View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4898_high_6 (Length: 252)
Name: NF4898_high_6
Description: NF4898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4898_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 45721486 - 45721716
Alignment:
| Q |
14 |
aaggataaaatcctatgcaaaaatttagtaaataaataaattgactttataggcacaattgatatttatatagctaaagattatgggttatggtctcact |
113 |
Q |
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| T |
45721486 |
aaggataaaatcctatgcaaaaatttagtaaataaataaattgactttataggcacgattgatatttatatagctaaagattatgggttatggtctcact |
45721585 |
T |
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| Q |
114 |
ttaactttttctctcataatgttggttttttaatgtgtcacattattagagcctgaggtacaagtgcgacattcgggtaaaacaacaagataaagaaata |
213 |
Q |
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| T |
45721586 |
ttaactttttctctcataatgttggttttttaatgtgtcacattattagagcctgaggtacaagtgcgacattcgggtaaaacaacaagataaagaaata |
45721685 |
T |
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| Q |
214 |
tgacctgggataaaattaaactttatgatga |
244 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
45721686 |
tgacctgggataaaattaaactttatgatga |
45721716 |
T |
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