View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4895_low_13 (Length: 240)
Name: NF4895_low_13
Description: NF4895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4895_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 9192530 - 9192735
Alignment:
| Q |
1 |
tgcagtttctcaaagagatgcaacattaaaactcaatgcctaaagggcatggcgttatgggttaaaataaggtaaaaaacagcatggagctaatactatg |
100 |
Q |
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| T |
9192530 |
tgcagtttctcaaagagatgcaacattaaaactcaatgcctaaagggcatggcgttatgggttaaaataaggtaaaaaacagcatggagctaatactatg |
9192629 |
T |
|
| Q |
101 |
gattttaatgctctgtcccttctttatgccttggtagtcgagtgttttaaatgctatatacaggccctctctctttttaaacctaagaaacattcattct |
200 |
Q |
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| T |
9192630 |
gattttaatgctctgtcccttctttatgccttggtagtcgagtgttttaaatgctatatacaggccctctctctttttaaacctaagaaacattcattct |
9192729 |
T |
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| Q |
201 |
catcac |
206 |
Q |
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|||||| |
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| T |
9192730 |
catcac |
9192735 |
T |
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