View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4893_low_4 (Length: 342)
Name: NF4893_low_4
Description: NF4893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4893_low_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 11 - 342
Target Start/End: Complemental strand, 37336853 - 37336519
Alignment:
| Q |
11 |
ttatactatgagatgtttatggttgtttgtttgtaattggagtcggggaaatcaatggtaacgatgtaagatgtgtgagtcatgtgagtaaaatgaagat |
110 |
Q |
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| T |
37336853 |
ttatactatgagatgtttatggttgtttgtttgtaattgaagtcggggaaatcaatggtaacgatgtaagatgtgtgagtcatgtgagtaaaatgaagat |
37336754 |
T |
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| Q |
111 |
gtgcaatttgtaacatttcactttca--atatacatctatagaaaaaagaggaattaaagtccatgtcgatttactatttgccaaattacttgctgttat |
208 |
Q |
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| T |
37336753 |
gtgcaatttgtaacatttcactttgaatatatacatctatagaaaaaagaggaattaaagtccatgtcgatgtactatttgccaaaatacttgctgttat |
37336654 |
T |
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| Q |
209 |
tattttcaat-nnnnnnnggtgcttgctgtttttagcatttgactttagtttactttatggagatcaatctgaatcttcttcatatcgatgattttaaaa |
307 |
Q |
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| T |
37336653 |
tattttcaataaaaaaaaggtgcttgctgtttttagcatttgactttagtttactttatggagatcaatctgaatcttcttcatatcgatgattttaaaa |
37336554 |
T |
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| Q |
308 |
ttaatccagaattttgttctttgtaaagtatggaa |
342 |
Q |
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| T |
37336553 |
ataatccagaattttgttctttgtaaagtatggaa |
37336519 |
T |
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