View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4892_low_8 (Length: 319)
Name: NF4892_low_8
Description: NF4892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4892_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 18 - 305
Target Start/End: Original strand, 26321960 - 26322247
Alignment:
| Q |
18 |
acaacgaacctgagtttgtttgagcttaatcaaaagctctttctgaacagaaaaagcttcttttaccctattggtgacatccagcacctgtccaccaata |
117 |
Q |
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| T |
26321960 |
acaacgaacctgagtttgtttgagcttaatcaaaagctctttctgaacagaaaaagcttcttttaccctattggtgacatccagcacctgtccaccaata |
26322059 |
T |
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| Q |
118 |
atatcggcagcttttgaaagcctaccgacgtattggtcgatcagatcgacgaatgcaacaacggatggatcggaagccgcatcggagccgtcggacgccg |
217 |
Q |
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|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
26322060 |
atatcggcagctttcgaaagcctactgacgtattggtcgatcagatcgacgaatgcaacaacggatggatcggaagccgcatcggaggcgtcggacgccg |
26322159 |
T |
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| Q |
218 |
aagcggaatggtggattccggtggataatgcttctaagcgtgttaccgccgattccaatcgctttatgagagtttcatccatgatgat |
305 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26322160 |
aagaggaatggtggattccggtggataatgcttctaagcgtgttaccgccgattccaatcgctttatgagagtttcatccatgatgat |
26322247 |
T |
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