View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4893-Insertion-10 (Length: 288)
Name: NF4893-Insertion-10
Description: NF4893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4893-Insertion-10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 7 - 288
Target Start/End: Complemental strand, 37336259 - 37335979
Alignment:
| Q |
7 |
agtttgaccatattatctctttgaatatagaaataaccgagcacgggtacaatttaattaattcatccacatgtgtcattaaaaatagctcttcgatcca |
106 |
Q |
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| T |
37336259 |
agtttgaccatattatctctttgaatatagaaataaccgaacacgggtacaatttaattaattcatccacatatgtcattaaaaatagctcttcgatcca |
37336160 |
T |
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| Q |
107 |
ctatcaatgagttattgcatagagatataacttttttaaaaaattagcttcaaaagtttatcaagagcaaacactaatttctatcattttttcattctct |
206 |
Q |
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| T |
37336159 |
ctatcaataggttattacatagagatacaaattttttaaaaaattagcttcaaaagtttttcaagagcaaacactaatttctat-attttttcattctct |
37336061 |
T |
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| Q |
207 |
tcccatgaataaaagagttgctaaagtgatcaataaattatttctaattgctctaagcaatctccaatttctctaatttaat |
288 |
Q |
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| T |
37336060 |
tcccatgaataaaagagttgctaaagtgatcaataaattatttctaattgctctaagcaatctccaatttctctaatttaat |
37335979 |
T |
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Target: chr3 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 23895048 - 23895135
Alignment:
| Q |
147 |
aaattagcttcaaaagtttatcaagagcaaacactaatttctatca--ttttttcattctcttcccatgaataaaagagttgctaaag |
232 |
Q |
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| T |
23895048 |
aaattagcttcaaatgttcttcaaaaacaaactctaatttctaccattttttttcattctcttccgttgaacaagagagttgcaaaag |
23895135 |
T |
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