View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4891_low_7 (Length: 360)

Name: NF4891_low_7
Description: NF4891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4891_low_7
NF4891_low_7
[»] chr4 (51 HSPs)
chr4 (18-232)||(45685363-45685577)
chr4 (230-346)||(47750219-47750335)
chr4 (263-346)||(31848768-31848851)
chr4 (263-346)||(53184090-53184173)
chr4 (272-345)||(54356891-54356964)
chr4 (253-339)||(39113756-39113843)
chr4 (272-338)||(12158142-12158208)
chr4 (253-332)||(6290584-6290665)
chr4 (253-332)||(34199276-34199357)
chr4 (253-332)||(40721019-40721100)
chr4 (273-346)||(55408563-55408636)
chr4 (254-332)||(3533314-3533394)
chr4 (263-332)||(2215289-2215360)
chr4 (263-332)||(46917518-46917589)
chr4 (272-346)||(39049077-39049151)
chr4 (253-332)||(8991767-8991848)
chr4 (272-332)||(33523274-33523335)
chr4 (272-332)||(33604661-33604722)
chr4 (272-332)||(35809167-35809228)
chr4 (272-328)||(38173559-38173616)
chr4 (272-332)||(45081419-45081480)
chr4 (254-324)||(3618468-3618540)
chr4 (263-346)||(10089842-10089925)
chr4 (228-338)||(19409091-19409201)
chr4 (272-339)||(39533282-39533349)
chr4 (276-346)||(40596756-40596826)
chr4 (272-332)||(28899336-28899397)
chr4 (262-346)||(33526710-33526795)
chr4 (272-332)||(48506613-48506674)
chr4 (272-324)||(55560494-55560547)
chr4 (272-332)||(56054021-56054082)
chr4 (254-332)||(16020832-16020912)
chr4 (254-332)||(23540433-23540513)
chr4 (273-332)||(48403907-48403967)
chr4 (255-313)||(4981495-4981554)
chr4 (262-346)||(36656554-36656636)
chr4 (274-332)||(52017350-52017409)
chr4 (272-346)||(53348054-53348129)
chr4 (253-322)||(55933-56003)
chr4 (276-332)||(13094397-13094454)
chr4 (272-332)||(13110565-13110626)
chr4 (265-332)||(23389936-23390005)
chr4 (253-344)||(51392215-51392305)
chr4 (272-332)||(33077881-33077941)
chr4 (274-313)||(19272789-19272828)
chr4 (264-324)||(34464038-34464100)
chr4 (272-313)||(17329940-17329980)
chr4 (253-344)||(34564108-34564200)
chr4 (273-306)||(18469402-18469435)
chr4 (276-324)||(31336369-31336418)
chr4 (254-324)||(16175030-16175102)
[»] chr7 (32 HSPs)
chr7 (227-346)||(22191179-22191298)
chr7 (263-346)||(21654841-21654924)
chr7 (263-339)||(48984902-48984978)
chr7 (263-346)||(30630808-30630891)
chr7 (254-339)||(22737596-22737682)
chr7 (263-332)||(35029116-35029187)
chr7 (241-346)||(24793464-24793569)
chr7 (272-346)||(43571088-43571162)
chr7 (255-339)||(35193120-35193205)
chr7 (272-332)||(36518519-36518580)
chr7 (272-338)||(114494-114560)
chr7 (272-332)||(30566604-30566665)
chr7 (276-332)||(40302498-40302555)
chr7 (263-332)||(5813092-5813163)
chr7 (272-346)||(25038587-25038661)
chr7 (272-346)||(25218802-25218876)
chr7 (272-332)||(39769733-39769794)
chr7 (272-324)||(42881362-42881415)
chr7 (253-332)||(47159502-47159582)
chr7 (266-332)||(30720117-30720185)
chr7 (255-339)||(38970017-38970104)
chr7 (280-346)||(26013193-26013258)
chr7 (241-329)||(43202150-43202239)
chr7 (271-332)||(45549626-45549688)
chr7 (272-324)||(28318058-28318111)
chr7 (272-332)||(33078792-33078853)
chr7 (276-332)||(33508533-33508590)
chr7 (253-332)||(37951731-37951814)
chr7 (272-313)||(32130298-32130339)
chr7 (276-332)||(32748805-32748862)
chr7 (276-316)||(37887855-37887895)
chr7 (265-332)||(20354219-20354288)
[»] chr3 (63 HSPs)
chr3 (230-339)||(25832725-25832834)
chr3 (230-346)||(41890497-41890613)
chr3 (228-339)||(42601722-42601833)
chr3 (263-346)||(42601499-42601582)
chr3 (263-339)||(51427096-51427172)
chr3 (263-346)||(33934987-33935070)
chr3 (253-346)||(46572919-46573013)
chr3 (230-339)||(49823171-49823271)
chr3 (274-339)||(49147289-49147354)
chr3 (265-346)||(49357491-49357572)
chr3 (258-346)||(50033657-50033746)
chr3 (255-346)||(37410413-37410504)
chr3 (272-346)||(35853186-35853260)
chr3 (272-346)||(49710383-49710457)
chr3 (251-346)||(138958-139055)
chr3 (262-345)||(35424004-35424088)
chr3 (272-340)||(43022653-43022721)
chr3 (263-332)||(25790782-25790853)
chr3 (272-339)||(50017058-50017125)
chr3 (253-332)||(29701667-29701748)
chr3 (251-346)||(47701056-47701153)
chr3 (254-332)||(6048703-6048783)
chr3 (263-338)||(25450636-25450712)
chr3 (254-324)||(42560887-42560959)
chr3 (254-332)||(51999244-51999324)
chr3 (263-332)||(5845147-5845218)
chr3 (263-332)||(17466510-17466581)
chr3 (263-332)||(47144168-47144239)
chr3 (251-339)||(20139343-20139433)
chr3 (272-332)||(30418436-30418497)
chr3 (263-339)||(33748680-33748757)
chr3 (258-344)||(33795491-33795575)
chr3 (272-332)||(43473895-43473956)
chr3 (253-332)||(50415837-50415918)
chr3 (254-324)||(4045966-4046038)
chr3 (272-331)||(12974673-12974733)
chr3 (254-324)||(32120453-32120525)
chr3 (254-324)||(44084295-44084367)
chr3 (275-334)||(7521143-7521202)
chr3 (272-339)||(28410399-28410466)
chr3 (272-332)||(6832389-6832450)
chr3 (272-332)||(26165561-26165622)
chr3 (272-324)||(41183279-41183332)
chr3 (273-332)||(37183844-37183904)
chr3 (266-332)||(46123924-46123992)
chr3 (276-340)||(50176085-50176149)
chr3 (272-329)||(27847414-27847472)
chr3 (275-339)||(15493823-15493885)
chr3 (272-326)||(7008060-7008115)
chr3 (254-312)||(10426459-10426518)
chr3 (299-346)||(30862791-30862838)
chr3 (272-332)||(11908024-11908085)
chr3 (272-313)||(35472653-35472694)
chr3 (276-316)||(744225-744265)
chr3 (254-313)||(36178731-36178791)
chr3 (272-316)||(50734021-50734065)
chr3 (272-316)||(50778790-50778834)
chr3 (272-315)||(42258322-42258365)
chr3 (272-339)||(49407338-49407405)
chr3 (274-316)||(38572178-38572220)
chr3 (272-332)||(28155235-28155296)
chr3 (276-313)||(52000089-52000126)
chr3 (276-332)||(55026748-55026805)
[»] chr8 (41 HSPs)
chr8 (228-346)||(34955660-34955778)
chr8 (228-346)||(26632147-26632266)
chr8 (230-344)||(30470814-30470929)
chr8 (263-346)||(5212285-5212368)
chr8 (263-338)||(42860708-42860783)
chr8 (253-346)||(18029493-18029587)
chr8 (254-346)||(36912401-36912494)
chr8 (264-346)||(13814942-13815024)
chr8 (255-339)||(41477168-41477253)
chr8 (253-339)||(38584895-38584982)
chr8 (254-346)||(8609975-8610068)
chr8 (255-338)||(4625496-4625580)
chr8 (263-346)||(17741705-17741789)
chr8 (263-346)||(5735281-5735364)
chr8 (261-332)||(35099426-35099499)
chr8 (273-332)||(42859929-42859989)
chr8 (253-346)||(39811052-39811147)
chr8 (272-332)||(1958187-1958248)
chr8 (272-332)||(43524398-43524459)
chr8 (272-332)||(45101032-45101093)
chr8 (253-339)||(31129503-31129591)
chr8 (276-346)||(30289724-30289794)
chr8 (272-332)||(15053635-15053696)
chr8 (272-332)||(40283478-40283539)
chr8 (272-332)||(43525096-43525157)
chr8 (273-332)||(26244501-26244561)
chr8 (276-344)||(29637151-29637219)
chr8 (254-324)||(35931846-35931918)
chr8 (263-332)||(43618356-43618427)
chr8 (253-346)||(7990414-7990508)
chr8 (272-332)||(12272489-12272550)
chr8 (265-332)||(13947361-13947430)
chr8 (272-333)||(23353190-23353251)
chr8 (273-332)||(44503171-44503231)
chr8 (253-346)||(24431860-24431951)
chr8 (263-344)||(26749404-26749486)
chr8 (274-333)||(30532456-30532516)
chr8 (277-331)||(1634849-1634904)
chr8 (265-310)||(44149865-44149911)
chr8 (276-332)||(23549720-23549777)
chr8 (272-332)||(29731698-29731758)
[»] chr1 (42 HSPs)
chr1 (228-346)||(44651030-44651148)
chr1 (263-345)||(643817-643899)
chr1 (265-346)||(44451264-44451345)
chr1 (263-346)||(17783368-17783452)
chr1 (253-346)||(44334270-44334364)
chr1 (258-346)||(8464085-8464174)
chr1 (255-338)||(41542313-41542395)
chr1 (263-332)||(45239129-45239200)
chr1 (275-346)||(52933762-52933833)
chr1 (275-346)||(52941397-52941468)
chr1 (253-346)||(3755022-3755116)
chr1 (261-346)||(44929284-44929370)
chr1 (247-338)||(20584853-20584945)
chr1 (254-332)||(48388115-48388195)
chr1 (266-332)||(48404324-48404392)
chr1 (263-332)||(27630467-27630538)
chr1 (263-332)||(31468124-31468195)
chr1 (263-332)||(37420351-37420422)
chr1 (272-332)||(19578917-19578978)
chr1 (272-332)||(45456158-45456219)
chr1 (254-324)||(2478343-2478415)
chr1 (272-339)||(8468325-8468393)
chr1 (255-332)||(29523686-29523765)
chr1 (274-332)||(31159390-31159449)
chr1 (265-332)||(14096684-14096753)
chr1 (272-332)||(33164413-33164474)
chr1 (254-346)||(40500382-40500474)
chr1 (274-350)||(45623520-45623596)
chr1 (272-331)||(23092770-23092830)
chr1 (254-332)||(51494479-51494559)
chr1 (274-332)||(37646567-37646626)
chr1 (272-332)||(30878551-30878612)
chr1 (253-332)||(36230338-36230419)
chr1 (273-332)||(37822571-37822632)
chr1 (273-332)||(37691297-37691357)
chr1 (274-324)||(29919373-29919424)
chr1 (255-332)||(35847128-35847207)
chr1 (276-346)||(36302987-36303057)
chr1 (296-346)||(48729347-48729397)
chr1 (275-346)||(51520221-51520293)
chr1 (228-261)||(643891-643924)
chr1 (276-332)||(47300504-47300561)
[»] chr5 (42 HSPs)
chr5 (253-346)||(8176297-8176391)
chr5 (266-346)||(4577002-4577082)
chr5 (265-346)||(10569804-10569885)
chr5 (226-346)||(41263318-41263439)
chr5 (253-346)||(14278812-14278906)
chr5 (228-344)||(25032311-25032428)
chr5 (253-339)||(41153007-41153094)
chr5 (261-332)||(31013851-31013924)
chr5 (272-346)||(25652816-25652890)
chr5 (272-334)||(9274456-9274517)
chr5 (259-344)||(15972556-15972642)
chr5 (253-332)||(19241299-19241380)
chr5 (272-332)||(25670913-25670974)
chr5 (272-346)||(27407738-27407814)
chr5 (253-332)||(27942474-27942555)
chr5 (272-332)||(32976583-32976644)
chr5 (272-332)||(40888897-40888958)
chr5 (272-343)||(3454739-3454811)
chr5 (274-346)||(8681282-8681354)
chr5 (274-345)||(12912875-12912946)
chr5 (273-346)||(34918472-34918543)
chr5 (262-338)||(11954769-11954846)
chr5 (272-332)||(13479831-13479892)
chr5 (253-339)||(27407042-27407131)
chr5 (272-332)||(42807007-42807068)
chr5 (253-339)||(37882432-37882517)
chr5 (253-346)||(4938168-4938263)
chr5 (276-329)||(7651010-7651064)
chr5 (272-332)||(29619021-29619082)
chr5 (272-332)||(30648120-30648181)
chr5 (273-332)||(36572427-36572487)
chr5 (274-313)||(39238419-39238458)
chr5 (253-339)||(42608045-42608132)
chr5 (272-332)||(23089521-23089582)
chr5 (272-332)||(31008392-31008453)
chr5 (254-338)||(34529384-34529469)
chr5 (273-324)||(42317892-42317944)
chr5 (273-316)||(23649192-23649235)
chr5 (273-316)||(23809336-23809379)
chr5 (272-329)||(34709880-34709938)
chr5 (272-309)||(4219472-4219509)
chr5 (272-313)||(39008483-39008524)
[»] chr6 (20 HSPs)
chr6 (263-346)||(6380483-6380566)
chr6 (263-345)||(29428513-29428596)
chr6 (276-330)||(32359753-32359807)
chr6 (272-340)||(6725625-6725693)
chr6 (263-332)||(631511-631582)
chr6 (252-332)||(8660541-8660623)
chr6 (263-332)||(34328274-34328345)
chr6 (265-332)||(34838576-34838645)
chr6 (241-332)||(22627807-22627899)
chr6 (263-332)||(197797-197868)
chr6 (272-332)||(10883875-10883936)
chr6 (272-332)||(12501835-12501896)
chr6 (263-316)||(17961288-17961342)
chr6 (253-332)||(8669873-8669954)
chr6 (272-332)||(12512916-12512977)
chr6 (272-332)||(24348436-24348497)
chr6 (276-332)||(30446251-30446308)
chr6 (272-332)||(12480320-12480381)
chr6 (288-339)||(8218964-8219016)
chr6 (255-337)||(24933286-24933369)
[»] chr2 (34 HSPs)
chr2 (263-346)||(9074219-9074302)
chr2 (232-345)||(927887-928000)
chr2 (258-346)||(37245491-37245580)
chr2 (228-346)||(1987076-1987198)
chr2 (262-346)||(38901714-38901799)
chr2 (251-339)||(14152068-14152158)
chr2 (263-332)||(12855014-12855085)
chr2 (263-332)||(24997075-24997146)
chr2 (263-332)||(30822591-30822662)
chr2 (276-346)||(31192978-31193048)
chr2 (272-345)||(2780732-2780805)
chr2 (251-346)||(13151478-13151575)
chr2 (263-329)||(8852052-8852120)
chr2 (254-332)||(22351622-22351702)
chr2 (263-338)||(39434014-39434090)
chr2 (254-332)||(43021727-43021807)
chr2 (263-332)||(4296779-4296850)
chr2 (263-346)||(36855768-36855851)
chr2 (254-322)||(6333396-6333465)
chr2 (272-332)||(17485822-17485883)
chr2 (272-339)||(31174187-31174253)
chr2 (265-350)||(36209465-36209551)
chr2 (228-344)||(5146707-5146824)
chr2 (252-344)||(6362938-6363031)
chr2 (253-314)||(7588531-7588593)
chr2 (265-332)||(7763495-7763564)
chr2 (272-332)||(39490148-39490209)
chr2 (272-332)||(1073091-1073152)
chr2 (272-324)||(14382972-14383025)
chr2 (272-316)||(36526826-36526870)
chr2 (255-313)||(1308725-1308784)
chr2 (272-332)||(9117817-9117878)
chr2 (276-313)||(17929283-17929320)
chr2 (272-324)||(44279997-44280050)
[»] scaffold0100 (1 HSPs)
scaffold0100 (231-346)||(30532-30648)
[»] scaffold0012 (1 HSPs)
scaffold0012 (230-339)||(123977-124084)
[»] scaffold0054 (1 HSPs)
scaffold0054 (272-332)||(57750-57811)
[»] scaffold0016 (1 HSPs)
scaffold0016 (274-332)||(66079-66138)
[»] scaffold0362 (1 HSPs)
scaffold0362 (272-332)||(5330-5391)
[»] scaffold0007 (1 HSPs)
scaffold0007 (275-315)||(170661-170701)


Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 45685577 - 45685363
Alignment:
Q  18 atttttgagagggggcttatgctaggagtccacattctctcatgtggatttcctgaacaaagttggcatactcccaagtatcagtgaccttttctcaatc 117  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45685577 atttttgagagggggcttatgctaggagtacacatcctctcatgtggatttcctgaacaaagttggcatactcccaagtatcagtgaccttttctcaatc 45685478  T
Q  118 ttgaagcatctcatctcatgttcctagttttgaaccttgcatgatcataattatgaggtcctctgaaagaattggcaggagtggtcttctctttctttga 217  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45685477 ttgaagtatctcatctcatgttcctagttttgaaccttgcatgatcataattatgaggtcctctgaaagaattggcaggagtggtcttctctttctttga 45685378  T
Q  218 agcctccgcttaaga 232  Q
    |||||||||||||||    
T  45685377 agcctccgcttaaga 45685363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 346
Target Start/End: Complemental strand, 47750335 - 47750219
Alignment:
Q  230 agaccatccctaatggtttttaccattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcat 328  Q
    |||| ||||| |||||||| |||||||||||| ||||||||| |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||    
T  47750335 agacaatccccaatggtttataccattcaacaccattcaacatccactttttcaattccca-cactccacgtcattttctctctcttattcaacactcat 47750237  T
Q  329 tcaacatttactctctcc 346  Q
    ||||| ||||| ||||||    
T  47750236 tcaacttttaccctctcc 47750219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 31848851 - 31848768
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31848851 cattcaacaccattttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctcc 31848768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 53184173 - 53184090
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| || || ||||||    
T  53184173 cattcaacaccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaactttaaccctctcc 53184090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 54356964 - 54356891
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctc 345  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  54356964 ccactttttcaattcccaacactccacatcattttctttctcttattcaacacacattcaacttttactctctc 54356891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 39113843 - 39113756
Alignment:
Q  253 cattcaacatcattcaacacca-ctttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||||| || ||||||| | |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||    
T  39113843 cattcaacaacactcaacactaactttttcaattcccaacactccacatcattttctctcttttattcaacactcattcaacttttac 39113756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 338
Target Start/End: Original strand, 12158142 - 12158208
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacattta 338  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  12158142 ccacattttcgattcccaacactccacatcattttctctctcttattcaacactcattcaactttta 12158208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 6290584 - 6290665
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  6290584 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 6290665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 34199357 - 34199276
Alignment:
Q  253 cattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  34199357 cattcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 34199276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 40721019 - 40721100
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||  |||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  40721019 cattcaacaatattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 40721100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 55408636 - 55408563
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||  |||||| || |||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  55408636 cactttttctcttcccagcactccacatcattttctctctcttattcaacactcattcaacttttactatctcc 55408563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 3533394 - 3533314
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  3533394 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 3533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 2215360 - 2215289
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  2215360 cattcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaa 2215289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 46917589 - 46917518
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  46917589 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 46917518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 39049151 - 39049077
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| |||| |||||| ||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||    
T  39049151 ccacttttttaatttccaacactccacatcattttctctttcttattcaacattcattcaacttttaccctctcc 39049077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 8991767 - 8991848
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| | ||||||||| ||||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  8991767 cattcaacaaccttcaacacccactttttgaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 8991848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 33523274 - 33523335
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  33523274 ccactttttcaattcccaacattccacatcattttctctctcttaattcaacatccattcaa 33523335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 33604661 - 33604722
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||    
T  33604661 ccactttttcaattcccaacactccacatcattttctctatcttaattcaacactcattcaa 33604722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 35809167 - 35809228
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  35809167 ccactttttcaattcccaacattccacatcattttctctctcataattcaacacccattcaa 35809228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 38173559 - 38173616
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcat 328  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  38173559 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcat 38173616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 45081480 - 45081419
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  45081480 ccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaa 45081419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 3618540 - 3618468
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    |||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  3618540 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 3618468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 10089842 - 10089925
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||| ||||||||||||  ||| | ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  10089842 cattcaacacccactttttcaattttcaatactccacatcatttt-tctctcttattcaacactcattcaacttttaccctctcc 10089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 228 - 338
Target Start/End: Original strand, 19409091 - 19409201
Alignment:
Q  228 taagaccatccctaatggtttttaccattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactc 326  Q
    ||||| |||| | |||||||||| || ||| ||||||||||||||| |||||||||||| |||| | || |||| |||||||||||||||||||| | ||    
T  19409091 taagatcatctccaatggttttt-cctttcgacatcattcaacacccactttttcaatttccaaaactcaacattattttctctctcttattcaatattc 19409189  T
Q  327 attcaacattta 338  Q
    ||||||| ||||    
T  19409190 attcaactttta 19409201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 39533349 - 39533282
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    |||||||||||||| |||| ||||||| ||||||||||| |||||||||||| ||||||||| |||||    
T  39533349 ccactttttcaatttccaatattccacgtcattttctctttcttattcaacattcattcaacttttac 39533282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 346
Target Start/End: Complemental strand, 40596826 - 40596756
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||  ||||| ||||| ||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  40596826 tttttcaattttcaacactccacgtcattttctctcttttattcaacacttattcaacttttactctctcc 40596756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 28899336 - 28899397
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| |||||||    
T  28899336 ccactttttcaattcccaatattccacatcgttttctctctcttaattcaacacccattcaa 28899397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 33526710 - 33526795
Alignment:
Q  262 tcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||| ||||||||||||||| ||||| |||  |||||||||| ||| |||||||| ||||||||||| ||||| ||||||    
T  33526710 tcattcaacatccactttttcaattctcaacactccgtatcattttctttcttttattcaatactcattcaacttttaccctctcc 33526795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 48506674 - 48506613
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||||    
T  48506674 ccactttttcaattttcaacactccacatcattttctctctcttaattcaacactcattcaa 48506613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 55560547 - 55560494
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  55560547 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 55560494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 56054021 - 56054082
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||||    
T  56054021 ccactttttcaattcccaacactccacatcattttctctctcttaattctacacccattcaa 56054082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 16020832 - 16020912
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| | ||||||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||||||  |||||||    
T  16020832 attcaacaaccttcaacacccactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaa 16020912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 23540513 - 23540433
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| | ||||||||| |||||||||||| |||||| || ||||||||||||||||||| ||||||||| |||||||    
T  23540513 attcaacaaccttcaacacccactttttcaatttccaacactcaacatcattttctctctcttaattcaacacccattcaa 23540433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 48403967 - 48403907
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||| |||||| |||||||||||||||||||| | |||||||||||||||||    
T  48403967 cactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaa 48403907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 4981495 - 4981554
Alignment:
Q  255 ttcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctc 313  Q
    ||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  4981495 ttcaatatccttcaacacccactttttcaattcccaacactccacatcattttctctctc 4981554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 36656554 - 36656636
Alignment:
Q  262 tcattcaacac-cactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||| || |||||||||||   ||| ||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||    
T  36656554 tcattcaacactcattttttcaattc---acactccacatcattttctctctcttaatcaatactcattcaacttttacactctcc 36656636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 52017350 - 52017409
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||||    
T  52017350 actttttcaattcctaacactcaacatcattttctctctcttaattcaacactcattcaa 52017409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 53348129 - 53348054
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||||  ||||||| |||||||||||||||||| |||||||||| ||||| ||| ||||| ||||||    
T  53348129 ccactttttcaattatcaacatttcacatcattttctctctctttattcaacagtcatttaacttttaccctctcc 53348054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 56003 - 55933
Alignment:
Q  253 cattcaacatcattcaacac-cactttttcaattcccaacattccacatcattttctctctcttattcaac 322  Q
    ||||||||| |||| ||||| ||||||||||||| |||||| ||| ||||||||||| |||||||||||||    
T  56003 cattcaacaccattgaacactcactttttcaatttccaacactccgcatcattttctttctcttattcaac 55933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 13094454 - 13094397
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||    
T  13094454 tttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaa 13094397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 13110565 - 13110626
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||| |||||| |||||||| ||||||||| |||||||    
T  13110565 ccactttttcaattcccaacactccacaacattttttctctcttaattcaacacccattcaa 13110626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 23390005 - 23389936
Alignment:
Q  265 ttcaacac-cactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||||||| | |||||| ||||||||||    
T  23390005 ttcaacactcactttttcaattcccaacactccacattattttctctctcataattcaatactcattcaa 23389936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 344
Target Start/End: Original strand, 51392215 - 51392305
Alignment:
Q  253 cattcaacatcattcaacac-cactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctct 344  Q
    |||||||||| ||||||||| |||||||| ||||| ||||| ||||||||||||  | |||||||||||||| || |||||| ||||| ||||    
T  51392215 cattcaacattattcaacacacacttttttaattctcaacactccacatcattt--tttctcttattcaacattcgttcaacttttaccctct 51392305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 33077941 - 33077881
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaa 332  Q
    |||||||||||||| |||||| ||||||||||||||||||| | ||| ||||| |||||||    
T  33077941 ccactttttcaatttccaacactccacatcattttctctctttaatttaacacccattcaa 33077881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 19272789 - 19272828
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctc 313  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  19272789 actttttcaattcccaacactccacatcattttctctctc 19272828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 34464100 - 34464038
Alignment:
Q  264 attcaacacca-ctttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    ||||||||||| |||||| |||| |||||||| |||||||||||||||||||| |||||||||    
T  34464100 attcaacaccaacttttttaatttccaacatttcacatcattttctctctcttaattcaacac 34464038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 17329980 - 17329940
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc 313  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  17329980 ccactttttcaattcc-aacattccacatcattttctctctc 17329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 344
Target Start/End: Original strand, 34564108 - 34564200
Alignment:
Q  253 cattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctct 344  Q
    |||||||||| |||||||| ||| ||||| ||||| ||||| |  | || |||||||||||||||||||||| ||||| ||| ||||| ||||    
T  34564108 cattcaacattattcaacatccatttttttaattctcaacactttatattattttctctctcttattcaacattcatttaacttttaccctct 34564200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 18469435 - 18469402
Alignment:
Q  273 cactttttcaattcccaacattccacatcatttt 306  Q
    |||||||||||||||||||| |||||||||||||    
T  18469435 cactttttcaattcccaacactccacatcatttt 18469402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 31336418 - 31336369
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    ||||||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  31336418 tttttcaattctcaacactccacgtcattttctctctcttaattcaacac 31336369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 16175102 - 16175030
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    |||||||| | ||||||||| | ||||||||||  ||||| |||||||||||||||| ||||| |||||||||    
T  16175102 attcaacaaccttcaacacccattttttcaattttcaacactccacatcattttctcactcttaattcaacac 16175030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 227 - 346
Target Start/End: Original strand, 22191179 - 22191298
Alignment:
Q  227 ttaagaccatccctaatggtttttaccattcaacatcattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactc 326  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  22191179 ttaagaccatccctaatggtttttaccattcaacaccattcaacaccactttttcaatttccaacactccacatcattttctctctcttattcaacactc 22191278  T
Q  327 attcaacatttactctctcc 346  Q
    ||||||| ||||| ||||||    
T  22191279 attcaacttttaccctctcc 22191298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 21654841 - 21654924
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21654841 cattcaacaccactttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctcc 21654924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 48984902 - 48984978
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  48984902 cattcaacaccactttttcaatttccaacgctccacatcattttctctctcttattcaacactcattcaacatttac 48984978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 30630891 - 30630808
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||    
T  30630891 cattcaacaccacttttttaattcccaacactccacattattttctctctcttattcaatactcattcaacttttactctctcc 30630808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 339
Target Start/End: Complemental strand, 22737682 - 22737596
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||    
T  22737682 attcaacagcattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaacttttac 22737596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 35029187 - 35029116
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35029187 cattcaacacctactttttcaattcccaacattccacatcattttctctctcttaattcaacactcattcaa 35029116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 346
Target Start/End: Original strand, 24793464 - 24793569
Alignment:
Q  241 aatggtttttaccattcaacatcattcaacaccac-tttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    |||||||||| || ||||||| ||||||||||| | |||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||| |||||    
T  24793464 aatggttttt-cctttcaacaccattcaacaccccctttttcaagtcccaacactccaaatcattttctctttcttattcaacactcattcaacttttac 24793562  T
Q  340 tctctcc 346  Q
     ||||||    
T  24793563 actctcc 24793569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 43571162 - 43571088
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  43571162 ccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctcc 43571088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 35193205 - 35193120
Alignment:
Q  255 ttcaacatcattcaacac-cactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||||| |||||    
T  35193205 ttcaacattattcaacactcactttttcaattcccaacactccacataattttctttctattattcaacactcattcaacttttac 35193120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 36518519 - 36518580
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  36518519 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaa 36518580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 272 - 338
Target Start/End: Original strand, 114494 - 114560
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacattta 338  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  114494 ccactttttaaattctcaacactccacatcattttctctctcttattcaacactcatttaactttta 114560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 30566604 - 30566665
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  30566604 ccactttttcaattctcaacactccacatcattttctctctcttaattcaacactcattcaa 30566665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 40302555 - 40302498
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  40302555 tttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaa 40302498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 5813092 - 5813163
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||    
T  5813092 cattcaacacccactttttcaattcccaacactgcacatcattttctctctcttaattcaacacttattcaa 5813163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 25038661 - 25038587
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| |||||||| || | |||||||||||||||||||||||| ||||||||||||  ||||| ||||||    
T  25038661 ccacttttttaattcccagcacttcacatcattttctctctcttattcgacactcattcaagttttaccctctcc 25038587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 25218876 - 25218802
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||| |||||| | || ||||||||||||||||||||||| ||||||| ||| ||||| ||||||    
T  25218876 ccactttttcaatttccaacacttcatatcattttctctctcttattcaatactcatttaacttttaccctctcc 25218802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 39769733 - 39769794
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    |||||||||||||| |||||| |||||||||||||||||||| | |||||||||||||||||    
T  39769733 ccactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaa 39769794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 42881362 - 42881415
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  42881362 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 42881415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 47159582 - 47159502
Alignment:
Q  253 cattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| | ||||||| ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  47159582 cattcaacaaccttcaacatccacttttt-aattcccaacactccacatcattttctctctcttaattcaacacccattcaa 47159502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 332
Target Start/End: Original strand, 30720117 - 30720185
Alignment:
Q  266 tcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||    
T  30720117 tcaacacctactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaa 30720185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 38970017 - 38970104
Alignment:
Q  255 ttcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctct--ctcttattcaacactcattcaacatttac 339  Q
    ||||||| | ||||||||| |||||||||||| |||||| ||||||||||||| | |  ||||||||||||||||||||||| |||||    
T  38970017 ttcaacacctttcaacacccactttttcaatttccaacactccacatcatttttttttcctcttattcaacactcattcaacttttac 38970104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 26013258 - 26013193
Alignment:
Q  280 tcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||| |||||| |||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  26013258 tcaatttccaacactccatatcattttctctctctt-ttcaatactcattcaacttttactctctcc 26013193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 43202239 - 43202150
Alignment:
Q  241 aatggtttttaccattcaacatcattcaaca-ccactttttcaattcccaa-cattccacatcattttctctctcttattcaacactcatt 329  Q
    |||||||||| ||||||||||  |||||||| ||||||||||||| ||||| || | ||||| ||||||||||||||| ||||||||||||    
T  43202239 aatggttttt-ccattcaacaaaattcaacatccactttttcaatgcccaatcacttcacattattttctctctcttactcaacactcatt 43202150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 45549688 - 45549626
Alignment:
Q  271 accactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    |||||||||||||||||||||| ||||||||||||| |||||| | ||||||||| |||||||    
T  45549688 accactttttcaattcccaacactccacatcattttttctctcataattcaacacccattcaa 45549626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 28318111 - 28318058
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  28318111 ccacttttttaattcccaacactccacatcattttctctctcttaattcaacac 28318058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 33078853 - 33078792
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| ||||| | |||||||||||||| |||||||| ||||||||    
T  33078853 ccactttttcaattcccaacactccacgttattttctctctcttaattcaacattcattcaa 33078792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 33508590 - 33508533
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||| || || |||||||||||||||| |||||||||||||||||    
T  33508590 tttttcaattcccaacactctacgtcattttctctctcttaattcaacactcattcaa 33508533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 37951731 - 37951814
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcatttt--ctctctctt-attcaacactcattcaa 332  Q
    ||||||||| | ||||||||| ||||||||||||||||||| |||| ||||||||  ||||||||| ||||||||| |||||||    
T  37951731 cattcaacaaccttcaacacctactttttcaattcccaacactccatatcattttccctctctcttaattcaacacccattcaa 37951814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 32130339 - 32130298
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc 313  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  32130339 ccacttttttaattcccaacactccacatcattttctctctc 32130298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 32748805 - 32748862
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||| ||||||| |||||||||||| | ||| |||||||||||||    
T  32748805 tttttcaattcccaacactccacattattttctctctcataatttaacactcattcaa 32748862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 37887855 - 37887895
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctctta 316  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  37887855 tttttcaattcccaacactccacatcattttatctctctta 37887895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 20354219 - 20354288
Alignment:
Q  265 ttcaacacc-actttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||| |||||||||||||| |||| ||||||||||||| ||| || | ||||||||| |||||||    
T  20354219 ttcaacacctactttttcaattcctaacactccacatcattttttctatcataattcaacacccattcaa 20354288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 25832834 - 25832725
Alignment:
Q  230 agaccatccctaatggtttttaccattcaacatcattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcatt 329  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  25832834 agaccatccttaatggtttttaccattcaacaccattcaacaccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcatt 25832735  T
Q  330 caacatttac 339  Q
    |||| |||||    
T  25832734 caacttttac 25832725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 230 - 346
Target Start/End: Original strand, 41890497 - 41890613
Alignment:
Q  230 agaccatccctaatggtttttaccattcaacatcattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcatt 329  Q
    |||||||||  ||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41890497 agaccatccacaatggttttcaccattcaacaccattcaacatcactttttcaattcccaacactccacatcattttctctctcttattcaacactcatt 41890596  T
Q  330 caacatttactctctcc 346  Q
    |||| ||||| ||||||    
T  41890597 caacttttaccctctcc 41890613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 228 - 339
Target Start/End: Original strand, 42601722 - 42601833
Alignment:
Q  228 taagaccatccctaatggtttttaccattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactc 326  Q
    |||||||||| | |||||||||| || ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42601722 taagaccatctccaatggttttt-cctttcaacaccattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactc 42601820  T
Q  327 attcaacatttac 339  Q
    ||||||| |||||    
T  42601821 attcaacttttac 42601833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 42601582 - 42601499
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  42601582 cattcaacaccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 42601499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 51427096 - 51427172
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  51427096 cattcaacaccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 51427172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 33934987 - 33935070
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  33934987 cattcaacaccactttttcaattcccaacactccacatcattttctctctcttattcaacactcaatcaacttttaccctctcc 33935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 46573013 - 46572919
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  46573013 cattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaagactcattcaacttttaccctctcc 46572919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 49823271 - 49823171
Alignment:
Q  230 agaccatccctaatggtttttaccattcaacatcattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcatt 329  Q
    |||||||||| |||||||||||||||||||         |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49823271 agaccatccccaatggtttttaccattcaa---------acaccactttttcaattcccaacactccacatcattttctctctcttattcaacactcatt 49823181  T
Q  330 caacatttac 339  Q
    |||| |||||    
T  49823180 caacttttac 49823171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 274 - 339
Target Start/End: Complemental strand, 49147354 - 49147289
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  49147354 actttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 49147289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 49357572 - 49357491
Alignment:
Q  265 ttcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||| |||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  49357572 ttcaacaccacttttttaattcctaacatttcatatcattttctctctcttattcaacactcattcaacttttaccctctcc 49357491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 50033657 - 50033746
Alignment:
Q  258 aacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||| ||||||||| ||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  50033657 aacaccattcaacatccacttttttaatttccaacattctacatcattttttctctcttattcaacactcattcaacttttactctctcc 50033746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 37410504 - 37410413
Alignment:
Q  255 ttcaacatcattcaacacca-ctttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||| ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  37410504 ttcaacat-attcaacaccatctttttcaattcccaatactccacatcattttctctctcttattcaacattcattcaacttttaccctctcc 37410413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 35853260 - 35853186
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  35853260 ccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctcc 35853186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 49710457 - 49710383
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  49710457 ccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctcc 49710383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 138958 - 139055
Alignment:
Q  251 accattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttactctctcc 346  Q
    ||||||||||| || |||||| || |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||| ||||| ||||||    
T  138958 accattcaacaacactcaacatccgctttttcaattcccaacactccacatcattttgtctctcttaattcaacactcattcaacttttaccctctcc 139055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 35424088 - 35424004
Alignment:
Q  262 tcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctc 345  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| |||||    
T  35424088 tcattcaacatccattttttcaattcccaacactccacatcattttttctctcttattcaacactcattcgacttttaccctctc 35424004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 43022653 - 43022721
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttact 340  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  43022653 ccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttact 43022721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 25790853 - 25790782
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  25790853 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaa 25790782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 272 - 339
Target Start/End: Original strand, 50017058 - 50017125
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| |||||    
T  50017058 ccactttttcaattcccaacactctacatcattttctctttcttattcaacactcattcaacttttac 50017125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 29701667 - 29701748
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  29701667 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 29701748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 47701153 - 47701056
Alignment:
Q  251 accattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttct-ctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||| |||||| || |||||||| ||||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||    
T  47701153 accaatcaacaacactcaacacccactttttcaattctcaacactccacatcatttttttctctcttattcaacactcattaaacttttactctctcc 47701056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 6048783 - 6048703
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  6048783 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 6048703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 25450712 - 25450636
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacattta 338  Q
    ||||||||||| | ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||| ||||    
T  25450712 cattcaacacccattttttcaattcccaacgctccacatcattttctctctcttattcaacattcattcaactttta 25450636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 42560887 - 42560959
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42560887 attcaacaaccttcaacacccactttttcaattcccaacattccacatcattttctctctcttaattcaacac 42560959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 51999324 - 51999244
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  51999324 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 51999244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 5845218 - 5845147
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  5845218 cattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaa 5845147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 17466510 - 17466581
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  17466510 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 17466581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 47144168 - 47144239
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||    
T  47144168 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacttattcaa 47144239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 339
Target Start/End: Original strand, 20139343 - 20139433
Alignment:
Q  251 accattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttac 339  Q
    ||||||||||| || |||| ||| ||||||||||||| ||||| | |||||||||||||||||||| |||||||||||||||||| |||||    
T  20139343 accattcaacaacactcaatacccactttttcaattctcaacacttcacatcattttctctctcttaattcaacactcattcaacttttac 20139433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 30418497 - 30418436
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  30418497 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 30418436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 33748680 - 33748757
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||||||| | |||||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||| |||||    
T  33748680 cattcaacacctattttttcaatttccaacactccacatcattttctctcttttactcaacactcattcaacttttac 33748757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 33795575 - 33795491
Alignment:
Q  258 aacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctct 344  Q
    |||| ||||||||| ||||||||| ||||||||||| |||   ||||||||||| |||||||||||||||||||||| ||||||||||    
T  33795575 aacaccattcaacatccacttttttaattcccaacaatcc---tcattttctctttcttattcaacactcattcaacttttactctct 33795491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 43473895 - 43473956
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||    
T  43473895 ccactttttcaattcccaacattccagatcattttctctctcttaattcaacacccattcaa 43473956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 50415918 - 50415837
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| | ||||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||    
T  50415918 cattcaacaaccttcaacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaa 50415837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 4045966 - 4046038
Alignment:
Q  254 attcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    |||||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  4045966 attcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 4046038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 331
Target Start/End: Original strand, 12974673 - 12974733
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattca 331  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  12974673 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattca 12974733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 32120525 - 32120453
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    |||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  32120525 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 32120453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 44084295 - 44084367
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    |||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  44084295 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 44084367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 7521202 - 7521143
Alignment:
Q  275 ctttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaaca 334  Q
    ||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||    
T  7521202 ctttttcaatttccaacacttcagatcattttctctctcttattcaacactcattcaaca 7521143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 339
Target Start/End: Original strand, 28410399 - 28410466
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||||||  ||||||||| ||||| ||||||||||||| |||||||||||||||||||| |||||    
T  28410399 ccactttttctcttcccaacactccacgtcattttctctcttttattcaacactcattcaacttttac 28410466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 6832389 - 6832450
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| ||||||||||||||| ||| || |||||||||||||||||    
T  6832389 ccactttttcaattcccaacactccacatcattttctttcttttaattcaacactcattcaa 6832450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 26165622 - 26165561
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||    
T  26165622 ccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaa 26165561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 41183279 - 41183332
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  41183279 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 41183332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 37183904 - 37183844
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||| |||| |||||||||||||||||||||| ||||||||| |||||||    
T  37183904 cactttttcaattcctaacactccacatcattttctctctcttaattcaacacccattcaa 37183844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 332
Target Start/End: Original strand, 46123924 - 46123992
Alignment:
Q  266 tcaacacc-actttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||||| | |||||||||||||||||    
T  46123924 tcaacacctactttttcaatttccaacattctacatcattttctctctcataattcaacactcattcaa 46123992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 50176149 - 50176085
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttact 340  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||| |  ||||||| ||||||    
T  50176149 tttttcaattcccaacactccacatcattttatctctcttattcaacgcatattcaacttttact 50176085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 27847414 - 27847472
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcatt 329  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||||||||| ||||    
T  27847414 ccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccatt 27847472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 15493885 - 15493823
Alignment:
Q  275 ctttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    |||||||||||||||||| ||||||||| ||  |||||||||||||||| ||||||||| |||||    
T  15493885 ctttttcaattcccaacactccacatcactt--tctctcttattcaacattcattcaacttttac 15493823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 7008060 - 7008115
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactc 326  Q
    |||||||||||||| |||||| || ||||||||||||||||||| |||||||||||    
T  7008060 ccactttttcaatttccaacactctacatcattttctctctcttaattcaacactc 7008115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 10426518 - 10426459
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctct 312  Q
    |||||||| | ||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  10426518 attcaacaaccttcaacacccattttttcaattcccaacactccacatcattttctctct 10426459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 346
Target Start/End: Complemental strand, 30862838 - 30862791
Alignment:
Q  299 atcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||||||||||||||||||||| || |||||| ||||||    
T  30862838 atcattttctctctcttattcaacactcatttaatatttaccctctcc 30862791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 11908024 - 11908085
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    |||||||||||||| |||||| ||||||||||||| |||||| | ||||||||| |||||||    
T  11908024 ccactttttcaatttccaacactccacatcattttttctctcataattcaacacccattcaa 11908085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 35472694 - 35472653
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc 313  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  35472694 ccactttttcaattcccaacactccacattattttctctctc 35472653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 744225 - 744265
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctctta 316  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  744225 tttttcaattaccaacactccacatcattttctctctctta 744265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 36178791 - 36178731
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctc 313  Q
    |||||||| | ||||||||| ||||||||||||||||||| | || |||||||||||||||    
T  36178791 attcaacacccttcaacacccactttttcaattcccaacacttcaaatcattttctctctc 36178731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 50734021 - 50734065
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctta 316  Q
    |||||||||||||| |||| | |||||||||||||||||||||||    
T  50734021 ccactttttcaatttccaaaactccacatcattttctctctctta 50734065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 50778834 - 50778790
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctta 316  Q
    |||||||||||||| |||| | |||||||||||||||||||||||    
T  50778834 ccactttttcaatttccaaaactccacatcattttctctctctta 50778790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 315
Target Start/End: Original strand, 42258322 - 42258365
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt 315  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||    
T  42258322 ccactttttctcttcccaacactccacatcattttctctctctt 42258365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 49407405 - 49407338
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    |||||||||||||| | |||| | ||| | ||||||||||| |||||||| ||||||||||| |||||    
T  49407405 ccactttttcaatttcgaacacttcaccttattttctctcttttattcaatactcattcaacttttac 49407338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 38572220 - 38572178
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctctta 316  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||    
T  38572220 actttttcaattctcaacactccacattattttctctctctta 38572178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 28155296 - 28155235
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    |||||||||||||| | |||| || |||| |||||||||||| | |||||||||||||||||    
T  28155296 ccactttttcaatttctaacactctacataattttctctctcataattcaacactcattcaa 28155235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 52000126 - 52000089
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctc 313  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  52000126 ttttttaattcccaacactccacatcattttctctctc 52000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 55026748 - 55026805
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||  ||||| | ||| |||||||||||||||| |||||||||||||||||    
T  55026748 tttttcaattttcaacacttcacttcattttctctctcttaattcaacactcattcaa 55026805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 228 - 346
Target Start/End: Complemental strand, 34955778 - 34955660
Alignment:
Q  228 taagaccatccctaatggtttttaccattcaacatcattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactca 327  Q
    |||||||||||| ||||||||||  | ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34955778 taagaccatccccaatggtttttttctttcaacaccattcaacaccactttttcaattcccaacactccacatcattttctctctcttattcaacactca 34955679  T
Q  328 ttcaacatttactctctcc 346  Q
    |||||| ||||| ||||||    
T  34955678 ttcaacttttaccctctcc 34955660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 228 - 346
Target Start/End: Complemental strand, 26632266 - 26632147
Alignment:
Q  228 taagaccatccctaatggtttttaccattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactc 326  Q
    |||||||||||  ||||||||  ||||||||||| ||||||||||| |||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  26632266 taagaccatcctcaatggtttacaccattcaacaccattcaacacccactttttcaattcccaacacgccacgtcattttctctctcttattcaacactc 26632167  T
Q  327 attcaacatttactctctcc 346  Q
    ||||||| ||||||||||||    
T  26632166 attcaacttttactctctcc 26632147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 344
Target Start/End: Complemental strand, 30470929 - 30470814
Alignment:
Q  230 agaccatccctaatggtttttaccattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcat 328  Q
    |||||||||| ||||||||  ||||||||||| ||||||| | ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  30470929 agaccatccccaatggtttacaccattcaacaccattcaagatccattttttcaattcccaacactccacgtcattttctctctcttattcaacactcat 30470830  T
Q  329 tcaacatttactctct 344  Q
    ||||| ||||||||||    
T  30470829 tcaacttttactctct 30470814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 5212285 - 5212368
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  5212285 cattcaacaccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 5212368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 42860708 - 42860783
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacattta 338  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  42860708 cattcaacaccactttttcaattcccaacactccacatcattttctctttcttattcaacactcattcaacattta 42860783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 18029587 - 18029493
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  18029587 cattcaacaccattcgacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 18029493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 36912401 - 36912494
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  36912401 attcaacaccattcaacacccactttttcaattcccaacactctacatcattttctctctcttattcaacactcattcaacttttaccctctcc 36912494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 13814942 - 13815024
Alignment:
Q  264 attcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  13814942 attcaacactactttttcaatttccaacactccacatcattttctctctcttattcaacactaattcaacatttaccctctcc 13815024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 41477168 - 41477253
Alignment:
Q  255 ttcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||    
T  41477168 ttcaacaccattcaacatccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttac 41477253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 38584982 - 38584895
Alignment:
Q  253 cattcaacatcattcaacac-cactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| |||||    
T  38584982 cattcaacaccattcaacacacactttttcaattcccaacactccacgtcattttctctctcttattcaacactcgttcaacttttac 38584895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 346
Target Start/End: Complemental strand, 8610068 - 8609975
Alignment:
Q  254 attcaacatcattcaacac-cactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||| |||||||||  |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||| ||||||    
T  8610068 attcaacaccattcaacattcactttttcaattcccaacactccatatcattttctctcttttattcaacactcattcaacttttaccctctcc 8609975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 4625580 - 4625496
Alignment:
Q  255 ttcaacatcattcaacac-cactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacattta 338  Q
    ||||||| |||||||||| |||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| ||||    
T  4625580 ttcaacaccattcaacactcactttttcaattcccaacactccaaattattttctctctcttattcaacactcattcaactttta 4625496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 17741705 - 17741789
Alignment:
Q  263 cattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  17741705 cattcaacatccactttttcaattcccaagactccacatcattttctctctcttattcaatactcattcaacttttaccctctcc 17741789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 5735281 - 5735364
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||||||||||  ||| | || ||||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  5735281 cattcaacaccactttttcaattttcaatactcgacatcattttctctctcttattcaacactcattcaatttttaccctctcc 5735364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 35099426 - 35099499
Alignment:
Q  261 atcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  35099426 atcattcaacacccactttttcaattcccaacactctacatcattttctctctcttaattcaacactcattcaa 35099499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 42859929 - 42859989
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  42859929 cactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaa 42859989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 39811147 - 39811052
Alignment:
Q  253 cattcaacatcattcaacacc-actttttc-aattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| ||||||||||| |||||||  |||||| | || ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  39811147 cattcaacaccattcaacacccactttttttaattcctagcactccacatcattttatctctcttattcaacactcattcaacttttaccctctcc 39811052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 1958248 - 1958187
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  1958248 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 1958187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 43524459 - 43524398
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  43524459 ccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaa 43524398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 45101093 - 45101032
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  45101093 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 45101032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 31129591 - 31129503
Alignment:
Q  253 cattcaacatcattcaacacca-ctttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttac 339  Q
    |||| |||| || ||||||||| |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||||||| |||||    
T  31129591 catttaacaacactcaacaccaactttttcaattctcaacactccacatcattttctctctcttaattcgacactcattcaacttttac 31129503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 346
Target Start/End: Complemental strand, 30289794 - 30289724
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  30289794 tttttcaattctcaacactctacatcattttctctctcttattcaatacacattcaacttttaccctctcc 30289724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 15053635 - 15053696
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| |||||||    
T  15053635 ccactttttcaattcccaacactccgcatcattttctctctcttaattcaacacccattcaa 15053696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 40283478 - 40283539
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||    
T  40283478 ccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaa 40283539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 43525157 - 43525096
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||| |||||| ||||||||||||||||||| || |||||||||||||||||    
T  43525157 ccactttttcaatttccaacactccacatcattttctctcttttaattcaacactcattcaa 43525096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 26244501 - 26244561
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    |||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||    
T  26244501 cactttttcaattcccaacactccacatcattttctctctcataattcaacacacattcaa 26244561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 344
Target Start/End: Complemental strand, 29637219 - 29637151
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctct 344  Q
    |||||||||| |||||| ||||||| ||||||||| ||||||| |||||||||||||| ||||| ||||    
T  29637219 tttttcaatttccaacactccacataattttctctttcttatttaacactcattcaacttttaccctct 29637151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 35931846 - 35931918
Alignment:
Q  254 attcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    |||||||| | ||||||| |||||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  35931846 attcaacaaccttcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacac 35931918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 43618427 - 43618356
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||| ||||||||  |||||||    
T  43618427 cattcaacacccactttatcaattcccaacactccacatcattttctctctcttaattcaacatccattcaa 43618356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 7990414 - 7990508
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| ||||||||||| ||| ||| ||||  ||||| ||||| | ||||| | |||||||||||||||||||||||| ||||| ||||||    
T  7990414 cattcaacaacattcaacacccactattttaattttcaacactccacgttattttttttctcttattcaacactcattcaacttttaccctctcc 7990508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 12272550 - 12272489
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||| |||||||||||||||||    
T  12272550 ccactttttcaattttcaacactccacttcattttctctctcttaattcaacactcattcaa 12272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 13947361 - 13947430
Alignment:
Q  265 ttcaacacc-actttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| |||| | ||||||||| |||||||    
T  13947361 ttcaacacctactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaa 13947430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 23353251 - 23353190
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaac 333  Q
    |||||||||||||| |||||| ||||||||  ||||||||||||||| |||| |||||||||    
T  23353251 ccactttttcaatttccaacactccacatccctttctctctcttatttaacattcattcaac 23353190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 44503171 - 44503231
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||||||||| ||||| |||||||||||||||| ||| ||||| |||||||    
T  44503171 cactttttcaattcccaacactccacgtcattttctctctcttaattgaacacccattcaa 44503231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 24431951 - 24431860
Alignment:
Q  253 cattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||||||||| ||||||||||||||  ||||| |||| |||| ||  |||||||||||||| ||| ||||||| ||||| ||||||    
T  24431951 cattcaacatcattcaacatccactttttcaattttcaacactccaaatcactt--tctctcttattcaatact-attcaacttttaccctctcc 24431860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 26749486 - 26749404
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctct 344  Q
    ||||||||||| | ||||| ||||| ||||| |||| ||||||||||| || |||||||||| ||||||||| ||||| ||||    
T  26749486 cattcaacacccatttttttaattctcaacactccatatcattttctcccttttattcaacattcattcaacttttaccctct 26749404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 30532516 - 30532456
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaac 333  Q
    |||||||||||||| |||| |||  ||||||||||||||| |||||||||| |||||||||    
T  30532516 actttttcaattcctaacactccgtatcattttctctctctttattcaacattcattcaac 30532456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 1634904 - 1634849
Alignment:
Q  277 ttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattca 331  Q
    |||||||||| ||||| |||||||||||||||||||| | ||||||||| ||||||    
T  1634904 ttttcaattctcaacactccacatcattttctctctcataattcaacacccattca 1634849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 44149865 - 44149911
Alignment:
Q  265 ttcaacac-cactttttcaattcccaacattccacatcattttctct 310  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||    
T  44149865 ttcaacactcacttttttaatttccaacattccacatcattttctct 44149911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 23549720 - 23549777
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||| ||||||  |||||||||||| | ||||||||| |||||||    
T  23549720 tttttcaattcccaacactccacactattttctctctcataattcaacacccattcaa 23549777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 29731698 - 29731758
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||||||| ||||| ||||||| |||||| | ||||||||| |||||||    
T  29731698 ccactttttcaattcccaacactccacgtcatttt-tctctcataattcaacacccattcaa 29731758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 228 - 346
Target Start/End: Original strand, 44651030 - 44651148
Alignment:
Q  228 taagaccatccctaatggtttttaccattcaacatcattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactca 327  Q
    |||||||||||| ||||||||||  | ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44651030 taagaccatccccaatggtttttttctttcaacaccattcaacaccactttttcaattcccaacactccacatcattttctctctcttattcaacactca 44651129  T
Q  328 ttcaacatttactctctcc 346  Q
    |||||| ||||| ||||||    
T  44651130 ttcaacttttaccctctcc 44651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 643899 - 643817
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctc 345  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  643899 cattcaacaccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacatttaccctctc 643817  T

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Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 44451345 - 44451264
Alignment:
Q  265 ttcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  44451345 ttcaacaccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 44451264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 17783368 - 17783452
Alignment:
Q  263 cattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17783368 cattcaacatccacttttttaattcccaacattccacatcattttctctctcttattcaacactcattcaacttttactctctcc 17783452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 44334270 - 44334364
Alignment:
Q  253 cattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||| | ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44334270 cattcaataccattcaacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttactctctcc 44334364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 8464085 - 8464174
Alignment:
Q  258 aacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8464085 aacaccattcaacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaatttttactctctcc 8464174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 41542313 - 41542395
Alignment:
Q  255 ttcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacattta 338  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||  ||||||||||| ||||    
T  41542313 ttcaacatcattcaacatccactttttcaattcccaacactccacatcatattctctctcttattca--actcattcaactttta 41542395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 45239129 - 45239200
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  45239129 cattcaacacccactttttcaattcccaacactccacatcattttctctctctttattcaacactcattcaa 45239200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 346
Target Start/End: Complemental strand, 52933833 - 52933762
Alignment:
Q  275 ctttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  52933833 ctttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactctcc 52933762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 346
Target Start/End: Complemental strand, 52941468 - 52941397
Alignment:
Q  275 ctttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  52941468 ctttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactctcc 52941397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 3755116 - 3755022
Alignment:
Q  253 cattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| |||||| || ||||||||||||||| ||||| || ||||||||||||||||||||||||||| ||| ||||| ||||| ||||||    
T  3755116 cattcaacaccattcagcatccactttttcaattctcaacactctacatcattttctctctcttattcaacattcaatcaacttttaccctctcc 3755022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 44929370 - 44929284
Alignment:
Q  261 atcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||| ||| ||||||||||| ||||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||||    
T  44929370 atcattcaacatccattttttcaattctcaacatttcaaatcattttctctcttttattcaacactcattcaacttttaccctctcc 44929284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 20584945 - 20584853
Alignment:
Q  247 ttttaccattcaacatcattcaacac-cactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacattta 338  Q
    |||| ||||||||||  | ||||||| |||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||| ||||    
T  20584945 tttttccattcaacaaaactcaacacacactttttcaattcccaacactccacatcattttctcactcttatttaacacttattcaactttta 20584853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 48388195 - 48388115
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  48388195 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 48388115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 332
Target Start/End: Original strand, 48404324 - 48404392
Alignment:
Q  266 tcaacacca-ctttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  48404324 tcaacaccaactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaa 48404392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 27630538 - 27630467
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  27630538 cattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaa 27630467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 31468124 - 31468195
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  31468124 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacattcattcaa 31468195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 37420422 - 37420351
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  37420422 cattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaa 37420351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 19578978 - 19578917
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  19578978 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 19578917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 45456219 - 45456158
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  45456219 ccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaa 45456158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 2478415 - 2478343
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    |||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  2478415 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 2478343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 339
Target Start/End: Original strand, 8468325 - 8468393
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttac 339  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||| ||| |||||    
T  8468325 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacatttaacttttac 8468393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 29523686 - 29523765
Alignment:
Q  255 ttcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||  |||||||    
T  29523686 ttcaacacccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacatccattcaa 29523765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 31159390 - 31159449
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  31159390 actttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 31159449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 14096684 - 14096753
Alignment:
Q  265 ttcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| ||||||||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  14096684 ttcaacacctactttttcaattcccaacactccaaatcattttatctctcttaattcaacactcattcaa 14096753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 33164413 - 33164474
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||    
T  33164413 ccactttttcaattcccaacattccagattattttatctctcttaattcaacactcattcaa 33164474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 40500382 - 40500474
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||| |||||| ||||||||| |||| |||| | ||||| |||||||| ||||||||||||||||||| ||| ||||| ||||||    
T  40500382 attcaacatcatttaacacccactttttcagttccgaacacttcacat-attttctccctcttattcaacactcatttaacttttaccctctcc 40500474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 45623596 - 45623520
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttactctctcctatg 350  Q
    |||||||||||||| |||| |||||||||||||||||||||| |||||||||||||| ||  |||| |||||||||||    
T  45623596 actttttcaattcctaacactccacatcattttctctctcttaattcaacactcatttaattttta-tctctcctatg 45623520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 331
Target Start/End: Original strand, 23092770 - 23092830
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattca 331  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||    
T  23092770 ccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattca 23092830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 51494559 - 51494479
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| | ||||||||| ||||||| ||||| ||||| |||||||||||||||||||||| |||||||| ||||||||    
T  51494559 attcaacaaccttcaacacccacttttttaattctcaacactccacatcattttctctctcttaattcaacattcattcaa 51494479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 332
Target Start/End: Complemental strand, 37646626 - 37646567
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  37646626 acttttttaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 37646567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 30878612 - 30878551
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||||||||  |||||||    
T  30878612 ccactttttcaatttccaacactccacatcattttctctctcttaattcaacatccattcaa 30878551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 36230338 - 36230419
Alignment:
Q  253 cattcaacatcattcaacacca-ctttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| |  ||||||||| |||||||||||||||||| | ||||||||||| |||||||| ||||||||| |||||||    
T  36230338 cattcaacaaccctcaacaccaactttttcaattcccaacacttcacatcattttatctctcttaattcaacacccattcaa 36230419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 37822571 - 37822632
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctct-ctctt-attcaacactcattcaa 332  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  37822571 cactttttcaattctcaacactccacatcattttctctcctcttaattcaacactcattcaa 37822632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 37691357 - 37691297
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||||||  |||||||    
T  37691357 cactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaa 37691297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 29919373 - 29919424
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  29919373 actttttcaattcccaacactccatatcattttctctctcttaattcaacac 29919424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 35847207 - 35847128
Alignment:
Q  255 ttcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||| ||| ||||||| ||||||||| |||| |||||| |||||||||||||||||||| | ||||||||| |||||||    
T  35847207 ttcaatatccttcaacatccacttttttaatttccaacactccacatcattttctctctcataattcaacacccattcaa 35847128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 346
Target Start/End: Original strand, 36302987 - 36303057
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||  ||||| ||||||| ||||||||| |||||||||||||  ||||||| ||||| ||||||    
T  36302987 tttttcaattttcaacactccacattattttctctttcttattcaacacatattcaacttttaccctctcc 36303057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 48729347 - 48729397
Alignment:
Q  296 cacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||| ||||||    
T  48729347 cacatcattttctctttcttattcaacacacattcaacttttaccctctcc 48729397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 346
Target Start/End: Original strand, 51520221 - 51520293
Alignment:
Q  275 ctttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttactctctcc 346  Q
    |||||||||||  ||||| ||||||||||||| |||||||| ||| |||||| ||||||| ||||| ||||||    
T  51520221 ctttttcaattttcaacactccacatcattttttctctcttaattaaacacttattcaacttttaccctctcc 51520293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 643924 - 643891
Alignment:
Q  228 taagaccatccctaatggtttttaccattcaaca 261  Q
    |||||||||||| |||||||||||||||||||||    
T  643924 taagaccatccccaatggtttttaccattcaaca 643891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 47300561 - 47300504
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| || || ||||||||||||||||||| || ||||||||| |||||||    
T  47300561 tttttcaattctcagcactccacatcattttctctcttttaattcaacacacattcaa 47300504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 8176391 - 8176297
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  8176391 cattcaacatcattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 8176297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 4577002 - 4577082
Alignment:
Q  266 tcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  4577002 tcaacaccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 4577082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 10569885 - 10569804
Alignment:
Q  265 ttcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||| ||||||||||||    
T  10569885 ttcaacaccactttttcaattcccaacactccacatcattttttgtctcttattcaacactcattcaacttttactctctcc 10569804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 226 - 346
Target Start/End: Original strand, 41263318 - 41263439
Alignment:
Q  226 cttaagaccatccctaatggtttttaccattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacac 324  Q
    |||||||||||||| |||||||     ||||||||| ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||     
T  41263318 cttaagaccatccccaatggttcaacacattcaacaccattcaacatccactttttcaattcccaacgctccacatcattttctctctcttattcaacat 41263417  T
Q  325 tcattcaacatttactctctcc 346  Q
    ||||||||| ||||| ||||||    
T  41263418 tcattcaacttttaccctctcc 41263439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 14278812 - 14278906
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||| || |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  14278812 cattcaacaacactcaacacccattttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaacttttaccctctcc 14278906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 25032311 - 25032428
Alignment:
Q  228 taagaccatccctaatggtttttaccattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactc 326  Q
    |||||||| ||| ||| |||  |||||||||| | | ||||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  25032311 taagaccacccccaatagttcataccattcaataccgttcaacacccaccttttcaatttccaacactccacatcattttctctctcttattcaacactc 25032410  T
Q  327 attcaacatttactctct 344  Q
    ||||||| ||||| ||||    
T  25032411 attcaacttttaccctct 25032428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 41153094 - 41153007
Alignment:
Q  253 cattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    |||||||||  |||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  41153094 cattcaacaatattcaacatccattttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttac 41153007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 31013924 - 31013851
Alignment:
Q  261 atcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  31013924 atcattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaa 31013851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 25652816 - 25652890
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||  ||||| ||||||    
T  25652816 ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattgaatttttaccctctcc 25652890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 9274517 - 9274456
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaaca 334  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  9274517 ccactttttcaattcccaacactccacatcatttt-tctctcttatttaacactcattcaaca 9274456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 344
Target Start/End: Original strand, 15972556 - 15972642
Alignment:
Q  259 acatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctct 344  Q
    |||||||| |||| |||||||||||||| |||||| || |||| |||||||||||||||||||||| ||||||||| ||||| ||||    
T  15972556 acatcatttaacatccactttttcaatttccaacaatcgacattattttctctctcttattcaacattcattcaacttttaccctct 15972642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 19241299 - 19241380
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| | ||||||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||||||| |||||||    
T  19241299 cattcaacaaccttcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaa 19241380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 25670974 - 25670913
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  25670974 ccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaa 25670913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 27407814 - 27407738
Alignment:
Q  272 ccactttttcaattcccaacattccacatcatttt--ctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||| |||| | |||||||||||||  ||||||||||||||||||||||||||| ||||| ||||||    
T  27407814 ccactttttcaatttccaatactccacatcattttatctctctcttattcaacactcattcaacttttaccctctcc 27407738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 27942474 - 27942555
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| | ||||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  27942474 cattcaacaaccttcaacacccactttttcaatccccaacactccacatcattttctctctcttaattcaacacccattcaa 27942555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 32976644 - 32976583
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  32976644 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 32976583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 40888897 - 40888958
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  40888897 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 40888958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 3454739 - 3454811
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaacatttactctc 343  Q
    ||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||  |||||||||    
T  3454739 ccactttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaatttttactctc 3454811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 8681354 - 8681282
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||| |||||| |||| |||||||||||| |||||||||||| ||||||||| ||||| ||||||    
T  8681354 actttttcaatttccaacactccatatcattttctctttcttattcaacattcattcaacttttaccctctcc 8681282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 12912875 - 12912946
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctc 345  Q
    ||||||| |||||| |||| ||||||||||||| ||||||||||| |||||||||||||| ||||| |||||    
T  12912875 acttttttaattcctaacactccacatcattttatctctcttatttaacactcattcaacttttaccctctc 12912946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 34918543 - 34918472
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||||| |||||| ||||||||||||  ||| |||||||||||||||||||||| ||||| ||||||    
T  34918543 cactttttcaatttccaacactccacatcattt--tctttcttattcaacactcattcaacttttaccctctcc 34918472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 11954769 - 11954846
Alignment:
Q  262 tcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacattta 338  Q
    |||||||||||| ||||||  ||||  ||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  11954769 tcattcaacacctacttttctaattatcaacactccacatcattttctctctcttattcaacattcattcaactttta 11954846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 13479892 - 13479831
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||| ||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  13479892 ccacttttttaattcccaacactccacatcattttctctctcataattcaacactcattcaa 13479831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 27407131 - 27407042
Alignment:
Q  253 cattcaacatcattcaacac-cactttttcaattcccaacattccacatcattttctctctctt-attc-aacactcattcaacatttac 339  Q
    ||||||||| | || ||||| |||||||||||||||||||| ||||||| |||||||||||||| |||| |||||||||||||| |||||    
T  27407131 cattcaacaacctttaacactcactttttcaattcccaacactccacattattttctctctcttaattctaacactcattcaacttttac 27407042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 42807068 - 42807007
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| |||||||    
T  42807068 ccactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaa 42807007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 37882517 - 37882432
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||||| | ||||||||| | ||||||||||||||||| ||||||||||||  | ||||||||||||| |||||||||| |||||    
T  37882517 cattcaacaacgttcaacacccattttttcaattcccaacactccacatcattt--tttctcttattcaacgctcattcaacttttac 37882432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 4938168 - 4938263
Alignment:
Q  253 cattcaacatcattcaacac-cactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttactctctcc 346  Q
    |||||||||  ||||||||| || ||||||||||| ||| | || ||||||||||||||||||| |||||||||| ||||||| ||||| ||||||    
T  4938168 cattcaacaatattcaacactcattttttcaattctcaatactcaacatcattttctctctcttaattcaacactaattcaacttttaccctctcc 4938263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 7651010 - 7651064
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctctt-attcaacactcatt 329  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||    
T  7651010 tttttcaattcccaacactccacatcattttctctctcttaattcaacacccatt 7651064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 29619082 - 29619021
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||||||| ||||||||||||||| |||| | ||||||||| |||||||    
T  29619082 ccactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaa 29619021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 30648181 - 30648120
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||| ||| |||||| |||||| |||||||| |||||||||||||||||    
T  30648181 ccactttttcaattccctacactccacaccattttatctctcttaattcaacactcattcaa 30648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 36572487 - 36572427
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||| |||| | |||||||||||||||||||||| ||||||||| |||||||    
T  36572487 cactttttcaatttccaatactccacatcattttctctctcttaattcaacacccattcaa 36572427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 39238419 - 39238458
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctc 313  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  39238419 actttttcaattcccaacactccacatcattttctctctc 39238458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 42608132 - 42608045
Alignment:
Q  253 cattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||||| ||||||||| ||  ||||||||||   |||| ||||| ||||||||||||| |||||||||||| ||||||| |||||    
T  42608132 cattcaacaacattcaacatccgttttttcaattattaacactccacgtcattttctctcttttattcaacacttattcaacttttac 42608045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 23089521 - 23089582
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||| ||||||||||| | |||||||||||||||||| | ||||||||| |||||||    
T  23089521 ccacttttttaattcccaacacttcacatcattttctctctcataattcaacacccattcaa 23089582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 31008453 - 31008392
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||| ||||| | |||||||||||||||||||| ||| ||||| |||||||    
T  31008453 ccactttttcaattctcaacacttcacatcattttctctctcttaatttaacacccattcaa 31008392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 34529469 - 34529384
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacattta 338  Q
    |||||||| ||||||||||| ||||||| ||||| |||||   ||||||||||||||||| ||||| |||| ||||| ||| ||||    
T  34529469 attcaacaacattcaacacctacttttttaattctcaacacatcacatcattttctctcttttatttaacattcatttaactttta 34529384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 42317892 - 42317944
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    ||||||||||||| |||||| |||| ||||||||||||||||| |||||||||    
T  42317892 cactttttcaatttccaacactccatatcattttctctctcttaattcaacac 42317944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 316
Target Start/End: Complemental strand, 23649235 - 23649192
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctctta 316  Q
    |||||||||||||||||||| |||| |||||||||||| |||||    
T  23649235 cactttttcaattcccaacactccatatcattttctctttctta 23649192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 23809336 - 23809379
Alignment:
Q  273 cactttttcaattcccaacattccacatcattttctctctctta 316  Q
    |||||||||||||||||||| |||| |||||||||||| |||||    
T  23809336 cactttttcaattcccaacactccatatcattttctctttctta 23809379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 34709880 - 34709938
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcatt 329  Q
    ||||||||||||||  ||||||||||| ||||||| |||||||| ||||||||| ||||    
T  34709880 ccactttttcaattttcaacattccacgtcattttttctctcttaattcaacacccatt 34709938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 4219509 - 4219472
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctc 309  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  4219509 ccactttttcaattcccaacacttcacatcattttctc 4219472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 39008483 - 39008524
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc 313  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  39008483 ccactttttcaattcccaacactccaaatcgttttctctctc 39008524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 6380566 - 6380483
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  6380566 cattcaacaccactttttcaattcccaacactccacatcattttctctctcttattcaacacacattcaacttttaccctctcc 6380483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 29428596 - 29428513
Alignment:
Q  263 cattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctc 345  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  29428596 cattcaacatccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactctc 29428513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 32359753 - 32359807
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctcttattcaacactcattc 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32359753 tttttcaattcccaacattccacatcattttctctctcttattcaacactcattc 32359807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 6725693 - 6725625
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttact 340  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  6725693 ccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttact 6725625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 631511 - 631582
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  631511 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaa 631582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 332
Target Start/End: Original strand, 8660541 - 8660623
Alignment:
Q  252 ccattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  8660541 ccattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacattcaa 8660623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 34328274 - 34328345
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  34328274 cattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaa 34328345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 34838576 - 34838645
Alignment:
Q  265 ttcaacac-cactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  34838576 ttcaacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 34838645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 332
Target Start/End: Original strand, 22627807 - 22627899
Alignment:
Q  241 aatggtttttaccattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaa 332  Q
    ||||||||||  ||||||||| || |||||||| || ||||||||| |||||| ||||||||||||||||||| ||||||||||  |||||||    
T  22627807 aatggtttttttcattcaacaacactcaacacccacgttttcaatttccaacactccacatcattttctctcttttattcaacatccattcaa 22627899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 197797 - 197868
Alignment:
Q  263 cattcaaca-ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||    
T  197797 cattcaacatccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcaa 197868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 10883875 - 10883936
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||    
T  10883875 ccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaa 10883936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 12501835 - 12501896
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| |||||||    
T  12501835 ccactttttcaattctcaacaatccacatcattttctctctcttaattcaacacccattcaa 12501896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 17961342 - 17961288
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctta 316  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  17961342 cattcaacacccactttttcaattcccaacactccacataattttctctctctta 17961288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 8669873 - 8669954
Alignment:
Q  253 cattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||| | ||||||| |||||||||||||| |||||| | ||||| |||||||||||||| ||||||||| |||||||    
T  8669873 cattcaacaaccttcaacatccactttttcaatttccaacacttcacattattttctctctcttaattcaacacccattcaa 8669954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 12512916 - 12512977
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||  ||||||||||||||||||| |||||||| ||||||||| |||||||    
T  12512916 ccactttttcaattttcaacattccacatcattttttctctcttaattcaacacccattcaa 12512977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 24348436 - 24348497
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| ||||||||||||||||||| || ||||||||  |||||||    
T  24348436 ccactttttcaattcccaacactccacatcattttctctcttttaattcaacatccattcaa 24348497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 30446251 - 30446308
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||||||| |||||||    
T  30446251 tttttcaattcctaacactccacatcattttctctctcttaattcaacacccattcaa 30446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 12480320 - 12480381
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||||||| | |||| || ||||||||||||| ||||| ||||||||| |||||||    
T  12480320 ccactttttcaatttcaaacactctacatcattttctcactcttaattcaacacccattcaa 12480381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 8218964 - 8219016
Alignment:
Q  288 caacattccacatcattttctctctctt-attcaacactcattcaacatttac 339  Q
    ||||| ||||||| |||||||||||||| ||||||||| |||||||| |||||    
T  8218964 caacactccacattattttctctctcttaattcaacacccattcaacttttac 8219016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 24933369 - 24933286
Alignment:
Q  255 ttcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctctta-ttcaacactcattcaacattt 337  Q
    ||||| ||| ||||||| ||| |||||||||| | |||| ||||||| |||||||||||| || |||||||||||||||| ||||    
T  24933369 ttcaatatccttcaacatccattttttcaatttc-aacactccacattattttctctctcataattcaacactcattcaatattt 24933286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 9074302 - 9074219
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  9074302 cattcaacaccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 9074219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 928000 - 927887
Alignment:
Q  232 accatccctaatggtttttaccattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattc 330  Q
    |||||||| |||||||||| || |||||||  |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  928000 accatccccaatggttttt-cctttcaacactattcaacacccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattc 927902  T
Q  331 aacatttactctctc 345  Q
    ||| ||||| |||||    
T  927901 aacttttacactctc 927887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 37245491 - 37245580
Alignment:
Q  258 aacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  37245491 aacaccattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 37245580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 228 - 346
Target Start/End: Original strand, 1987076 - 1987198
Alignment:
Q  228 taagaccatccctaatggttt---ttaccattcaacatcattcaacac-cactttttcaattcccaacattccacatcattttctctctcttattcaaca 323  Q
    |||||||||| | ||||||||   |||||||||||||  ||||||||  |||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  1987076 taagaccatctccaatggtttatattaccattcaacactattcaacattcactttttcaattctcaacactccacatcattttctatctcttattcaaca 1987175  T
Q  324 ctcattcaacatttactctctcc 346  Q
    |||||||||| ||||| ||||||    
T  1987176 ctcattcaacttttaccctctcc 1987198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 38901714 - 38901799
Alignment:
Q  262 tcattcaacac-cactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||    
T  38901714 tcattcaacacacactttttcaattccaaacactccacatcattttctctctcttattcaacactcgttcaacttttaccctctcc 38901799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 14152158 - 14152068
Alignment:
Q  251 accattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttac 339  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||| |||||||| |||||    
T  14152158 accattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacacccattcaacttttac 14152068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 12855014 - 12855085
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  12855014 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaa 12855085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 24997075 - 24997146
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  24997075 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaa 24997146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 30822662 - 30822591
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  30822662 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaa 30822591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 346
Target Start/End: Complemental strand, 31193048 - 31192978
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  31193048 tttttcaatttccaacactccacatcattttctctctcttattcaatactcattcaacttttaccctctcc 31192978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 2780805 - 2780732
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctc 345  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||| ||| |||||||||||    
T  2780805 ccactttttcaattcctaacattctacatcattttctctctcttattcaacacctatttaacttttactctctc 2780732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 13151575 - 13151478
Alignment:
Q  251 accattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttactctctcc 346  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| | ||||| ||||| | |||||| |||||||||||||||||| ||||| ||||||    
T  13151575 accattcaacaacattcaacacccactttttcaattcccaacactgcacataattttttttctcttaattcaacactcattcaacttttaccctctcc 13151478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 8852052 - 8852120
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcatt 329  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  8852052 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatt 8852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 22351702 - 22351622
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  22351702 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 22351622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 39434090 - 39434014
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacattta 338  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||| ||||    
T  39434090 cattcaacacccactttttcaatttccaacattccacatcattttttctcttttattaaacactcattcaactttta 39434014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 43021727 - 43021807
Alignment:
Q  254 attcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  43021727 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 43021807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 4296850 - 4296779
Alignment:
Q  263 cattcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  4296850 cattcaacacccactttttcaattcccaacactccacattattttctctctcttaattcaacactcattcaa 4296779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 36855851 - 36855768
Alignment:
Q  263 cattcaacaccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttactctctcc 346  Q
    |||| ||||||  ||||||||||||||||| ||| ||| ||||| |||||||||||||||||||||||||| ||||| ||||||    
T  36855851 catttaacacccatttttcaattcccaacactccccattattttttctctcttattcaacactcattcaacttttaccctctcc 36855768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 6333465 - 6333396
Alignment:
Q  254 attcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaac 322  Q
    |||||||| ||||||||| |||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  6333465 attcaacaacattcaacatccactttttcaattcctaatattccatatcattttctctctcttattcaac 6333396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 17485822 - 17485883
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  17485822 ccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaa 17485883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 31174253 - 31174187
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcattcaacatttac 339  Q
    ||||||||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||| |||||    
T  31174253 ccactttttcaattcccaacactccacattattta-tctctcttattcaacactcattcaacttttac 31174187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 36209551 - 36209465
Alignment:
Q  265 ttcaacacc-actttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttactctctcctatg 350  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||  |||| |||||||||||    
T  36209551 ttcaacacctactttttcaattctcaacactccacatcattttctctttcttaattcaacactcattcaattttta-tctctcctatg 36209465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 344
Target Start/End: Complemental strand, 5146824 - 5146707
Alignment:
Q  228 taagaccatccctaatggtttttaccattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctc-ttattcaacact 325  Q
    |||||||||||| |||||||||| |  ||||| | | ||||||||| | ||||| |||| |||||| |||||||||||||||||||| ||||||||||||    
T  5146824 taagaccatccccaatggttttttct-ttcaatacccttcaacacccatttttttaatttccaacactccacatcattttctctctctttattcaacact 5146726  T
Q  326 cattcaacatttactctct 344  Q
    |||| ||| ||||| ||||    
T  5146725 catttaacttttaccctct 5146707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 344
Target Start/End: Original strand, 6362938 - 6363031
Alignment:
Q  252 ccattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaacatttactctct 344  Q
    |||||||||| |  |||||| |||||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  6362938 ccattcaacaacggtcaacatccactttttcaattcc-aacactctacatcattttctctctcttaattcaacactcattcaacttttaccctct 6363031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 7588593 - 7588531
Alignment:
Q  253 cattcaacatcattcaacacc-actttttcaattcccaacattccacatcattttctctctct 314  Q
    ||||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  7588593 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 7588531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 7763564 - 7763495
Alignment:
Q  265 ttcaacacca-ctttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||| ||||||||| |||||||    
T  7763564 ttcaacaccaactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaa 7763495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 39490148 - 39490209
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||| |||||| |||||||||| |||||||||||||||||    
T  39490148 ccactttttcaattcccaacactccaaatcattctctctctcttaattcaacactcattcaa 39490209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 1073152 - 1073091
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||| |||||||||||||||||    
T  1073152 ccactttttcaattttcaacactccacttcattttctctctcttaattcaacactcattcaa 1073091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 14382972 - 14383025
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    |||||||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  14382972 ccactttttcaattcctaacactccacatcattttctctctcttaattcaacac 14383025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 36526826 - 36526870
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctta 316  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||    
T  36526826 ccactttttcaattcccaacactccacattattttctctctctta 36526870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 1308784 - 1308725
Alignment:
Q  255 ttcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctc 313  Q
    ||||| ||| ||||||| |||||||||||||| |||||| ||||||||||||||||||||    
T  1308784 ttcaatatctttcaacatccactttttcaatttccaacactccacatcattttctctctc 1308725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 9117817 - 9117878
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||  ||||| ||||  |||||||||||||||| |||||||||||||||||    
T  9117817 ccactttttcaattttcaacactccatttcattttctctctcttaattcaacactcattcaa 9117878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 17929320 - 17929283
Alignment:
Q  276 tttttcaattcccaacattccacatcattttctctctc 313  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17929320 tttttcaattcccaacactccacatcattttctctctc 17929283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 44279997 - 44280050
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacac 324  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| |||||||||    
T  44279997 ccactttttcaattttcaacactccacatcattttctctctcttaattcaacac 44280050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 231 - 346
Target Start/End: Complemental strand, 30648 - 30532
Alignment:
Q  231 gaccatccctaatggtttttaccattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcatt 329  Q
    ||||||||| |||||||    |||||||||| ||||||||| ||||||||||||||| ||||| |||| || |||||||||||||||||||||||| |||    
T  30648 gaccatccccaatggttaaacccattcaacaccattcaacatccactttttcaattctcaacactccatataattttctctctcttattcaacacttatt 30549  T
Q  330 caacatttactctctcc 346  Q
    |||| ||||||||||||    
T  30548 caacttttactctctcc 30532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 339
Target Start/End: Original strand, 123977 - 124084
Alignment:
Q  230 agaccatccctaatggtttttaccattcaacatcattcaaca-ccactttttcaattcccaacattccacatcattttctctctcttattcaacactcat 328  Q
    ||||||||  ||||||||||| |  ||||||| ||||||||| |||||||||||||| |||||| ||||||||||||  | |||||||||||||||||||    
T  123977 agaccatctataatggttttttct-ttcaacaccattcaacatccactttttcaatttccaacactccacatcattt--tttctcttattcaacactcat 124073  T
Q  329 tcaacatttac 339  Q
    ||||| |||||    
T  124074 tcaacttttac 124084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 57811 - 57750
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  57811 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 57750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 332
Target Start/End: Complemental strand, 66138 - 66079
Alignment:
Q  274 actttttcaattcccaacattccacatcattttctctctc-ttattcaacactcattcaa 332  Q
    ||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||    
T  66138 actttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaa 66079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 5391 - 5330
Alignment:
Q  272 ccactttttcaattcccaacattccacatcattttctctctctt-attcaacactcattcaa 332  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||  |||||||    
T  5391 ccactttttcaattcccaacactccacatcattttctctttcttaattcaacatccattcaa 5330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 170701 - 170661
Alignment:
Q  275 ctttttcaattcccaacattccacatcattttctctctctt 315  Q
    |||||||  ||||||||| ||||||||||||||||||||||    
T  170701 ctttttcttttcccaacactccacatcattttctctctctt 170661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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