View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4892_high_5 (Length: 380)

Name: NF4892_high_5
Description: NF4892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4892_high_5
NF4892_high_5
[»] chr5 (38 HSPs)
chr5 (20-369)||(35445552-35445902)
chr5 (28-160)||(10639972-10640105)
chr5 (24-147)||(7674663-7674786)
chr5 (24-147)||(39105479-39105604)
chr5 (24-144)||(7984984-7985105)
chr5 (74-146)||(11064732-11064804)
chr5 (80-147)||(9107162-9107229)
chr5 (21-147)||(43300890-43301017)
chr5 (27-147)||(11700181-11700301)
chr5 (25-147)||(12425587-12425712)
chr5 (27-160)||(16937801-16937935)
chr5 (23-160)||(42100325-42100463)
chr5 (24-132)||(42500189-42500296)
chr5 (87-147)||(15015922-15015982)
chr5 (24-122)||(29925856-29925955)
chr5 (85-160)||(32010022-32010097)
chr5 (23-138)||(36882055-36882170)
chr5 (79-160)||(7705916-7705997)
chr5 (97-161)||(42569530-42569593)
chr5 (74-133)||(32942660-32942719)
chr5 (97-160)||(42568948-42569011)
chr5 (84-161)||(32941545-32941623)
chr5 (26-147)||(34736458-34736580)
chr5 (23-61)||(36326025-36326063)
chr5 (34-95)||(3977333-3977394)
chr5 (24-61)||(4014442-4014479)
chr5 (24-100)||(17368691-17368767)
chr5 (24-61)||(36318789-36318826)
chr5 (24-96)||(37954701-37954774)
chr5 (68-125)||(39248158-39248215)
chr5 (82-147)||(39594881-39594946)
chr5 (23-147)||(40426779-40426904)
chr5 (74-147)||(41419385-41419458)
chr5 (24-100)||(2568673-2568749)
chr5 (24-147)||(9202679-9202803)
chr5 (74-146)||(15246899-15246971)
chr5 (81-145)||(32009766-32009830)
chr5 (79-147)||(41534509-41534577)
[»] chr4 (47 HSPs)
chr4 (24-160)||(17822783-17822920)
chr4 (28-143)||(1706641-1706757)
chr4 (24-146)||(21731588-21731711)
chr4 (25-147)||(24169279-24169402)
chr4 (24-140)||(2244066-2244183)
chr4 (25-161)||(13126493-13126630)
chr4 (28-160)||(54426062-54426195)
chr4 (79-160)||(55437147-55437228)
chr4 (79-147)||(15173234-15173302)
chr4 (79-147)||(39691080-39691148)
chr4 (80-160)||(49940085-49940165)
chr4 (24-147)||(52315128-52315252)
chr4 (79-161)||(27043747-27043829)
chr4 (84-146)||(40174633-40174695)
chr4 (37-147)||(41336788-41336899)
chr4 (79-160)||(42403941-42404021)
chr4 (24-160)||(26783-26919)
chr4 (79-147)||(25904154-25904222)
chr4 (79-147)||(29657455-29657523)
chr4 (87-147)||(49003973-49004033)
chr4 (24-95)||(18011886-18011957)
chr4 (35-126)||(21523584-21523675)
chr4 (27-118)||(28300260-28300351)
chr4 (23-125)||(49202659-49202762)
chr4 (72-114)||(1408285-1408327)
chr4 (24-114)||(2996588-2996678)
chr4 (118-160)||(25571369-25571411)
chr4 (24-161)||(35571548-35571686)
chr4 (34-147)||(49939882-49939996)
chr4 (102-159)||(55870261-55870319)
chr4 (75-128)||(4304100-4304153)
chr4 (79-160)||(18815094-18815175)
chr4 (74-139)||(20719769-20719834)
chr4 (103-136)||(44797975-44798008)
chr4 (24-61)||(51630126-51630163)
chr4 (24-147)||(1374507-1374631)
chr4 (68-112)||(1554975-1555019)
chr4 (74-146)||(2236914-2236985)
chr4 (108-144)||(8705041-8705077)
chr4 (24-147)||(19304941-19305065)
chr4 (79-147)||(22030274-22030342)
chr4 (79-146)||(22523750-22523818)
chr4 (79-147)||(27330007-27330075)
chr4 (27-83)||(28615541-28615597)
chr4 (79-147)||(29774311-29774379)
chr4 (28-92)||(44249304-44249368)
chr4 (68-147)||(52172784-52172864)
[»] chr1 (50 HSPs)
chr1 (24-125)||(14443464-14443565)
chr1 (68-156)||(38001655-38001743)
chr1 (24-146)||(7941621-7941744)
chr1 (79-147)||(2295167-2295235)
chr1 (83-147)||(24334270-24334334)
chr1 (29-136)||(38018306-38018414)
chr1 (24-161)||(3233932-3234070)
chr1 (81-147)||(37617396-37617462)
chr1 (79-147)||(6557043-6557111)
chr1 (79-147)||(29904822-29904890)
chr1 (87-147)||(39976141-39976201)
chr1 (24-123)||(51695450-51695550)
chr1 (90-161)||(33204311-33204382)
chr1 (24-147)||(37842287-37842410)
chr1 (24-106)||(7136971-7137053)
chr1 (28-147)||(1432534-1432654)
chr1 (24-147)||(6102169-6102292)
chr1 (79-147)||(13810069-13810137)
chr1 (24-119)||(27820156-27820251)
chr1 (24-147)||(49938762-49938886)
chr1 (32-147)||(2777915-2778030)
chr1 (24-95)||(35925705-35925776)
chr1 (80-147)||(50644186-50644253)
chr1 (33-147)||(473188-473302)
chr1 (24-62)||(27820354-27820392)
chr1 (74-160)||(36514594-36514680)
chr1 (32-117)||(4445731-4445816)
chr1 (74-147)||(10233579-10233652)
chr1 (24-117)||(34290251-34290344)
chr1 (24-61)||(45975705-45975742)
chr1 (25-61)||(1232923-1232959)
chr1 (24-147)||(10199339-10199463)
chr1 (24-100)||(17778972-17779048)
chr1 (79-130)||(9572049-9572100)
chr1 (79-146)||(38247398-38247465)
chr1 (79-125)||(7119891-7119937)
chr1 (79-145)||(7244587-7244652)
chr1 (24-54)||(17778721-17778751)
chr1 (103-141)||(30192038-30192076)
chr1 (109-147)||(38116008-38116046)
chr1 (108-141)||(1684036-1684069)
chr1 (103-160)||(2295286-2295343)
chr1 (103-156)||(15784412-15784465)
chr1 (31-147)||(31517671-31517788)
chr1 (79-148)||(37517096-37517165)
chr1 (79-147)||(5720996-5721064)
chr1 (21-144)||(27146189-27146313)
chr1 (21-61)||(37631577-37631617)
chr1 (21-61)||(38503483-38503523)
chr1 (74-146)||(43990323-43990395)
[»] chr6 (26 HSPs)
chr6 (24-132)||(20368127-20368235)
chr6 (37-160)||(34404644-34404767)
chr6 (24-147)||(13907600-13907722)
chr6 (24-161)||(31624273-31624413)
chr6 (27-100)||(31624108-31624181)
chr6 (24-136)||(31813176-31813289)
chr6 (25-159)||(6536631-6536763)
chr6 (30-146)||(2455280-2455397)
chr6 (79-160)||(6538585-6538666)
chr6 (71-147)||(33089568-33089645)
chr6 (33-147)||(34910340-34910455)
chr6 (69-157)||(26559160-26559249)
chr6 (108-144)||(658463-658499)
chr6 (74-142)||(9559358-9559426)
chr6 (85-144)||(10645319-10645378)
chr6 (110-161)||(21405071-21405122)
chr6 (108-147)||(35069543-35069582)
chr6 (69-146)||(33887890-33887968)
chr6 (24-97)||(34430442-34430516)
chr6 (24-61)||(835267-835304)
chr6 (28-136)||(9912133-9912242)
chr6 (42-95)||(28641733-28641786)
chr6 (26-62)||(837233-837269)
chr6 (41-160)||(848021-848140)
chr6 (86-146)||(2455066-2455126)
chr6 (120-160)||(7785662-7785702)
[»] chr2 (51 HSPs)
chr2 (24-136)||(18066143-18066256)
chr2 (24-160)||(26202043-26202180)
chr2 (27-160)||(7928216-7928351)
chr2 (24-146)||(1625915-1626038)
chr2 (81-147)||(44590097-44590163)
chr2 (24-160)||(4606940-4607077)
chr2 (24-117)||(12313135-12313228)
chr2 (79-160)||(27317450-27317531)
chr2 (74-147)||(42419859-42419932)
chr2 (24-147)||(750685-750809)
chr2 (24-147)||(36534783-36534907)
chr2 (24-136)||(43279469-43279584)
chr2 (25-143)||(41851551-41851670)
chr2 (35-147)||(2142680-2142793)
chr2 (79-144)||(10619154-10619219)
chr2 (74-147)||(42659142-42659215)
chr2 (87-147)||(30331830-30331890)
chr2 (80-160)||(31744370-31744450)
chr2 (79-146)||(15757590-15757657)
chr2 (81-147)||(2416386-2416452)
chr2 (74-144)||(19608567-19608637)
chr2 (26-147)||(20952372-20952494)
chr2 (24-106)||(43984976-43985058)
chr2 (33-160)||(15305698-15305826)
chr2 (109-161)||(18179050-18179102)
chr2 (24-96)||(18179223-18179295)
chr2 (26-90)||(29316764-29316828)
chr2 (65-117)||(32837379-32837431)
chr2 (79-146)||(36125432-36125497)
chr2 (24-95)||(3067363-3067434)
chr2 (108-147)||(3312177-3312216)
chr2 (28-126)||(7035519-7035618)
chr2 (24-95)||(35379000-35379071)
chr2 (79-142)||(39659445-39659508)
chr2 (23-124)||(16451132-16451234)
chr2 (109-147)||(29628673-29628711)
chr2 (42-100)||(43529837-43529895)
chr2 (68-117)||(5902511-5902560)
chr2 (110-147)||(12464404-12464441)
chr2 (74-159)||(13325636-13325721)
chr2 (24-117)||(24347737-24347830)
chr2 (23-100)||(35378511-35378588)
chr2 (36-132)||(40682341-40682438)
chr2 (24-136)||(42457963-42458076)
chr2 (24-144)||(45229526-45229647)
chr2 (84-160)||(3978667-3978743)
chr2 (119-159)||(9886416-9886456)
chr2 (79-147)||(23974424-23974492)
chr2 (71-146)||(38787833-38787909)
chr2 (90-146)||(39073634-39073690)
chr2 (29-117)||(41041984-41042072)
[»] chr7 (33 HSPs)
chr7 (79-147)||(19302494-19302562)
chr7 (24-146)||(33601342-33601465)
chr7 (81-147)||(27863656-27863722)
chr7 (24-136)||(19022527-19022640)
chr7 (24-136)||(33678795-33678908)
chr7 (24-142)||(33601963-33602082)
chr7 (24-147)||(34035932-34036056)
chr7 (24-146)||(36517594-36517715)
chr7 (24-160)||(44821974-44822110)
chr7 (87-162)||(31744881-31744956)
chr7 (85-147)||(33266417-33266479)
chr7 (37-157)||(3927931-3928052)
chr7 (79-160)||(4970710-4970791)
chr7 (71-147)||(8094368-8094445)
chr7 (74-147)||(20526512-20526585)
chr7 (79-147)||(46280211-46280282)
chr7 (75-140)||(48140270-48140335)
chr7 (24-147)||(17944274-17944398)
chr7 (90-146)||(18765366-18765422)
chr7 (24-119)||(21568454-21568550)
chr7 (79-147)||(48470115-48470183)
chr7 (29-147)||(25670517-25670636)
chr7 (93-147)||(9210906-9210960)
chr7 (75-121)||(27288014-27288060)
chr7 (42-115)||(31338541-31338614)
chr7 (74-146)||(41040230-41040303)
chr7 (25-54)||(47177652-47177681)
chr7 (82-146)||(21196342-21196406)
chr7 (119-147)||(24048651-24048679)
chr7 (87-147)||(33287919-33287979)
chr7 (24-159)||(33894642-33894778)
chr7 (28-124)||(39907822-39907917)
chr7 (85-160)||(45593605-45593681)
[»] chr3 (48 HSPs)
chr3 (24-147)||(21367682-21367806)
chr3 (24-161)||(39980744-39980882)
chr3 (24-147)||(34610737-34610861)
chr3 (24-147)||(39602142-39602265)
chr3 (84-146)||(18405763-18405825)
chr3 (103-161)||(25447162-25447220)
chr3 (24-143)||(3845498-3845617)
chr3 (21-147)||(24085269-24085396)
chr3 (33-147)||(31365240-31365355)
chr3 (24-135)||(53789406-53789516)
chr3 (24-147)||(22667419-22667542)
chr3 (24-147)||(22724058-22724181)
chr3 (79-147)||(31365119-31365187)
chr3 (85-160)||(42799884-42799960)
chr3 (28-147)||(46031009-46031129)
chr3 (24-100)||(49465644-49465720)
chr3 (80-147)||(584118-584185)
chr3 (28-145)||(402475-402593)
chr3 (74-136)||(37389249-37389311)
chr3 (79-143)||(3776325-3776390)
chr3 (24-160)||(22203445-22203581)
chr3 (28-144)||(30443912-30444029)
chr3 (110-147)||(33405123-33405160)
chr3 (28-161)||(36507009-36507142)
chr3 (79-159)||(24684741-24684821)
chr3 (24-100)||(45541586-45541662)
chr3 (79-147)||(51929288-51929356)
chr3 (36-100)||(53952075-53952139)
chr3 (57-147)||(5436120-5436211)
chr3 (108-147)||(5448544-5448583)
chr3 (25-147)||(20880492-20880615)
chr3 (24-95)||(23808048-23808119)
chr3 (116-147)||(26911699-26911730)
chr3 (26-144)||(38902083-38902201)
chr3 (87-160)||(20170632-20170706)
chr3 (85-147)||(42747713-42747775)
chr3 (42-95)||(5391912-5391965)
chr3 (74-147)||(26878266-26878339)
chr3 (74-147)||(34235024-34235097)
chr3 (24-61)||(35394516-35394553)
chr3 (75-159)||(50211801-50211886)
chr3 (68-113)||(54837000-54837045)
chr3 (24-95)||(901939-902011)
chr3 (79-147)||(9832686-9832754)
chr3 (112-160)||(16072959-16073007)
chr3 (103-147)||(36783283-36783327)
chr3 (41-93)||(38318992-38319044)
chr3 (24-60)||(38665308-38665344)
[»] chr8 (43 HSPs)
chr8 (79-147)||(10758188-10758256)
chr8 (24-147)||(27028846-27028970)
chr8 (79-147)||(35534544-35534612)
chr8 (29-147)||(1058008-1058126)
chr8 (79-160)||(30251372-30251453)
chr8 (69-147)||(2487939-2488018)
chr8 (36-146)||(26771292-26771403)
chr8 (84-147)||(43717865-43717928)
chr8 (24-148)||(3536875-3537000)
chr8 (75-136)||(28763435-28763496)
chr8 (82-147)||(38648425-38648490)
chr8 (24-160)||(44236741-44236878)
chr8 (103-159)||(9130238-9130294)
chr8 (24-147)||(11376718-11376842)
chr8 (84-160)||(15180616-15180691)
chr8 (45-147)||(15247708-15247811)
chr8 (108-159)||(30657696-30657747)
chr8 (79-146)||(38750428-38750495)
chr8 (42-112)||(5069730-5069800)
chr8 (81-147)||(35749501-35749567)
chr8 (79-160)||(38602400-38602479)
chr8 (24-136)||(1930050-1930163)
chr8 (103-148)||(6525912-6525957)
chr8 (24-148)||(11415169-11415294)
chr8 (43-147)||(32840917-32841022)
chr8 (44-160)||(43368618-43368735)
chr8 (81-161)||(36963271-36963351)
chr8 (75-146)||(41589653-41589724)
chr8 (84-146)||(12497004-12497066)
chr8 (110-160)||(32213221-32213271)
chr8 (85-146)||(37822591-37822653)
chr8 (79-161)||(42893407-42893489)
chr8 (82-147)||(922338-922403)
chr8 (110-147)||(1096592-1096629)
chr8 (42-95)||(12851209-12851262)
chr8 (87-136)||(13821986-13822035)
chr8 (24-125)||(27754419-27754520)
chr8 (28-160)||(43045643-43045776)
chr8 (75-147)||(12976279-12976351)
chr8 (110-146)||(16915839-16915875)
chr8 (24-147)||(31716158-31716282)
chr8 (28-147)||(35643919-35644039)
chr8 (68-116)||(41442416-41442464)
[»] scaffold0057 (1 HSPs)
scaffold0057 (74-146)||(24687-24759)


Alignment Details
Target: chr5 (Bit Score: 315; Significance: 1e-177; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 20 - 369
Target Start/End: Complemental strand, 35445902 - 35445552
Alignment:
Q  20 cttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaa 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35445902 cttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaa 35445803  T
Q  120 cttatgtcagtagataaactcaaataagatgatccaaacagatggtattagttttaattagtgatgtatttataaaattataataaatgtatcgagtaat 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35445802 cttatgtcagtagataaactcaaataagatgatccaaacagatggtattagttttaattagtgatgtatttataaaattataataaatgtatcgagtaat 35445703  T
Q  220 tttggaatgaagtttatatttaaggttaa-nnnnnnnnctacaaacttatgtttagggatataggtagtatatatataacacattttgaagtgaagagca 318  Q
    |||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35445702 tttggaatgaagtttatatttaaggttaatttttttttctacaaacttatgtttagggatataggtagtatatatataacacattttgaagtgaagagca 35445603  T
Q  319 cttgtttggtgttaaggttttggtttttgttgatctgcctgcatgatgatg 369  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35445602 cttgtttggtgttaaggttttggtttttgttgatttgcctgcatgatgatg 35445552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 10639972 - 10640105
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggt-gaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    |||| |||||||| ||||||||||||| | ||||| || ||   || |||| ||||||||||||||||| ||||  |||| | | |||||||||||||||    
T  10639972 ctattttggagaacttatgaaaataagctagaaaaagcttatgaaaaatgtcataagctgttttcataagttctcccaaacaatatcacaaaacttatgt 10640071  T
Q  127 cagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||||||||||||||| | ||||||||||    
T  10640072 cagtagataaactcaaataagctaatccaaacag 10640105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 7674663 - 7674786
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    |||||||||||||||||||| |||||||||| ||||||  ||| || ||||||| ||||| ||||| ||||| ||||  |||  ||||||||||||||||    
T  7674663 taagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccataagttcttccaagcagtctcacaaaactta 7674762  T
Q  124 tgtcagtagataaactcaaataag 147  Q
     ||  |||||||| ||||||||||    
T  7674763 agtaggtagataagctcaaataag 7674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 39105479 - 39105604
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtc-aaagagtctcacaaaact 121  Q
    ||||||||||||||||| ||||||||||||| | |||||  || |||||| |||| ||||||||||||||||||||||  | ||| ||||||| ||||||    
T  39105479 taagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctcccaaaaaagtctcataaaact 39105578  T
Q  122 tatgtcagtagataaactcaaataag 147  Q
    |||  |  ||||||||||||||||||    
T  39105579 tatacccctagataaactcaaataag 39105604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 7984984 - 7985105
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||||||||||||||||| ||||||   || |||||| | || | ||||||||||| |||  |||  |||| ||||||||||| |||    
T  7984984 taagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctcccaaatagtctcacaaagctt 7985083  T
Q  123 atgtcagtagataaactcaaat 144  Q
    ||| |||||||||| |||||||    
T  7985084 atgccagtagataatctcaaat 7985105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 11064732 - 11064804
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||| ||||||| ||||||||| |||| ||||| | |||||||||||||||||  ||||||||||||||||||    
T  11064732 atgtcataagctattttcataagttctctcaaacaatctcacaaaacttatgttggtagataaactcaaataa 11064804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 9107162 - 9107229
Alignment:
Q  80 taagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||| | ||||  |||| | ||||||||||||||||||| ||||||||||||||||||    
T  9107162 taagctgttttcatgagttctcccaaacattctcacaaaacttatgtcactagataaactcaaataag 9107229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 43300890 - 43301017
Alignment:
Q  21 ttgtaagctatcttggagaatttatgaaaataaggtgaaa-atgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaa 119  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||| ||   || |||| ||| |||||||| |||| ||||  | || ||||||| ||||    
T  43300890 ttgtaagctatcttggagaacttatgaaaataagctgaaacatgcttatataaaatgtcataggctgtttttataacttctccccaacagtctcataaaa 43300989  T
Q  120 cttatgtcagtagataaactcaaataag 147  Q
    |||||| || || |||| ||||||||||    
T  43300990 cttatgccattatataagctcaaataag 43301017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 11700181 - 11700301
Alignment:
Q  27 gctatcttggagaatttatgaaaataaggtgaaa--atgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    |||||| ||||||| ||||||||||||| |||||  ||   | ||||||| ||| ||||| ||||| ||||| |||||| ||| ||||||||||||||||    
T  11700181 gctatcgtggagaacttatgaaaataagatgaaacaat---ttatgaacaatgtcataagttgtttccataagttctgtgaaacagtctcacaaaactta 11700277  T
Q  124 tgtcagtagataaactcaaataag 147  Q
    || |||| ||||| ||||||||||    
T  11700278 tgccagtggataagctcaaataag 11700301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 12425587 - 12425712
Alignment:
Q  25 aagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaa--ttctgtcaaagagtctcacaaaact 121  Q
    |||||||||||||||| ||||||||||||| ||||||   || ||  ||| |||| || | |||||||||| |  ||||  |||| ||||||||||||||    
T  12425587 aagctatcttggagaacttatgaaaataagttgaaaacaacttattgacaatgttttaggttgttttcatataagttctcccaaacagtctcacaaaact 12425686  T
Q  122 tatgtcagtagataaactcaaataag 147  Q
    |||| |||||||||| ||||||||||    
T  12425687 tatgacagtagataagctcaaataag 12425712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 16937935 - 16937801
Alignment:
Q  27 gctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttatg 125  Q
    ||||| |||||||| ||| ||||||||| ||||||   || |||||  | || ||||||||||||||||| ||||  |||| | ||||||||||||||||    
T  16937935 gctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctgttttcataagttcttccaaacactctcacaaaacttatg 16937836  T
Q  126 tcagtagataaactcaaataagatgatccaaacag 160  Q
      ||||||||| ||||||||||   ||||||||||    
T  16937835 ctagtagataagctcaaataagccaatccaaacag 16937801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 160
Target Start/End: Original strand, 42100325 - 42100463
Alignment:
Q  23 gtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaact 121  Q
    ||||||||| || ||||| ||||||||||||| ||||||  |||  ||||| |||| ||||||| |||||| || |||| ||| | |||| ||||||| |    
T  42100325 gtaagctatttttgagaacttatgaaaataagatgaaaacaccttttgaactatgtcataagctattttcacaagttctctcacacagtcacacaaaatt 42100424  T
Q  122 tatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||| || ||||||| ||||||||||   ||||||||||    
T  42100425 tatgccaatagataagctcaaataagcccatccaaacag 42100463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 42500296 - 42500189
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| |||||||| ||||||||||||| |||||| || || |||| || ||  |||| ||||| ||||| ||||  ||||||||||||||||||||    
T  42500296 taagctatattggagaacttatgaaaataagttgaaaaagctta-tgaaaattgtcgtaagttgtttccataagttctc-caaagagtctcacaaaactt 42500199  T
Q  123 atgtcagtag 132  Q
    ||||||||||    
T  42500198 atgtcagtag 42500189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 15015922 - 15015982
Alignment:
Q  87 ttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||| ||||  |||| ||||||||||| ||||||||||||||||| ||||||||||    
T  15015922 ttttcataagttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaataag 15015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 29925856 - 29925955
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| |||||||| ||||||||||||| ||||||   |  ||||||| ||| ||||||||||||||||| ||||  ||||  ||||||||||||||    
T  29925856 taagctatattggagaacttatgaaaataagttgaaaaaaacacatgaacattgtcataagctgttttcataagttctcccaaacggtctcacaaaactt 29925955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 32010022 - 32010097
Alignment:
Q  85 tgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||||| |||| ||||| ||||| |  |||||||||| ||||||||||||||||||||   ||||||||||    
T  32010022 tgttttcataagttctctcaaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacag 32010097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 36882170 - 36882055
Alignment:
Q  23 gtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||||  || ||| |||||| ||||||| |||||||   | |||||||||||||| | ||||||||||  ||||   |||||||||||||||  ||    
T  36882170 gtaagctattatgaagattttatggaaataagatgaaaataggttatgaacatgttatatgttgttttcataggttcttgtaaagagtctcacaaatgtt 36882071  T
Q  123 atgtcagtagataaac 138  Q
    |||||| |||||||||    
T  36882070 atgtcaatagataaac 36882055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 7705997 - 7705916
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||||||||||| ||||  |||||||  ||||||||||||||  ||||||||  ||||||||||   ||||||||||    
T  7705997 ataagctgttttcataagttctcccaaagagcgtcacaaaacttatgctagtagatatgctcaaataagtcaatccaaacag 7705916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 42569593 - 42569530
Alignment:
Q  97 ttctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    |||| ||||| ||||||||||||||||||  |||||||| |||||||||| || |||||||||||    
T  42569593 ttctctcaaatagtctcacaaaacttatgctagtagatacactcaaataa-atcatccaaacaga 42569530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 32942660 - 32942719
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtaga 133  Q
    |||| ||||||||| ||||||||||||  |||| ||||  ||||||||||||||||||||    
T  32942660 atgtcataagctgtattcataaattctcccaaacagtcaaacaaaacttatgtcagtaga 32942719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 42569011 - 42568948
Alignment:
Q  97 ttctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||||||||| |||||||| |||||||||| |||  |||||||||||||||   ||||||||||    
T  42569011 ttctgtcaaacagtctcacgaaacttatgttagtgcataaactcaaataagtcaatccaaacag 42568948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 32941545 - 32941623
Alignment:
Q  84 ctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaa-ctcaaataagatgatccaaacaga 161  Q
    |||||||||||| ||||  ||||  |||||||| |||||||||||||||||||| ||| ||||||   |||||||||||    
T  32941545 ctgttttcataagttctcccaaacggtctcacagaacttatgtcagtagataaagctctaataagtcaatccaaacaga 32941623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 34736580 - 34736458
Alignment:
Q  26 agctatcttggagaatttatgaaaataagg-tgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttat 124  Q
    |||||||||||||||||||| |||| || | || |||   || || ||||||| || |||||| |||| || ||||  ||||  ||||||||||||||||    
T  34736580 agctatcttggagaatttataaaaacaaagctgtaaacagcttataaacatgtcattagctgtgttcaaaagttctcccaaactgtctcacaaaacttat 34736481  T
Q  125 gtcagtagataaactcaaataag 147  Q
    ||||  |||||| ||||||||||    
T  34736480 gtcaccagataagctcaaataag 34736458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 36326025 - 36326063
Alignment:
Q  23 gtaagctatcttggagaatttatgaaaataaggtgaaaa 61  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  36326025 gtaagctatcttggagaatttatgtaaataagctgaaaa 36326063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 3977333 - 3977394
Alignment:
Q  34 tggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 95  Q
    ||||||| ||||||||||||| |||| |   |||| |||||||| |||||||||||||||||    
T  3977333 tggagaaattatgaaaataagctgaagacagctaaggaacatgtcataagctgttttcataa 3977394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 4014479 - 4014442
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaa 61  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  4014479 taagctatcttggagaacttatgaaaataagctgaaaa 4014442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 17368691 - 17368767
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaa-tgcctaatgaacatgttataagctgttttcataaattct 100  Q
    ||||||||||||||||  ||||| ||||||| |||||| ||| | |||||||||| ||||| ||||||||||| ||||    
T  17368691 taagctatcttggagaggttatggaaataagctgaaaactgcat-atgaacatgtcataagttgttttcataagttct 17368767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 36318789 - 36318826
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaa 61  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  36318789 taagctatcttggagaatttatgtaaataagctgaaaa 36318826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 37954701 - 37954774
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgtt-ataagctgttttcataaa 96  Q
    |||||||| ||||||||  |||||||||||| ||||||   |||||||| || || ||||||||||||||||||    
T  37954701 taagctatattggagaacatatgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcataaa 37954774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 39248158 - 39248215
Alignment:
Q  68 atgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatg 125  Q
    ||||||| || |||||||||||| |||| ||||  |||| ||||||||||||||||||    
T  39248158 atgaacaagtcataagctgtttttataagttctcccaaacagtctcacaaaacttatg 39248215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 39594881 - 39594946
Alignment:
Q  82 agctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||| || |  |||| | ||| |||||||||||||| |||||||| ||||||||||    
T  39594881 agctgttttcataagttgtcccaaacaatctaacaaaacttatgtcggtagataagctcaaataag 39594946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 40426779 - 40426904
Alignment:
Q  23 gtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaact 121  Q
    ||||||| |||||||||| ||| ||||||||| | ||||   || ||||| | ||  |||||||||||||||||   |   |||| |||||||||||| |    
T  40426779 gtaagctgtcttggagaacttacgaaaataagcttaaaaaagcttatgaaaaatggcataagctgttttcataagcacccccaaacagtctcacaaaatt 40426878  T
Q  122 tatgtcagtagataaactcaaataag 147  Q
    ||||||| ||||||| ||||||||||    
T  40426879 tatgtcattagataagctcaaataag 40426904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 41419385 - 41419458
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| |||||||||||||| || || |  |||| | |||||||||| |||||||||||||| | ||||||||||    
T  41419385 atgtcataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataag 41419458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 2568673 - 2568749
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 100  Q
    ||||||||| ||||||  | ||||||||||| | |||||  || ||||| |||| ||||||||||||||||| ||||    
T  2568673 taagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttct 2568749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 9202803 - 9202679
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||| ||||||| |||| ||||||||||||| || |||   || ||||||| ||| ||||||||||| ||| | || |   ||| ||||| |||||||||    
T  9202803 taagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttccattagttttccgaaatagtcttacaaaactt 9202704  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    ||| ||| |||||| ||||||||||    
T  9202703 atgccaggagataagctcaaataag 9202679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 15246899 - 15246971
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||| ||||| || |||||||| ||||  |||| | ||| | ||||||||||||||||||||| |||||||||    
T  15246899 atgtcataagttgctttcataagttctcccaaacattctaataaaacttatgtcagtagataagctcaaataa 15246971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 32009766 - 32009830
Alignment:
Q  81 aagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaata 145  Q
    ||||||||||||||| || |  |||| |||||||||||||||| ||||  ||||| |||||||||    
T  32009766 aagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaacagatagactcaaata 32009830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 41534509 - 41534577
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||| || || |  |||| | |||||||||| |||||||||||||| | ||||||||||    
T  41534509 ataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataag 41534577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 17822920 - 17822783
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatg-aacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||| ||||||||||||| | ||||   || ||| || |||| ||||||||||||||||  ||||   ||| ||||||||| |||||    
T  17822920 taagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttctcctaaatagtctcacagaactt 17822821  T
Q  123 atgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||||||||||||| |||||||||| | ||||||||||    
T  17822820 atgtcagtagataagctcaaataagttaatccaaacag 17822783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 1706641 - 1706757
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    |||||||||| |  ||||||||||||| || ||||  || ||||||| ||  ||||||||||||||||| |||| |||||  ||||||||||||||||||    
T  1706641 ctatcttggacagcttatgaaaataagttggaaatagcttatgaacaatgccataagctgttttcataatttctctcaaaccgtctcacaaaacttatgt 1706740  T
Q  127 cagtagataaactcaaa 143  Q
    |||||||||||||||||    
T  1706741 cagtagataaactcaaa 1706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 21731711 - 21731588
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| ||||||||||||||||| |||| ||||||    | ||||| || || ||||||||||||||||| ||||  |||| | |||||||||||||    
T  21731711 taagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttcataagttctcccaaacaatctcacaaaactt 21731612  T
Q  123 atgtcagtagataaactcaaataa 146  Q
    |||||||||||||  |||||||||    
T  21731611 atgtcagtagatatgctcaaataa 21731588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 24169279 - 24169402
Alignment:
Q  25 aagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    |||||||||||||||  ||||||||||||| ||||||   || ||||| | ||| ||||||| |||| | || |||| ||||| ||||||||||||||||    
T  24169279 aagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctctcaaatagtctcacaaaactta 24169378  T
Q  124 tgtcagtagataaactcaaataag 147  Q
    || |||||||||||||| ||||||    
T  24169379 tgccagtagataaactctaataag 24169402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 2244066 - 2244183
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| |||||||| ||||||||||||||||||||    | ||||| || || |||||||||||| | |||||||  |||| ||| ||| |||||||    
T  2244066 taagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaatattgtcataagctgtttttaaaaattctcccaaacagtttcaaaaaactt 2244165  T
Q  123 atgtcagtagataaactc 140  Q
    ||||||||||||||||||    
T  2244166 atgtcagtagataaactc 2244183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 13126630 - 13126493
Alignment:
Q  25 aagctatcttggagaatttatgaaaataaggtgaaaatgcctaatga-acatgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    |||||||||| ||||| ||||||||||||| ||||||   || |||| | |||| |||||||||||| |||| ||||  |||| ||||||||||||||||    
T  13126630 aagctatcttcgagaacttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacagtctcacaaaactta 13126531  T
Q  124 tgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    ||| ||||| ||| || |||||||   |||||||||||    
T  13126530 tgttagtaggtaagctaaaataagccaatccaaacaga 13126493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 54426062 - 54426195
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    |||| |||||||| ||||||||||||  ||||||   || ||||| || || ||||||||||||| ||| ||||  |||  ||||||||||||||||||     
T  54426062 ctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcccaagcagtctcacaaaacttatgc 54426161  T
Q  127 cagtagataaactcaaataagatgatccaaacag 160  Q
    |||||||||| ||||||||||   ||||||||||    
T  54426162 cagtagataagctcaaataagccaatccaaacag 54426195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 55437147 - 55437228
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||| ||||||||||| |||| ||||| | | |||||||||||||| |||||||||||||||||||||   ||||||||||    
T  55437147 ataagttgttttcataagttctttcaaacaatttcacaaaacttatggcagtagataaactcaaataagccaatccaaacag 55437228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 15173302 - 15173234
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||| |||||||||| |||  |||| |||||||||||||||||||||||||||||  |||||||||    
T  15173302 ataagctattttcataaagtctcccaaacagtctcacaaaacttatgtcagtagataagttcaaataag 15173234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 39691148 - 39691080
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||  |||||||||| ||||| ||||||||||||||||||  ||||||||| ||||||||||    
T  39691148 ataagctgttcccataaattctctcaaacagtctcacaaaacttatgctagtagataagctcaaataag 39691080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 49940165 - 49940085
Alignment:
Q  80 taagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| || || ||| ||||||||||   ||||||||||    
T  49940165 taagctgttttcataagttctctcaaacagtctcacaaaacttatgttagcaggtaagctcaaataagtcaatccaaacag 49940085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 52315252 - 52315128
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| ||||| || ||||||||||||| |||||    || ||||| | ||| ||||| |||||| |||| ||||  |||| | |||||||||||||    
T  52315252 taagctattttggaaaacttatgaaaataagctgaaagcaacttatgaataatgtgataagttgttttgataagttcttccaaacaatctcacaaaactt 52315153  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    | |||||||||||||||||||||||    
T  52315152 acgtcagtagataaactcaaataag 52315128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 27043829 - 27043747
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    ||||||| ||| ||||| ||||  |||| ||| ||||||||||||||||||||||||| ||||||||||   |||||||||||    
T  27043829 ataagctatttgcataacttcttccaaacagtttcacaaaacttatgtcagtagataagctcaaataagtcaatccaaacaga 27043747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 40174633 - 40174695
Alignment:
Q  84 ctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||||||||||| || |  |||| ||||||||||||||||||| |||||||||||||||||||    
T  40174633 ctgttttcataagttatcccaaacagtctcacaaaacttatgttagtagataaactcaaataa 40174695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 147
Target Start/End: Original strand, 41336788 - 41336899
Alignment:
Q  37 agaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagata 135  Q
    |||||||| ||||||||| ||||||   || ||||| | ||| ||||||||||||| ||| ||||  | ||   ||||||||||||||||| ||||||||    
T  41336788 agaatttacgaaaataagttgaaaaaagcttatgaaaactgtcataagctgttttcttaagttcttcctaactatctcacaaaacttatgtgagtagata 41336887  T
Q  136 aactcaaataag 147  Q
    ||||||||||||    
T  41336888 aactcaaataag 41336899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 42404021 - 42403941
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||||||||||||| |||||||  |||| || | |||||||||||||||||| ||||| ||||||||||   ||||||||||    
T  42404021 ataagctgttttcagaaattctcccaaatag-cacacaaaacttatgtcagttgataagctcaaataagtcaatccaaacag 42403941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 26919 - 26783
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    |||||||| |||||||| ||||||||||||  |||||| || |    ||  ||| ||||||||||||||||| ||||   ||| ||||| ||||| ||||    
T  26919 taagctatattggagaacttatgaaaataatctgaaaaagcttgtgaaatttgtcataagctgttttcataatttctcggaaacagtctaacaaagctta 26820  T
Q  124 tgtcagtagataaactcaaataagatgatccaaacag 160  Q
    || |||| ||||| ||||||||||   ||||||||||    
T  26819 tgccagttgataagctcaaataagccaatccaaacag 26783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 25904222 - 25904154
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||||||  |||  |||| |||||||||||| |||||||| | ||||| ||||||||||    
T  25904222 ataagctgttttcataagctctcccaaacagtctcacaaaatttatgtcattggataagctcaaataag 25904154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 29657455 - 29657523
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||| |||| ||||  | ||||||||||||| |||  |||||||| ||||||||||    
T  29657455 ataagctgttttcataagttctctcaagcaatctcacaaaacttgtgttggtagataagctcaaataag 29657523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 49004033 - 49003973
Alignment:
Q  87 ttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||| |||| ||||| |||||||||||||||| |  ||||||||| ||||||||||    
T  49004033 ttttcataagttctctcaaatagtctcacaaaacttaagctagtagataagctcaaataag 49003973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 18011886 - 18011957
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 95  Q
    |||||||||||| ||| |||||||||||||| | |||| | || ||  |||| |||||||||||||||||||    
T  18011886 taagctatcttgaagagtttatgaaaataagctaaaaacggcttatatacatattataagctgttttcataa 18011957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 21523584 - 21523675
Alignment:
Q  35 ggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    |||||| ||||||||||||| |||||| || ||   || |||| ||||| ||||||||||||||||  |||| ||| |||||||| ||||||    
T  21523584 ggagaagttatgaaaataagctgaaaaagcttatgaaaaatgtcataagttgttttcataaattcttccaaacagtgtcacaaaatttatgt 21523675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 28300351 - 28300260
Alignment:
Q  27 gctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaa 118  Q
    ||||||||| |||  ||||||||||||| ||||||   || | |||||||| ||| |||||||||||||||||| ||||  |||| ||||||    
T  28300351 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttcataaattctctcaatcagtcacacaaa 28300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 49202659 - 49202762
Alignment:
Q  23 gtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaact 121  Q
    ||||||||||||||| || | ||||||||||| ||||||   || |||||| |||| |||| ||| ||| |||| ||||  |||| ||||||||||||||    
T  49202659 gtaagctatcttggataactaatgaaaataagttgaaaacaacttatgaacaatgtgataatctggttttataagttcttccaaacagtctcacaaaact 49202758  T
Q  122 tatg 125  Q
    ||||    
T  49202759 tatg 49202762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 1408327 - 1408285
Alignment:
Q  72 acatgttataagctgttttcataaattctgtcaaagagtctca 114  Q
    |||||| |||||||||||||||||||||| ||||| |||||||    
T  1408327 acatgtaataagctgttttcataaattctctcaaacagtctca 1408285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 2996588 - 2996678
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctca 114  Q
    ||||||||||||||||   |||||||||||| ||||||   || ||| |||||| ||||| |||||||||||  ||| ||||| |||||||    
T  2996588 taagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagtctca 2996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 25571369 - 25571411
Alignment:
Q  118 aacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||||||||||||||||||||||||   ||||||||||    
T  25571369 aacttatgtcagtagataaactcaaataagccaatccaaacag 25571411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 35571686 - 35571548
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||| ||||| || |||||||||| |||||    || ||||||| ||| |||||||||||| | || ||||  ||||   || ||||||||||    
T  35571686 taagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttttaaaagttctcccaaactatcccacaaaactt 35571587  T
Q  123 atgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    |||  ||||||||| ||||||||||   |||||||||||    
T  35571586 atgctagtagataagctcaaataagccaatccaaacaga 35571548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 49939996 - 49939882
Alignment:
Q  34 tggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtag 132  Q
    ||||| |||||| | |||||| ||||||   || ||||||| ||| ||||||| ||||||||| ||||  |||| ||||||||||| ||||||  |||||    
T  49939996 tggagcatttataataataagctgaaaacagcttatgaacaatgtcataagctcttttcataagttcttccaaatagtctcacaaagcttatgctagtag 49939897  T
Q  133 ataaactcaaataag 147  Q
    |||| || |||||||    
T  49939896 ataagcttaaataag 49939882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 55870319 - 55870261
Alignment:
Q  102 tcaaagagtctcacaaaactt-atgtcagtagataaactcaaataagatgatccaaaca 159  Q
    |||||||||||||||||  || |||||| |||||||||||||||||| | |||||||||    
T  55870319 tcaaagagtctcacaaatgtttatgtcattagataaactcaaataagttaatccaaaca 55870261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 4304153 - 4304100
Alignment:
Q  75 tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtca 128  Q
    ||||||||  ||||||||||| |||| ||||| ||| |||||||||||||||||    
T  4304153 tgttataaattgttttcataagttctctcaaacagtttcacaaaacttatgtca 4304100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 18815094 - 18815175
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||| || || | |||| ||||| ||||||||||||||||||  ||||| ||| ||||||||||   ||||||||||    
T  18815094 ataagctgtctttattagttctctcaaacagtctcacaaaacttatgctagtaggtaagctcaaataagccaatccaaacag 18815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 20719769 - 20719834
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaact 139  Q
    |||| ||||||||||||| ||| ||||  |||| |||| |||||||||||||  ||||||||||||    
T  20719769 atgtcataagctgttttcttaagttcttccaaatagtcgcacaaaacttatgctagtagataaact 20719834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 44797975 - 44798008
Alignment:
Q  103 caaagagtctcacaaaacttatgtcagtagataa 136  Q
    |||| |||||||||||||||||||||||||||||    
T  44797975 caaacagtctcacaaaacttatgtcagtagataa 44798008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 51630126 - 51630163
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaa 61  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  51630126 taagctatcttgaagaatttatgaaaataagctgaaaa 51630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 1374631 - 1374507
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||| ||| ||||||| |||||||||||||| |||||||   | ||||| | ||| ||||| |||||||||| |||||  |||| ||  |||||||| ||    
T  1374631 taagttatattggagattttatgaaaataagttgaaaataatttatgaatattgtcataagttgttttcatatattctcccaaacagaatcacaaaattt 1374532  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    |||  ||||||||| ||||| ||||    
T  1374531 atgctagtagataagctcaattaag 1374507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 1555019 - 1554975
Alignment:
Q  68 atgaacatgttataagctgttttcataaattctgtcaaagagtct 112  Q
    |||||||||| ||||||| |||||||||||||| ||||| |||||    
T  1555019 atgaacatgtcataagctattttcataaattctctcaaacagtct 1554975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 2236985 - 2236914
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||| ||||| ||||||||||| || | ||||| ||||||| ||| |||||||||||||||||  ||||||||    
T  2236985 atgtgataagttgttttcataagttatctcaaacagtctcataaa-cttatgtcagtagataagttcaaataa 2236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 8705041 - 8705077
Alignment:
Q  108 agtctcacaaaacttatgtcagtagataaactcaaat 144  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  8705041 agtctcacaaaacttatgtcaatagataagctcaaat 8705077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 19304941 - 19305065
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaa-actt 122  Q
    |||||||| ||||||| || ||| ||| ||| ||||||   || ||| |||||| ||||||||||| || |||||||  || | | |||||||||  |||    
T  19304941 taagctattttggagagttaatggaaacaagctgaaaacaacttatggacatgtcataagctgtttccacaaattctcccacacaatctcacaaatgctt 19305040  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    |||||| ||||||| ||||||||||    
T  19305041 atgtcaatagataatctcaaataag 19305065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 22030274 - 22030342
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||| ||||  |||| || |||||||||||||||  | |||| || ||||||||||    
T  22030274 ataagctgttttcataagttctcccaaataggctcacaaaacttatgctaatagacaagctcaaataag 22030342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 22523750 - 22523818
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaa-acttatgtcagtagataaactcaaataa 146  Q
    ||||||| ||||||||| ||   ||||| ||||||||||  |||||||||||||||||||||| |||||    
T  22523750 ataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtagataaactcgaataa 22523818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 27330075 - 27330007
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||| ||||||||||||| || ||||| | |||||  |||||||||| ||||||||| || |||||||    
T  27330075 ataagttgttttcataaatcctctcaaacaatctcattaaacttatgtaagtagataagcttaaataag 27330007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 28615541 - 28615597
Alignment:
Q  27 gctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataag 83  Q
    |||||||||||||  ||||| |||||||||||||||  |||||| |||||| |||||    
T  28615541 gctatcttggagagcttatggaaataaggtgaaaatatctaatggacatgtcataag 28615597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 29774311 - 29774379
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||| ||||||||| ||||   ||| ||||||||||||||   ||||||| |||||||||||||||    
T  29774311 ataagctattttcataagttctcctaaacagtctcacaaaactctagtcagtaaataaactcaaataag 29774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 44249304 - 44249368
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttca 92  Q
    |||||||||||| |||||||||||||| |||| |   || || ||||||| ||||||||||||||    
T  44249304 ctatcttggagagtttatgaaaataagctgaagaaaacttatcaacatgtcataagctgttttca 44249368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 52172784 - 52172864
Alignment:
Q  68 atgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaa-acttatgtcagtagataaactcaaataag 147  Q
    |||||||||| ||||||||||||||||| || |  | || ||||||||||| ||||||| |||||  ||| ||||||||||    
T  52172784 atgaacatgtcataagctgttttcataagttttccccaacagtctcacaaatacttatgccagtatgtaagctcaaataag 52172864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 14443464 - 14443565
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    |||||||  |||||||||||||||||||||||||||||   || | |||||||||| |||||||||||||||||||| ||| | |||||||||||| |||    
T  14443464 taagctacattggagaatttatgaaaataaggtgaaaacaacttacgaacatgttaaaagctgttttcataaattctttcatatagtctcacaaaattta 14443563  T
Q  124 tg 125  Q
    ||    
T  14443564 tg 14443565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 38001655 - 38001743
Alignment:
Q  68 atgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaa 156  Q
    ||||||| || ||||||||||||||||| ||||  |||| ||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  38001655 atgaacaggtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaaataagcttatccaa 38001743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 7941621 - 7941744
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| | |||||| ||||||||||||| |||||||  ||   |||| |||| ||||||||||||||||||||||  |||| ||||||||||||||     
T  7941621 taagctatttcggagaacttatgaaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactc 7941720  T
Q  123 atgtcagtagataaactcaaataa 146  Q
    | || || ||||||||||||||||    
T  7941721 acgttagcagataaactcaaataa 7941744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 2295167 - 2295235
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||| ||||  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  2295167 ataagctgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaataag 2295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 24334270 - 24334334
Alignment:
Q  83 gctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||    
T  24334270 gctgtttttataaattctctcaaatagtctcacaaaacttatgtccgttgataaactcaaataag 24334334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 38018414 - 38018306
Alignment:
Q  29 tatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtc 127  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||  ||| ||| |||||||| || |  |||  |||||||||||||||||| |    
T  38018414 tatcttggagaattcatgaaaataagctgaaaatacctaatgaacaatgtcctaatctgctttcataagttttcccaaccagtctcacaaaacttatgcc 38018315  T
Q  128 agtagataa 136  Q
    |||||||||    
T  38018314 agtagataa 38018306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 3234070 - 3233932
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| |||||||| |||||||||||||  |||||   || ||||| | ||||||||| ||||||||||| ||||  | || |||||||||||||||    
T  3234070 taagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttgttttcataagttctccctaacagtctcacaaaactt 3233971  T
Q  123 atgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    | | || ||||||| ||||||||||   |||||||||||    
T  3233970 acggcactagataagctcaaataagtcaatccaaacaga 3233932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 37617462 - 37617396
Alignment:
Q  81 aagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||||||  |||| |||||||||||||||| | || ||||||||||||||||||    
T  37617462 aagctgttttcataaattctcgcaaacagtctcacaaaacttacggcaatagataaactcaaataag 37617396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 6557043 - 6557111
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||| ||||||||| |||| ||||| ||||||||||||||||||| |||||||||  |||||||||    
T  6557043 ataagctattttcataagttctctcaaatagtctcacaaaacttatgttagtagataagttcaaataag 6557111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 29904822 - 29904890
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||| |||| |||| ||||| ||||||||||||||||||  ||||||||| ||||||||||    
T  29904822 ataagctgtttttataagttctctcaaacagtctcacaaaacttatgcaagtagataagctcaaataag 29904890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 39976201 - 39976141
Alignment:
Q  87 ttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||| |||| ||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  39976201 ttttcataagttctctcaaacagtttcacaaaacttatgtcagtagataatctcaaataag 39976141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 51695550 - 51695450
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||||||||||||||||| |||||||  || |||||| |||| ||||| |||||  |||| ||||  |||| |||||||||| ||||    
T  51695550 taagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagttcttccaaacagtctcacaagactt 51695451  T
Q  123 a 123  Q
    |    
T  51695450 a 51695450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 33204382 - 33204311
Alignment:
Q  90 tcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||||||||  |||| |||||||    
T  33204382 tcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctcaaataagtcgatctaaacaga 33204311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 37842410 - 37842287
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    |||||||||||| |||| |||| |||||||| ||||||   || |||||||||| || || ||||||||||| ||||    || ||| |||| |||||||    
T  37842410 taagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcattagatgttttcataagttctactgaacagtgtcaccaaactta 37842311  T
Q  124 tgtcagtagataaactcaaataag 147  Q
    | ||||||||||| ||||||||||    
T  37842310 tatcagtagataagctcaaataag 37842287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 7137053 - 7136971
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaa 106  Q
    ||||||||||||||||| ||||||||||||| |||||||  || ||||| |||| ||||||  ||||||||| |||| |||||    
T  7137053 taagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataagcgattttcataagttctttcaaa 7136971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 1432534 - 1432654
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    ||||||||||||| |||||||| |||| | |  ||| || ||||||| ||| ||| ||| ||||||||| ||||  |||| |||||||||||| ||||||    
T  1432534 ctatcttggagaacttatgaaagtaagctaagtatgtcttatgaacaatgtcatacgctattttcataagttcttccaaacagtctcacaaaatttatgt 1432633  T
Q  127 cagtagataaactcaaataag 147  Q
    | || ||||| ||||||||||    
T  1432634 cggtggataagctcaaataag 1432654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 6102169 - 6102292
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||||| |||||||||||| ||||||| ||||||    | ||||||| | | ||||||||||||||||  ||||  |||| | |||||||||| ||    
T  6102169 taagctatctgggagaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaaaattt 6102267  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    ||| | |||||||||||||||||||    
T  6102268 atgccggtagataaactcaaataag 6102292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 13810069 - 13810137
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| |||| ||||||| |||| | |||||||||||||||||||| |||||||||||| | ||||||||    
T  13810069 ataaactgtattcataagttctctaaaagagtctcacaaaacttacgtcagtagataagcacaaataag 13810137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 27820251 - 27820156
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaa 119  Q
    |||||||||||  |||||||||||||||||| |||||||  || |||||| |||| ||||||| ||||||||||||||   ||| ||||||||||||    
T  27820251 taagctatcttaaagaatttatgaaaataagctgaaaatagcttatgaacaatgtaataagct-ttttcataaattctccaaaacagtctcacaaaa 27820156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 49938762 - 49938886
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| || ||||| ||||||||||||| ||||||   ||  |||| || || ||||||||||||||||| ||||  |||| | |||||||||||||    
T  49938762 taagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcataagttctcccaaacaatctcacaaaactt 49938861  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    ||| ||  | |||||||||||||||    
T  49938862 atgccacgatataaactcaaataag 49938886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 2777915 - 2778030
Alignment:
Q  32 cttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagta 131  Q
    ||||||||| ||||||||||||| |||||| | || ||||| | || ||||| || |||||||| ||||   ||| ||||||||||||||||||  | ||    
T  2777915 cttggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggtttcataagttctcctaaacagtctcacaaaacttatgcaaata 2778014  T
Q  132 gataaactcaaataag 147  Q
    ||||| || |||||||    
T  2778015 gataagctaaaataag 2778030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 35925705 - 35925776
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 95  Q
    ||||||||| |||||| |||||| ||||||| ||||||   || |||||||||| |||||||||||||||||    
T  35925705 taagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataa 35925776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 50644253 - 50644186
Alignment:
Q  80 taagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| ||||||||||| ||||  |||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  50644253 taagttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataag 50644186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 473188 - 473302
Alignment:
Q  33 ttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtag 132  Q
    |||||||| ||||||||||||| ||||||   || ||||| ||  |||||||| ||||||||| ||||  ||||  || ||||| |||||||| ||||||    
T  473188 ttggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtataagcttttttcataagttctcccaaaatgtttcacagaacttatgccagtag 473287  T
Q  133 ataaactcaaataag 147  Q
    |||  ||||||||||    
T  473288 ataggctcaaataag 473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 27820392 - 27820354
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaat 62  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  27820392 taagctatcttggagaatttatgaaaataagctgaaaat 27820354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 36514680 - 36514594
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||| ||||| | ||||||||| ||||  | || ||||||| |||||||||| ||||||||||||||||||||| ||| | ||||||    
T  36514680 atgtcataagttattttcataagttctccctaacagtctcaaaaaacttatggcagtagataaactcaaataagttgaccgaaacag 36514594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 4445731 - 4445816
Alignment:
Q  32 cttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa 117  Q
    ||||||||  || |||||||||| ||||||   ||  |||||||||||||||||| |||||||||||||  |||| ||||||||||    
T  4445731 cttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 4445816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 10233652 - 10233579
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| ||||||||||||||||| ||||  |||| ||||| ||||||| ||||||||| ||||| ||| ||||||    
T  10233652 atgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 10233579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 34290251 - 34290344
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa 117  Q
    |||||||||||| |||| ||||||||||||| ||||||   || ||||| |||| ||||||| |||| |||||||||  |||| ||| ||||||    
T  34290251 taagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataagcttttttaataaattctcccaaatagtttcacaa 34290344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 45975705 - 45975742
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaa 61  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  45975705 taagctatcttggagaatttatgaaaataagctgaaaa 45975742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 1232959 - 1232923
Alignment:
Q  25 aagctatcttggagaatttatgaaaataaggtgaaaa 61  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1232959 aagctatcttggagaatttatgaaaataagctgaaaa 1232923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 10199463 - 10199339
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa-aactt 122  Q
    |||||||| || ||||  ||||||||||||| ||||||   || |||||||||| ||||||| ||||||| | ||||  |||| ||| ||||||   |||    
T  10199463 taagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaagtgctt 10199364  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    |||| ||||||||| ||||||||||    
T  10199363 atgttagtagataagctcaaataag 10199339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 17778972 - 17779048
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 100  Q
    |||||||||||||||||||| || ||||||||||||||    | ||||||| |||||||| |||||| |||| ||||    
T  17778972 taagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgttataagttgtttttataagttct 17779048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 9572100 - 9572049
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagt 130  Q
    ||||||||||||||||| ||||  |||| ||||||||||| |||||||||||    
T  9572100 ataagctgttttcataagttctcccaaacagtctcacaaatcttatgtcagt 9572049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 38247398 - 38247465
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    ||||||||||||||||| ||||  |||| |||  ||||||||||||| ||||||||||  ||||||||    
T  38247398 ataagctgttttcataagttctcccaaacagtgacacaaaacttatgccagtagataagttcaaataa 38247465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 7119937 - 7119891
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatg 125  Q
    ||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  7119937 ataagttgttttcataaattcttgcaaacagtctcacaaaacttatg 7119891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 7244652 - 7244587
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaata 145  Q
    ||||| ||||||||||| |||  | ||| ||||||||||||||||| ||| ||||||||||||||||    
T  7244652 ataagttgttttcataagttcc-taaaatagtctcacaaaacttatatcaatagataaactcaaata 7244587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 54
Target Start/End: Original strand, 17778721 - 17778751
Alignment:
Q  24 taagctatcttggagaatttatgaaaataag 54  Q
    |||||||||||||||||||||||||||||||    
T  17778721 taagctatcttggagaatttatgaaaataag 17778751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 30192038 - 30192076
Alignment:
Q  103 caaagagtctcacaaaacttatgtcagtagataaactca 141  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  30192038 caaagagtctcataaaacttatgtcaatagataaactca 30192076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 38116046 - 38116008
Alignment:
Q  109 gtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  38116046 gtctcacaaaacttacgtcagtagataagctcaaataag 38116008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 1684069 - 1684036
Alignment:
Q  108 agtctcacaaaacttatgtcagtagataaactca 141  Q
    ||||||||||||||||||||||||||||| ||||    
T  1684069 agtctcacaaaacttatgtcagtagataagctca 1684036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 2295286 - 2295343
Alignment:
Q  103 caaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||| ||||||| |||||||| |||||||||||| ||||||||||   ||||||||||    
T  2295286 caaatagtctcagaaaacttaagtcagtagataagctcaaataagccaatccaaacag 2295343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 15784412 - 15784465
Alignment:
Q  103 caaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaa 156  Q
    |||| ||||| ||||||||||||| ||||||||| ||||||||||  |||||||    
T  15784412 caaacagtcttacaaaacttatgttagtagataagctcaaataagtcgatccaa 15784465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 31517788 - 31517671
Alignment:
Q  31 tcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa-aacttatgtcag 129  Q
    |||||||||  ||||||||||||| ||||||   || |||||||||| || || |||||| |||| ||||  |||| ||||||||||   |||||| |||    
T  31517788 tcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctcacaagtgcttatgccag 31517689  T
Q  130 tagataaactcaaataag 147  Q
    || |||| ||||||||||    
T  31517688 taaataagctcaaataag 31517671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 37517165 - 37517096
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataaga 148  Q
    ||||||||||||| ||| |||| ||| | ||||||||||||||||||  |||| |||| |||||| ||||    
T  37517165 ataagctgttttcgtaagttctttcatacagtctcacaaaacttatgcaagtatataagctcaaacaaga 37517096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 5720996 - 5721064
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||| ||||  |||| ||||  ||||||||||||  ||||| ||| ||||||||||    
T  5720996 ataagctgttttcataagttctcccaaacagtccaacaaaacttatgcaagtagttaagctcaaataag 5721064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 27146313 - 27146189
Alignment:
Q  21 ttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaa 119  Q
    |||||| |||||||| |||| ||| |||| |||| ||||||   || ||||||| ||| ||||| ||||| | ||| ||||  |||  ||||||||||||    
T  27146313 ttgtaaactatcttgaagaacttacgaaagtaagttgaaaacagcttatgaacaatgtcataagttgtttccttaagttcttccaacaagtctcacaaaa 27146214  T
Q  120 cttatgtcagtagataaactcaaat 144  Q
    |||||| || ||||||| |||||||    
T  27146213 cttatgccaatagataagctcaaat 27146189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 37631617 - 37631577
Alignment:
Q  21 ttgtaagctatcttggagaatttatgaaaataaggtgaaaa 61  Q
    ||||||||||| |||||||| ||||||||||||| ||||||    
T  37631617 ttgtaagctatattggagaacttatgaaaataagctgaaaa 37631577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 38503523 - 38503483
Alignment:
Q  21 ttgtaagctatcttggagaatttatgaaaataaggtgaaaa 61  Q
    |||| ||||||||||||||| ||||||||||||| ||||||    
T  38503523 ttgttagctatcttggagaacttatgaaaataagctgaaaa 38503483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 43990323 - 43990395
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||| |||||||||||||| |  ||||  |||| || ||||||||| |||| ||||||||| |||||||||||    
T  43990323 atgtcataagctgttttcaaacgttctcccaaatagcctcacaaaatttatatcagtagatgaactcaaataa 43990395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 20368235 - 20368127
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    |||||| |||||||||| ||||||||||||| ||||| |  || |||||||||| ||||| ||||||||||| ||||  |||| ||||| ||||||||||    
T  20368235 taagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctcccaaatagtcttacaaaactta 20368136  T
Q  124 tgtcagtag 132  Q
    |||||||||    
T  20368135 tgtcagtag 20368127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 34404767 - 34404644
Alignment:
Q  37 agaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataa 136  Q
    |||||||||||||||| | ||||||   || ||| |||||| ||||| | ||||||||| ||||  |||||| || |||||||||||||||||| |||||    
T  34404767 agaatttatgaaaatatgctgaaaacagcttatgtacatgtcataagatattttcataagttctcccaaagactcacacaaaacttatgtcagttgataa 34404668  T
Q  137 actcaaataagatgatccaaacag 160  Q
    |||||||||||   ||||||||||    
T  34404667 actcaaataagtaaatccaaacag 34404644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 13907600 - 13907722
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||| ||||||||||| ||||||||||||  |||||||  ||  |||||| ||| | |||||||||||||||||||| |||||  ||||||  ||||||    
T  13907600 taagccatcttggagaaattatgaaaataaactgaaaataacttgtgaacaatgtcagaagctgttttcataaattctctcaaaccgtctca--aaactt 13907697  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    ||| || ||||||||||||||||||    
T  13907698 atgccactagataaactcaaataag 13907722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 31624273 - 31624413
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaa---c 120  Q
    |||||| |||||| ||| ||||||||||||  | |||||  || ||| |||||| || |||||||||||||||||||  |||| |||||| |||||   |    
T  31624273 taagctgtcttggtgaaattatgaaaataacattaaaataacttatggacatgtcatgagctgttttcataaattctaccaaacagtctctcaaaacagc 31624372  T
Q  121 ttatgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    ||||||||||| |||| ||||||||||   |||||||||||    
T  31624373 ttatgtcagtatataagctcaaataagccaatccaaacaga 31624413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 31624108 - 31624181
Alignment:
Q  27 gctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 100  Q
    |||||||||||||| ||||||||||||| ||||||   || |||||||||| ||||||||||||||||| ||||    
T  31624108 gctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttct 31624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 31813176 - 31813289
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||||||||||||  |||||||||||| |||||| | || |||||| || | ||||||  ||||||||| ||||  |||| |||||||||||||||    
T  31813176 taagctatcttggagaacatatgaaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctcccaaatagtctcacaaaactt 31813275  T
Q  123 atgtcagtagataa 136  Q
    ||| ||||| ||||    
T  31813276 atgccagtaaataa 31813289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 6536631 - 6536763
Alignment:
Q  25 aagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    ||||||| |||||||||||||||||||||| ||||||   || ||||| || | | ||||||||||  |||||||||  |||| ||||  ||||||||||    
T  6536631 aagctatattggagaatttatgaaaataagttgaaaaaagcttatgaaaattgctgtaagctgtttg-ataaattctcccaaacagtc--acaaaactta 6536727  T
Q  124 tgtcagtagataaactcaaataagatgatccaaaca 159  Q
    ||||||||| |||||||||||||  | |||||||||    
T  6536728 tgtcagtaggtaaactcaaataatttaatccaaaca 6536763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 2455280 - 2455397
Alignment:
Q  30 atcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtca 128  Q
    ||||||||||| || |||||||||| ||||||   || || |||| ||| ||||| ||||||||||| |||| ||||| ||| |||| ||||||||||      
T  2455280 atcttggagaagttgtgaaaataagctgaaaacaacttataaacaatgtaataagttgttttcataagttctctcaaatagtttcaccaaacttatgttt 2455379  T
Q  129 gtagataaactcaaataa 146  Q
    |||||||| |||||||||    
T  2455380 gtagataagctcaaataa 2455397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 6538585 - 6538666
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||||||||| ||||||  | || |||||||| ||||||||| || || ||||||||||||||||  ||||||||||    
T  6538585 ataagctgttttcatcaattctcccgaacagtctcaccaaacttatgccactacataaactcaaataagacaatccaaacag 6538666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 33089568 - 33089645
Alignment:
Q  71 aacatgttataagctgttttcataaattctgtcaaagagtctcacaaa-acttatgtcagtagataaactcaaataag 147  Q
    |||||||  |||||||||||||||| |||| | ||| ||||||||||| || ||||||||||||||| ||||||||||    
T  33089568 aacatgtcctaagctgttttcataagttctctgaaatagtctcacaaatacatatgtcagtagataagctcaaataag 33089645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 34910455 - 34910340
Alignment:
Q  33 ttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagta 131  Q
    |||||||| |||||||| ||||  |||||   || ||||||| ||| ||||||||||||||||  ||||  |||| | |||| ||||||| || ||||||    
T  34910455 ttggagaacttatgaaagtaagcggaaaacaactcatgaacaatgtcataagctgttttcatagtttcttccaaacaatctcccaaaactgatatcagta 34910356  T
Q  132 gataaactcaaataag 147  Q
    ||||||||||||||||    
T  34910355 gataaactcaaataag 34910340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 157
Target Start/End: Complemental strand, 26559249 - 26559160
Alignment:
Q  69 tgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaa-cttatgtcagtagataaactcaaataagatgatccaaa 157  Q
    ||||||| | ||||| ||||||||||| ||||  |||| |||||||||||  |||||| |||||| |||||||||||||| | |||||||    
T  26559249 tgaacatatcataagttgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaa 26559160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 658499 - 658463
Alignment:
Q  108 agtctcacaaaacttatgtcagtagataaactcaaat 144  Q
    ||||||||||||||||||||| |||||||||||||||    
T  658499 agtctcacaaaacttatgtcaatagataaactcaaat 658463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 9559426 - 9559358
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaa 142  Q
    ||||| |||||||||||||||| ||||   ||| |||||||||||||||||| || ||||||| |||||    
T  9559426 atgttgtaagctgttttcataacttctcctaaacagtctcacaaaacttatgccaatagataatctcaa 9559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 10645378 - 10645319
Alignment:
Q  85 tgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaat 144  Q
    ||||||||||| ||||  |||| ||||| ||||||||||||||| ||||||| |||||||    
T  10645378 tgttttcataagttctcccaaacagtcttacaaaacttatgtcattagataacctcaaat 10645319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 21405122 - 21405071
Alignment:
Q  110 tctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    |||||||||||||||||||||| |||| ||||||||||   |||||||||||    
T  21405122 tctcacaaaacttatgtcagtatataagctcaaataagtcaatccaaacaga 21405071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 147
Target Start/End: Complemental strand, 35069582 - 35069543
Alignment:
Q  108 agtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  35069582 agtcttacaaaacttatgtcagtagataagctcaaataag 35069543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 33887890 - 33887968
Alignment:
Q  69 tgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa-aacttatgtcagtagataaactcaaataa 146  Q
    ||||||||| ||||||| |||||||||||||| ||||| | | ||||||   || ||||||||| ||||||||||||||    
T  33887890 tgaacatgtcataagctattttcataaattctctcaaacaatgtcacaagtgctaatgtcagtaaataaactcaaataa 33887968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 34430516 - 34430442
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatga-acatgttataagctgttttcataaat 97  Q
    ||||||||||||||||| ||||||||||||| ||||||   || |||| | |||| |||||||||||||| ||||    
T  34430516 taagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgttttcacaaat 34430442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 835304 - 835267
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaa 61  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  835304 taagctatcttggagaacttatgaaaataagctgaaaa 835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 9912242 - 9912133
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    |||| |||||||| ||||||||||||| | ||||   || ||||||| ||| |||||||| |||||||| ||||   ||| |||| | |||||||||| |    
T  9912242 ctatattggagaacttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctccgaaacagtcgcccaaaacttatat 9912143  T
Q  127 cagtagataa 136  Q
    ||||||||||    
T  9912142 cagtagataa 9912133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 28641786 - 28641733
Alignment:
Q  42 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 95  Q
    ||||||||||||| | ||||   || ||||||||||||||||||||||||||||    
T  28641786 ttatgaaaataagctaaaaacagcttatgaacatgttataagctgttttcataa 28641733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 837269 - 837233
Alignment:
Q  26 agctatcttggagaatttatgaaaataaggtgaaaat 62  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  837269 agctatcttggagaacttatgaaaataagctgaaaat 837233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 848021 - 848140
Alignment:
Q  41 tttatgaaaataaggtgaaaat-gcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaact 139  Q
    |||||||||||||| ||||||  || |||  || |||| |||||| ||||| |||| ||||  |||| |||||||||||||||||| |  ||||||| ||    
T  848021 tttatgaaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttcttccaaacagtctcacaaaacttatg-ctatagataagct 848119  T
Q  140 caaataagatgatccaaacag 160  Q
    ||||||||   ||||||||||    
T  848120 caaataaggcaatccaaacag 848140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 2455066 - 2455126
Alignment:
Q  86 gttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    ||||||| || ||||  |||| ||||||||||||||||||| |||||||||  ||||||||    
T  2455066 gttttcagaagttctcccaaacagtctcacaaaacttatgttagtagataagttcaaataa 2455126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 7785702 - 7785662
Alignment:
Q  120 cttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||||||||||||||||| ||||||||||  ||||||||||    
T  7785702 cttatgtcagtagataaattcaaataagacaatccaaacag 7785662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 18066143 - 18066256
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||| ||| |||||||||||||||||  || |||| | |||| ||||||||||||||||| || |   ||| ||| |||||||||||    
T  18066143 taagctatcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctgttttcataagttgtacaaaacagtttcacaaaactt 18066242  T
Q  123 atgtcagtagataa 136  Q
    ||||||||||||||    
T  18066243 atgtcagtagataa 18066256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 26202043 - 26202180
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||| ||| |||||||| ||||||||||||| ||||||   || ||||| || || ||||| |||| |||||||||||  |||||| |||||||||||||    
T  26202043 taagatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttctcataaattctagcaaagaatctcacaaaactt 26202142  T
Q  123 atgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||| ||||||  ||||||||| | ||||||||||    
T  26202143 atgtcagcagataagttcaaataagttaatccaaacag 26202180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 7928351 - 7928216
Alignment:
Q  27 gctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgtt-ataagctgttttcataaattctgtcaaagagtctcacaaaacttat 124  Q
    |||||||||||||| ||||||||||||| ||||||   || ||||||| |||  |||||||||||||| || |||| || || ||||||||| |||||||    
T  7928351 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtccataagctgttttcaaaagttctttctaacagtctcacacaacttat 7928252  T
Q  125 gtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||| ||||||| ||||||||||   ||||||||||    
T  7928251 gtcaatagataagctcaaataagccaatccaaacag 7928216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 1625915 - 1626038
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||| ||| |||||| || ||||||   || |||||||| || |||||||  |||||||| |||| ||||| ||||| |||||||||    
T  1625915 taagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataagctactttcataagttctctcaaatagtcttacaaaactt 1626014  T
Q  123 atgtcagtagataaactcaaataa 146  Q
    |||||||  ||||| |||||||||    
T  1626015 atgtcaggggataagctcaaataa 1626038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 44590097 - 44590163
Alignment:
Q  81 aagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||| |||| |||||  |||||||||||||||||||  ||||||||||||||||||    
T  44590097 aagctgttttcataagttctttcaaacggtctcacaaaacttatgtctatagataaactcaaataag 44590163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 4606940 - 4607077
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||| ||||||||||||| | |||    || |||||| |||| ||||| |||||||| || ||||  |||| |||||||||||||||    
T  4606940 taagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcccaaatagtctcacaaaactt 4607039  T
Q  123 atgtcagtagataaactcaaataagatgatccaaacag 160  Q
    || |  |||||||| ||||||||||   ||||||||||    
T  4607040 atattggtagataagctcaaataagccaatccaaacag 4607077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 12313228 - 12313135
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa 117  Q
    ||||||||||||||||  |||||||||||||||||||    || |||||||||  ||||||||||||||||||||||  |||| | ||||||||    
T  12313228 taagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctcccaaacaatctcacaa 12313135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 27317450 - 27317531
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||| ||||||||||| |||| ||||| ||||||| |||||||||||| |||||||| ||||||||||   ||||||||||    
T  27317450 ataagttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatccaaacag 27317531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 42419859 - 42419932
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| ||||||||||||| ||| ||||  |||| ||||||| |||||||||||||| |||||||||||||||||    
T  42419859 atgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaaataag 42419932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 750685 - 750809
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||| ||||| ||||||| | ||||   || ||||||| ||| || |||| ||||||||| ||||  |||| | ||||||||||| |    
T  750685 taagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttcttgcaaacactctcacaaaacat 750784  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    ||| ||| |||||||||||||||||    
T  750785 atgccaggagataaactcaaataag 750809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 36534783 - 36534907
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| | |||||||| ||||||||||| |||||||   | ||||||| | ||||||||||||||||||| || |  |||| |||||||||||||||    
T  36534783 taagctatataggagaattaatgaaaataagctgaaaatagattatgaacaattttataagctgttttcataagttatcccaaacagtctcacaaaactt 36534882  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    |||  || | |||| ||||||||||    
T  36534883 atgaaagcatataagctcaaataag 36534907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 43279584 - 43279469
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtc--aaagagtctcacaaaac 120  Q
    |||||||| |||||||| || |||||||||| ||||||   || ||||| || || |||||||||||||||||||||| ||  ||| |||||||||||||    
T  43279584 taagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctctcccaaacagtctcacaaaac 43279485  T
Q  121 ttatgtcagtagataa 136  Q
    |||||  |||||||||    
T  43279484 ttatgctagtagataa 43279469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 41851551 - 41851670
Alignment:
Q  25 aagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    ||||||||||||||||||||||||| |||| ||| ||   || ||||| | ||| ||||| ||||| ||||||||||  |||  |||||||||||||||     
T  41851551 aagctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcataagttgtttccataaattctcccaatcagtctcacaaaacttt 41851650  T
Q  124 tgtcagtagataaactcaaa 143  Q
    ||||| ||||||| ||||||    
T  41851651 tgtcaatagataagctcaaa 41851670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 2142680 - 2142793
Alignment:
Q  35 ggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtaga 133  Q
    |||||||||||||||||||| | ||||   ||||||||||| || | ||  ||||||||||| ||||  |||| ||||||| ||||||||||   |||||    
T  2142680 ggagaatttatgaaaataagctaaaaacagctaatgaacattgtcacaacttgttttcataagttctcccaaacagtctcataaaacttatgcatgtaga 2142779  T
Q  134 taaactcaaataag 147  Q
    ||||||||||||||    
T  2142780 taaactcaaataag 2142793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 10619219 - 10619154
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaat 144  Q
    ||||||||||||||| | ||||  ||| | |||||||||||||| |||||||||||||||||||||    
T  10619219 ataagctgttttcatgagttctcccaaggggtctcacaaaacttgtgtcagtagataaactcaaat 10619154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 42659215 - 42659142
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| |||||||||||||| || ||||  |||| |||||||||||||||||| ||||| |||| ||||||||||    
T  42659215 atgtcataagctgttttcaaaacttctcccaaacagtctcacaaaacttatgccagtaaataagctcaaataag 42659142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 30331830 - 30331890
Alignment:
Q  87 ttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||| ||||  |||| ||||||||||||||||||||||||||||| || |||||||    
T  30331830 ttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataag 30331890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 31744370 - 31744450
Alignment:
Q  80 taagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||||||| || |||| ||||| ||||||| |||||||||||| |||||||| | ||||||||   ||||||||||    
T  31744370 taagctgttttcaaaagttctctcaaacagtctcagaaaacttatgtcggtagataagcccaaataagccaatccaaacag 31744450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 15757657 - 15757590
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||||| |||||||||||||||  |||  |||||||||||||||||| ||||| |||| |||||||||    
T  15757657 ataagcagttttcataaattctcccaagcagtctcacaaaacttatgccagtaaataagctcaaataa 15757590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 2416386 - 2416452
Alignment:
Q  81 aagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||| |||| ||||  |||  ||| ||||||||||||||| ||||||||||||||||||||    
T  2416386 aagctgttttaataagttcttccaagcagtttcacaaaacttatgttagtagataaactcaaataag 2416452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 19608637 - 19608567
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaat 144  Q
    |||| ||||||||| || |||| ||||  |||| ||||||| ||||| |||||||||||||||||||||||    
T  19608637 atgtcataagctgtgtttataagttctcgcaaacagtctcataaaacctatgtcagtagataaactcaaat 19608567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 20952372 - 20952494
Alignment:
Q  26 agctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttat 124  Q
    |||||| |||||||| ||||||||||||| ||||||    ||||||| || |  |||| |||||||||||| |||| | ||| ||||| ||||||||| |    
T  20952372 agctatattggagaacttatgaaaataagttgaaaaaagttaatgaaaattggcataaactgttttcataagttctcttaaatagtctaacaaaactttt 20952471  T
Q  125 gtcagtagataaactcaaataag 147  Q
    | ||||| |||| ||||||||||    
T  20952472 gccagtatataagctcaaataag 20952494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 43985058 - 43984976
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaa 106  Q
    |||||||||||| |||  ||||||||||||| |||||||   |||||||||| |||||||||| ||| | ||||||| |||||    
T  43985058 taagctatcttgaagagcttatgaaaataagctgaaaatagataatgaacatattataagctgatttaacaaattctctcaaa 43984976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 15305698 - 15305826
Alignment:
Q  33 ttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagta 131  Q
    |||||||| ||||||||||||| ||||||   || ||||| || |  ||||| |||| ||| || ||||  |||| ||| ||||||||||||||||| ||    
T  15305698 ttggagaacttatgaaaataagttgaaaaaaacttatgaaaattgccataagttgttgtcaaaagttctaccaaacagtttcacaaaacttatgtcaata 15305797  T
Q  132 gataaactcaaataagatgatccaaacag 160  Q
    ||||| ||||||||||   ||||||||||    
T  15305798 gataagctcaaataagccaatccaaacag 15305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 18179050 - 18179102
Alignment:
Q  109 gtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    |||||||||||||||||| ||||||||| ||||||||||   |||||||||||    
T  18179050 gtctcacaaaacttatgttagtagataagctcaaataagtcaatccaaacaga 18179102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 18179295 - 18179223
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaa 96  Q
    ||||||||| ||||||| ||| ||||||||| |||||||  |||||| ||||||  |||| ||||||||||||    
T  18179295 taagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttttcataaa 18179223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 29316828 - 29316764
Alignment:
Q  26 agctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgtttt 90  Q
    ||||||||||||||| ||||| ||||||| ||||||   || |||||||||| ||||||||||||    
T  29316828 agctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctgtttt 29316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 32837379 - 32837431
Alignment:
Q  65 ctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa 117  Q
    |||||| |||||||||||||||||||||||| ||||  |||| ||||||||||    
T  32837379 ctaatggacatgttataagctgttttcataagttctcccaaacagtctcacaa 32837431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 36125432 - 36125497
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||||||||||||||| ||||| |  || | ||||||| |||||||| ||||||||||||||||||||    
T  36125432 ataagctgttttcatatattctct--aacactctcacagaacttatgccagtagataaactcaaataa 36125497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 3067434 - 3067363
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 95  Q
    |||||||||||| ||| |||||||||||||| | |||| | || ||  |||| |||||||||||||||||||    
T  3067434 taagctatcttgaagagtttatgaaaataagctaaaaacggcttatatacatattataagctgttttcataa 3067363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 147
Target Start/End: Original strand, 3312177 - 3312216
Alignment:
Q  108 agtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  3312177 agtctcacaaaacttacgtcagtagataagctcaaataag 3312216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 7035618 - 7035519
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    |||||||||| || |||||||||||||  |||||  ||| ||||||  ||| ||||||||||| ||||| ||||   ||| |||||||||||||||||||    
T  7035618 ctatcttggaaaacttatgaaaataagcggaaaacaccttatgaactgtgtcataagctgtttccataagttcttcaaaacagtctcacaaaacttatgt 7035519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 35379071 - 35379000
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 95  Q
    ||||||||||||||||  ||||||||||||| ||||||   || ||||||| || || ||||||||||||||    
T  35379071 taagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataa 35379000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 39659508 - 39659445
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaa 142  Q
    ||||||||||||| ||| |||| ||| | || ||||| |||||||||||||||||||| |||||    
T  39659508 ataagctgttttcgtaagttctctcagacagcctcacgaaacttatgtcagtagataagctcaa 39659445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 16451132 - 16451234
Alignment:
Q  23 gtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaact 121  Q
    |||||||||||||||||| |  |||||||||| ||||||   || |||||| |||| ||||| ||||||||||| ||||  ||||  |||||||| ||||    
T  16451132 gtaagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctcccaaacggtctcacagaact 16451231  T
Q  122 tat 124  Q
    |||    
T  16451232 tat 16451234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 29628711 - 29628673
Alignment:
Q  109 gtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  29628711 gtctcacaaaacttatgacagtagataagctcaaataag 29628673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 43529895 - 43529837
Alignment:
Q  42 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 100  Q
    ||||||||||||  |||||||  || |||||||||  ||||||||||||||||||||||    
T  43529895 ttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattct 43529837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 5902560 - 5902511
Alignment:
Q  68 atgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa 117  Q
    |||||||||| ||||||||||||||||| ||||  |||| ||||||||||    
T  5902560 atgaacatgtcataagctgttttcataagttcttccaaacagtctcacaa 5902511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 12464441 - 12464404
Alignment:
Q  110 tctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  12464441 tctcacaaaacttatgttagtagatacactcaaataag 12464404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 13325636 - 13325721
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaaca 159  Q
    |||| |||||||||||||| || ||||  | || | ||||| ||||||||| ||| | ||||| |||||||||| |||||||||||    
T  13325636 atgtcataagctgttttcaaaagttctcccgaacaatctcataaaacttatatcaattgataagctcaaataagctgatccaaaca 13325721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 24347737 - 24347830
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa 117  Q
    |||| ||| |||||||| ||||||||||||| |||| ||| || |||||| | | ||||| || |||||||| |||| | ||| ||||||||||    
T  24347737 taagatatattggagaacttatgaaaataagctgaatatggcttatgaacctatcataagttgctttcataagttctctgaaatagtctcacaa 24347830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 35378588 - 35378511
Alignment:
Q  23 gtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 100  Q
    |||||| |||||||| |  ||||||||||||| |||||||  || ||||||| || || |||||||||||||| ||||    
T  35378588 gtaagcaatcttggatagcttatgaaaataagctgaaaataacttatgaacaagtcatcagctgttttcataagttct 35378511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 40682438 - 40682341
Alignment:
Q  36 gagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtag 132  Q
    ||||| ||||||||||||| ||||||   || ||||||| ||| ||||||| |||| | || ||||  |||| | |||||||||||||||||||||||    
T  40682438 gagaacttatgaaaataagttgaaaacaacttatgaacaatgtcataagctattttaacaagttctcccaaacaatctcacaaaacttatgtcagtag 40682341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 42457963 - 42458076
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaa-tgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||| |||||  |||||||||||| ||||||   | || |||| ||||| |||| |||||||||||| |||   ||| | |||||||||||||    
T  42457963 taagctatcttagagaacatatgaaaataagctgaaaacaacttattgaaaatgttttaagttgttttcataaactctcctaaacactctcacaaaactt 42458062  T
Q  123 atgtcagtagataa 136  Q
    ||| ||||| ||||    
T  42458063 atgccagtaaataa 42458076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 45229526 - 45229647
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatg-aacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||| ||||| ||||||||||||| ||||||   |||||| || |||| ||||| | ||||||||| ||||  ||||  || |  || |||||    
T  45229526 taagctatcttcgagaacttatgaaaataagctgaaaaaagctaatgaaaaatgtcataaggtcttttcataagttctcccaaacggtgtggcataactt 45229625  T
Q  123 atgtcagtagataaactcaaat 144  Q
    ||| |||||||||| |||||||    
T  45229626 atgccagtagataagctcaaat 45229647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 3978667 - 3978743
Alignment:
Q  84 ctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||||||||||  |||| | ||| ||||||| ||||||||| ||| || ||||||| ||||||| | ||||||||||    
T  3978667 ctgttttcatatgttctctgaaacagtctcataaaacttatatcattacataaactgaaataagttaatccaaacag 3978743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 9886416 - 9886456
Alignment:
Q  119 acttatgtcagtagataaactcaaataagatgatccaaaca 159  Q
    ||||||| ||||||||||| ||||||||| |||||||||||    
T  9886416 acttatgccagtagataaattcaaataagttgatccaaaca 9886456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 23974492 - 23974424
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||| ||||   ||| | |||||| || || |||||||||||||||| ||||||||    
T  23974492 ataagctgttttcataagttctccaaaacaatctcactaatctcatgtcagtagataaacccaaataag 23974424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 38787909 - 38787833
Alignment:
Q  71 aacatgttataagctgttttcataaattctgtcaaagagtctcacaaa-acttatgtcagtagataaactcaaataa 146  Q
    ||||||| |||  ||||| || ||||||||  |||| ||||||||||| |||||||||||||||||| |||| ||||    
T  38787909 aacatgtcatagactgttctcttaaattctcccaaatagtctcacaaatacttatgtcagtagataagctcacataa 38787833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 39073690 - 39073634
Alignment:
Q  90 tcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||||| ||||  |||| |||||||||||| ||||||| |||||| |||||||||||    
T  39073690 tcataagttcttccaaacagtctcacaaaaattatgtcggtagatgaactcaaataa 39073634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 41042072 - 41041984
Alignment:
Q  29 tatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa 117  Q
    ||||||||||| |||||| ||||||| ||||||   || ||| |||||| ||||| |||||  ||||||||| | ||| ||||||||||    
T  41042072 tatcttggagagtttatggaaataagttgaaaacagctgatggacatgtaataagttgtttctataaattctctgaaacagtctcacaa 41041984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 19302562 - 19302494
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||||||||  |||| | ||||||||||||||||||||||||||| ||||||||||    
T  19302562 ataagctgttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaataag 19302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 33601465 - 33601342
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||| ||||| |||||||  |||| ||||||   || ||||| | ||| ||||||||||||||||| ||||   |||||||||||||||||||    
T  33601465 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaagagtctcacaaaactt 33601366  T
Q  123 atgtcagtagataaactcaaataa 146  Q
    ||| || ||||||| |||||||||    
T  33601365 atgccaatagataagctcaaataa 33601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 27863722 - 27863656
Alignment:
Q  81 aagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||| |||| ||||| ||||||||||    
T  27863722 aagctgttttcataagttctctcaaatagtctcacaaaacttatgccagtggataagctcaaataag 27863656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 19022640 - 19022527
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| |||||||| ||||||||||||| |||| |   || ||||| || || ||||| ||||||||||||||||  |||| | ||||||||||||     
T  19022640 taagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctcccaaacaatctcacaaaactc 19022541  T
Q  123 atgtcagtagataa 136  Q
    ||||||||||||||    
T  19022540 atgtcagtagataa 19022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 33678795 - 33678908
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||||||||| || || |||||||||| ||||||   || ||||||| ||||||||| ||||||||||| ||||  ||||  ||||||||||||||    
T  33678795 taagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttgttttcataagttctcccaaattgtctcacaaaactt 33678894  T
Q  123 atgtcagtagataa 136  Q
    |||  |||||||||    
T  33678895 atgcaagtagataa 33678908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 33602082 - 33601963
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||| ||||| |||||||  |||| |||||| | || ||||| | ||| ||||||||||||||||| || |   ||||||||||| |||||||    
T  33602082 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaactt 33601983  T
Q  123 atgtcagtagataaactcaa 142  Q
    ||| |||||||||| |||||    
T  33601982 atgccagtagataagctcaa 33601963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 34035932 - 34036056
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||| ||||| ||  ||||||||| ||||||   || ||||||| ||| ||||| | ||||||||| ||||  |||  |||||||||| || |    
T  34035932 taagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttcttccaagtagtctcacaatacat 34036031  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    |||||||||||||| ||||||||||    
T  34036032 atgtcagtagataagctcaaataag 34036056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 36517594 - 36517715
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaac-atgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||| ||||||||||||  |||||||  || |||||| ||||   |||||||||| |||| ||||  |||| ||||| | |||||||    
T  36517594 taagctatcttggagaaattatgaaaataaactgaaaatagcttatgaacaatgt--caagctgttttaataagttctcccaaacagtcttagaaaactt 36517691  T
Q  123 atgtcagtagataaactcaaataa 146  Q
    ||| |||||| ||| |||||||||    
T  36517692 atgccagtagctaagctcaaataa 36517715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 44821974 - 44822110
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    ||||||||  ||||||| ||||||||||||| ||||||   || ||  |||| || |||| ||||||| | |  ||||  ||| | ||||||||||||||    
T  44821974 taagctattctggagaacttatgaaaataagttgaaaacaacttattgacattttttaagttgttttcgtgaggtctgctaaacaatctcacaaaactta 44822073  T
Q  124 tgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||||| |||||||||||||||||   ||||||||||    
T  44822074 tgtcagcagataaactcaaataagtcaatccaaacag 44822110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 31744881 - 31744956
Alignment:
Q  87 ttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacagat 162  Q
    |||||||||||||| ||||| | ||||| |||| ||| ||| ||||||||| ||||||||| | ||||||||||||    
T  31744881 ttttcataaattctttcaaacaatctcataaaatttacgtcggtagataaattcaaataagttaatccaaacagat 31744956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 33266479 - 33266417
Alignment:
Q  85 tgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||| ||||||||  |||| ||| |||||||||||||||| |||||||| ||||||||||    
T  33266479 tgttttcgtaaattctcccaaatagtttcacaaaacttatgtcggtagataagctcaaataag 33266417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 157
Target Start/End: Complemental strand, 3928052 - 3927931
Alignment:
Q  37 agaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagata 135  Q
    |||| ||||||||||||| ||||||   || ||||| || || ||||  |||||| | ||||||| ||||| ||||||||||||||||||  ||||||||    
T  3928052 agaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataaattgttttaaaaaattctctcaaatagtctcacaaaacttatgctagtagata 3927953  T
Q  136 aactcaaataagatgatccaaa 157  Q
      ||||||||||  ||||||||    
T  3927952 gcctcaaataagccgatccaaa 3927931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 4970791 - 4970710
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||| ||||||||||| ||||  |||| |||||||||| ||||||||||  |||||| ||||||||||   ||||||||||    
T  4970791 ataagttgttttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaataagtcaatccaaacag 4970710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 8094368 - 8094445
Alignment:
Q  71 aacatgttataagctgttttcataaattctgtcaaagagtctcacaa-aacttatgtcagtagataaactcaaataag 147  Q
    ||||||| |||||||||||||||||| ||| ||||| ||||||||||   ||||||  ||||||||| ||||||||||    
T  8094368 aacatgtcataagctgttttcataaaatctctcaaatagtctcacaagtgcttatgctagtagataagctcaaataag 8094445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 20526512 - 20526585
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| |||| |||||||||||| |||| ||||| |||||||||||| || |  || ||||||||||||||||||    
T  20526512 atgtgataaactgttttcataagttctctcaaacagtctcacaaaatttctaccaatagataaactcaaataag 20526585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 46280282 - 46280211
Alignment:
Q  79 ataagctgttttcataaa---ttctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||||||    ||||  |||| ||||||||||||| |||||||| |||||||||||||||||    
T  46280282 ataagctgttttcataataagttctcccaaacagtctcacaaaacatatgtcagcagataaactcaaataag 46280211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 48140270 - 48140335
Alignment:
Q  75 tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactc 140  Q
    ||||| |||||||||||||| |||||  |||| ||||||||| |||||||| || |||||||||||    
T  48140270 tgttacaagctgttttcatacattctcccaaacagtctcacataacttatgccaatagataaactc 48140335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 17944398 - 17944274
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||| ||||||||| ||||||||||| |||| ||||||   |  ||||| | ||| |||||||||||| |||| || | | ||| ||||||||||| |||    
T  17944398 taagttatcttggataatttatgaaattaagctgaaaaaagcatatgaaaagtgtcataagctgtttttataagttgtctgaaacagtctcacaaagctt 17944299  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    ||| |||||||||| || |||||||    
T  17944298 atgccagtagataagcttaaataag 17944274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 18765366 - 18765422
Alignment:
Q  90 tcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||||| ||||  |||| ||||||||||||||||||||| ||||||| |||||||||    
T  18765366 tcataagttctcccaaacagtctcacaaaacttatgtcaatagataagctcaaataa 18765422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 21568550 - 21568454
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaa 119  Q
    |||||||| |||||||| ||||| || |||| ||||||   || ||||| || |||||||||||||||||||| ||||  |||| ||||||||||||    
T  21568550 taagctatattggagaacttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaaaa 21568454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 48470115 - 48470183
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||| ||||  |||| | ||||| ||||||||||||  ||||||| ||||||||||    
T  48470115 ataagctgttttcataagttctcccaaacaatctcataaaacttatgtctatagataagctcaaataag 48470183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 25670636 - 25670517
Alignment:
Q  29 tatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa-aacttatgtc 127  Q
    |||||||||||  || |||||||||| ||||||    | || ||||||| ||||| ||||||||||| || | ||||| |||||||||| | ||||||||    
T  25670636 tatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtc 25670537  T
Q  128 agtagataaactcaaataag 147  Q
    | ||||||| ||||| ||||    
T  25670536 aatagataagctcaagtaag 25670517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 9210906 - 9210960
Alignment:
Q  93 taaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||  |||| ||||||| ||||||||| ||||||||||| ||||||||||    
T  9210906 taaattctcccaaacagtctcagaaaacttatatcagtagataagctcaaataag 9210960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 27288014 - 27288060
Alignment:
Q  75 tgttataagctgttttcataaattctgtcaaagagtctcacaaaact 121  Q
    ||||||||||||||||||||| ||||  |||| ||||||||||||||    
T  27288014 tgttataagctgttttcataagttcttccaaatagtctcacaaaact 27288060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 31338541 - 31338614
Alignment:
Q  42 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcac 115  Q
    |||||||||||||||||||| | || ||||| |||| | ||| | ||| |||||| ||| ||||||||||||||    
T  31338541 ttatgaaaataaggtgaaaacggctgatgaatatgtcaaaagttatttccataaactctctcaaagagtctcac 31338614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 41040230 - 41040303
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaa-acttatgtcagtagataaactcaaataa 146  Q
    |||| ||||||||||| |||||  |||   |||||| |||||||| |||||| |||||||||||||||||||||    
T  41040230 atgtcataagctgtttccataagctcttctaaagagcctcacaaatacttatatcagtagataaactcaaataa 41040303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 54
Target Start/End: Original strand, 47177652 - 47177681
Alignment:
Q  25 aagctatcttggagaatttatgaaaataag 54  Q
    ||||||||||||||||||||||||||||||    
T  47177652 aagctatcttggagaatttatgaaaataag 47177681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 21196342 - 21196406
Alignment:
Q  82 agctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||||||| ||||||||||   ||| ||||||||||||||||||  |||| |||| |||||||||    
T  21196342 agctgtttgcataaattcttctaaacagtctcacaaaacttatgctagtatataagctcaaataa 21196406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 24048651 - 24048679
Alignment:
Q  119 acttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||||||||||||||||||    
T  24048651 acttatgtcagtagataaactcaaataag 24048679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 33287919 - 33287979
Alignment:
Q  87 ttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||  |||| |||||||||||||||| ||||  |||||| |||| |||||    
T  33287919 ttttcataaattctcccaaatagtctcacaaaacttaggtcataagataagctcacataag 33287979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 33894642 - 33894778
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa-aactt 122  Q
    ||||||||| |||| | |||||  ||||||| ||||||   || ||| |||||| ||| |||||||||||||  |||  |||| ||||||||||   |||    
T  33894642 taagctatcctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgctt 33894741  T
Q  123 atgtcagtagataaactcaaataagatgatccaaaca 159  Q
    |||||| | ||||| |||||||||| | |||||||||    
T  33894742 atgtcatttgataagctcaaataagctaatccaaaca 33894778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 39907822 - 39907917
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttat 124  Q
    ||||||| ||||| | ||||||||||| ||||||   ||||||||||||  |||||||  ||| | || |||| ||||| |||||||||||||||||    
T  39907822 ctatcttagagaactaatgaaaataagctgaaaacagctaatgaacatg-cataagctcattttacaagttctctcaaacagtctcacaaaacttat 39907917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 45593605 - 45593681
Alignment:
Q  85 tgttttcataaattctgtcaaagagtctcacaaaacttatgtcagt-agataaactcaaataagatgatccaaacag 160  Q
    |||||| |||| ||||  |||| ||||||||||| ||||||||||| | |||||||||||||||   ||||||||||    
T  45593605 tgtttttataagttctcccaaacagtctcacaaagcttatgtcagtaatataaactcaaataagccaatccaaacag 45593681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 21367682 - 21367806
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||| ||||||||||||| ||||||   ||  |||||| ||| ||||||||||||||||| ||||  |||| |||| ||||||||||    
T  21367682 taagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctcccaaacagtcccacaaaactt 21367781  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    |||   |||||||| ||||||||||    
T  21367782 atgctggtagataatctcaaataag 21367806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 39980744 - 39980882
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaa-catgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||||||| |||||||| ||||||||||||| ||||||   || ||||| |  || ||||||||||||||||| |||| | ||| |||||||||||||||    
T  39980744 taagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaaacagtctcacaaaactt 39980843  T
Q  123 atgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    |||  ||||||||| |||||| |||   |||||||||||    
T  39980844 atgctagtagataagctcaaacaagccaatccaaacaga 39980882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 34610861 - 34610737
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||| ||| |||||||||| || ||||||   || ||||||| ||| |||||| |||||||||| ||||  |||| |||   |||||||||    
T  34610861 taagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataagcagttttcataagttctcccaaatagttgtacaaaactt 34610762  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    |||||||||||||| ||||||||||    
T  34610761 atgtcagtagataagctcaaataag 34610737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 39602265 - 39602142
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    ||||||||||| ||||| ||||||||||||| ||||||    | |||||||||| ||||||||| |||||||  |||  |||| || ||||||||||| |    
T  39602265 taagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttcataagctcttccaaatagcctcacaaaactga 39602166  T
Q  124 tgtcagtagataaactcaaataag 147  Q
    || |||||| ||| ||||||||||    
T  39602165 tgccagtagctaagctcaaataag 39602142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 18405825 - 18405763
Alignment:
Q  84 ctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||||||||||| ||||  |||| ||||||||||||||||||||||||||||| |||||||||    
T  18405825 ctgttttcataagttcttgcaaacagtctcacaaaacttatgtcagtagataagctcaaataa 18405763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 25447220 - 25447162
Alignment:
Q  103 caaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    |||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  25447220 caaacagtctcacaaaacttatgtcagtagataaactcaaataagtcaatccaaacaga 25447162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 3845617 - 3845498
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    |||| |||||||||||| ||||||||||||| ||||||    | || || |||| |||| |||| |||| |  |||| ||||| ||||||||||||||||    
T  3845617 taagttatcttggagaacttatgaaaataagctgaaaaaagattataaaaatgtcataatctgtcttcagatgttctatcaaacagtctcacaaaactta 3845518  T
Q  124 tgtcagtagataaactcaaa 143  Q
    || |||||||||| ||||||    
T  3845517 tgccagtagataagctcaaa 3845498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 24085396 - 24085269
Alignment:
Q  21 ttgtaagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaa 119  Q
    |||||||||||||||||||| || |||||||||| ||||||   |  ||||||| |   ||||||||||||||||| ||||   ||  ||||||||||||    
T  24085396 ttgtaagctatcttggagaacttgtgaaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttctccaaaccagtctcacaaaa 24085297  T
Q  120 cttatgtcagtagataaactcaaataag 147  Q
    |||||| | |||||||| ||||||||||    
T  24085296 cttatgccggtagataagctcaaataag 24085269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 31365355 - 31365240
Alignment:
Q  33 ttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagta 131  Q
    ||||||||||||||||||| || |||||| |  | ||||| || || ||||||||| ||||||| ||||  |||| ||| |||||||| ||||| || ||    
T  31365355 ttggagaatttatgaaaatgagttgaaaaagatttatgaaaattgtcataagctgtattcataagttctcccaaacagtgtcacaaaaattatgccaata 31365256  T
Q  132 gataaactcaaataag 147  Q
    ||||||||||||||||    
T  31365255 gataaactcaaataag 31365240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 53789516 - 53789406
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||| ||||||| |||||||| |||| ||||||   || ||||| | ||| ||||||||||| || || |||| ||||||  |||||||||||||    
T  53789516 taagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaaaagtgtcataagctgtttccaaaagttctctcaaag--tctcacaaaactt 53789419  T
Q  123 atgtcagtagata 135  Q
    |||||||||||||    
T  53789418 atgtcagtagata 53789406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 22667419 - 22667542
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaa-ctt 122  Q
    ||||||||||||||||  ||| | ||||||| | |||||  ||  |||| |||||||| ||||||| |||||| ||| ||||| ||||||||||   |||    
T  22667419 taagctatcttggagagcttacggaaataagctaaaaataacttctgaa-atgttatatgctgtttccataaactctctcaaacagtctcacaagtgctt 22667517  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    |||||||||||||| ||||||||||    
T  22667518 atgtcagtagataagctcaaataag 22667542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 22724058 - 22724181
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaa-ctt 122  Q
    ||||||||||||||||  ||| | ||||||| | |||||  ||  |||| |||||||| ||||||| |||||| ||| ||||| ||||||||||   |||    
T  22724058 taagctatcttggagagcttacggaaataagctaaaaataacttctgaa-atgttatatgctgtttccataaactctctcaaacagtctcacaagtgctt 22724156  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    |||||||||||||| ||||||||||    
T  22724157 atgtcagtagataagctcaaataag 22724181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 31365187 - 31365119
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||| |||||||| ||||  |||| |||||||||||||||||| || ||||||| ||||||||||    
T  31365187 ataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaaataag 31365119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 42799960 - 42799884
Alignment:
Q  85 tgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaa-ctcaaataagatgatccaaacag 160  Q
    ||||||||||| ||||  |||||||| ||||||||| |||||||||||||||| ||||||||||   ||||||||||    
T  42799960 tgttttcataagttctcccaaagagtttcacaaaacatatgtcagtagataaagctcaaataagccaatccaaacag 42799884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 46031009 - 46031129
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    ||||||||||||| |||| |||||||| ||||||   || ||||| | ||| ||| ||||||||| ||| |||| | ||| ||||||| |||||||||      
T  46031009 ctatcttggagaacttattaaaataagctgaaaacagcttatgaataatgtcataggctgttttcgtaagttctctgaaacagtctcataaaacttataa 46031108  T
Q  127 cagtagataaactcaaataag 147  Q
    || ||||||||||||||||||    
T  46031109 caatagataaactcaaataag 46031129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 49465720 - 49465644
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 100  Q
    ||||||||  ||||||| ||||| ||||||| | ||||  |||||||||||||| ||||||||||||||||| ||||    
T  49465720 taagctatactggagaacttatggaaataagcttaaaaaacctaatgaacatgtaataagctgttttcataagttct 49465644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 584118 - 584185
Alignment:
Q  80 taagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||||||||||   ||| ||||||||| ||||||||  ||||||||| ||||||||||    
T  584118 taagctgttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaataag 584185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 402593 - 402475
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    |||||||| |||| || ||||| |||| ||||||   || ||||||| ||| ||||||||||||||||  ||||  |||| |||||  ||||||||||||    
T  402593 ctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctgttttcatacgttctcccaaacagtcttgcaaaacttatgt 402494  T
Q  127 cagtagataaactcaaata 145  Q
     ||| ||||||||||||||    
T  402493 tagttgataaactcaaata 402475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 37389249 - 37389311
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataa 136  Q
    |||| ||||| ||||||||||| ||||  | ||||||||||||||||||||||| ||||||||    
T  37389249 atgtcataagttgttttcataagttctcccgaagagtctcacaaaacttatgtctgtagataa 37389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 3776390 - 3776325
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaa-aacttatgtcagtagataaactcaaa 143  Q
    ||||||||||||||||| |||| ||||| | ||||||||  ||||||| |||||||||||||||||    
T  3776390 ataagctgttttcataagttctctcaaacattctcacaattacttatgccagtagataaactcaaa 3776325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 22203445 - 22203581
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaa-atgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||| ||||||||||||  || |  | || |||  || |||| ||||||||||||||||| ||||  |||| |||||||||||| |     
T  22203445 taagctatcttggagaacttatgaaaataaactgcattaagcttaagtaaaatgtcataagctgttttcataagttctc-caaacagtctcacaaaatta 22203543  T
Q  123 atgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||| |||||||| ||| |||| | | ||||||||||    
T  22203544 atgtcggtagataagctcgaatatgttaatccaaacag 22203581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 30443912 - 30444029
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    |||| |||||||| ||||||||||||| ||||||   ||  |||| || || |||||||||||||||||  |||  |||| |||||||| ||| |||||     
T  30443912 ctatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctgttttcataagctctaccaaacagtctcaccaaatttatgc 30444011  T
Q  127 cagtagataaactcaaat 144  Q
    |||||||||| |||||||    
T  30444012 cagtagataagctcaaat 30444029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 33405160 - 33405123
Alignment:
Q  110 tctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| |||||||||||||||||||||||||||||||||    
T  33405160 tctcccaaaacttatgtcagtagataaactcaaataag 33405123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 36507142 - 36507009
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaact--tatg 125  Q
    |||| ||||||||||||| |||||||| ||||||   || || |||| || ||||||| |||||| || | ||  |||| ||||||||||| ||  |||     
T  36507142 ctattttggagaatttataaaaataagctgaaaaa--cttataaacacgtcataagctattttcagaagtcctcccaaacagtctcacaaagctcttata 36507045  T
Q  126 tcagtagataaactcaaataagatgatccaaacaga 161  Q
    ||||||||||||||||||||||   |||||||||||    
T  36507044 tcagtagataaactcaaataagccaatccaaacaga 36507009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 24684821 - 24684741
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaaca 159  Q
    ||||| ||||||||||| |||   ||||  |||||| |||||||||| |||||||||| |||||||||| | |||||||||    
T  24684821 ataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 24684741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 45541586 - 45541662
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 100  Q
    |||||||||||||| || |||||| |||||  ||||||   || |||||||||| ||||||||||||||||| ||||    
T  45541586 taagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttttcataagttct 45541662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 51929356 - 51929288
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| ||||||||| ||||||| ||||| ||| |||||||||||||| ||||| ||||  |||||||||    
T  51929356 ataatctgttttcagaaattctctcaaatagtatcacaaaacttatgccagtaaataaggtcaaataag 51929288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 53952075 - 53952139
Alignment:
Q  36 gagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattct 100  Q
    |||| |||||||||||||| ||||||   || ||||||||||||| |||||||||||||| ||||    
T  53952075 gagagtttatgaaaataagctgaaaacagctcatgaacatgttatcagctgttttcataagttct 53952139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 5436120 - 5436211
Alignment:
Q  57 gaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||| || ||||||| ||| ||||| |||||||| || ||||   ||| ||| |||||||||||||| |||| ||||||||||||||||    
T  5436120 gaaaatggcttatgaacaatgtcataagttgttttcagaagttcttcaaaacagtgtcacaaaacttatgacagttgataaactcaaataag 5436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 147
Target Start/End: Original strand, 5448544 - 5448583
Alignment:
Q  108 agtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  5448544 agtcttacaaaacttatgtcagtagataagctcaaataag 5448583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 20880492 - 20880615
Alignment:
Q  25 aagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    ||||||| |||||||| ||||||||||||| | ||||   || ||||| || || ||||||||||||||||  ||||  |||| ||||| |  |||||||    
T  20880492 aagctatattggagaacttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctgttttcataggttctcccaaatagtctaaggaaactta 20880591  T
Q  124 tgtcagtagataaactcaaataag 147  Q
    ||  ||||||||| ||||||||||    
T  20880592 tgcaagtagataagctcaaataag 20880615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 23808119 - 23808048
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 95  Q
    |||||||||||||||| |||||||||||||| ||||||    |  ||||||||| |||||||| ||||||||    
T  23808119 taagctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataagctgctttcataa 23808048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 26911699 - 26911730
Alignment:
Q  116 aaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||||||||||||||||||    
T  26911699 aaaacttatgtcagtagataaactcaaataag 26911730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 38902083 - 38902201
Alignment:
Q  26 agctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttat 124  Q
    |||||||||| |||| | ||||||||||| ||||||   |  ||||||| ||| ||| ||||||||||||||||||  |||| ||| |  ||||||||||    
T  38902083 agctatcttgaagaactcatgaaaataagttgaaaacaacgtatgaacaatgtcatatgctgttttcataaattcttccaaacagtttg-caaaacttat 38902181  T
Q  125 gtcagtagataaactcaaat 144  Q
    | |||||||||| |||||||    
T  38902182 gccagtagataagctcaaat 38902201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 20170706 - 20170632
Alignment:
Q  87 ttttcataaa-ttctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||||||||| ||||  |||| |||||||| |||||||||||| ||||||| ||||||||||   ||||||||||    
T  20170706 ttttcataaagttctaacaaacagtctcactaaacttatgtcactagataagctcaaataagccaatccaaacag 20170632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 42747775 - 42747713
Alignment:
Q  85 tgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||| ||||   ||| |||||||||| |||||||  ||||||||||||||||||||    
T  42747775 tgttttcataagttctcaaaaacagtctcacaatacttatggaagtagataaactcaaataag 42747713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 5391912 - 5391965
Alignment:
Q  42 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 95  Q
    ||||||||||||| ||||||   || |||||||||| |||||||||||||||||    
T  5391912 ttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataa 5391965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 26878266 - 26878339
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| ||||||| |||||| || |||| ||||| ||| ||||  ||||||||||||||||||| ||| ||||||    
T  26878266 atgtcataagctattttcacaagttctctcaaacagtttcacgcaacttatgtcagtagataagctcgaataag 26878339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 34235097 - 34235024
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| ||||||||| ||||||| |||| |||||  ||| | |||||||||||| ||||||||| ||| ||||||    
T  34235097 atgtcataagctgtattcataagttctctcaaacggtcacgcaaaacttatgttagtagataagctcgaataag 34235024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 35394553 - 35394516
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaa 61  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  35394553 taagctatcttgaagaatttatgaaaataagttgaaaa 35394516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 50211801 - 50211886
Alignment:
Q  75 tgttataagctgttttcataaattctgtcaaagagtctcacaa-aacttatgtcagtagataaactcaaataagatgatccaaaca 159  Q
    ||||||||| ||||||||||| |||| ||||| ||||| ||||   ||||||| ||||||||| || ||||||| | |||||||||    
T  50211801 tgttataagttgttttcataagttctctcaaacagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 50211886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 54837045 - 54837000
Alignment:
Q  68 atgaacatgttataagctgttttcataaattctgtcaaagagtctc 113  Q
    |||||||||| ||||||||||||||||||||||  |||| ||||||    
T  54837045 atgaacatgtcataagctgttttcataaattcttccaaacagtctc 54837000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 901939 - 902011
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtg-aaaatgcctaatgaacatgttataagctgttttcataa 95  Q
    |||||||| |||||||| ||||||||||||| || |||| || ||  ||| ||||||| ||||||||||||||    
T  901939 taagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataa 902011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 9832754 - 9832686
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||| || ||||  |||| ||| | ||||||||||||||| || |||| ||||||||||    
T  9832754 ataagctgttttcaaaagttctcccaaacagtttgacaaaacttatgtcaataaataagctcaaataag 9832686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 16073007 - 16072959
Alignment:
Q  112 tcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||||||||||| ||||||| ||||||||||   ||||||||||    
T  16073007 tcacaaaacttatgtcattagataagctcaaataagtcaatccaaacag 16072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 36783327 - 36783283
Alignment:
Q  103 caaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||| ||||||||||||||||| | | ||||||||||||||||||    
T  36783327 caaacagtctcacaaaacttatattaatagataaactcaaataag 36783283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 38318992 - 38319044
Alignment:
Q  41 tttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcat 93  Q
    |||||| ||||||| |||||||  || |||||||||||||||| |||||||||    
T  38318992 tttatggaaataagctgaaaatagcttatgaacatgttataagttgttttcat 38319044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 38665344 - 38665308
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaa 60  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  38665344 taagctatcttggagaatttatgaaaagaagttgaaa 38665308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 10758256 - 10758188
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||  |||||||||    
T  10758256 ataagctgttttcataaattctatcaaacagtctcacaaaacttatgttagcagataagttcaaataag 10758188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 27028846 - 27028970
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||  ||||||||||||| |||||||  || ||||| | |||  ||||||||||||| || ||||  |||| | |||||| ||||||    
T  27028846 taagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctgttttcagaatttctcccaaacaatctcactaaactt 27028945  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    ||| |||| ||||||||||||||||    
T  27028946 atgccagtggataaactcaaataag 27028970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 35534612 - 35534544
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||||| || |||| ||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  35534612 ataagctgttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaataag 35534544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 1058126 - 1058008
Alignment:
Q  29 tatcttggagaatttatgaaaataaggtgaaaatgcctaatg-aacatgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtc 127  Q
    |||||||||||| |||||||||||||  |||||   |||||| || |||| |||||| ||||||| || ||||  |||| |||||||||||||||||||     
T  1058126 tatcttggagaacttatgaaaataagcggaaaa-aactaatgaaaaatgtcataagcagttttcaaaagttctcccaaacagtctcacaaaacttatgta 1058028  T
Q  128 agtagataaactcaaataag 147  Q
    ||||||||| ||||||||||    
T  1058027 agtagataagctcaaataag 1058008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 30251453 - 30251372
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||||||| ||| ||||  |||| |||||||| |||||||||||||||||||| ||||||||||   ||||||||||    
T  30251453 ataagctgttttcgtaagttctcccaaacagtctcacgaaacttatgtcagtagataagctcaaataagccaatccaaacag 30251372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 2488018 - 2487939
Alignment:
Q  69 tgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa-aacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||| ||||||||||| ||||  |||| ||||||||||   ||||||||||||||| ||||||||||||    
T  2488018 tgaacatgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataag 2487939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 26771292 - 26771403
Alignment:
Q  36 gagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagat 134  Q
    ||||| ||||||||||||| |||||| | ||  |||| || || ||||||||||||||||| ||||  |||| |||||||||||||||||| | ||||||    
T  26771292 gagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgcccgtagat 26771391  T
Q  135 aaactcaaataa 146  Q
    || |||| ||||    
T  26771392 aagctcagataa 26771403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 43717928 - 43717865
Alignment:
Q  84 ctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    |||||||||||| ||||  |||| ||||||||||||||||||||| ||||||| ||||||||||    
T  43717928 ctgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaataag 43717865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 3537000 - 3536875
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    |||| |||||||||||| ||||| ||||||| ||||||    | ||||||| ||| |||||||||||   |||||||| || || |||| |||||| |||    
T  3537000 taagatatcttggagaacttatggaaataagctgaaaacaatttatgaacaatgtcataagctgtttctgtaaattctctcgaatagtcacacaaagctt 3536901  T
Q  123 atgtcagtagataaactcaaataaga 148  Q
    ||| |||||||||| |||||||||||    
T  3536900 atgccagtagataagctcaaataaga 3536875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 28763435 - 28763496
Alignment:
Q  75 tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataa 136  Q
    ||||||||||||||||||||| ||||  |||| ||||||||||||||||||| | |||||||    
T  28763435 tgttataagctgttttcataagttctcccaaacagtctcacaaaacttatgttactagataa 28763496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 38648425 - 38648490
Alignment:
Q  82 agctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||  |||  |||| ||||||||||||||||||||||||||||| || |||||||    
T  38648425 agctgttttcataaggtctcccaaacagtctcacaaaacttatgtcagtagataatcttaaataag 38648490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 44236878 - 44236741
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaa-ctt 122  Q
    |||||||| |||||||  ||||||||||||| |||||||  || | || |||||  | |||| |||||||| |||||  | || ||||||||||   |||    
T  44236878 taagctatattggagagcttatgaaaataagctgaaaataacttaagagcatgtcgtgagctattttcatagattctcccgaacagtctcacaagtgctt 44236779  T
Q  123 atgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||| ||||||||||||||||||||| | ||||||||||    
T  44236778 atgccagtagataaactcaaataaggtaatccaaacag 44236741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 9130294 - 9130238
Alignment:
Q  103 caaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaaca 159  Q
    |||| |||||||||||||||||| |||||||||| |||||||||| | |||||||||    
T  9130294 caaatagtctcacaaaacttatgccagtagataagctcaaataagctaatccaaaca 9130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 11376718 - 11376842
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa-aactt 122  Q
    |||||||| || |||||| |||||||||||| ||||||      || ||||||| | ||||| ||||||||| ||||  |||| |||||||||| |||||    
T  11376718 taagctattttagagaatctatgaaaataagctgaaaacaagatattaacatgtcacaagctattttcataagttctcccaaatagtctcacaagaactt 11376817  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    || ||||||||||| ||||||||||    
T  11376818 atatcagtagataagctcaaataag 11376842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 15180616 - 15180691
Alignment:
Q  84 ctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||| |||||||  |||| ||||||| |||||||||| |||||||||||||||||||||   ||||||||||    
T  15180616 ctgttttcagaaattctc-caaaaagtctcataaaacttatggcagtagataaactcaaataagccaatccaaacag 15180691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 15247811 - 15247708
Alignment:
Q  45 tgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaa 143  Q
    |||||||||| ||||||   |||||||||| ||| ||||| |||||||||||||| | | |   | ||||||||||||||||| |||||||||| |||||    
T  15247811 tgaaaataagttgaaaaaaactaatgaacaatgtcataagttgttttcataaattttcttattcattctcacaaaacttatgtaagtagataaattcaaa 15247712  T
Q  144 taag 147  Q
    ||||    
T  15247711 taag 15247708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 30657747 - 30657696
Alignment:
Q  108 agtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaaca 159  Q
    |||||||||||| |||||||| ||||||||||||||||||  ||||||||||    
T  30657747 agtctcacaaaatttatgtcattagataaactcaaataagtcgatccaaaca 30657696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 38750428 - 38750495
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    ||||| |||| |||||| |||| ||||| | ||||||||||||||||  |||||||||||||||||||    
T  38750428 ataaggtgttctcataagttctttcaaataatctcacaaaacttatgcaagtagataaactcaaataa 38750495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 5069730 - 5069800
Alignment:
Q  42 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtct 112  Q
    ||||||||||||| |||||||| || |||||||||||||||| ||||| |||||  ||| ||||| |||||    
T  5069730 ttatgaaaataagctgaaaatgacttatgaacatgttataagatgtttccataagctctctcaaacagtct 5069800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 35749567 - 35749501
Alignment:
Q  81 aagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||| |||| ||||| || ||| |||||||||||||| ||||||| ||||| ||||    
T  35749567 aagctgttttcataagttctctcaaacagcctcgcaaaacttatgtcaatagataagctcaattaag 35749501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 38602400 - 38602479
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    |||||||||||  |||| ||||  |||| || |||||||||||||||||||||||||| ||||||||||   ||||||||||    
T  38602400 ataagctgttt--ataagttctcccaaacagcctcacaaaacttatgtcagtagataagctcaaataagtcaatccaaacag 38602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 1930050 - 1930163
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||| ||  || |||||||||| ||||||   || ||||||| ||| |||| ||||||||| || ||||  |||| | | |||||||||||    
T  1930050 taagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaataatgtcacaaaactt 1930149  T
Q  123 atgtcagtagataa 136  Q
    ||||||||||||||    
T  1930150 atgtcagtagataa 1930163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 6525912 - 6525957
Alignment:
Q  103 caaagagtctcacaaaacttatgtcagtagataaactcaaataaga 148  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||    
T  6525912 caaacagtcacacaaaacttatgttagtagataaactcaaataaga 6525957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 11415169 - 11415294
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaa-aactt 122  Q
    ||||||||| | |||| ||| |||||||||| ||| |||  || ||| |||||||||||||||||| |||||| ||| | ||| | ||||||||  ||||    
T  11415169 taagctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgtttccataaactctctaaaacaatctcacaagtactt 11415268  T
Q  123 atgtcagtagataaactcaaataaga 148  Q
    |||| |||| |||| | |||||||||    
T  11415269 atgttagtaaataagcacaaataaga 11415294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 32841022 - 32840917
Alignment:
Q  43 tatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactca 141  Q
    |||||||||||| ||||||   || ||||||| ||| ||||| ||||||||||| ||||  |||| |||||| |||||||| ||| ||||||||| ||||    
T  32841022 tatgaaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtctcgcaaaacttgtgtgagtagataagctca 32840923  T
Q  142 aataag 147  Q
    | ||||    
T  32840922 agtaag 32840917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 43368735 - 43368618
Alignment:
Q  44 atgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaa-acttatgtcagtagataaactcaa 142  Q
    ||||||||||| |||||||  ||||||||||||| ||||| |||||||||||  | |  |||  |||||||||||  ||||||| |||||||||  ||||    
T  43368735 atgaaaataagttgaaaatagctaatgaacatgtcataagttgttttcataagctgttacaaccagtctcacaaatgcttatgttagtagataagatcaa 43368636  T
Q  143 ataagatgatccaaacag 160  Q
    |||||   ||||||||||    
T  43368635 ataagtcaatccaaacag 43368618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 36963351 - 36963271
Alignment:
Q  81 aagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    ||||||||||  ||| ||||  |||| |||||||||||||||||| |||||||| | ||||||||||   |||||||||||    
T  36963351 aagctgtttttgtaagttctcccaaacagtctcacaaaacttatgccagtagattagctcaaataagccaatccaaacaga 36963271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 41589653 - 41589724
Alignment:
Q  75 tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    ||||||||| ||||||||||| ||||   ||| ||||||| ||| |||||||||||||| || |||||||||    
T  41589653 tgttataagttgttttcataagttctccaaaacagtctcaaaaagcttatgtcagtagacaagctcaaataa 41589724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 12497066 - 12497004
Alignment:
Q  84 ctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    ||||||| | || |||| ||||| |||||||||||||||||| ||| |||||| |||||||||    
T  12497066 ctgtttttagaagttctctcaaacagtctcacaaaacttatgccaggagataagctcaaataa 12497004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 32213221 - 32213271
Alignment:
Q  110 tctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 160  Q
    ||||||||||||||| |||||| |||| |||||||||||  ||||||||||    
T  32213221 tctcacaaaacttatatcagtatataagctcaaataagacaatccaaacag 32213271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 37822653 - 37822591
Alignment:
Q  85 tgttttcataaattctgtcaaagagtctcacaaa-acttatgtcagtagataaactcaaataa 146  Q
    |||||| ||||||| | ||||| ||||||||||| | |||||||| |||||||||||||||||    
T  37822653 tgttttaataaattttctcaaacagtctcacaaataattatgtcattagataaactcaaataa 37822591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 42893489 - 42893407
Alignment:
Q  79 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaacaga 161  Q
    |||||||||||| |||| ||||  |||| | |  ||||||| ||||| | ||||||||||||||||||| | |||||||||||    
T  42893489 ataagctgtttttataagttctcccaaacactagcacaaaaattatgccggtagataaactcaaataagttaatccaaacaga 42893407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 922403 - 922338
Alignment:
Q  82 agctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||  ||||||| |  |||| ||| |||||||||||| ||||||| |||||||||||||||    
T  922403 agctgtttctataaattatcccaaacagtatcacaaaacttaggtcagtatataaactcaaataag 922338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 1096592 - 1096629
Alignment:
Q  110 tctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||||||||||||||||| || |||||||||||||||    
T  1096592 tctcacaaaacttatgtcactaaataaactcaaataag 1096629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 12851209 - 12851262
Alignment:
Q  42 ttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataa 95  Q
    |||||||||||||  |||||   || ||||||||||||||||||||||||||||    
T  12851209 ttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataa 12851262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 13822035 - 13821986
Alignment:
Q  87 ttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataa 136  Q
    |||| ||||||| | ||||| ||||||||||||||||||||| |||||||    
T  13822035 tttttataaattttctcaaacagtctcacaaaacttatgtcactagataa 13821986  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 27754419 - 27754520
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacatgttataagctgttttcataaattctgtcaaagagtctcacaaaactta 123  Q
    |||||||| |||||||  ||||||||||||| ||||     || || | ||||| |||| |||||||||||| ||||  |||| ||||||||||||||||    
T  27754419 taagctattttggagagcttatgaaaataagctgaacgcaacttataatcatgtcataaactgttttcataagttctcccaaatagtctcacaaaactta 27754518  T
Q  124 tg 125  Q
    ||    
T  27754519 tg 27754520  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 43045776 - 43045643
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    |||| |||||||| ||||||||||||| ||||||   || || || || ||| ||||||||||||||||  |||   ||| ||||||||||| ||||||     
T  43045776 ctatattggagaacttatgaaaataagttgaaaaaagcttattaaaattgttgtaagctgttttcataagatctccaaaacagtctcacaaatcttatgc 43045677  T
Q  127 cagtagataaactcaaataagatgatccaaacag 160  Q
     ||||||||| || |||||||   ||||||||||    
T  43045676 tagtagataagcttaaataagccaatccaaacag 43045643  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 12976279 - 12976351
Alignment:
Q  75 tgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 147  Q
    ||||| |||||||| |||||| ||||   ||| ||||||||||| ||||||  ||||||||| ||||||||||    
T  12976279 tgttagaagctgttctcataagttctactaaacagtctcacaaaccttatgctagtagataagctcaaataag 12976351  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 16915875 - 16915839
Alignment:
Q  110 tctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||||||||| |||||| |||||||||||||||||||    
T  16915875 tctcacaaaatttatgtaagtagataaactcaaataa 16915839  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 31716282 - 31716158
Alignment:
Q  24 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 122  Q
    ||||||||||||||||| ||||  ||||||| ||||||   || ||||| | ||| |||||||||||||| || ||||   ||| ||||||| ||||  |    
T  31716282 taagctatcttggagaagttatagaaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagttctccgaaacagtctcaaaaaaaat 31716183  T
Q  123 atgtcagtagataaactcaaataag 147  Q
    ||| || ||||||| ||||||||||    
T  31716182 atgccaatagataagctcaaataag 31716158  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 35644039 - 35643919
Alignment:
Q  28 ctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaacat-gttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgt 126  Q
    |||| |||||||  ||||||||||||| ||||||   || ||||| || || |||| || ||||||||| || |  |||| |||||||||||| |||||     
T  35644039 ctatattggagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctcacaaaaattatgc 35643940  T
Q  127 cagtagataaactcaaataag 147  Q
    |||||||||| | ||||||||    
T  35643939 cagtagataagcccaaataag 35643919  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 41442464 - 41442416
Alignment:
Q  68 atgaacatgttataagctgttttcataaattctgtcaaagagtctcaca 116  Q
    |||||||||| ||||  ||||||||||| |||||||||| |||||||||    
T  41442464 atgaacatgtcataaattgttttcataagttctgtcaaacagtctcaca 41442416  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 24687 - 24759
Alignment:
Q  74 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 146  Q
    |||| |||||||||||| |||| ||||  |||| ||||||||||||| |||| || ||||||  |||||||||    
T  24687 atgtcataagctgttttgataagttctcccaaacagtctcacaaaacatatgccaatagatacgctcaaataa 24759  T

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