View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4893_low_11 (Length: 225)
Name: NF4893_low_11
Description: NF4893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4893_low_11 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 23 - 225
Target Start/End: Complemental strand, 52730979 - 52730777
Alignment:
| Q |
23 |
gttcaggaaggagaggccagctattactttcaactttctcttgcagttctttggtcttgcccttgtcgggtatgcaaattttcttttcccactcataacc |
122 |
Q |
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| T |
52730979 |
gttcaggaaggagaggccagctattactttcaactttctcttgcagttctttggtcttgcccttgtcgggtatgcaaattttcttttcccactcataacc |
52730880 |
T |
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| Q |
123 |
tacaaatcattagttagttaatttaaagtaaaataagaagaaaaatcgatggaaatcatggttttaaattgtgtttgtggttataccgtgaaactattat |
222 |
Q |
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| T |
52730879 |
tacaaatcattagttagttaatttaaagtaaaataagaagaaaaatcgatggaaatcatggttttaaattgtgtttgtggttataccgtgaaactattat |
52730780 |
T |
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| Q |
223 |
att |
225 |
Q |
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| T |
52730779 |
att |
52730777 |
T |
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