View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4891-Insertion-3 (Length: 969)
Name: NF4891-Insertion-3
Description: NF4891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4891-Insertion-3 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 817; Significance: 0; HSPs: 26)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 817; E-Value: 0
Query Start/End: Original strand, 8 - 910
Target Start/End: Original strand, 9288790 - 9289689
Alignment:
| Q |
8 |
aaggatggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9288790 |
aaggatggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgagaatttattaatgatactg |
9288889 |
T |
|
| Q |
108 |
catgtgttattctgcaagatgctatgaatattgaaatgagtttgagatgcatgatgaatatagctggcatgtcttctttgtgttggcaatcggaaaacct |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9288890 |
catgtgttattctgcaagatgctatgaatattgaaatgagtttgagatgcatgatgaatatagctggcatgtcttctttgtgttggcaatcggaaaacct |
9288989 |
T |
|
| Q |
208 |
cagtagtcattagtaagtttcctcctctgctgccacattacactcatcaattaaattattaaaattggttctgcttgttgcttctccgattacgtgccac |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9288990 |
cagtagtcattagtaagtttcctcctctgctgccacattacactcatcaattaaattattaaaattggttctgcttgttgcttctccgattacgtgccac |
9289089 |
T |
|
| Q |
308 |
tcgtgcatacacaaacaactaatccattattttgttctactgaatataaatcataataattgatattgttgtctgtcttttgatcatatatatcccacaa |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9289090 |
tcgtgcatacacaaacaactaatccattattttgttctactgaatataaatcataataattgatattgttgtctgtcttttgatcatatatatcccacaa |
9289189 |
T |
|
| Q |
408 |
gatctggatctcatccttcaaaaatccattctttacctgttctcgcatctcaacagggaacatgccaggcaatagatacctctgaaccaaaaacagcacc |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9289190 |
gatctggatctcatccttcaaaaatccattctttacctgttctcgcatctcgacagggaacatgccaggcaatagatacctctgaaccaaaaacagcacc |
9289289 |
T |
|
| Q |
508 |
tttttattatattagaaacaaagtgataat-aaggtttttgtttaccaacactcagaggacatgccagttaactatacacctcaaatacgtcacattacc |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9289290 |
tttttattatattagaaacaaagtgataatgaaggtttttgtttaccaacactcagaggacatgccagttaactatacacctcaaatacatcacattacc |
9289389 |
T |
|
| Q |
607 |
attatgtactgtataataatgcacaatgtatggctcaattgggacaagtttaccaaattttaaggaaaactcatttagttaccaccacatgctcatattg |
706 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9289390 |
attatggactgtataataatgcacaatgtatggctcaattgggacaagtttaccaaattttaaggaaaactcatttagttaccaccacatgctcatattg |
9289489 |
T |
|
| Q |
707 |
attcagagaggttagctacactacatttgctgcannnnnnnnnnnnnnaatgaagcatgaattgctttctattatatatagtgttgaagaagatgaaatt |
806 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9289490 |
attcagagaggttagctacactacatgtgctgca----ttttttttttaatgaagcatgaattgctttctattatatatagtgttaaagaagatgaaatt |
9289585 |
T |
|
| Q |
807 |
tgttaggaagttgatcgcatcattgaagaaggtggatggagaatttggactatcaccattattgaatgaagattatgagctcactgtgtttactagagtg |
906 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
9289586 |
tgttaggaagttgatcgcatcattgaagaaggtggatggagaatttggactatcaccattattgaatgaagattatgaactcactgtttttactagagtg |
9289685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 11 - 725
Target Start/End: Original strand, 9293314 - 9294011
Alignment:
| Q |
11 |
gatggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9293314 |
gatggtgtagagcatgtggtgcctacatgaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgagactgcat |
9293413 |
T |
|
| Q |
111 |
gtgttattctgcaagatgctatgaatattgaaatgagtttgagatgcatgatgaatatagctggcatgtcttctttgtgttggcaatcggaaaacctcag |
210 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||| ||||||||| |
|
|
| T |
9293414 |
gtgttattctgctagatgctatgaatattgaaatgagtttgaggtgcatgatgaatatagctggcatgtcttcatagtgttggcaatcataaaacctcat |
9293513 |
T |
|
| Q |
211 |
tagtcattagtaagtttcctcctctgctgccacattacactcatcaattaaattattaaaattggttctgcttgttgcttctccgattacgtgccactcg |
310 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||| | ||||| || ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
9293514 |
tagtcatcagtaagttttctcctctgctgccacatttct------------attataaatcttggtgctgcttgttgcttctccgattacgtgccactcg |
9293601 |
T |
|
| Q |
311 |
tgcatacacaaacaactaatccattattttgttctactgaa-tataaatcataataattgatattgttgtctgtcttttgatcatatatatcccacaaga |
409 |
Q |
| |
|
||||||||||| |||| |||||||||||||||| |||| || | ||||||||||||||| |||||||||||||||||||||||| || ||||||||| |
|
|
| T |
9293602 |
tgcatacacaaccaacgaatccattattttgttatactaaaatgtaaatcataataatttatattgttgtctgtcttttgatcaaat----cccacaaga |
9293697 |
T |
|
| Q |
410 |
tctggatctcatccttcaaaaatccattctttacctgttctcgcatctcaacagggaacatgccaggcaatagatacctctgaaccaaaaacagcacctt |
509 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||| | |
|
|
| T |
9293698 |
tctggatctcatccttctaaaatccattctttaccagttctagcacctcaacagggaacatgccagccaattgatacctctgaaccaaaaacagcaccgt |
9293797 |
T |
|
| Q |
510 |
tttattatattagaaacaaagtgataat-aaggtttttgtttaccaacactcagaggacatgccagttaactatacacctcaaatacgtcacattaccat |
608 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||| |||||||||||||||| | ||||||||| |
|
|
| T |
9293798 |
tttattatattagtaacaaagtgataatgaaggtttttgtttaccaacactttgaggacatttaagttaattatacacctcaaatacatttcattaccat |
9293897 |
T |
|
| Q |
609 |
tatgtactgtataataatgcacaatgtatggctcaattgggacaagtttaccaaattttaaggaaaactcatttagttaccaccacatgctcatattgat |
708 |
Q |
| |
|
|||| || ||||||||||||||||||| |||| ||| | |||||||||||||||||||||||||||| ||| || | |||||||||||| || ||| |
|
|
| T |
9293898 |
tatggacagtataataatgcacaatgtttggcacaaatttgacaagtttaccaaattttaaggaaaac---ttttgtagctaccacatgctcacatggat |
9293994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 8 - 442
Target Start/End: Original strand, 9297918 - 9298364
Alignment:
| Q |
8 |
aaggatggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactg |
107 |
Q |
| |
|
||||||||||| |||||||||||| | | || ||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9297918 |
aaggatggtgttgagcatgtggtgtcaatatggatttccctttgaatatggtaagcttgttacatgttagtccaacattgtgaatatattaatgatactg |
9298017 |
T |
|
| Q |
108 |
catgtgttattctgcaagatgct-atgaatattgaaatgagtttgagatgcatgatgaatatagctggcatgtcttctttgtgttggcaatcggaaaacc |
206 |
Q |
| |
|
||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||||| |
|
|
| T |
9298018 |
catgtgttattctgcaagatgcttatga-tattaaaatgagtttgagatgcatgatgaatatagctgccatgtctttatagtgttggcaatcagaaaaca |
9298116 |
T |
|
| Q |
207 |
tcagtagtcattagtaagtttcctcctctgctgccacattacactcatcaattaaattattaaaattggttctgcttgttgcttctccgattacgtgcca |
306 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9298117 |
tcattagtcattagtaagtttcctcctctgctgccacattacattcatcaattaaattatgaaaattggtgctgcttgttgcttctccgattacgtgcca |
9298216 |
T |
|
| Q |
307 |
ctcgtgcatacacaaacaactaatccattattttgttctactgaatataaatcata----------------ataattgatattgttgtctgtcttttga |
390 |
Q |
| |
|
||||| ||||||||| | ||||||||||||||||||| |||| ||| | ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9298217 |
ctcgtacatacacaacctactaatccattattttgttttactaaatgttaatcataatagtttttttgttacataattgatattgttgtctgtcttttga |
9298316 |
T |
|
| Q |
391 |
tcatatatatcccacaagatctggatctcatccttcaaaaatccattcttta |
442 |
Q |
| |
|
|| ||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9298317 |
tc----atatccctcaagatctggatctcatccttcaaaaattcattcttta |
9298364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 9373235 - 9372962
Alignment:
| Q |
11 |
gatggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcat |
110 |
Q |
| |
|
||||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9373235 |
gatggagtagagcatgtggtgcctacatgaattttcctttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcat |
9373136 |
T |
|
| Q |
111 |
gtgttattctgcaagatgctatgaatattgaaatgagtttgagatgcatgatgaatatagctggcatgtcttctttgtgttggcaatcggaaaacctcag |
210 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
9373135 |
gtgttattctgcaagatgccatgaatattaaaatgagtttgagatgcatgatgaatatagctggcatgtcttctttgtgttggcaatcagaaaacatcat |
9373036 |
T |
|
| Q |
211 |
tagtcattagtaagttt---cctcctctgctgccacattacactcatcaattaaattattaaaattggttctgc |
281 |
Q |
| |
|
||||||| | ||||||| | | ||||||||||||||||| ||||||| || |||||||| |||||| |||| |
|
|
| T |
9373035 |
tagtcatcaataagtttgtgcatactctgctgccacattaccctcatcatttcaattattattattggtgctgc |
9372962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 9305782 - 9305950
Alignment:
| Q |
11 |
gatggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcat |
110 |
Q |
| |
|
||||||||||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9305782 |
gatggtgtagagcatgtggggcctacatgaatttccctttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcat |
9305881 |
T |
|
| Q |
111 |
gtgttattctgcaagatgc-tatgaatattgaaatgagtttgagatgcatgatgaatatagctggcatgt |
179 |
Q |
| |
|
||| |||| |||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
9305882 |
gtgatattttgcaagatgcttatg-atattgaaatgagtttgaggttcatgatgaatatagctggcatgt |
9305950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 9302164 - 9302429
Alignment:
| Q |
11 |
gatggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcat |
110 |
Q |
| |
|
|||||||||||||||||||||||| || | || || ||| ||||||||||||||||| |||| ||||||||||||| | | ||||||| ||||| |
|
|
| T |
9302164 |
gatggtgtagagcatgtggtgcctgcaggatttccc-tttaaatatggtaagcttgtttgatgt-----caacattgtgaatatgtgaatgatattgcat |
9302257 |
T |
|
| Q |
111 |
gtgttattctgcaagatgct-atgaatattgaaatgagtttgagatgcatgatgaatatagctggcatgtcttctttgtgttggcaatcggaaaacctca |
209 |
Q |
| |
|
||| |||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
9302258 |
gtgatattctgcaagatgcttatga-tattgaaatgagtttgaggtgcatgatgaatatagctggcatgtctttgtagtgttggcaatcagaaaacctca |
9302356 |
T |
|
| Q |
210 |
gtagtcattagtaagttt-cctcctctgctgccacattacactcatcaattaaattattaaaattggttctgc |
281 |
Q |
| |
|
||||||| | ||||| |||||| |||||||||||||| |||||| || |||||| ||||||||| |||| |
|
|
| T |
9302357 |
ttagtcatcaactagtttgcctcctttgctgccacattaccctcatcgtttcaattataaaaattggtgctgc |
9302429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 9332585 - 9332846
Alignment:
| Q |
11 |
gatggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcat |
110 |
Q |
| |
|
|||||| ||||||||||||||||| || | || || ||||||||| |||| ||||||| ||||| ||| |||||||||| | | |||| || |||| |
|
|
| T |
9332585 |
gatggtttagagcatgtggtgcctgtatgattt-ccttttgaatatagtaaccttgttagatgttttcccagcattgtgaatatgtgaatggtatcgcat |
9332683 |
T |
|
| Q |
111 |
gtgttattctgcaagatgctatgaatattgaaatgagtttgagatgcatgatgaatatagctggcatgtcttctttgtgttggcaatcggaaaacctcag |
210 |
Q |
| |
|
||| |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
9332684 |
gtggtattatgcaagatgctatga-tattaaaatgaatttgagatgcatgatgaatatagctggcatgtcttcctagtgttggcaatcagaaaacctcat |
9332782 |
T |
|
| Q |
211 |
tagtcattagtaag-tttcctcctctgctgccacattacactcatcaattaaattattaaaatt |
273 |
Q |
| |
|
||||||| | | || || |||||| |||||||||||||| ||||||| || |||||| |||||| |
|
|
| T |
9332783 |
tagtcatcaattagcttgcctcctttgctgccacattaccctcatcatttcaattataaaaatt |
9332846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 9352309 - 9352475
Alignment:
| Q |
11 |
gatggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcat |
110 |
Q |
| |
|
|||||||||||||||||||||||| ||| | || | ||| |||||||||||||||||||||||| |||||||||||||| | | ||||||||||||| |
|
|
| T |
9352309 |
gatggtgtagagcatgtggtgcctgcatgatttcc--tttaaatatggtaagcttgttacatgttttcccaacattgtgaatatgtgaatgatactgcat |
9352406 |
T |
|
| Q |
111 |
gtgttattctgcaagatgc-tatgaatattgaaatgagtttgagatgcatgatgaatatagctggcatgt |
179 |
Q |
| |
|
||| ||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
9352407 |
gtgatattctgcaagatgcttatg-atattgaaatgagtttgaggttcatgatgaatatagctggcatgt |
9352475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 544 - 724
Target Start/End: Original strand, 9298467 - 9298644
Alignment:
| Q |
544 |
tttgtttaccaacactcagaggacatgccagttaactatacacctcaaatacgtcacattaccattatgtactgtataataatgcacaatgtatggctca |
643 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||| |||||||||| | ||| | ||||||||||||| | ||||||||||| |||||||| |||| || |
|
|
| T |
9298467 |
tttgtataccaacacttagaggacatgccagttaattatacacctcgagtacatttcattaccattatgaaatgtataataatacacaatgtttggcaca |
9298566 |
T |
|
| Q |
644 |
attgggacaagtttaccaaattttaaggaaaactcatttagttaccaccacatgctcatattgattcagagaggttagcta |
724 |
Q |
| |
|
| |||||||||||| |||||||||||||| |||| ||| | |||||||||||| ||||||| |||||||||||||| |
|
|
| T |
9298567 |
aacatgacaagtttaccgaattttaaggaaaattcatgtag---ctaccacatgctcacattgattaagagaggttagcta |
9298644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 11 - 276
Target Start/End: Complemental strand, 9367308 - 9367053
Alignment:
| Q |
11 |
gatggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcat |
110 |
Q |
| |
|
|||||||||||||||||||||||| ||| | || || |||||||||||||||||||||| ||||| |||||||||||||| | | ||||||| |||| |
|
|
| T |
9367308 |
gatggtgtagagcatgtggtgcctgcatga-ttcccctttgaatatggtaagcttgttagatgttttcccaacattgtgaatatttgaatgatatagcat |
9367210 |
T |
|
| Q |
111 |
gtgttattctgcaagatgctatgaatattgaaatgagtttgagatgcatgatgaatatagctggcatgtcttctttgtgttggcaatcggaaaacctcag |
210 |
Q |
| |
|
|||||| |||||| ||| ||||| ||||||||||||| |||| ||||||||||||||||||||| || ||||||||||| |||||||||| |
|
|
| T |
9367209 |
gtgttaatctgca--atg------atattaaaatgagtttgaggtgcacgatgaatatagctggcatgtcctccgagtgttggcaattagaaaacctcat |
9367118 |
T |
|
| Q |
211 |
tagtcattagtaag-tttcctcctctgctgccacattacactcatcaattaaattattaaaattggt |
276 |
Q |
| |
|
|||||| | | || || |||||| |||||||||| |||| |||||| || ||||| |||||||||| |
|
|
| T |
9367117 |
tagtcaccaattagcttgcctcctttgctgccaca-tacattcatcatttcaatta-taaaattggt |
9367053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 12 - 346
Target Start/End: Complemental strand, 9348719 - 9348370
Alignment:
| Q |
12 |
atggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcatg |
111 |
Q |
| |
|
||||| ||||||||||| || || ||| |||| |||||||||||||||||| |||| | || | |||||||||||||| | ||||||||| |||||| |
|
|
| T |
9348719 |
atggtttagagcatgtgctggctgcatgaatttccatttgaatatggtaaggttgtcatatctctacccaacattgtgaatatgttaatgatattgcatg |
9348620 |
T |
|
| Q |
112 |
tgttattctgcaagatgctatgaatattgaaatgagtttgagatgcatgatgaatat------------agctggcatgtcttctttgtgttggcaatcg |
199 |
Q |
| |
|
|| || |||||||||||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||| | ||||||||| | |
|
|
| T |
9348619 |
tgatactctgcaagatgctatg-atattgaaattggttcaagatgcatgatgaatattattcactataaaactggcatgtcttcctaatgttggcaaaca |
9348521 |
T |
|
| Q |
200 |
gaaaacctcagtagtcattagtaagttt-cctcctctgctgccacattacactcatcaattaaattattaaaattgg---ttctgcttgttgcttctccg |
295 |
Q |
| |
|
|||||||| | ||||||| | | ||||| ||||||||||||| |||||| |||||| | || |||||| |||||||| | ||| | ||| | ||| | |
|
|
| T |
9348520 |
gaaaacctgattagtcatcaattagtttgcctcctctgctgctacattagactcataatttcaattataaaaattggtgatgctgttaattgatactcag |
9348421 |
T |
|
| Q |
296 |
attacgtgccactcgtgcatacacaaacaactaatccattattttgttcta |
346 |
Q |
| |
|
||||| ||||||||||| ||| |||| || |||||||||||||||||||| |
|
|
| T |
9348420 |
attacatgccactcgtgtatagacaacgaattaatccattattttgttcta |
9348370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 9372881 - 9372803
Alignment:
| Q |
363 |
ataattgatattgttgtctgtcttttgatcatatatatcccacaagatctggatctcatccttcaaaaatccattcttta |
442 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9372881 |
ataattgatattgttgtctgtgttt-gatcatatatatcccacaagatctggatctcatccttctgaaatccattcttta |
9372803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 12 - 346
Target Start/End: Complemental strand, 9309683 - 9309330
Alignment:
| Q |
12 |
atggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcatg |
111 |
Q |
| |
|
||||| ||||||||||||||||| ||| ||| || |||||||||||||||||||| | | | |||||||||||||| | ||||||||| |||||| |
|
|
| T |
9309683 |
atggtttagagcatgtggtgcctgcatggatttccctttgaatatggtaagcttgtcatacctctacccaacattgtgaatatgttaatgatattgcatg |
9309584 |
T |
|
| Q |
112 |
tgttattctgcaagatgctatgaatattgaaatgagtttgagatgcatgatga------------atatagctggcatgtcttctttgtgttggcaatcg |
199 |
Q |
| |
|
|| || ||||||||||||| || |||||||||| ||| ||||||||||||| ||||| ||||||||||||| | ||||||||||| |
|
|
| T |
9309583 |
tgatactctgcaagatgctctg-atattgaaattggttcaagatgcatgatgaatattattcactatataactggcatgtcttcctaatgttggcaatca |
9309485 |
T |
|
| Q |
200 |
gaaaacctcagtagtc----attagtaagttt-cctcctctgctgccacattacactcatcaattaaattattaaaattgg---ttctgcttgttgcttc |
291 |
Q |
| |
|
|||||||||| ||||| ||||| ||||| ||||||||||||| |||||| |||||| | || |||||| |||||||| | ||| | ||| | | |
|
|
| T |
9309484 |
gaaaacctcattagtcatcaattagctagtttgcctcctctgctgctacattagactcataatttcaattataaaaattggtgatgctgataattgatac |
9309385 |
T |
|
| Q |
292 |
tccgattacgtgccactcgtgcatacacaaacaactaatccattattttgttcta |
346 |
Q |
| |
|
| |||||| ||||||||||| ||| |||| || |||||||||||||||||||| |
|
|
| T |
9309384 |
ttagattacatgccactcgtgtatagacaacgaattaatccattattttgttcta |
9309330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 363 - 719
Target Start/End: Complemental strand, 9355811 - 9355443
Alignment:
| Q |
363 |
ataattgatattgttgtctgtcttttgatcatatatatcccacaagatctggatctcatccttcaaaaatccattcttta---------cctgttctcgc |
453 |
Q |
| |
|
|||||||| ||||||||| | |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| || ||||| || |
|
|
| T |
9355811 |
ataattgacattgttgtccatattttgatcatat----cccacaagatctggatctcatccttctaaaatccattctttaaaccatttcccagttctagc |
9355716 |
T |
|
| Q |
454 |
atctcaac-agggaacatgccaggcaatagatacctctgaaccaaaaacagcacctttttattatattagaaacaaagtgat-aataaggtttt-tgttt |
550 |
Q |
| |
|
||||| | | ||||||||| ||||||||||| |||||| |||||| | ||||||| || |||||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
9355715 |
tcctcaaatatgaaacatgccaagcaatagatacatctgaagcaaaaatgac-ccttttttttttattagaaacaaagtgattaatgaggttttctgttt |
9355617 |
T |
|
| Q |
551 |
accaacactcagaggacatgccagttaactatacacctcaaatacgtcacatta----ccattatgtac------tgtataataatgcacaatgtatggc |
640 |
Q |
| |
|
| |||||| |||||||||||||| |||||||||||| | | | |||||| |||| ||| | |||||||||||||||||||| |||| |
|
|
| T |
9355616 |
agtaacacttggaggacatgccagtgt--tatacacctcaactccattacattaatcaccatcatgcatatgacatgtataataatgcacaatgtttggc |
9355519 |
T |
|
| Q |
641 |
tcaattgggacaagtttaccaaattttaaggaaaactcatttagttaccaccacatgctcatattgattcagagaggtt |
719 |
Q |
| |
|
||| || ||||||||||||||||| |||||||||||||| || |||||||||||||| || |||| ||| ||||| |
|
|
| T |
9355518 |
acaaatgtgacaagtttaccaaattctaaggaaaactcatggag---ccaccacatgctcacatagattaagaaaggtt |
9355443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 9356089 - 9355934
Alignment:
| Q |
12 |
atggtgtagagcatgtggtgcctacataaattgccatttgaatatggtaagcttgttacatgttagtccaacattgtgaatttattaatgatactgcatg |
111 |
Q |
| |
|
||||| ||||||||||| || || ||| |||| |||||||||||||||||| |||| | || | |||||||||||||| | ||||||||| |||||| |
|
|
| T |
9356089 |
atggtttagagcatgtgctggctgcatgaatttccatttgaatatggtaaggttgtcatatctctacccaacattgtgaatatgttaatgatattgcatg |
9355990 |
T |
|
| Q |
112 |
tgttattctgcaagatgctatgaatattgaaatgagtttgagatgcatgatgaatat |
168 |
Q |
| |
|
|| || ||||||||||||| || |||||||||| ||| ||||||||||||||||| |
|
|
| T |
9355989 |
tgatactctgcaagatgctctg-atattgaaattggttcaagatgcatgatgaatat |
9355934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 9366967 - 9366889
Alignment:
| Q |
363 |
ataattgatattgttgtctgtcttttgatcatatatatcccacaagatctggatctcatccttcaaaaatccattcttta |
442 |
Q |
| |
|
||||||||||||| ||||||| ||||| |||| ||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9366967 |
ataattgatattgctgtctgt-ttttggtcatgtatatccaacaagatctggatctcatccttctgaaatccattcttta |
9366889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 9309290 - 9309215
Alignment:
| Q |
363 |
ataattgatattgttgtctgtcttttgatcatatatatcccacaagatctggatctcatccttcaaaaatccattcttta |
442 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9309290 |
ataactgatattgttgtctgtcttttgatcatat----ccctcaagatctggatctcatccttctgaaatccattcttta |
9309215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 9348330 - 9348255
Alignment:
| Q |
363 |
ataattgatattgttgtctgtcttttgatcatatatatcccacaagatctggatctcatccttcaaaaatccattcttta |
442 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9348330 |
ataactgatattgttgtctgtcttttgatcatata----cctcaagatctggatctcatccttctgaaatccattcttta |
9348255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 616 - 680
Target Start/End: Complemental strand, 9308271 - 9308207
Alignment:
| Q |
616 |
tgtataataatgcacaatgtatggctcaattgggacaagtttaccaaattttaaggaaaactcat |
680 |
Q |
| |
|
|||||||||||||||||||| |||| ||| || ||||||||||||||||| |||||||||||||| |
|
|
| T |
9308271 |
tgtataataatgcacaatgtttggcacaaatgtgacaagtttaccaaattctaaggaaaactcat |
9308207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 807 - 875
Target Start/End: Original strand, 9298677 - 9298742
Alignment:
| Q |
807 |
tgttaggaagttgatcgcatcattgaagaaggtggatggagaatttggactatcaccattattgaatga |
875 |
Q |
| |
|
||||||||| ||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
9298677 |
tgttaggaatttgatcgaatcattgaaga---tggatggagaatttggagtatcaccatttttgaatga |
9298742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 810 - 884
Target Start/End: Complemental strand, 9307789 - 9307715
Alignment:
| Q |
810 |
taggaagttgatcgcatcattgaagaaggtggatggagaatttggactatcaccattattgaatgaagattatga |
884 |
Q |
| |
|
||||||||||||| |||||||||| ||| |||||| ||||||| | ||| ||||||| ||||||||||||||| |
|
|
| T |
9307789 |
taggaagttgatcacatcattgaaaaagatggatgtagaatttacaacatccccattatggaatgaagattatga |
9307715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 557
Target Start/End: Complemental strand, 9309182 - 9309090
Alignment:
| Q |
464 |
ggaacatgccaggcaatagatacctctgaaccaaaaacagcacctttttattatattagaaacaaagtg-ataataaggtttt-tgtttaccaaca |
557 |
Q |
| |
|
|||||||||||| ||||||||||| ||||| |||||| || |||||| ||||||||||||| ||||| ||||| ||||||| |||||| ||||| |
|
|
| T |
9309182 |
ggaacatgccagacaatagataccactgaatcaaaaa---caactttttgttatattagaaaccaagtgaataatgaggttttctgtttagcaaca |
9309090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 810 - 855
Target Start/End: Complemental strand, 9347623 - 9347578
Alignment:
| Q |
810 |
taggaagttgatcgcatcattgaagaaggtggatggagaatttgga |
855 |
Q |
| |
|
||||| ||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
9347623 |
taggaggttgatcacatcattgaagaagatggatggagaatttgga |
9347578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 662
Target Start/End: Complemental strand, 9366766 - 9366651
Alignment:
| Q |
546 |
tgtttaccaacactcagaggacatgccagttaactatacacctcaaatacgtcacattaccattatgtactgtataataatgcacaatgtatggctcaat |
645 |
Q |
| |
|
||||||||||||||| ||||||||| || | | |||||||||||||| | | ||||||||||||| |||||||||||||| ||||| |||| || |
|
|
| T |
9366766 |
tgtttaccaacactcggaggacatggcaagtca-tatacacctcaaatccatttcattaccattatggcatgtataataatgcataatgtttggcataaa |
9366668 |
T |
|
| Q |
646 |
tgggacaagtttaccaa |
662 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
9366667 |
cgtgacaagtttaccaa |
9366651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 755 - 787
Target Start/End: Complemental strand, 9372622 - 9372590
Alignment:
| Q |
755 |
aatgaagcatgaattgctttctattatatatag |
787 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
9372622 |
aatgaagcatgaattgctttctattatatatag |
9372590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 810 - 852
Target Start/End: Complemental strand, 9355051 - 9355009
Alignment:
| Q |
810 |
taggaagttgatcgcatcattgaagaaggtggatggagaattt |
852 |
Q |
| |
|
||||||||||||| ||||||||||| || |||||||||||||| |
|
|
| T |
9355051 |
taggaagttgatcacatcattgaaggagatggatggagaattt |
9355009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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