View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4891-Insertion-10 (Length: 362)
Name: NF4891-Insertion-10
Description: NF4891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4891-Insertion-10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 8 - 362
Target Start/End: Original strand, 33926174 - 33926530
Alignment:
| Q |
8 |
aaagccgctgcaataaatattgtcttaaagtcaaggtaggctatccacaaatttaacatcaaattattgctcttaagagcctcttattattgatctgaat |
107 |
Q |
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| T |
33926174 |
aaagccgctgcaataaatattgtcttaaagtcaaggtaggctatccacaaatttaacatcaaattattgctcttaagagcctcttattattgatctgaat |
33926273 |
T |
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| Q |
108 |
aactttaaatttcattgtttacgtagcattattatgacctactcaatttatctcctagtacctcagttttaaaatatcgggttttctaacttgtgtgtaa |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
33926274 |
aactttaaatttcattgtttacgtagcattattatgacctactcaatttatctcctagtacctcagttttaaaatatcgggttttctaact--tgtgtaa |
33926371 |
T |
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| Q |
208 |
aaatgttac----acattaaaaattatttactcaagttttatttactaaagtatacctagcactattgttaatttaatagagtttattattagattaaaa |
303 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
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| T |
33926372 |
aaatgttacatgtacattaaaaattatttactcaagttttatttactaaagtatacctagtactattgttaatttaatagagtttattattagagtaaaa |
33926471 |
T |
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| Q |
304 |
catagcctagtaccttatcttaattcttaattaagataacatatgttcatcatggcgta |
362 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33926472 |
catagcctagtaccttatcttaattcttaattaagataacatatgttcatcatggcgta |
33926530 |
T |
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