View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4894-Insertion-7 (Length: 458)
Name: NF4894-Insertion-7
Description: NF4894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4894-Insertion-7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 377; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 8 - 458
Target Start/End: Original strand, 33804174 - 33804623
Alignment:
| Q |
8 |
ggccatttaagatttttaatactaggtgcgtagattaatcaaacctgtgtatttcacaggtgcaatgtacgtgacctatatgaagagtgaatggacaaga |
107 |
Q |
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| T |
33804174 |
ggccatttaagatttttaatactaggtgcgtagattaatcaaacctgtgtatttcacaggtgcaatgtacctgacctatatgaagagtgaatggacaaga |
33804273 |
T |
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| Q |
108 |
taattgtgnnnnnnnaggagaagataattgttgttagatggtaaattatcagcttaatatannnnnnnnnnnatcgaagacactttatttggtatgacct |
207 |
Q |
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| T |
33804274 |
taattgtgtttttttaggagaagataattgttgttagatggtaaattatcagcttaatat-tttttttttttatcgaagacactttatttggtatgacct |
33804372 |
T |
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| Q |
208 |
aggatgtaacgataaattaaactaaaatatagtataccctagacgacctgaattaaataaagcaggagtattagcagcatattcactcatacgaaattat |
307 |
Q |
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| T |
33804373 |
aggatgtaacgataaattaaactaaaatatagtatacccgagacgacctgaattaaataaagcaggagtattagcagcatattcactcatacgaaattat |
33804472 |
T |
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| Q |
308 |
ggcaagtctttcaattttgaggaaagagttttcacctcatacgaatgaaactcgtattaagtgagatccacgttcatttaagtcaataattaagaaaata |
407 |
Q |
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| T |
33804473 |
ggcaagtctttcaattttgaggaaagagttttcacctcatacgaatgaaactcgtattaagtgagatccacgttcatttaagtcaataattaagaaaata |
33804572 |
T |
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| Q |
408 |
ttactagtggaaaagaaaaatagatagattatgaatttgttttcctgaccc |
458 |
Q |
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| T |
33804573 |
ttactagtggaaaagaaaaatagatagagtatgaatttgttttcctgaccc |
33804623 |
T |
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