaaatataagtaaaaaataccaacttttatgctattattatattttttcaaacaaatcatcttttccaatgtaaaattaaat 43980506  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43980507 gcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattat 43980570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 50768354 - 50768517
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50768354 tctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 50768453  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50768454 gcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattat 50768517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 38940745 - 38940941
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       | |||| |||||||||||||||||||||||||||| ||||| |||| ||  ||||||||||||||||    
T  38940745 tactccctccgtcctaaaatataagcaaaaatatttcattttctttgtctcaaaatataagcaaaaaataccaacttttatgctattattatgttttttc 38940844  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||| ||||||||| |||||||||||||    
T  38940845 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttattcttctttttattttttccaaaatttttaatcaatgagaattat 38940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 1619938 - 1620101
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    ||||||||||||||||||||||||||| || |||| ||||| |||| ||  |||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  1619938 tctcatattctttgtctcaaaatataatcataaaacaccaacttttatgctattattatattttttcaaacaaatcatctttttcaatgtaaaattaaat 1620037  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1620038 gcaatttgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattat 1620101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 29899591 - 29899787
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       |||||| || ||||| |||| |||||||||||||||||||| |||| ||  ||| ||||||||||||    
T  29899591 tactccctccgtcctaaaatataagcaaaaaaatctcattttgtttgtttcaacatataagcaaaaaagaccaacttttatgctatttttatgttttttc 29899690  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  29899691 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcacctttttattttcttcatgatttttaaccaatgagaattat 29899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 38187971 - 38187774
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||| ||||||| || |       |||||| |||||| |||||||||||||| |||||||| ||| |||| ||  |||| ||||| ||||    
T  38187971 gtactccctccgtcctaaaatacaaacaaaaaaatctcattttctttatctcaaaatataagtaaaaaagatcaacttttatgctattagtatgtatttt 38187872  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  38187871 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcttttttattttctccataatttttaacaaatgagaattat 38187774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 94 - 236
Target Start/End: Original strand, 51495079 - 51495218
Alignment:
Q  94 aaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 193  Q
    ||||||||||||||||||| ||| |||| ||    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51495079 aaaatataagcaaaaaagatcaacttttatgc---tattatgtttttttaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 51495175  T
Q  194 gttctcctttttattttctccataatttttaaccaatgagaat 236  Q
     ||||||||||||||||||||||||||||||||||||||||||    
T  51495176 attctcctttttattttctccataatttttaaccaatgagaat 51495218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 47807157 - 47807267
Alignment:
Q  129 tattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaacca 228  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47807157 tattatgttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaacca 47807256  T
Q  229 atgagaattat 239  Q
    | |||||||||    
T  47807257 acgagaattat 47807267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 27750593 - 27750409
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    ||||| |||||||| ||||||||||||       | |||| |||||| |||||||||||||||| || ||||||| |||| ||  ||| ||||||| |||    
T  27750593 gtacttcctccgtcctaaaatataagcaaaaaaatttcattttctttatctcaaaatataagcataacagaccaacttttatgctatttttatgttattt 27750494  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaac 226  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||    
T  27750493 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttattttttccataatttttaac 27750409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 30012157 - 30012004
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaa--tcatcttttccaatgtaaaattaaatgcaaa 180  Q
    ||||||||| |||||||||||||||||||| ||| |||| |   ||||||||||||||| ||| |||  |||||||| |||| |||||||||||||||||    
T  30012157 ttctttgtcccaaaatataagcaaaaaagatcaacttttattctattattatgttttttaaaaaaaaaatcatcttt-ccaaagtaaaattaaatgcaaa 30012059  T
Q  181 ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||||| ||||    
T  30012058 ttgcattcaatttgttct--tttttattttctccataataattaaccaatgataatt 30012004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 5222509 - 5222370
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt-----caaacaaatcatcttttccaatgtaaaat 170  Q
    |||||| |||||||||  |||||||||| |||||||||||| |||| |   |||||||||||||||      ||| ||||||| |||||||| |||||||    
T  5222509 tctcattttctttgtcctaaaatataagtaaaaaagaccaacttttatactattattatgtttttttaaaaaaaaaaaatcattttttccaaagtaaaat 5222410  T
Q  171 taaatgcaaattgcattcaatttgttctcctttttatttt 210  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  5222409 taaatgcaaattgcattgaatttgttctcctttttatttt 5222370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 23978387 - 23978210
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttt 140  Q
    ||||||||||||| |||| |||||||        ||||| |||||| || |||| ||||||| ||||||||||| |||| |   |||  |||||||||||    
T  23978387 tactccctccgtcctaaattataagcaaaaaaaactcattttctttatcccaaattataagcgaaaaagaccaacttttatcatatttaattatgttttt 23978288  T
Q  141 tcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||| |||| ||||||||||| | ||||||||||||||| ||||||||||||| |||| |||| |||||||| |||||    
T  23978287 tcaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataat 23978210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 5234162 - 5234059
Alignment:
Q  127 attattatgttttttcaaacaaa-tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaa 225  Q
    ||||||||||||||||||| ||| | |||||||  ||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||    
T  5234162 attattatgttttttcaaaaaaaattatctttttaaaa-taaaattaaatgtaaattgcattcaatttattctcctttttattttctccataataattaa 5234064  T
Q  226 ccaat 230  Q
    |||||    
T  5234063 ccaat 5234059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 219
Target Start/End: Original strand, 37911798 - 37911941
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| ||||||||| |||| |||||| ||||||||| || |||| |   |||  |||||||||||||||| | || ||||||||||| | |||||||||    
T  37911798 ctcattttctttgtcccaaattataagtaaaaaagactaaattttatcatatttaattatgttttttcaaa-atattatcttttccaaaggaaaattaaa 37911896  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||| |||||| |||||| |||| ||||||||||||| |||||    
T  37911897 tgcaaagtgcattgaatttgctctcttttttattttctctataat 37911941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 40553738 - 40553839
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 229  Q
    |||||||| ||| ||| |||||||||||||||| |  ||||||||||||||||||||||| |||  ||||||||| | ||||||||||| |  |||||||    
T  40553738 attatgttatttaaaa-aaatcatcttttccaaagagaaattaaatgcaaattgcattcattttactctccttttcactttctccataactaataaccaa 40553836  T
Q  230 tga 232  Q
    |||    
T  40553837 tga 40553839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 218
Target Start/End: Complemental strand, 47516423 - 47516287
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 180  Q
    ||||||||| |||| ||||||||||||||||||| |||| |  ||||  |||||||| ||||||| |||| ||||||||||| | |||||||||| ||||    
T  47516423 ttctttgtcccaaattataagcaaaaaagaccaacttttattacatttaattatgttgtttcaaa-aaattatcttttccaaaggaaaattaaatacaaa 47516325  T
Q  181 ttgcattcaatttgttctcctttttattttctccataa 218  Q
     ||||||  ||||| ||||  ||| |||||||| ||||    
T  47516324 gtgcatttgatttgctctctctttcattttctcaataa 47516287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 17799299 - 17799230
Alignment:
Q  149 atcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    |||||||||||||| || ||| ||||||||||||||||| |||||||||||| | | |||||||||||||    
T  17799299 atcatcttttccaaagtgaaactaaatgcaaattgcatttaatttgttctccctctcattttctccataa 17799230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 8013327 - 8013190
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| ||||||||| |||| |||||| |||||||||||| |||| |   |||  ||||| |||||||||| |||| |||||||||||   |||||||||    
T  8013327 ctcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattttttcaaa-aaattatcttttccaagtaaaaattaaa 8013229  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctc 213  Q
    ||||| ||||||||| | |||||||  ||| ||||||||    
T  8013228 tgcaatttgcattcattatgttctctctttcattttctc 8013190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 121
Target Start/End: Original strand, 47806809 - 47806852
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaattttt 121  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  47806809 tcatattctttgtctcaaaatataagcaaaaaagatcaattttt 47806852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 38140896 - 38140826
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcc 200  Q
    |||||||| ||||||| ||||||||||||||||  | |||||||||| |||||||||| | ||||||||||    
T  38140896 attatgttatttcaaaaaaatcatcttttccaaaatgaaattaaatgaaaattgcatttagtttgttctcc 38140826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 46070753 - 46070641
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaa-gaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 179  Q
    ||||||||| |||| ||||||||||||| ||||||||||| |   |||  |||||||| ||| ||| |||| ||||||||||| | ||||||||||||||    
T  46070753 ttctttgtcccaaattataagcaaaaaaagaccaatttttatcatatttaattatgttgtttgaaa-aaattatcttttccaaaggaaaattaaatgcaa 46070655  T
Q  180 attgcattcaattt 193  Q
    | ||||||||||||    
T  46070654 agtgcattcaattt 46070641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 17236446 - 17236342
Alignment:
Q  94 aaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaa--tcatcttttccaatgtaaaattaaatgcaaattgcattcaat 191  Q
    |||||||||| |||| |||| ||||||| ||| ||||||||  || || ||| |||  |||| ||||| ||  |||||||||||||||||||||||||||    
T  17236446 aaaatataagtaaaatagacaaatttttatgttattattattcttatttaaaaaaaaatcattttttctaaaataaaattaaatgcaaattgcattcaat 17236347  T
Q  192 ttgtt 196  Q
    |||||    
T  17236346 ttgtt 17236342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 28142804 - 28142717
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| |||| ||||||||||| | |||||||||||||||  ||||| |||||| |||| |||| |||||||| |||||    
T  28142804 attatgttttttcaaa-aaattatcttttccaaaggaaaattaaatgcaaa-agcatttaatttgctctctttttcattttctctataat 28142717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 32410321 - 32410386
Alignment:
Q  155 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatt 220  Q
    |||||||| | ||||||||||||||| || |||||||||| |||| ||||||||||||| ||||||    
T  32410321 ttttccaaaggaaaattaaatgcaaagtgtattcaatttgctctcttttttattttctctataatt 32410386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 53848381 - 53848499
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| ||||||||| |||| |||||| |||||||||||| |||| |   |||  ||||| || ||||||| |||||||||||| ||| | |||| ||||    
T  53848381 ctcatcttctttgtcccaaattataagtaaaaaagaccaacttttatcaaatttaattatattgtttcaaa-aaatcatctttttcaaagaaaaaataaa 53848479  T
Q  175 tgcaaattgcattcaatttg 194  Q
    |||||| |||||||||||||    
T  53848480 tgcaaagtgcattcaatttg 53848499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 28318600 - 28318538
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 193  Q
    |||||||||||||||| |||| ||||||||||| | ||||||||||| ||| ||||||||||||    
T  28318600 attatgttttttcaaa-aaattatcttttccaaaggaaaattaaatgtaaaatgcattcaattt 28318538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 7652182 - 7652121
Alignment:
Q  155 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccat 216  Q
    |||| ||| ||||||||||||| ||||| || |||||||||||||| || ||||||||||||    
T  7652182 tttttcaaagtaaaattaaatgaaaatttcactcaatttgttctccattctattttctccat 7652121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 5064817 - 5064750
Alignment:
Q  152 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||||| ||| | ||||||||||||||| ||||||||||||  |||| |||| |||||||| |||||    
T  5064817 atctttttcaaaggaaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataat 5064750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 8178475 - 8178335
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||| |||||||||||||| |||||| |||||||||||| |||| |   |||  ||||| || ||||||| |||| || ||||| ||   ||||||||||    
T  8178475 tcattttctttgtctcaaattataag-aaaaaagaccaacttttatcatatttaattatattgtttcaaa-aaattatattttctaaaagaaaattaaat 8178378  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    ||||| ||||||||||||| ||||  ||| |||||||| ||||    
T  8178377 gcaaagtgcattcaatttgctctctctttcattttctcaataa 8178335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 40411070 - 40411152
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctc 213  Q
    |||| ||||||| ||| |||| |||||||  || ||||||||||||| ||| ||||||||||||| |||| |||| ||||||||    
T  40411070 attaagtttttttaaaaaaat-atcttttttaaagtaaaattaaatgtaaactgcattcaatttgatctctttttcattttctc 40411152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 17187073 - 17187003
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||||||||||| || |||||||||        ||||| ||||||||| |||||||||||||||||||||    
T  17187073 tactccctccgtcctataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagac 17187003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 112
Target Start/End: Original strand, 26916257 - 26916286
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaaga 112  Q
    ||||||||||||||||||||||||||||||    
T  26916257 ttctttgtctcaaaatataagcaaaaaaga 26916286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 49080261 - 49080306
Alignment:
Q  166 aaaattaaatgcaaattgcattcaatttgttctcctttttattttc 211  Q
    ||||||||||||||| ||||||||||||| |||| |||| ||||||    
T  49080261 aaaattaaatgcaaagtgcattcaatttgatctctttttcattttc 49080306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 16605092 - 16605056
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  16605092 ctcattttctttgtcccaaaatataagcaaaaaagac 16605056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 35311000 - 35310964
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  35311000 ctcattttctttgtcttaaaatataagcaaaaaagac 35310964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 55580562 - 55580598
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  55580562 ctcattttctttgtcccaaaatataagcaaaaaagac 55580598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 30086826 - 30086630
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||||||||||||||||       |||| ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  30086826 tactccctccgtcttaaaatataagcaaaaaaatctcgtattctttgtctcaaaatataagtaaaaaagaccaacttttatgtcattattatgttttttc 30086727  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  30086726 aaacaaatcatcttttccaatgtaaaattaaatacaaattgcattcaatttattctcctttttattttctccataatttttagccaatgagaattat 30086630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 8146291 - 8146095
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||||| |||| ||||||||||||       ||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  8146291 tactcccttcgtcctaaaatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattattatgttttttc 8146192  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  8146191 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcttttttattttctccataatttttaactaatgagaattat 8146095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 42364917 - 42365112
Alignment:
Q  40 tggtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttt 139  Q
    |||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||    |||    
T  42364917 tggtactccctccgtcctaaaatataagcaaaagaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattgtt----ttt 42365012  T
Q  140 ttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42365013 ttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 42365112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 31690898 - 31690702
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||| ||| ||||||||||||       ||||||||| ||||||||||||||||| ||||||||||||| |||| ||  ||||||||||||||||    
T  31690898 tactccctctgtcctaaaatataagcaaaaaaatctcatattttttgtctcaaaatataaacaaaaaagaccaacttttatgctattattatgttttttc 31690799  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31690798 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattat 31690702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 13146610 - 13146806
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||||| ||||||||||| ||||||||||||| |||| ||  ||||||||||||||||    
T  13146610 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtatcaaaatataaacaaaaaagaccaacttttatgctattattatgttttttc 13146709  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  13146710 aaacaaatcatcttttccaatgtaaaattaaatgtaaattgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattat 13146806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 37066501 - 37066305
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       | ||||||||||||||| |||||||||||||||||||| ||||||| ||  |||||||| |||||||    
T  37066501 tactccctccgtcctaaaatataagcaaaaaaatttcatattctttgtcttaaaatataagcaaaaaagactaatttttttgctattattatattttttc 37066402  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37066401 aaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattat 37066305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 20914739 - 20914936
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    ||||||||||||| |||||||||||||         |||| |||||||||| ||||||||||||||||| ||||| |||| ||  ||| |||||||||||    
T  20914739 gtactccctccgttttaaaatataagcaaaaaaaattcattttctttgtcttaaaatataagcaaaaaataccaacttttatgctatttttatgtttttt 20914838  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20914839 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattat 20914936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 8541841 - 8541646
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||| ||||||| ||||||||||||       |||||| || ||||||| |||||||||  |||||||||||| |||| ||| ||||||||||||||||    
T  8541841 tactctctccgtcctaaaatataagcaaaaatatctcatttt-tttgtcttaaaatataacaaaaaaagaccaacttttatgttattattatgttttttc 8541743  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8541742 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattaaatttgttctccattttattttctccataatttttaaccaatgagaattat 8541646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 35462996 - 35462800
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||| |||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  35462996 tactacctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttc 35462897  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||| |||||||| ||||||||||||||||||||||| |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||    
T  35462896 aaacaaaacatctttttcaatgtaaaattaaatgcaaatttcattcaatttattatcctttttattttcttcataatttttaaccaatgagaattat 35462800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 16286362 - 16286165
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    ||||| |||||||| ||||||||||||       |||||| ||||||||||||||||||||| ||||||||| || |||| ||  ||| |||||||||||    
T  16286362 gtacttcctccgtcctaaaatataagcaaacaaatctcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgcaatttttatgtttttt 16286263  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16286262 caaacaaattatctttttcaatgtaaaattaaatgcaagttgcatttagtttgttctcctttttattttctccataatttttaaccaatgagaattat 16286165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 12638771 - 12638966
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||| |||||| ||||||||||||       ||||||||| ||| |||||||||||||| ||||||||| || |||| ||  ||||||||||||||||    
T  12638771 tactccttccgtcctaaaatataagcaaaaaaatctcatattatttatctcaaaatataag-aaaaaagactaacttttatgctattattatgttttttc 12638869  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||| || |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12638870 aaacaaattatttttttcaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattat 12638966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 84 - 239
Target Start/End: Complemental strand, 24432637 - 24432482
Alignment:
Q  84 tctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattg 183  Q
    ||||||||||||||||||||||||||| ||||| |||| |   ||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||    
T  24432637 tctttgtctcaaaatataagcaaaaaaaaccaacttttatactatttttatattttttcaaataaatcatcttttccaatgtaaaattaaatgcaagttg 24432538  T
Q  184 cattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24432537 catttaatttgttatcctttttattttctccataatttttaaccaatgagaattat 24432482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 25962730 - 25962530
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||| |||||||||||||||||||       | |||| |||||||||||||||||||||||||||| || || |||| ||  ||| ||||||||||||    
T  25962730 tactccttccgtcttaaaatataagcaaaaatatatcattttctttgtctcaaaatataagcaaaaaatacaaacttttatgctatttttatgttttttc 25962631  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgca----aattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatta 238  Q
    |||||||||||||||| |||||||||||||||||||    | ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25962630 aaacaaatcatctttttcaatgtaaaattaaatgcaagtcatttgcatttaatttgttctactttttattttctccataatttttaaccaatgagaatta 25962531  T
Q  239 t 239  Q
    |    
T  25962530 t 25962530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 94 - 239
Target Start/End: Complemental strand, 31317028 - 31316883
Alignment:
Q  94 aaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 193  Q
    ||||||||||||||||||| ||| |||| ||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| |    
T  31317028 aaaatataagcaaaaaagatcaacttttatgttatttttatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaagttgcatttaatct 31316929  T
Q  194 gttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  31316928 gttcacctttttattttctccataatttttaaccaatgagaattat 31316883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 239
Target Start/End: Complemental strand, 17825425 - 17825280
Alignment:
Q  93 caaaatataag-caaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaat 191  Q
    ||||||||||| |||||||||| ||||||| ||  | ||||||  ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||    
T  17825425 caaaatataaggcaaaaaagacaaatttttatgctaatattat--tttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattacattcaat 17825328  T
Q  192 ttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  17825327 ttgtcctcctttttattttctccataatttttaaccaatgagaattat 17825280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 78 - 237
Target Start/End: Original strand, 24439488 - 24439647
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaa-acaaatcatcttttccaatgtaaaattaaatg 176  Q
    |||| ||||||||| |||||||||||||||||||| ||| |||| ||| |||||||||||||||||| | ||||||||||| |||| |||||||||||||    
T  24439488 tcattttctttgtcgcaaaatataagcaaaaaagatcaacttttatgttattattatgttttttcaacaaaaatcatcttt-ccaaagtaaaattaaatg 24439586  T
Q  177 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    |||||||||||||||||||||||||||||||||| ||||||||  ||| ||||||| ||||    
T  24439587 caaattgcattcaatttgttctcctttttattttttccataataattagccaatgataatt 24439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 8143858 - 8144009
Alignment:
Q  86 tttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgca 185  Q
    |||||| || ||||||||||||||||| ||| |||| ||  ||||||||||||||||||| ||||| |||||| ||| ||||||||||||  ||||||||    
T  8143858 tttgtcccataatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcttctttttcaaagtaaaattaaatataaattgca 8143957  T
Q  186 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    ||||||||||||| | ||||||||||||||||||  ||||||||||||||||    
T  8143958 ttcaatttgttctacattttattttctccataatcattaaccaatgagaatt 8144009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 2002323 - 2002217
Alignment:
Q  131 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 230  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||  |||||||||    
T  2002323 ttatgttatttcaaaaaaatcatcttttccaaaataaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaat 2002224  T
Q  231 gagaatt 237  Q
     ||||||    
T  2002223 aagaatt 2002217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 20452668 - 20452543
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaa-gaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||||||| ||||| |||||||||||| |||||| || |||||||| ||   ||||||| |||||||||| || |||||| || || ||||||||||||    
T  20452668 tctcatattgtttgtttcaaaatataagtaaaaaaagatcaatttttatgctgttattatattttttcaaataattcatctctttcattgtaaaattaaa 20452569  T
Q  175 tgcaaattgcattcaatttgttctcc 200  Q
    || |||||| ||||||||||||||||    
T  20452568 tgtaaattgtattcaatttgttctcc 20452543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 28906984 - 28907122
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| |||||| || |||| ||||||||||||||||||| | || |   |||  |||||||||| ||||| |||| ||||||| ||||  |||||||||    
T  28906984 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 28907082  T
Q  175 tgcaaattgcattcaatttgttctccttttt-attttctc 213  Q
    |||||| |||||||||||||||||| ||||| ||||||||    
T  28907083 tgcaaagtgcattcaatttgttctcttttttcattttctc 28907122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 28943379 - 28943517
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| |||||| || |||| ||||||||||||||||||| | || |   |||  |||||||||| ||||| |||| ||||||| ||||  |||||||||    
T  28943379 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 28943477  T
Q  175 tgcaaattgcattcaatttgttctccttttt-attttctc 213  Q
    |||||| |||||||||||||||||| ||||| ||||||||    
T  28943478 tgcaaagtgcattcaatttgttctcttttttcattttctc 28943517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 3464006 - 3463917
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||| ||| |||| || ||||||||   ||||||||||||||| ||||||||||||| |||| |||| |||||||| |||||    
T  3464006 attatgtttttttaaaaaaattattttttccaagaaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataat 3463917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 8506353 - 8506471
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| |||||| || |||| |||||| |||||||| ||| ||||||   |||  |||||||| ||||||| |||| ||||||||||| | |||||||||    
T  8506353 ctcattttctttctcccaaattataagtaaaaaagatcaacttttgtcatatttaattatgttgtttcaaa-aaattatcttttccaaagaaaaattaaa 8506451  T
Q  175 tgcaaattgcattcaatttg 194  Q
    |||||| |||||||||||||    
T  8506452 tgcaaagtgcattcaatttg 8506471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 8959577 - 8959699
Alignment:
Q  98 tataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgt 195  Q
    ||||||||||||||||||| |||| |   |||  |||||||||||||||| |||| ||||||||||| | ||||||||||| ||| ||| |||||||||     
T  8959577 tataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaagaaaaattaaatgtaaagtgcgttcaatttgc 8959675  T
Q  196 tctcctttttattttctccataat 219  Q
    |||| |||  |||||||| |||||    
T  8959676 tctcttttccattttctctataat 8959699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 32433570 - 32433614
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaattttt 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  32433570 ctcatattctttgtctcaaaatataagcaaaaaagacaaattttt 32433614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 16153535 - 16153447
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| |||| ||||||||||| | |||||||||| |||| |||||| |||||| |||| |||| | |||||| |||||    
T  16153535 attatgttttttcaaa-aaattatcttttccaaaggaaaattaaatacaaagtgcatttaatttgctctctttttcactttctctataat 16153447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 1144680 - 1144624
Alignment:
Q  137 tttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 194  Q
    ||||||||| |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  1144680 tttttcaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 1144624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 10154118 - 10154055
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 194  Q
    |||||||| ||||||| |||| |||| |||||| | ||||||||||||||| |||||||||||||    
T  10154118 attatgttgtttcaaa-aaattatctcttccaaagaaaaattaaatgcaaagtgcattcaatttg 10154055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 35275415 - 35275346
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcc 200  Q
    |||||||||||||||| |||||||||||| |||    |||||||||||||| | |||||||||| ||||||    
T  35275415 attatgttttttcaaa-aaatcatctttttcaaaaagaaattaaatgcaaactacattcaattttttctcc 35275346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 42273654 - 42273705
Alignment:
Q  165 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    ||||||||||||||||||||||||||||  |||||  ||| |||||||||||||    
T  42273654 taaaattaaatgcaaattgcattcaatt--ttctctctttcattttctccataa 42273705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 446043 - 445990
Alignment:
Q  167 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatt 220  Q
    |||||||||| |||||||||||||||| |||||  ||| ||||||||| |||||    
T  446043 aaattaaatgaaaattgcattcaattttttctctctttcattttctccgtaatt 445990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 8146696 - 8146781
Alignment:
Q  133 atgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    ||||| ||||||| ||||||| |||| |||  | |||||||||||||||| || | |||||| ||||| | | |||||||||||||    
T  8146696 atgttatttcaaaaaaatcatttttttcaaaatgaaattaaatgcaaattacaattaatttgctctccctctcattttctccataa 8146781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 15006450 - 15006413
Alignment:
Q  165 taaaattaaatgcaaattgcattcaatttgttctcctt 202  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  15006450 taaaattaaatacaaattgcattcaatttgttatcctt 15006413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 9957680 - 9957644
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  9957680 ctcattttctttgtcccaaaatataagcaaaaaagac 9957644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 42273546 - 42273582
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  42273546 ctcattttctttgtcccaaaatataagcaaaaaagac 42273582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 48 - 239
Target Start/End: Original strand, 31126097 - 31126288
Alignment:
Q  48 cctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaaca 147  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||||||||    
T  31126097 cctccgtcttaaaatataagcaaaaaaatctcatattctttgtctcaaaatataaacaaaaaagaccaacttttatgccattattatgttttttcaaaca 31126196  T
Q  148 aatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31126197 aatcattttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattat 31126288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 1334990 - 1335186
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||| ||| ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  1334990 tactccctctgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgttattattatgttttttc 1335089  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  1335090 aaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaataaaaattat 1335186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 21654123 - 21654321
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttt-t 140  Q
    |||||||||| ||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| |    
T  21654123 gtactccctctgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgtttttt 21654222  T
Q  141 tcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  21654223 tcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaacaaatgaaaattat 21654321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 23513447 - 23513643
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||| ||||| |||| ||  ||||||||||||||||    
T  23513447 tactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaataccaacttttatgctattattatgttttttc 23513546  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23513547 aaacaaaacatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattat 23513643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 26641352 - 26641156
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||| ||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||| ||||| |||| ||  ||||||||||||||||    
T  26641352 tactctctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaacaccaacttttatgctattattatgttttttc 26641253  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26641252 aaacaaatcatctttttcaaggtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 26641156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 55400618 - 55400814
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       | ||||||||||||||||||||||||||||||||||||  | |||| ||  ||||||||||||||||    
T  55400618 tactccctccgtcctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagcaaaaaagacttacttttatgctattattatgttttttc 55400717  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  55400718 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaatgagaattat 55400814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 37324328 - 37324128
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt- 141  Q
    |||||| |||||||||||||||||||       || |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||     
T  37324328 tactccatccgtcttaaaatataagcaaaaaaatcacatattctttgtcttaaaatataagcaaaaaagaccaacttttatgtcattattatgttttttt 37324229  T
Q  142 ---caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatta 238  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37324228 tttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgtttccctttttattttctccataatttttaaccaatgagaatta 37324129  T
Q  239 t 239  Q
    |    
T  37324128 t 37324128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 46580414 - 46580612
Alignment:
Q  43 tactccctccgt--cttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttt 140  Q
    ||||||||||||  ||||||||||||||       | |||||||||||||||||||||||||| |||||||||||| |||| || |||||||||||||||    
T  46580414 tactccctccgtgtcttaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagtaaaaaagaccaacttttatgccattattatgttttt 46580513  T
Q  141 tcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46580514 tcaaacaaatcatattttacaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaatcaatgagaattat 46580612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 53020095 - 53020259
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttt-ttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||||||| |||||||||||||||||| |||||| ||||| |||| ||  ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  53020095 tctcatattttttgtctcaaaatataagtaaaaaataccaacttttatgctattattatgtttttttcaaacaaatcatctttttcaatgtaaaattaaa 53020194  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  53020195 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaactaatgagaattat 53020259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 51426530 - 51426695
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttt--ttcaaacaaatcatcttttccaatgtaaaattaa 173  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||| |||||||||  |||||||||||||||||||| |||||||||||||    
T  51426530 tctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattcttatgttttttttcaaacaaatcatcttttctaatgtaaaattaa 51426629  T
Q  174 atgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  51426630 atgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattat 51426695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 80 - 229
Target Start/End: Original strand, 13541194 - 13541343
Alignment:
Q  80 atattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 179  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13541194 atattctttgtctcaaaatataagaaaaaaagaccaacttttatgttattattatgttttttcgaacaaatcatcttttccaatgtaaaattaaatgcaa 13541293  T
Q  180 attgcattcaatttgttctcctttttattttctccataatttttaaccaa 229  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  13541294 attgcattcaatgtgttttcctttttattttctctataatttttaaccaa 13541343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 45781276 - 45781473
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnn-tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||||| ||| |||| ||  ||| |||||||||||    
T  45781276 tactccctccgtcttaaaatataagaaaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgtttttt 45781375  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  45781376 caaacaaatcatcttttccaatgtaaaattaaattcaagttgcatttaatttgttctcatttttatcttctccataatttttaaccaatgagaattat 45781473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 28793084 - 28793238
Alignment:
Q  86 tttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaa-ttaaatgcaaattgc 184  Q
    ||||||||||||||||||||||||||||||| |||| ||  ||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  28793084 tttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttctaatgtaaaaattaaatgcaagttgc 28793183  T
Q  185 attcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28793184 atttaatttgttctcctttttattttctccataatttttaaccaatgagaattat 28793238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 94 - 239
Target Start/End: Complemental strand, 46296266 - 46296121
Alignment:
Q  94 aaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 193  Q
    ||||||||||||||||||| ||| |||| ||  ||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  46296266 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccgatgtaaaattaaatgcaagttgcatttaattt 46296167  T
Q  194 gttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  46296166 gttctcctttttattttctccataatttttaaccaatgagaattat 46296121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 51255108 - 51255262
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaatt 182  Q
    ||||||||||||||||||||| |||||||| ||| |||| ||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  51255108 ttctttgtctcaaaatataagtaaaaaagatcaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatctaaaattaaatgcaagtt 51255205  T
Q  183 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  51255206 gcatttaatttgttctcctttttattttctccataatttttaactaatgagaattat 51255262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 16739355 - 16739204
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaatt 182  Q
    |||||||||||||||||||||||||||||||||| |||| ||  |||||||| ||||||||||||||||||||||||||||||||||||||||     ||    
T  16739355 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatcttttccaatgtaaaattaaat-----tt 16739261  T
Q  183 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16739260 gcatttaatttgttttcctttttattttctccataatttttaaccaatgagaattat 16739204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 32322480 - 32322283
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    ||||||||||  || ||||||||||||       |||||| ||||||||||||||||||||| ||||||||| |  |||| ||  ||| |||||||||||    
T  32322480 gtactccctctctcctaaaatataagcaaataaatctcattttctttgtctcaaaatataagtaaaaaagactagattttatgctatttttatgtttttt 32322381  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||| ||||||| |||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32322380 caaacaaattatctttttcaatgtaaaattaaatacaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattat 32322283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 43575837 - 43576033
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    ||||||| |||||| ||||||||||||       |||| | || ||||||||||||||||||||||||||| ||| |||| ||  ||| ||||||||| |    
T  43575837 gtactccatccgtcctaaaatataagcaaaaaaatctctttttttttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgtttt-t 43575935  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  43575936 caaacaaatcatcttttctaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgataattat 43576033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 90 - 236
Target Start/End: Complemental strand, 52172204 - 52172057
Alignment:
Q  90 tctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt-caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattc 188  Q
    |||||||||||||||||||||||  ||||||| ||  ||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||     
T  52172204 tctcaaaatataagcaaaaaagattaatttttatgctatttttatgtttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaagttgcattt 52172105  T
Q  189 aatttgttctcctttttattttctccataatttttaaccaatgagaat 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52172104 aatttgttctcctttttattttctccataatttttaaccaatgagaat 52172057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 49068018 - 49068127
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 229  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49068018 attatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaa 49068117  T
Q  230 tgagaattat 239  Q
    ||||||||||    
T  49068118 tgagaattat 49068127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 46819930 - 46820103
Alignment:
Q  44 actccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttca 143  Q
    |||||||||||| ||||||||||||       |||||| ||||||||||||||||||||  |||||||| ||| |||| ||  ||| ||||||||||| |    
T  46819930 actccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataaataaaaaagatcaacttttatgctatttttatgttttttta 46820029  T
Q  144 aacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccata 217  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  46820030 aacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccata 46820103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 36189246 - 36189052
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| |||| |||||||       || ||| ||||||||| |||||||||||||||||||||||  |||| ||| ||||||||||||||||    
T  36189246 tactccctccgtcctaaattataagcaaaaaaatcacattttctttgtc-caaaatataagcaaaaaagaccatcttttatgttattattatgttttttc 36189148  T
Q  143 a-aacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    | || ||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | || |||  ||||||||||||||||    
T  36189147 acaaaaaatcttcttttccaaagtaaaattaaatgcaaattgcattcaatttgttcacctttttattttattcacaatcattaaccaatgagaatt 36189052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 131 - 239
Target Start/End: Original strand, 52252004 - 52252112
Alignment:
Q  131 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  52252004 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttacatttaatttgttctcttttttattttctccataatttttaatcaat 52252103  T
Q  231 gagaattat 239  Q
    |||||||||    
T  52252104 gagaattat 52252112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 34022501 - 34022622
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    |||||| |||||| ||||||||||||       |||||| |||||||||||||||||||||||||||| |||| ||||| ||  ||| ||||||||||||    
T  34022501 tactccatccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaaaaccattttttatgctatttttatgttttttc 34022600  T
Q  143 aaacaaatcatcttttccaatg 164  Q
    ||||||||||||||||||||||    
T  34022601 aaacaaatcatcttttccaatg 34022622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 219
Target Start/End: Original strand, 21214121 - 21214298
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttt 140  Q
    |||||||||||||||||| |||||||        ||||| ||||||||| |||| ||||||||||||||| ||| |||| |  ||||  |||||||||||    
T  21214121 tactccctccgtcttaaattataagcaaaaaaaactcattttctttgtcccaaattataagcaaaaaagatcaacttttatcacatttaattatgttttt 21214220  T
Q  141 tcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||| | || |||||||||||   ||||||||||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  21214221 tcaaa-atattatcttttccaaatgaaaattaaatgcaaagtgcattcaatttgctctcttttttattttctcaataat 21214298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 219
Target Start/End: Complemental strand, 22456212 - 22456069
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| |||||| || |||| ||||||||||||||||||| |||| |   |||  |||||||||||||||| |||| ||||||||||| | |||||||||    
T  22456212 ctcattttctttatcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaa 22456114  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||| ||||||||||||| |||| |||| |||||||| |||||    
T  22456113 tgcaaaatgcattcaatttgctctctttttcattttctctataat 22456069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 78 - 219
Target Start/End: Complemental strand, 22479257 - 22479115
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||| ||||||||| |||| |||||||||||||||| || |||| |   |||  |||||||||||||||| |||| ||||||||||| | ||||||||||    
T  22479257 tcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaat 22479159  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||| ||||||||||||| |||| |||| |||||||| |||||    
T  22479158 gcaaagtgcattcaatttgctctctttttcattttctctataat 22479115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 45347815 - 45347757
Alignment:
Q  181 ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45347815 ttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattat 45347757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 23209484 - 23209347
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| |||||||||| ||| ||||||||||||||||||| |||| |   |||  |||||||| ||||||| ||||||||||| |||| |  ||||||||    
T  23209484 ctcattttctttgtcttaaattataagcaaaaaagaccaacttttatcatatttaattatgttatttcaaa-aaatcatctttcccaaagagaaattaaa 23209386  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctc 213  Q
    ||||||||||||||| | |||||||| ||| ||||||||    
T  23209385 tgcaaattgcattcattatgttctccctttcattttctc 23209347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 51309397 - 51309487
Alignment:
Q  147 aaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||  ||||||||| ||||||    
T  51309397 aaataatcttttctaaattaaaattaaatgcaaattgcattcaatttgttcccctttctattctctccataatcattaaccaataagaatt 51309487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 2994567 - 2994479
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| |||| ||||||||||| | ||||||||||||||| ||||||||||||| |||| |||| |||||||| |||||    
T  2994567 attatgttttttcaaa-aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataat 2994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 219
Target Start/End: Original strand, 10251926 - 10252068
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||| |||||||||||||| ||||||||||||| ||||| |||| |   |||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  10251926 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 10252024  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||| ||||||||||||| |||  |||| |||||||| |||||    
T  10252025 gcaaagtgcattcaatttgctctatttttcattttctctataat 10252068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 34022625 - 34022675
Alignment:
Q  189 aatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34022625 aatttgttctcctttttattttctctataatttttaaccaatgagaattat 34022675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 49066993 - 49067071
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaattttt 121  Q
    ||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||| ||| ||||    
T  49066993 tactccctccgtcttaaaatataagcaaaaaattatcatattctttgtctcaaaatataagcaaaaaagatcaactttt 49067071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 47444125 - 47444034
Alignment:
Q  127 attattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||| |||||||||||||| |||| ||||||||||| | ||||||||||||||| ||||||||||||| | || |||| |||||||| |||||    
T  47444125 attactatgttttttcaaa-aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataat 47444034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 49583890 - 49584016
Alignment:
Q  88 tgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgca 185  Q
    |||| |||| ||||||||||||||||||| |||| |   |||  |||||||||||||||| |||| ||||||||||| | ||||||||||| ||| ||||    
T  49583890 tgtcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaagaaaaattaaatgtaaagtgca 49583988  T
Q  186 ttcaatttgttctcctttttattttctc 213  Q
    ||||||||| |||  |||| ||||||||    
T  49583989 ttcaatttgctctgtttttcattttctc 49584016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 38401294 - 38401438
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| ||||||||| |||| ||||||||||||||| ||| |||| |   |||  |||||||||||||||| |||| |||||||||||   |||||||||    
T  38401294 ctcattttctttgtcccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaa-aaataatcttttccaaaagaaaattaaa 38401392  T
Q  175 tgcaaattgcattcaatttgttctcctttttattttctccataatt 220  Q
    |||||| | |||| |||||  |||| |||| |||||||| ||||||    
T  38401393 tgcaaagtacatttaattttctctctttttcattttctctataatt 38401438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 45347908 - 45347830
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaattttt 121  Q
    ||||||||||||| ||||||||||||       |||||| |||||||||||||||||||||||||||||| ||| ||||    
T  45347908 tactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaactttt 45347830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 219
Target Start/End: Original strand, 10114827 - 10114968
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||| |||||||||||||| ||||||||||||| || || |||| |   |||  ||||||||||||||| || || ||||||||||| | |||||||||     
T  10114827 tcattttctttgtctcaaattataagcaaaaaatac-aacttttatcatatttaattatgttttttcaa-cagattatcttttccaaaggaaaattaaaa 10114924  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||| ||||||||||||| |||  |||| |||||||| |||||    
T  10114925 gcaaagtgcattcaatttgctctatttttcattttctctataat 10114968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 30454873 - 30454786
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    |||||||| ||||||| |||| ||||||||||| | ||||||||||||||| ||||||||||||| ||||  ||| |||||||| ||||    
T  30454873 attatgttgtttcaaa-aaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataa 30454786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 46303534 - 46303618
Alignment:
Q  153 tcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 237  Q
    ||||||| || | |||||||||||||||||||||| |||||||| | |||  |||||||||||||||  ||||||||| ||||||    
T  46303534 tcttttctaaagaaaaattaaatgcaaattgcatttaatttgttattcttcctattttctccataatcattaaccaataagaatt 46303618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 48291791 - 48291870
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttatttt 210  Q
    |||||||||||||||| |||| ||||||||||| | ||||||||||| ||| ||||||||||||| |||| |||| |||||    
T  48291791 attatgttttttcaaa-aaattatcttttccaaaggaaaattaaatggaaagtgcattcaatttgctctctttttcatttt 48291870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 7886766 - 7886660
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 229  Q
    |||||||| ||| ||| |||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||  ||| |||||||| |||| |  |||||||    
T  7886766 attatgttgttttaaa-aaatcatcttttccaaagaaaaatcaaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaa 7886668  T
Q  230 tgagaatt 237  Q
    ||| ||||    
T  7886667 tgaaaatt 7886660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 34105500 - 34105611
Alignment:
Q  131 ttatgttttttcaaacaaatcatcttttccaatgta-----aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaa 225  Q
    ||||||| ||||||| ||||||||||||| || |||     |||||||||| |||||||||| |||||||||| |||| |||| ||| ||||||  ||||    
T  34105500 ttatgttatttcaaaaaaatcatcttttcaaaagtaaaattaaattaaatgtaaattgcattgaatttgttctgctttctattctcttcataatcattaa 34105599  T
Q  226 ccaatgagaatt 237  Q
    ||||| ||||||    
T  34105600 ccaataagaatt 34105611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 218
Target Start/End: Original strand, 34194808 - 34194944
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt----attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgca 178  Q
    ||||||||| || | ||||||||||||||||||| |||| |  ||||    |||||||| ||||||| |||| ||||||||||| | |||||||||||||    
T  34194808 ttctttgtcccagattataagcaaaaaagaccaacttttat--catttttaattatgttgtttcaaa-aaattatcttttccaaaggaaaattaaatgca 34194904  T
Q  179 aattgcattcaatttgttctcctttttattttctccataa 218  Q
    || |||||||| |||| ||||  ||| |||||||| ||||    
T  34194905 aagtgcattcagtttgctctctctttcattttctcaataa 34194944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 54725806 - 54725665
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    |||| ||||||||| |||| ||||||||||||||| | | |||| |   |||  ||||| |||||||||| |||| ||||||| |||   ||||||||||    
T  54725806 tcattttctttgtcccaaattataagcaaaaaagatctacttttatcatatttaattatattttttcaaa-aaattatctttttcaaaagaaaattaaat 54725708  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
     |||| ||||||||||||| |||| ||||||||||||| ||||    
T  54725707 acaaagtgcattcaatttgctctcttttttattttctcaataa 54725665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 10014238 - 10014326
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| | || ||||||||||| | ||||||||| ||||| ||||||||||||  |||  ||||||||||||| |||||    
T  10014238 attatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctattttttattttctctataat 10014326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 25242292 - 25242239
Alignment:
Q  166 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||| |||||    
T  25242292 aaaattaaacgcaaagtgcattcaatttgttctcttttttattttctctataat 25242239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 29676596 - 29676514
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctc 213  Q
    |||||||||||||||| |||| ||||||||||| | |||||||||| |||| |||||||||| || | || |||| ||||||||    
T  29676596 attatgttttttcaaa-aaattatcttttccaaaggaaaattaaattcaaagtgcattcaatatgctttctttttcattttctc 29676514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 8097164 - 8097059
Alignment:
Q  133 atgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatga 232  Q
    ||||| ||||||| |||| || |||||||| | ||||||||||||||| ||||||||||||| ||||  ||| |||||||| ||||    ||||||||||    
T  8097164 atgttgtttcaaa-aaattattttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatga 8097066  T
Q  233 gaattat 239  Q
     ||||||    
T  8097065 aaattat 8097059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 33974817 - 33974746
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||||| |||||| || |||||||||       |||||| |||||||||||||||||||||||||||||||    
T  33974817 gtactccatccgtcctataatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagac 33974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 50651152 - 50651099
Alignment:
Q  165 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    |||||||||||||||||| ||||||||||  ||||  |||||||||||||||||    
T  50651152 taaaattaaatgcaaattacattcaattttctctctcttttattttctccataa 50651099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 7615070 - 7615008
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 193  Q
    |||||||| ||||||| |||||||||||| ||| | |||| ||||||||| |||||||||||||    
T  7615070 attatgttatttcaaa-aaatcatctttttcaaaggaaaactaaatgcaacttgcattcaattt 7615008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 20847383 - 20847329
Alignment:
Q  165 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||||| |||||||||| | |||  ||| ||||||||||||||    
T  20847383 taaaattaaatgcaaattacattcaatttttcctctctttcattttctccataat 20847329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 35963161 - 35963214
Alignment:
Q  165 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    ||||||||||||||||||||||| |||||  ||||  ||| |||||||||||||    
T  35963161 taaaattaaatgcaaattgcatttaattttctctctctttcattttctccataa 35963214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 50730118 - 50730171
Alignment:
Q  165 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    |||||||||||| ||||| ||||||||||  |||| |||||||||| |||||||    
T  50730118 taaaattaaatgtaaattacattcaattttctctcttttttattttttccataa 50730171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 50782736 - 50782683
Alignment:
Q  165 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    |||||||||||| ||||| ||||||||||  |||| |||||||||| |||||||    
T  50782736 taaaattaaatgtaaattacattcaattttctctcttttttattttttccataa 50782683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 2927189 - 2927225
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  2927189 ctcattttctttgtcttaaaatataagcaaaaaagac 2927225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 3972286 - 3972318
Alignment:
Q  167 aaattaaatgcaaattgcattcaatttgttctc 199  Q
    |||||||||||||||| ||||||||||||||||    
T  3972286 aaattaaatgcaaattacattcaatttgttctc 3972318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 3997592 - 3997560
Alignment:
Q  167 aaattaaatgcaaattgcattcaatttgttctc 199  Q
    |||||||||||||||| ||||||||||||||||    
T  3997592 aaattaaatgcaaattacattcaatttgttctc 3997560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 14752431 - 14752395
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagac 113  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  14752431 ctcattttctttgtcccaaaatataagcaaaaaagac 14752395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 36546480 - 36546520
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgt 123  Q
    ||||||||| ||||||||||||||||||||| || ||||||    
T  36546480 ttctttgtcccaaaatataagcaaaaaagacaaacttttgt 36546520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 36561835 - 36561795
Alignment:
Q  83 ttctttgtctcaaaatataagcaaaaaagaccaatttttgt 123  Q
    ||||||||| ||||||||||||||||||||| || ||||||    
T  36561835 ttctttgtcccaaaatataagcaaaaaagacaaacttttgt 36561795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 8e-76; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 10227791 - 10227987
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||| |    
T  10227791 tactccctccgtcctaaaatataagcaaaaaattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttcc 10227890  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10227891 aaacaaatcatcttttccaatataaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattat 10227987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 44 - 239
Target Start/End: Original strand, 12278586 - 12278781
Alignment:
Q  44 actccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttca 143  Q
    |||||||||||| ||||||||||||       | ||||||||||||||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||    
T  12278586 actccctccgtcctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagcaaaaaagatcaacttttatgttattattatgttttttca 12278685  T
Q  144 aacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12278686 aacaaatcattttttcaaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 12278781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 79 - 239
Target Start/End: Complemental strand, 17722051 - 17721891
Alignment:
Q  79 catattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgca 178  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  17722051 catattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaagaaatcatattttccaatgtaaaattaaatgca 17721952  T
Q  179 aattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17721951 aattgcattcaatttgttctcctttttattttctccataatttttaacaaatgagaattat 17721891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 30766325 - 30766521
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| | ||| |||| ||| ||||||||||||||||    
T  30766325 tactccctccgtcttaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgttattattatgttttttc 30766424  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||| |||| || |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30766425 aaagaaattatttttttcaatgtaaaattaaatgcaaattgcattgaatttgttctcctttttattttctccataatttttaactaatgagaattat 30766521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 373978 - 374174
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       | ||| ||||||| ||||||||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  373978 tactccctccgtcctaaaatataagcaaaaaaatttcaaattctttatctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttc 374077  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  374078 aaacaaatcatattttccgatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctctataatttttaaccaatgaaaattat 374174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 30949014 - 30949210
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||| || ||||||||||||||||||||||||||||||| || |||| ||  ||| ||||||||||||    
T  30949014 tactccctccgtcctaaaatataagcacaaaaatcttattttctttgtctcaaaatataagcaaaaaagactaacttttatgctatttttatgttttttc 30949113  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30949114 aaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctctataatttttaaccaatgagaattat 30949210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 17598171 - 17598368
Alignment:
Q  42 gtactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt 141  Q
    |||||||||||||| |||||||||| |       | |||| || |||||| |||||||||||||||||||||||| || | ||| |||||||||||||||    
T  17598171 gtactccctccgtcctaaaatataaacaaaaaagtttcattttttttgtcccaaaatataagcaaaaaagaccaacttgtatgttattattatgtttttt 17598270  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  17598271 caaacaaatcttcttttccaatgtaaaattaaatgcaaattgcattcaatttattctcttttttattttctccataatttttaaccaatgagaattat 17598368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 33756168 - 33756331
Alignment:
Q  76 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 175  Q
    ||||||||||||| |||||||||||||| |||||| ||||| |||| ||  ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  33756168 tctcatattctttatctcaaaatataagaaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatttttttcaatgtaaaattaaat 33756267  T
Q  176 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  33756268 gcaaattgcattcaatttgtcctccttttcattttctccataatttttaaccaatgagaattat 33756331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 31887400 - 31887203
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgtttttt- 141  Q
    ||||||||||||| ||||||||||||       | |||| |||||||||||||| |||||||| |||||||||| |||| ||  ||| |||||||||||     
T  31887400 tactccctccgtcctaaaatataagcaaaaaaatatcattttctttgtctcaaattataagcataaaagaccaacttttatgctatttttatgttttttt 31887301  T
Q  142 caaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  31887300 caaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcttttttattttctccataatttttaaccaataaaaattat 31887203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 3888362 - 3888484
Alignment:
Q  98 tataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgt 195  Q
    ||||||||||||||||||| |||| |   |||  |||||||||||||||| |||| ||||||| ||| | ||||||||||||||| ||||||||||||||    
T  3888362 tataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatctttttcaaaggaaaattaaatgcaaagtgcattcaatttgt 3888460  T
Q  196 tctcctttttattttctccataat 219  Q
    |||| |||| |||||||| |||||    
T  3888461 tctctttttcattttctctataat 3888484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 208
Target Start/End: Complemental strand, 32882925 - 32882806
Alignment:
Q  78 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 177  Q
    |||| |||||||||  ||||||||||||||||||||||| |||||||| |||           ||||| || ||||||||||||| ||||||||||||||    
T  32882925 tcattttctttgtcctaaaatataagcaaaaaagaccaacttttgtgttatt-----------tcaaaaaagtcatcttttccaaagtaaaattaaatgc 32882837  T
Q  178 aaattgcattcaatttgttctcctttttatt 208  Q
    |||| ||||||||||||||||||||| ||||    
T  32882836 aaatcgcattcaatttgttctcctttctatt 32882806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 219
Target Start/End: Original strand, 4031867 - 4032044
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttt 140  Q
    |||||||||||||||||| ||||||         ||||| |||||| ||||||| |||||||| |||||||||| |||  |   |||  |||||||||||    
T  4031867 tactccctccgtcttaaattataagtaaaaaaaactcattttctttatctcaaattataagcataaaagaccaactttaatcatatttaattatgttttt 4031966  T
Q  141 tcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    || || |||| |||||||| || | ||||||||||||||| ||||||||||||| |||| |||| |||||||| |||||    
T  4031967 tcgaa-aaattatcttttcaaagggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataat 4032044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 16524349 - 16524436
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| |||| || ||||||||   ||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||    
T  16524349 attatgttttttcaaa-aaattattttttccaaaagaaaattaaatgcaaagtgcattcaatttgttct-cttttcattttctctataat 16524436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 5300783 - 5300696
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 218  Q
    |||||||||||||||| |||| |||||||||||   |||||||||| |||| ||||||||||||| |||  ||||||||||||| ||||    
T  5300783 attatgttttttcaaa-aaattatcttttccaaaagaaaattaaatacaaagtgcattcaatttgctcttttttttattttctcaataa 5300696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 4987914 - 4988000
Alignment:
Q  132 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||| ||| |||| ||||||| ||| | ||||||||||||||| ||||||||||||| |||| |||| |||||||| |||||    
T  4987914 tatgtttttttaaa-aaattatctttttcaaaggaaaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataat 4988000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 21963941 - 21964009
Alignment:
Q  147 aaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccat 216  Q
    ||||||||||||  || ||||||||||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  21963941 aaatcatctttttaaa-gtaaaattaaatgtaaatttcatacaatttgttctcttttttattttctccat 21964009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 16655172 - 16655245
Alignment:
Q  138 ttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttct 212  Q
    |||||||| ||||||| |||| |||||  ||||||||||||||||||||||| |||| ||||| ||| |||||||    
T  16655172 ttttcaaa-aaatcatatttttcaatgagaaattaaatgcaaattgcattcattttgctctccctttcattttct 16655245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 5822266 - 5822162
Alignment:
Q  77 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 174  Q
    ||||| |||| |||| |||| ||||| |||||||||| ||||||| |   |||  |||||||||||| ||| |||||||||||||||| |  ||||||||    
T  5822266 ctcattttctctgtcccaaattataaacaaaaaagactaatttttatcatatttaattatgtttttttaaaaaaatcatcttttccaaagagaaattaaa 5822167  T
Q  175 tgcaa 179  Q
    |||||    
T  5822166 tgcaa 5822162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3673493 - 3673536
Alignment:
Q  1 tttggaatatggatatgtactttttaggaaaacccattgtggta 44  Q
    |||||||||||||||||||||||||| |||||| || |||||||    
T  3673493 tttggaatatggatatgtactttttatgaaaactcaatgtggta 3673536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 4510 - 4705
Alignment:
Q  43 tactccctccgtcttaaaatataagcnnnnnnntctcatattctttgtctcaaaatataagcaaaaaagaccaatttttgtgtcattattatgttttttc 142  Q
    ||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||| |    
T  4510 tactccctccgtcctaaaatataagcaaaaaattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttcc 4609  T
Q  143 aaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattat 239  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4610 aaacaaatcatcttt-ccaatataaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattat 4705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 3139 - 3227
Alignment:
Q  130 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 219  Q
    |||||||||||||||| |||| ||||||||||| | ||||||| ||||||| ||||||||||||||| || |||| |||||||| |||||    
T  3139 attatgttttttcaaa-aaattatcttttccaaagcaaaattatatgcaaagtgcattcaatttgttttctttttcattttctctataat 3227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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