View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4899_high_21 (Length: 237)

Name: NF4899_high_21
Description: NF4899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4899_high_21
NF4899_high_21
[»] chr8 (53 HSPs)
chr8 (43-219)||(25192229-25192405)
chr8 (43-98)||(25566842-25566897)
chr8 (43-98)||(15816132-15816187)
chr8 (49-98)||(4948659-4948708)
chr8 (49-98)||(14134706-14134755)
chr8 (43-98)||(2572059-2572114)
chr8 (47-98)||(8342977-8343028)
chr8 (43-86)||(22595995-22596038)
chr8 (43-98)||(22651977-22652032)
chr8 (43-98)||(29510307-29510362)
chr8 (19-98)||(40332168-40332247)
chr8 (43-88)||(4611535-4611580)
chr8 (49-98)||(7658470-7658519)
chr8 (43-100)||(18407720-18407777)
chr8 (49-98)||(20679398-20679447)
chr8 (43-88)||(34897086-34897131)
chr8 (50-95)||(44067524-44067569)
chr8 (48-88)||(3025557-3025597)
chr8 (50-98)||(11927089-11927137)
chr8 (54-98)||(18170485-18170529)
chr8 (54-98)||(18634053-18634097)
chr8 (50-98)||(18646180-18646228)
chr8 (50-98)||(20873077-20873125)
chr8 (42-86)||(22197757-22197801)
chr8 (46-86)||(30077402-30077442)
chr8 (43-83)||(41831958-41831998)
chr8 (43-98)||(4298889-4298944)
chr8 (47-86)||(8343321-8343360)
chr8 (49-88)||(13203648-13203687)
chr8 (43-98)||(13436967-13437022)
chr8 (43-98)||(13844599-13844654)
chr8 (19-86)||(21465389-21465456)
chr8 (43-98)||(24613522-24613576)
chr8 (43-86)||(30271306-30271349)
chr8 (43-98)||(31236580-31236635)
chr8 (43-86)||(36450769-36450812)
chr8 (52-98)||(22493504-22493550)
chr8 (50-88)||(34201059-34201097)
chr8 (50-95)||(8017494-8017539)
chr8 (43-88)||(14731713-14731758)
chr8 (43-88)||(24362215-24362260)
chr8 (41-98)||(33382022-33382079)
chr8 (42-75)||(35519833-35519866)
chr8 (43-88)||(39954292-39954337)
chr8 (43-80)||(41838144-41838181)
chr8 (50-98)||(4786341-4786389)
chr8 (50-82)||(6211456-6211488)
chr8 (42-86)||(7442845-7442889)
chr8 (50-98)||(11944673-11944721)
chr8 (48-84)||(12559123-12559159)
chr8 (50-98)||(12985400-12985448)
chr8 (50-98)||(24669441-24669489)
chr8 (43-95)||(28745499-28745551)
[»] scaffold0027 (1 HSPs)
scaffold0027 (43-128)||(46683-46776)
[»] chr4 (53 HSPs)
chr4 (43-98)||(21945504-21945559)
chr4 (43-98)||(8423721-8423776)
chr4 (43-98)||(54580026-54580081)
chr4 (42-98)||(29205444-29205500)
chr4 (43-98)||(30298947-30299003)
chr4 (43-98)||(30327815-30327871)
chr4 (43-98)||(2361978-2362033)
chr4 (43-98)||(23292989-23293044)
chr4 (42-86)||(11596367-11596411)
chr4 (43-98)||(49431026-49431082)
chr4 (43-86)||(3947781-3947824)
chr4 (47-86)||(28964263-28964302)
chr4 (43-86)||(37203265-37203308)
chr4 (43-86)||(51701259-51701302)
chr4 (45-98)||(12895119-12895172)
chr4 (43-88)||(15029766-15029811)
chr4 (50-87)||(32910559-32910596)
chr4 (49-98)||(35157988-35158037)
chr4 (50-98)||(6485614-6485662)
chr4 (50-98)||(12895277-12895325)
chr4 (42-86)||(14465090-14465134)
chr4 (43-95)||(38148731-38148783)
chr4 (47-95)||(47263991-47264039)
chr4 (42-89)||(32273538-32273585)
chr4 (49-88)||(36635331-36635370)
chr4 (43-86)||(38847027-38847070)
chr4 (50-88)||(903930-903968)
chr4 (50-84)||(20743295-20743329)
chr4 (50-88)||(22440613-22440651)
chr4 (50-88)||(24343515-24343553)
chr4 (48-98)||(30982881-30982931)
chr4 (50-84)||(31243565-31243599)
chr4 (50-88)||(40179649-40179687)
chr4 (50-84)||(50848320-50848354)
chr4 (49-94)||(4383375-4383419)
chr4 (43-80)||(11651155-11651192)
chr4 (49-98)||(12797341-12797389)
chr4 (42-87)||(16189709-16189754)
chr4 (43-88)||(40613451-40613496)
chr4 (98-130)||(715543-715575)
chr4 (43-86)||(715622-715666)
chr4 (98-130)||(752869-752901)
chr4 (43-86)||(752948-752992)
chr4 (50-98)||(5775361-5775409)
chr4 (50-94)||(14126118-14126162)
chr4 (50-98)||(16303269-16303317)
chr4 (21-98)||(19312310-19312391)
chr4 (43-87)||(24999045-24999089)
chr4 (48-88)||(28158014-28158054)
chr4 (97-129)||(28470453-28470485)
chr4 (50-86)||(36386226-36386262)
chr4 (43-98)||(42640527-42640585)
chr4 (43-87)||(56257934-56257978)
[»] chr1 (72 HSPs)
chr1 (43-98)||(1486712-1486767)
chr1 (43-86)||(113300-113343)
chr1 (43-98)||(21378579-21378634)
chr1 (43-98)||(22515890-22515945)
chr1 (43-98)||(24577189-24577244)
chr1 (43-98)||(38078664-38078719)
chr1 (42-96)||(48450592-48450646)
chr1 (43-88)||(398778-398823)
chr1 (44-98)||(5944283-5944339)
chr1 (45-98)||(6612174-6612227)
chr1 (43-96)||(31015044-31015097)
chr1 (43-95)||(18190114-18190166)
chr1 (50-98)||(40258936-40258984)
chr1 (43-98)||(1704995-1705050)
chr1 (43-98)||(1864883-1864938)
chr1 (47-98)||(16927188-16927239)
chr1 (51-98)||(18337338-18337385)
chr1 (43-98)||(19058859-19058914)
chr1 (43-98)||(22881619-22881674)
chr1 (43-86)||(23738679-23738722)
chr1 (43-86)||(31672910-31672953)
chr1 (43-98)||(36878462-36878517)
chr1 (43-98)||(37598833-37598887)
chr1 (43-98)||(42359452-42359507)
chr1 (43-98)||(46348386-46348441)
chr1 (43-85)||(12443476-12443518)
chr1 (50-88)||(22794091-22794129)
chr1 (43-88)||(5898279-5898324)
chr1 (43-88)||(17754312-17754357)
chr1 (48-93)||(23531786-23531831)
chr1 (43-84)||(30847737-30847778)
chr1 (43-88)||(40181872-40181917)
chr1 (47-95)||(8010293-8010341)
chr1 (50-98)||(47989505-47989553)
chr1 (43-98)||(51410025-51410081)
chr1 (43-98)||(2896124-2896179)
chr1 (43-98)||(5376503-5376558)
chr1 (49-88)||(7918224-7918263)
chr1 (43-98)||(9629903-9629958)
chr1 (43-98)||(25272483-25272538)
chr1 (43-98)||(28273091-28273146)
chr1 (49-88)||(34298443-34298482)
chr1 (43-98)||(41877473-41877528)
chr1 (42-88)||(6427350-6427396)
chr1 (48-98)||(7353496-7353546)
chr1 (44-82)||(21366039-21366077)
chr1 (50-88)||(40747786-40747824)
chr1 (52-98)||(44482240-44482286)
chr1 (49-98)||(9828051-9828100)
chr1 (45-94)||(15323166-15323215)
chr1 (43-98)||(17778550-17778602)
chr1 (43-97)||(18471299-18471355)
chr1 (43-88)||(19324563-19324608)
chr1 (43-88)||(25098568-25098613)
chr1 (42-87)||(25452162-25452207)
chr1 (43-84)||(26238129-26238170)
chr1 (45-89)||(34741829-34741874)
chr1 (98-135)||(35702535-35702572)
chr1 (50-83)||(42325568-42325601)
chr1 (56-97)||(46914043-46914084)
chr1 (50-98)||(1815265-1815313)
chr1 (100-128)||(5898206-5898234)
chr1 (43-86)||(13011230-13011274)
chr1 (50-98)||(13997891-13997939)
chr1 (43-83)||(23621972-23622012)
chr1 (47-83)||(23653004-23653040)
chr1 (43-98)||(24462679-24462735)
chr1 (52-88)||(25361896-25361932)
chr1 (50-98)||(28674808-28674856)
chr1 (48-88)||(34712396-34712436)
chr1 (50-98)||(41017407-41017455)
chr1 (43-98)||(48148040-48148096)
[»] chr2 (53 HSPs)
chr2 (49-98)||(12668426-12668475)
chr2 (43-98)||(30335418-30335473)
chr2 (43-128)||(21374673-21374757)
chr2 (43-98)||(2438722-2438777)
chr2 (43-98)||(11223866-11223921)
chr2 (43-98)||(36756347-36756402)
chr2 (49-98)||(15657871-15657920)
chr2 (43-88)||(28677910-28677955)
chr2 (43-95)||(12940941-12940993)
chr2 (47-95)||(30717536-30717584)
chr2 (43-98)||(18841016-18841071)
chr2 (43-98)||(20539677-20539732)
chr2 (43-98)||(37558978-37559033)
chr2 (43-98)||(42832279-42832334)
chr2 (50-96)||(30404855-30404901)
chr2 (50-95)||(10535765-10535810)
chr2 (43-88)||(21616763-21616808)
chr2 (50-91)||(23921261-23921302)
chr2 (52-84)||(11308021-11308053)
chr2 (50-98)||(15972881-15972929)
chr2 (42-98)||(18420437-18420493)
chr2 (43-98)||(19536400-19536456)
chr2 (43-87)||(21782832-21782876)
chr2 (43-98)||(974748-974803)
chr2 (48-95)||(4882702-4882749)
chr2 (43-98)||(23718027-23718082)
chr2 (43-98)||(24105699-24105754)
chr2 (43-86)||(24894390-24894433)
chr2 (43-85)||(27460027-27460070)
chr2 (43-98)||(29176496-29176551)
chr2 (43-86)||(38117174-38117217)
chr2 (43-86)||(39323265-39323308)
chr2 (43-98)||(44860321-44860376)
chr2 (43-97)||(6940256-6940310)
chr2 (48-98)||(34691808-34691858)
chr2 (48-98)||(34714220-34714270)
chr2 (50-88)||(40361767-40361805)
chr2 (49-98)||(5367199-5367248)
chr2 (61-98)||(28341872-28341909)
chr2 (50-87)||(28412358-28412395)
chr2 (43-88)||(31808078-31808123)
chr2 (43-88)||(37411257-37411302)
chr2 (42-86)||(1886893-1886937)
chr2 (45-98)||(5040735-5040790)
chr2 (43-98)||(14996226-14996282)
chr2 (43-87)||(18276522-18276566)
chr2 (50-98)||(18421971-18422019)
chr2 (43-98)||(21624267-21624323)
chr2 (98-130)||(26769611-26769643)
chr2 (50-98)||(31026703-31026751)
chr2 (50-98)||(34006994-34007042)
chr2 (43-87)||(36409641-36409685)
chr2 (46-98)||(39026822-39026874)
[»] chr3 (69 HSPs)
chr3 (43-99)||(26508111-26508167)
chr3 (43-98)||(1509540-1509595)
chr3 (43-86)||(4987306-4987349)
chr3 (43-98)||(7928451-7928506)
chr3 (51-98)||(20503474-20503521)
chr3 (47-98)||(28918006-28918057)
chr3 (43-98)||(51206356-51206411)
chr3 (43-85)||(14979182-14979224)
chr3 (43-97)||(21256990-21257044)
chr3 (48-98)||(25948890-25948940)
chr3 (43-83)||(3164043-3164083)
chr3 (43-98)||(8383258-8383313)
chr3 (43-98)||(10954953-10955008)
chr3 (43-98)||(15796297-15796352)
chr3 (43-86)||(21479119-21479162)
chr3 (43-86)||(34910318-34910361)
chr3 (43-98)||(49651789-49651844)
chr3 (43-98)||(55401076-55401131)
chr3 (49-98)||(17005622-17005671)
chr3 (49-98)||(18426956-18427005)
chr3 (50-95)||(24205047-24205092)
chr3 (50-98)||(4201404-4201452)
chr3 (42-98)||(8039838-8039894)
chr3 (43-83)||(16789668-16789708)
chr3 (50-98)||(20691327-20691375)
chr3 (43-95)||(34307786-34307838)
chr3 (43-95)||(35994744-35994795)
chr3 (43-98)||(7614418-7614473)
chr3 (43-98)||(8587024-8587079)
chr3 (43-86)||(10268501-10268544)
chr3 (48-87)||(11251984-11252023)
chr3 (43-86)||(14209114-14209157)
chr3 (43-98)||(16000019-16000074)
chr3 (43-98)||(27505247-27505302)
chr3 (43-98)||(28812516-28812571)
chr3 (49-88)||(29508451-29508490)
chr3 (43-98)||(34185126-34185181)
chr3 (50-85)||(41319326-41319361)
chr3 (42-88)||(1550140-1550186)
chr3 (43-97)||(10690266-10690320)
chr3 (50-84)||(12704674-12704708)
chr3 (56-98)||(14338486-14338528)
chr3 (50-88)||(16192763-16192801)
chr3 (50-84)||(21149075-21149109)
chr3 (43-89)||(21861570-21861616)
chr3 (48-98)||(32429383-32429433)
chr3 (48-98)||(38731224-38731274)
chr3 (43-77)||(40052333-40052367)
chr3 (43-96)||(4990972-4991025)
chr3 (98-131)||(8842418-8842451)
chr3 (43-88)||(9624642-9624687)
chr3 (49-98)||(9800047-9800096)
chr3 (43-88)||(11313813-11313858)
chr3 (45-86)||(14832102-14832143)
chr3 (43-88)||(23870572-23870617)
chr3 (42-95)||(25326426-25326479)
chr3 (50-98)||(25775516-25775565)
chr3 (43-84)||(34189428-34189469)
chr3 (42-86)||(3610633-3610677)
chr3 (43-98)||(8593137-8593193)
chr3 (42-82)||(11610521-11610561)
chr3 (43-86)||(14747562-14747606)
chr3 (50-98)||(16789020-16789068)
chr3 (98-130)||(20503554-20503586)
chr3 (43-87)||(25064910-25064954)
chr3 (43-87)||(27277852-27277896)
chr3 (54-94)||(39002044-39002084)
chr3 (43-98)||(40993338-40993394)
chr3 (48-88)||(49505167-49505207)
[»] scaffold0050 (1 HSPs)
scaffold0050 (43-98)||(70279-70334)
[»] chr7 (48 HSPs)
chr7 (43-98)||(24339643-24339698)
chr7 (43-98)||(19992002-19992057)
chr7 (43-86)||(25481903-25481946)
chr7 (46-97)||(26033465-26033516)
chr7 (45-98)||(5409839-5409892)
chr7 (42-98)||(32094023-32094080)
chr7 (43-95)||(11665446-11665498)
chr7 (43-95)||(13770692-13770744)
chr7 (43-98)||(3991325-3991380)
chr7 (43-98)||(7438707-7438762)
chr7 (43-98)||(9778501-9778556)
chr7 (43-98)||(11061079-11061134)
chr7 (48-98)||(21880158-21880208)
chr7 (43-88)||(18233611-18233656)
chr7 (43-96)||(24105679-24105732)
chr7 (49-98)||(27945048-27945097)
chr7 (50-95)||(43250001-43250046)
chr7 (50-98)||(9408337-9408385)
chr7 (46-98)||(18215189-18215241)
chr7 (43-87)||(29787383-29787427)
chr7 (46-98)||(43027472-43027524)
chr7 (48-87)||(2424620-2424659)
chr7 (43-82)||(8234147-8234186)
chr7 (47-98)||(15680814-15680865)
chr7 (49-88)||(18013087-18013126)
chr7 (43-98)||(20549792-20549847)
chr7 (43-98)||(28155571-28155626)
chr7 (43-94)||(35861965-35862016)
chr7 (48-98)||(1401031-1401081)
chr7 (48-98)||(7328694-7328744)
chr7 (43-89)||(8056957-8057002)
chr7 (50-88)||(12278843-12278881)
chr7 (48-86)||(30813818-30813856)
chr7 (43-85)||(32308121-32308163)
chr7 (49-98)||(5835254-5835303)
chr7 (43-84)||(7133295-7133336)
chr7 (50-95)||(10230079-10230124)
chr7 (50-87)||(11890933-11890970)
chr7 (49-86)||(13300417-13300454)
chr7 (50-98)||(18039006-18039055)
chr7 (51-88)||(19930954-19930991)
chr7 (43-88)||(42720903-42720948)
chr7 (50-98)||(6028633-6028681)
chr7 (51-95)||(13427585-13427629)
chr7 (50-98)||(15902830-15902878)
chr7 (48-88)||(17851437-17851477)
chr7 (51-87)||(27980805-27980841)
chr7 (62-98)||(39138464-39138500)
[»] chr6 (72 HSPs)
chr6 (43-98)||(7977833-7977888)
chr6 (43-98)||(16766698-16766753)
chr6 (43-98)||(28715296-28715351)
chr6 (42-98)||(10770677-10770733)
chr6 (43-98)||(5970111-5970166)
chr6 (43-98)||(7938117-7938172)
chr6 (43-98)||(9107373-9107428)
chr6 (43-86)||(12696325-12696368)
chr6 (43-98)||(34595135-34595190)
chr6 (42-98)||(7265596-7265652)
chr6 (44-96)||(31959161-31959213)
chr6 (43-98)||(7801159-7801214)
chr6 (43-98)||(9025497-9025552)
chr6 (43-98)||(16833309-16833364)
chr6 (43-86)||(17841604-17841647)
chr6 (42-88)||(7569181-7569227)
chr6 (51-89)||(16388245-16388283)
chr6 (43-88)||(1532241-1532286)
chr6 (49-98)||(9195757-9195806)
chr6 (49-98)||(9522898-9522947)
chr6 (43-88)||(19040353-19040398)
chr6 (49-86)||(31384927-31384964)
chr6 (43-95)||(1191706-1191758)
chr6 (43-95)||(1681759-1681811)
chr6 (43-98)||(8713980-8714036)
chr6 (43-98)||(9911531-9911587)
chr6 (50-94)||(17341671-17341715)
chr6 (43-87)||(34225823-34225867)
chr6 (43-98)||(426517-426572)
chr6 (43-98)||(853862-853917)
chr6 (43-98)||(3398620-3398674)
chr6 (49-88)||(7151419-7151458)
chr6 (43-98)||(8365522-8365577)
chr6 (43-86)||(8776988-8777031)
chr6 (43-98)||(9658880-9658935)
chr6 (43-98)||(15489735-15489790)
chr6 (47-86)||(17435204-17435243)
chr6 (43-78)||(25010225-25010260)
chr6 (50-97)||(25038075-25038122)
chr6 (47-98)||(28152104-28152154)
chr6 (43-98)||(32511669-32511724)
chr6 (43-98)||(33001292-33001347)
chr6 (43-94)||(33468389-33468440)
chr6 (52-98)||(1700362-1700408)
chr6 (49-95)||(2117083-2117129)
chr6 (48-98)||(7086801-7086851)
chr6 (50-88)||(17168902-17168940)
chr6 (42-88)||(30866157-30866203)
chr6 (50-84)||(34446573-34446607)
chr6 (46-91)||(2224230-2224275)
chr6 (49-98)||(6898284-6898333)
chr6 (53-98)||(7973665-7973710)
chr6 (43-88)||(7996391-7996436)
chr6 (43-88)||(8022365-8022410)
chr6 (43-88)||(8931615-8931660)
chr6 (43-84)||(10842533-10842574)
chr6 (43-88)||(13851737-13851782)
chr6 (51-96)||(26314639-26314684)
chr6 (43-88)||(26562690-26562735)
chr6 (46-98)||(31429006-31429059)
chr6 (50-87)||(31579239-31579276)
chr6 (50-98)||(403867-403915)
chr6 (43-98)||(3209382-3209438)
chr6 (43-98)||(4877943-4877999)
chr6 (50-86)||(6349752-6349788)
chr6 (50-98)||(9617442-9617490)
chr6 (50-98)||(11784219-11784267)
chr6 (50-86)||(18252766-18252802)
chr6 (42-98)||(21395311-21395366)
chr6 (43-98)||(24645481-24645537)
chr6 (43-98)||(32978902-32978958)
chr6 (48-88)||(34073360-34073400)
[»] chr5 (50 HSPs)
chr5 (43-98)||(21191059-21191114)
chr5 (42-97)||(24906305-24906360)
chr5 (43-98)||(41633736-41633791)
chr5 (42-95)||(21576751-21576804)
chr5 (43-98)||(6247623-6247678)
chr5 (43-98)||(7677706-7677761)
chr5 (43-98)||(21522751-21522806)
chr5 (43-98)||(21533317-21533372)
chr5 (43-86)||(39698542-39698585)
chr5 (43-98)||(42893361-42893416)
chr5 (43-96)||(14674270-14674323)
chr5 (49-98)||(40131628-40131677)
chr5 (43-95)||(31084324-31084376)
chr5 (47-98)||(8420032-8420083)
chr5 (43-98)||(13287402-13287457)
chr5 (43-86)||(43001801-43001844)
chr5 (50-84)||(4344750-4344784)
chr5 (43-89)||(22013415-22013461)
chr5 (50-88)||(38749576-38749614)
chr5 (43-88)||(6471902-6471947)
chr5 (50-95)||(25863212-25863257)
chr5 (50-95)||(31264446-31264491)
chr5 (42-98)||(17177026-17177082)
chr5 (43-91)||(27932236-27932284)
chr5 (50-98)||(28588677-28588725)
chr5 (42-98)||(30502391-30502447)
chr5 (42-98)||(30542734-30542790)
chr5 (43-98)||(3966504-3966559)
chr5 (43-98)||(19579702-19579757)
chr5 (43-98)||(21351908-21351963)
chr5 (43-98)||(21542031-21542086)
chr5 (50-97)||(30098334-30098381)
chr5 (43-98)||(36642765-36642820)
chr5 (43-98)||(36838544-36838599)
chr5 (50-88)||(5467991-5468029)
chr5 (47-97)||(7218271-7218321)
chr5 (48-98)||(17593725-17593775)
chr5 (98-128)||(21194063-21194093)
chr5 (52-98)||(43564891-43564937)
chr5 (50-95)||(7997172-7997217)
chr5 (45-89)||(14422907-14422949)
chr5 (49-98)||(22423815-22423864)
chr5 (43-88)||(24273043-24273088)
chr5 (43-88)||(24389126-24389171)
chr5 (43-88)||(41091270-41091315)
chr5 (41-86)||(131760-131807)
chr5 (50-98)||(2548395-2548443)
chr5 (43-98)||(15883988-15884044)
chr5 (98-130)||(22423762-22423794)
chr5 (53-97)||(30136678-30136722)
[»] scaffold0223 (1 HSPs)
scaffold0223 (43-86)||(20173-20216)
[»] scaffold0103 (1 HSPs)
scaffold0103 (43-86)||(51812-51855)
[»] scaffold0066 (1 HSPs)
scaffold0066 (43-86)||(33378-33421)
[»] scaffold0018 (2 HSPs)
scaffold0018 (50-117)||(192233-192300)
scaffold0018 (43-86)||(178833-178877)
[»] scaffold0044 (1 HSPs)
scaffold0044 (51-100)||(53189-53238)
[»] scaffold0021 (1 HSPs)
scaffold0021 (43-99)||(130483-130539)
[»] scaffold0004 (3 HSPs)
scaffold0004 (54-98)||(83172-83216)
scaffold0004 (43-86)||(92808-92851)
scaffold0004 (42-98)||(123625-123684)
[»] scaffold0652 (1 HSPs)
scaffold0652 (43-98)||(465-520)
[»] scaffold0361 (1 HSPs)
scaffold0361 (43-86)||(14531-14574)
[»] scaffold0011 (1 HSPs)
scaffold0011 (43-98)||(17752-17807)
[»] scaffold0003 (1 HSPs)
scaffold0003 (43-98)||(241595-241650)
[»] scaffold1528 (1 HSPs)
scaffold1528 (43-88)||(1036-1081)
[»] scaffold0126 (1 HSPs)
scaffold0126 (50-98)||(19153-19200)
[»] scaffold0049 (1 HSPs)
scaffold0049 (42-98)||(63773-63829)
[»] scaffold0008 (1 HSPs)
scaffold0008 (42-94)||(263379-263431)
[»] scaffold0007 (1 HSPs)
scaffold0007 (43-95)||(225274-225326)
[»] scaffold0722 (1 HSPs)
scaffold0722 (43-86)||(7047-7090)
[»] scaffold0450 (1 HSPs)
scaffold0450 (43-98)||(8638-8693)
[»] scaffold0171 (1 HSPs)
scaffold0171 (43-98)||(23421-23476)
[»] scaffold0053 (1 HSPs)
scaffold0053 (43-98)||(8799-8854)
[»] scaffold0025 (1 HSPs)
scaffold0025 (44-98)||(23771-23826)
[»] scaffold0020 (1 HSPs)
scaffold0020 (43-98)||(135315-135370)
[»] scaffold0227 (1 HSPs)
scaffold0227 (43-89)||(7323-7369)
[»] scaffold0123 (1 HSPs)
scaffold0123 (43-97)||(44529-44583)
[»] scaffold0009 (2 HSPs)
scaffold0009 (60-98)||(174556-174594)
scaffold0009 (60-98)||(180069-180107)
[»] scaffold0598 (1 HSPs)
scaffold0598 (50-83)||(8071-8104)
[»] scaffold0036 (1 HSPs)
scaffold0036 (49-98)||(9750-9799)
[»] scaffold0022 (1 HSPs)
scaffold0022 (50-95)||(90851-90896)
[»] scaffold0793 (2 HSPs)
scaffold0793 (98-130)||(4819-4851)
scaffold0793 (43-86)||(4898-4942)
[»] scaffold0236 (1 HSPs)
scaffold0236 (50-98)||(25771-25819)
[»] scaffold0136 (1 HSPs)
scaffold0136 (50-86)||(3864-3900)


Alignment Details
Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 25192405 - 25192229
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtgcctaatccgaggagtgtccgtgctttatagataagaattaaaca 142  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  25192405 acacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtgcctaatccgaggagtatccgtactttatagataagaattaaaca 25192306  T
Q  143 ttaaaagatatattgatagtgagaaaggagagagtagttaaccatattgacttctccatttctgaatatgagggaac 219  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25192305 ttaaaagatatattgatagtgataaaggagacagtagttaaccatattgacttctccatttctgaatatgagggaac 25192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 25566842 - 25566897
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  25566842 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 25566897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 15816187 - 15816132
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  15816187 acacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtg 15816132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 4948659 - 4948708
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 4948708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 14134706 - 14134755
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcggtg 14134755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 2572114 - 2572059
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  2572114 acacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 2572059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 8342977 - 8343028
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  8342977 agctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 8343028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 22595995 - 22596038
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  22595995 acacagctaataatttaaaaaaataacataattcagtgtaatta 22596038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 22651977 - 22652032
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| |||||||||| | |||||| || ||||||||    
T  22651977 acacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtg 22652032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 29510362 - 29510307
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| ||| |||||||| |||||| || ||||||||    
T  29510362 acacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtg 29510307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 40332168 - 40332247
Alignment:
Q  19 atacggacattggacacgataggaacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||  |||||||| | | |||| || |||||||||| ||||| ||||||||||||||||||| || ||||||||    
T  40332168 atacggacaccggacacgacacggacactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgtcggtg 40332247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 4611535 - 4611580
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  4611535 acaccgctaataatttgagaaaataacataattcagtgtaattata 4611580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 7658470 - 7658519
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| ||||| |||||||||||||||||||||  ||||||||    
T  7658470 ctaataatttgagaaaattacataattcagtgtaattatatttgtcggtg 7658519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 18407720 - 18407777
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtgcc 100  Q
    |||||||||||||||  ||||||| ||||||||||||||||||| || ||||| ||||    
T  18407720 acacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcgctgcc 18407777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 20679447 - 20679398
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtg 20679398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 34897086 - 34897131
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  34897086 acaccgctaataatttgagaaaatcacataattcagtgtaattata 34897131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 44067524 - 44067569
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||||    
T  44067524 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 44067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 3025557 - 3025597
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 11927137 - 11927089
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||| |||||||||||||||||||||  ||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtg 11927089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 18170529 - 18170485
Alignment:
Q  54 aatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||    
T  18170529 aatttgaaaaaattacataattcaatgtaattacaaatgtcggtg 18170485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 18634097 - 18634053
Alignment:
Q  54 aatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||    
T  18634097 aatttgaaaaaattacataattcaatgtaattacaaatgtcggtg 18634053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 18646180 - 18646228
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||| |||||||||||| ||| |||| ||||    
T  18646180 taataatttgaaaaaatgacatgattcagtgtaatcatatatgttggtg 18646228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 20873077 - 20873125
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 20873125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 22197801 - 22197757
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||    
T  22197801 aacacagctaataatttgaaaaattcacataatttagtgtaatta 22197757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 30077442 - 30077402
Alignment:
Q  46 cagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  30077442 cagctaataatttgaaaacatcacataattcagtgtaatta 30077402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 41831998 - 41831958
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaa 83  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  41831998 acacagttaataatttgaaaaaatcacataattcagtgtaa 41831958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 4298944 - 4298889
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||||||||| |||||||| | |||||||| || ||||||||    
T  4298944 acacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtg 4298889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 8343321 - 8343360
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  8343321 agctaataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 13203648 - 13203687
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  13203648 ctaataatttgagaaaattacataattcagtgtaattata 13203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 13437022 - 13436967
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| ||||||||||  ||||| | || ||||||||    
T  13437022 acacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtg 13436967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 13844654 - 13844599
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| |||||||| ||||||||||||  ||||||||    
T  13844654 acactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtg 13844599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 21465389 - 21465456
Alignment:
Q  19 atacggacattggacacgataggaacacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||  |||||||| | | |||||||||||||||||||||||| | |||||||  ||||||||    
T  21465389 atacggacaccggacacgacacggacacagctaataatttgaaaaaatcatataattcgatgtaatta 21465456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 24613522 - 24613576
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |||||| |||||||| |||||||||| || ||||||||    
T  24613522 acacagctaataatttg-aaaaatcacataattaagtgtaattacaagtgtcggtg 24613576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 30271349 - 30271306
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||    
T  30271349 acacagctaatcatttgaaaaaatcacataatgcagtgtaatta 30271306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 31236635 - 31236580
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| |||||||||| ||||||||||  ||||||||    
T  31236635 acactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 36450812 - 36450769
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||    
T  36450812 acacaactaataatttgaaaaaatcacagaattcagtgtaatta 36450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 22493504 - 22493550
Alignment:
Q  52 ataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||| ||||||| ||||||||||||||||| ||| |||||||||    
T  22493504 ataattttaaaaaatcacataattcagtgtaatcatatatgtcggtg 22493550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 34201097 - 34201059
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  34201097 taataatttgagaaaatgacataattcaatgtaattata 34201059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 8017494 - 8017539
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||| |||||||||||||||||| |||||||| ||| ||||||    
T  8017494 taataatatgaaaaaatgacataattgagtgtaatcatagatgtcg 8017539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 14731713 - 14731758
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  14731713 acactgctaataatttgagaaaatcacataatttagtgtaattata 14731758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 24362260 - 24362215
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| | ||| |||||||||||||||||||||    
T  24362260 acaccgctaataatttgagagaatcacataattcagtgtaattata 24362215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 33382079 - 33382022
Alignment:
Q  41 gaacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| | ||||||||| | ||||||||||||||||| |||||||||  ||||||||    
T  33382079 gaacaccgataataatttaagaaaatgacataattcagagtaattatatgtgtcggtg 33382022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 35519866 - 35519833
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataatt 75  Q
    ||||||||||||||||||||||||| ||||||||    
T  35519866 aacacagctaataatttgaaaaaatcacataatt 35519833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 39954337 - 39954292
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  39954337 acaccgctaataatttgagaaaatcacataatttagtgtaattata 39954292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 41838181 - 41838144
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtg 80  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  41838181 acacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 4786389 - 4786341
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||| | ||||| |||||||||||||||||||||  ||||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcggtg 4786341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 6211488 - 6211456
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgta 82  Q
    |||||||||||||||||||||||||||| ||||    
T  6211488 taataatttgaaaaaatgacataattcaatgta 6211456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 7442845 - 7442889
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||| ||||||||||| | ||||| |||||||||||||||||||    
T  7442845 aacaccgctaataatttcataaaattacataattcagtgtaatta 7442889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 11944673 - 11944721
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||| |||||| ||||||||||||||  ||||||||    
T  11944673 taataatttgataaaatcacataactcagtgtaattatatgtgtcggtg 11944721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 12559159 - 12559123
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaat 84  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  12559159 gctaataatttgagaaaatgatataattcagtgtaat 12559123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 12985400 - 12985448
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||| |||||||||| |||||| ||| |||||||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtg 12985448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 24669441 - 24669489
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||  |||| ||||||||||||||||||| || ||||||||    
T  24669441 taataatttgaggaaattacataattcagtgtaattacaagtgtcggtg 24669489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 28745499 - 28745551
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||| ||||||||||||||||| | |||||||||| ||||| || ||||||||    
T  28745499 acactgctaataatttgaaaaattcacataattcaatgtaactacaaatgtcg 28745551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 46683 - 46776
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggt--------gcctaatccgaggagtgtccgtgctttatag 128  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||        |||||||||||||||||||||||||| ||||    
T  46683 acacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgacacgcctaatccgaggagtgtccgtgcttcatag 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 21945504 - 21945559
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  21945504 acacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtg 21945559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 8423776 - 8423721
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  8423776 acaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtg 8423721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 54580081 - 54580026
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  54580081 acacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtg 54580026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 29205444 - 29205500
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  29205444 aacacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 29205500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 30298947 - 30299003
Alignment:
Q  43 acacagctaataatttgaaaa-aatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  30298947 acacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtg 30299003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 30327815 - 30327871
Alignment:
Q  43 acacagctaataatttgaaaa-aatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  30327815 acacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtg 30327871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 2362033 - 2361978
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  2362033 acacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtg 2361978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 23293044 - 23292989
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| |||||||||||| |||||| || ||||||||    
T  23293044 acacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtg 23292989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 11596411 - 11596367
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||| |||||||||||||||||||| |||||||||||||||||||    
T  11596411 aacaaagctaataatttgaaaaaatcacataattcagtgtaatta 11596367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 49431026 - 49431082
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| || ||||||||    
T  49431026 acacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtg 49431082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 3947824 - 3947781
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  3947824 acacagctaataatttgaaaaaatcgcataattcagtgtaatta 3947781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 28964302 - 28964263
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  28964302 agctaataatttgaaaaaatcacataattcagtgtaatta 28964263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 37203265 - 37203308
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||| |||||||||||||||||||||||||||| ||||||||||    
T  37203265 acacggctaataatttgaaaaaatgacataatttagtgtaatta 37203308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 51701259 - 51701302
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||| ||||||||||    
T  51701259 acacagctaataatttgaaaaaattacataattgagtgtaatta 51701302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 12895172 - 12895119
Alignment:
Q  45 acagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||| ||||||||||  ||||||| || ||||||||    
T  12895172 acagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtg 12895119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 15029766 - 15029811
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| |||||||||||||||| || |||||||||||||||||||||    
T  15029766 acactgctaataatttgaaaatatcacataattcagtgtaattata 15029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 32910559 - 32910596
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattat 87  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  32910559 taataatttgagaaaatgacataattcagtgtaattat 32910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 35158037 - 35157988
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| |||||| |||||||| ||||||||||||| ||||||||    
T  35158037 ctaataatttggaaaaatcacataatttagtgtaattataagtgtcggtg 35157988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 6485662 - 6485614
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 6485614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 12895325 - 12895277
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  12895325 taataatttgaaaaaatcacataattttgtgtaattataagtgtcggtg 12895277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 14465134 - 14465090
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||    
T  14465134 aacacacctaataatttgaaaaaatcacataattcaatgtaatta 14465090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 38148783 - 38148731
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||    
T  38148783 acaccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcg 38148731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 47263991 - 47264039
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||||| |||||| ||||||||| ||||||||| ||||||||    
T  47263991 agctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcg 47264039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 32273585 - 32273538
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataa 89  Q
    |||||| |||||||||||||||||| |||||||||||  |||||||||    
T  32273585 aacacaactaataatttgaaaaaataacataattcagaataattataa 32273538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 36635331 - 36635370
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  36635331 ctaataatttgagaaaatcacataattcagtgtaattata 36635370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 38847070 - 38847027
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| | || ||||||||||||||    
T  38847070 acacagctaataatttgaaaaaatcatattattcagtgtaatta 38847027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 903930 - 903968
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattata 903968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 20743329 - 20743295
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaat 84  Q
    ||||||||||| |||||||||||||||||||||||    
T  20743329 taataatttgagaaaatgacataattcagtgtaat 20743295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 22440651 - 22440613
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattata 22440613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 24343515 - 24343553
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  24343515 taataatttgagaaaattacataattcagtgtaattata 24343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 30982931 - 30982881
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| |||||| ||||| ||||| |||||||||||||||| ||||||||    
T  30982931 gctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtg 30982881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 31243599 - 31243565
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaat 84  Q
    ||||||||||| |||||||||||||||||||||||    
T  31243599 taataatttgagaaaatgacataattcagtgtaat 31243565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 40179687 - 40179649
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  40179687 taatagtttgaaaaaatcacataattcagtgtaattata 40179649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 50848354 - 50848320
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaat 84  Q
    ||||||||||||||||||| |||||||||||||||    
T  50848354 taataatttgaaaaaatgatataattcagtgtaat 50848320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 4383375 - 4383419
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtc 94  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||    
T  4383375 ctaataatttgaaaaa-tcacataattcagtgtaattacaaatgtc 4383419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 11651192 - 11651155
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtg 80  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  11651192 acacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 12797389 - 12797341
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||| | ||||||||||||||||||| || ||||||||    
T  12797389 ctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtg 12797341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 16189709 - 16189754
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    ||||| ||||| ||||||| ||||| ||||||||||||||||||||    
T  16189709 aacaccgctaaaaatttgagaaaatcacataattcagtgtaattat 16189754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 40613451 - 40613496
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||| ||||| ||||| |||||||||||||||||||||    
T  40613451 acaccgctaatattttgagaaaatcacataattcagtgtaattata 40613496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 715575 - 715543
Alignment:
Q  98 gcctaatccgaggagtgtccgtgctttatagat 130  Q
    |||||||||||||||||||||||||| ||||||    
T  715575 gcctaatccgaggagtgtccgtgcttcatagat 715543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 715666 - 715622
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaatta 86  Q
    |||||||||||||||| |||||| | |||||||||||||||||||    
T  715666 acacagctaataatttaaaaaaaatcacataattcagtgtaatta 715622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 752901 - 752869
Alignment:
Q  98 gcctaatccgaggagtgtccgtgctttatagat 130  Q
    |||||||||||||||||||||||||| ||||||    
T  752901 gcctaatccgaggagtgtccgtgcttcatagat 752869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 752992 - 752948
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaatta 86  Q
    |||||||||||||||| |||||| | |||||||||||||||||||    
T  752992 acacagctaataatttaaaaaaaatcacataattcagtgtaatta 752948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 5775409 - 5775361
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||| |||||||| ||||||||||||  ||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcggtg 5775361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 14126162 - 14126118
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtc 94  Q
    ||||||||||| ||| | |||||||||||||||||||||| ||||    
T  14126162 taataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 16303317 - 16303269
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||| |||||| |||||||||| || ||||||||    
T  16303317 taatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtg 16303269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 19312310 - 19312391
Alignment:
Q  21 acggacattggacacgataggaacacagctaataattt----gaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |   ||||||||||||||||     ||||||| |||| ||||||||||||||||| | ||||||    
T  19312310 acggacattggacacgacaccgacacagctaataatttaaaaaaaaaaatcacatgattcagtgtaattataagtatcggtg 19312391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 24999045 - 24999089
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    |||||| | ||||||||||||||| ||| ||||||||||||||||    
T  24999045 acacagttgataatttgaaaaaatcacacaattcagtgtaattat 24999089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 28158014 - 28158054
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||||||||||||||||| ||| | ||||||||||    
T  28158014 gctaataatttgaaaaaatgacatgatttaatgtaattata 28158054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 28470453 - 28470485
Alignment:
Q  97 tgcctaatccgaggagtgtccgtgctttataga 129  Q
    ||||||||||||||||||||||||||| |||||    
T  28470453 tgcctaatccgaggagtgtccgtgcttcataga 28470485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 36386262 - 36386226
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  36386262 taataatttgagaaaaggacataattcagtgtaatta 36386226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 42640527 - 42640585
Alignment:
Q  43 acacagctaataatttgaaaaaa---tgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||| ||||||||||||||   | ||||||||||||||||||| || ||||||||    
T  42640527 acacagctgataatttgaaaaaaaaatcacataattcagtgtaattacaagtgtcggtg 42640585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 56257934 - 56257978
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    |||| ||||||||||||| ||||| | ||||||||||||||||||    
T  56257934 acactgctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 1486767 - 1486712
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  1486767 acacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtg 1486712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 113300 - 113343
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  113300 acacagctaataatttgaaaaaatcacataattcagtgtaatta 113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 21378579 - 21378634
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||    
T  21378579 acacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtg 21378634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 22515945 - 22515890
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  22515945 acacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 22515890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 24577244 - 24577189
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  24577244 acacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 24577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 38078719 - 38078664
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| |||||||||| |||||||| || ||||||||    
T  38078719 acacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtg 38078664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 48450646 - 48450592
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcgg 96  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| || ||||||    
T  48450646 aacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 398823 - 398778
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  398823 acaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 5944283 - 5944339
Alignment:
Q  44 cacagctaataatttgaaaaaa--tgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||| ||||||||    
T  5944283 cacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtg 5944339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 6612227 - 6612174
Alignment:
Q  45 acagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  6612227 acagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtg 6612174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 31015044 - 31015097
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcgg 96  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| || ||||||    
T  31015044 acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 18190166 - 18190114
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| || |||||    
T  18190166 acacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcg 18190114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 40258984 - 40258936
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 40258936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 1705050 - 1704995
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  1705050 acacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtg 1704995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 1864938 - 1864883
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||  ||||||||    
T  1864938 acacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtg 1864883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 16927239 - 16927188
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||| ||||    
T  16927239 agctaataatttgaaaaaatcatataattcagtgtaattatatatgttggtg 16927188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 18337338 - 18337385
Alignment:
Q  51 aataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 18337385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 19058914 - 19058859
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||| |||| || ||||||||||||||||||| || ||||||||    
T  19058914 acacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtg 19058859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 22881674 - 22881619
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  22881674 acacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 22881619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 23738679 - 23738722
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  23738679 acacagctaataatttgaaaaaatcacataattcagtgcaatta 23738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 31672953 - 31672910
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  31672953 acacagctaataatttgaaaaaatcacttaattcagtgtaatta 31672910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 36878462 - 36878517
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||  ||||||||    
T  36878462 acaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtg 36878517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 37598833 - 37598887
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  37598833 acacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtg 37598887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 42359507 - 42359452
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||| || ||||||||    
T  42359507 acacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtg 42359452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 46348441 - 46348386
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| | |||||| |||||||||| || ||||||||    
T  46348441 acacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtg 46348386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 12443518 - 12443476
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatt 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  12443518 acacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 22794129 - 22794091
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  22794129 taataatttgaaaaaatgacataatacagtgtaattata 22794091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 5898324 - 5898279
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||    
T  5898324 acaccgctaataatctgaaaaaatcacataattcagtgtaattata 5898279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 17754312 - 17754357
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||    
T  17754312 acaccgctaataatttgaaaaaattacataattcagtgtaactata 17754357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 23531831 - 23531786
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgt 93  Q
    |||||||||||||||| || |||||||||| |||||||||||||||    
T  23531831 gctaataatttgaaaatatcacataattcaatgtaattataaatgt 23531786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 30847778 - 30847737
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaat 84  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  30847778 acactgctaataatttgaaaaaatgacataattcaatgtaat 30847737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 40181872 - 40181917
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  40181872 acactgctaataatttgagaaaatcacataattcagtgtaattata 40181917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 8010341 - 8010293
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||||||||||||||||||| | |||||||||| ||||||||| |||||    
T  8010341 agctaataatttgaaaaaattatataattcagtataattataagtgtcg 8010293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 47989505 - 47989553
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||| ||||||| ||||||||||||||||||| || ||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtg 47989553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 51410025 - 51410081
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||| || ||||||||    
T  51410025 acacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtg 51410081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 2896179 - 2896124
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| |||||||||||||||  |||| |||||||||    
T  2896179 acaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtg 2896124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 5376558 - 5376503
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||| | ||||| ||||||||||||||||||| || ||||||||    
T  5376558 acaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtg 5376503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 7918263 - 7918224
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattata 7918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 9629958 - 9629903
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| | |||||||||||| ||||||| ||||||||    
T  9629958 acaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtg 9629903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 25272483 - 25272538
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||| ||||||| ||||| |||||||| ||||||||||||| ||||||||    
T  25272483 acacagttaacaatttgagaaaatcacataatttagtgtaattataagtgtcggtg 25272538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 28273146 - 28273091
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||| |||||||||||| | ||||||||||||||||| || ||||||||    
T  28273146 acacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtg 28273091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 34298443 - 34298482
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  34298443 ctaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 41877528 - 41877473
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| |||||||| |||||||||| || ||||||||    
T  41877528 acaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtg 41877473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 6427350 - 6427396
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||| ||||||||||||| ||||| |||||||||| ||||||||||    
T  6427350 aacaccgctaataatttgagaaaatcacataattcaatgtaattata 6427396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 7353546 - 7353496
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||| |||||||| |||||||| |||||||||||| |||||||||    
T  7353546 gctattaattcgaaaaaattacataatttagtgtaattatatatgtcggtg 7353496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 21366077 - 21366039
Alignment:
Q  44 cacagctaataatttgaaaaaatgacataattcagtgta 82  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  21366077 cacagctaataattttaaaaaataacataattcagtgta 21366039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 40747824 - 40747786
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  40747824 taataatttgagaaaatgacataattcaatgtaattata 40747786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 44482240 - 44482286
Alignment:
Q  52 ataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||| ||||| |||||||||||||||||||||  ||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtg 44482286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 9828051 - 9828100
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| ||||| |||||||||||||||||| ||  ||||||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaattttatgtgtcggtg 9828100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 15323166 - 15323215
Alignment:
Q  45 acagctaataatttgaaaaaatgacataattcagtgtaattataaatgtc 94  Q
    |||| ||||||||||||||||| |||||||| ||||||||| ||| ||||    
T  15323166 acagttaataatttgaaaaaatcacataatttagtgtaattgtaagtgtc 15323215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 17778550 - 17778602
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| |||||   ||||||||||| || ||||||||    
T  17778550 acacagctaataatttgaaaaaatcacata---cagtgtaattacaagtgtcggtg 17778602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 18471299 - 18471355
Alignment:
Q  43 acacagctaataatttg--aaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    |||||||||||||||||  ||||||| |||||||||||| |||||| || |||||||    
T  18471299 acacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggt 18471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 19324563 - 19324608
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||| ||||||||| ||||| |||||||||||||||||||||    
T  19324563 acactgctgataatttgagaaaatcacataattcagtgtaattata 19324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 25098613 - 25098568
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||| ||||||||| ||||| |||||||||||||||||||||    
T  25098613 acaccgctgataatttgagaaaatcacataattcagtgtaattata 25098568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 25452207 - 25452162
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    ||||| ||||||||||||| |||||  |||||||||||||||||||    
T  25452207 aacactgctaataatttgagaaaatctcataattcagtgtaattat 25452162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 26238170 - 26238129
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaat 84  Q
    |||| ||||||||||||| ||||| |||||||||||||||||    
T  26238170 acaccgctaataatttgagaaaataacataattcagtgtaat 26238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 34741829 - 34741874
Alignment:
Q  45 acagctaataatttgaaaa-aatgacataattcagtgtaattataa 89  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||    
T  34741829 acagctaataatttaaaaaaaatgacataattaagtgtaattataa 34741874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 35702572 - 35702535
Alignment:
Q  98 gcctaatccgaggagtgtccgtgctttatagataagaa 135  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  35702572 gcctaatccgaggagtgtccgtgcttcatagttaagaa 35702535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 42325568 - 42325601
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaa 83  Q
    ||||||||||| ||||||||||||||||||||||    
T  42325568 taataatttgagaaaatgacataattcagtgtaa 42325601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 46914084 - 46914043
Alignment:
Q  56 tttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    ||||| ||||| |||||||||| |||||||||||||||||||    
T  46914084 tttgagaaaataacataattcaatgtaattataaatgtcggt 46914043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 1815265 - 1815313
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| |||| ||||||| ||||||||||||||||||| || ||||||||    
T  1815265 taattattttaaaaaatcacataattcagtgtaattacaagtgtcggtg 1815313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 5898234 - 5898206
Alignment:
Q  100 ctaatccgaggagtgtccgtgctttatag 128  Q
    |||||||||||||||||||||||||||||    
T  5898234 ctaatccgaggagtgtccgtgctttatag 5898206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 13011274 - 13011230
Alignment:
Q  43 acacagctaataatttgaa-aaaatgacataattcagtgtaatta 86  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||    
T  13011274 acacagctaataatttgaaaaaaatcacataattaagtgtaatta 13011230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 13997891 - 13997939
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| |||| ||||||| |||||||||||||||||||||  ||||||||    
T  13997891 taattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtg 13997939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 23621972 - 23622012
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaa 83  Q
    |||||||||||||||||||||||| | ||| ||||||||||    
T  23621972 acacagctaataatttgaaaaaattatatacttcagtgtaa 23622012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 23653004 - 23653040
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaa 83  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  23653004 agctaataatttgaaaaaatcacatacttcagtgtaa 23653040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 24462735 - 24462679
Alignment:
Q  43 acacagctaataatttga-aaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||  |||||| | |||||||||||||||||||  ||||||||    
T  24462735 acacagctaataatttgcgaaaaattatataattcagtgtaattatatctgtcggtg 24462679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 25361896 - 25361932
Alignment:
Q  52 ataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattata 25361932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 28674808 - 28674856
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||| |||||||||||| |||||||| |||| ||||    
T  28674808 taataatttgagaaaattacataattcagtataattatatatgttggtg 28674856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 34712436 - 34712396
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||||| ||||| |||||||| ||||||||||||    
T  34712436 gctaataatttgagaaaataacataatttagtgtaattata 34712396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 41017455 - 41017407
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| |||||||||||||| | |||||||||| |||| ||||    
T  41017455 taataatttgagaaaatgacataatttaatgtaattatatatgttggtg 41017407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 48148096 - 48148040
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||| |||||| | | ||||||||||||||||||| |||||||||    
T  48148096 acaccgctaataattttaaaaaaatcatataattcagtgtaattatatatgtcggtg 48148040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 12668475 - 12668426
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtg 12668426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 30335418 - 30335473
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  30335418 acacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtg 30335473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 21374757 - 21374673
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtgcctaatccgaggagtgtccgtgctttatag 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||   ||||||||||| ||||||  |||||| ||||    
T  21374757 acacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc-acgcctaatccgaagagtgtatgtgcttcatag 21374673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 2438777 - 2438722
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| || ||||||||    
T  2438777 acacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtg 2438722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 11223921 - 11223866
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||    
T  11223921 acacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtg 11223866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 36756402 - 36756347
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  36756402 acacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtg 36756347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 15657871 - 15657920
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  15657871 ctaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtg 15657920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 28677910 - 28677955
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  28677910 acaccgctaataatttgaaaaaatcacataattcagtgtaattata 28677955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 12940993 - 12940941
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||| |||||||||||||||||| | ||||||||||||||||| ||||||||    
T  12940993 acacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 30717584 - 30717536
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||||||||||||||||||| ||||||||||||||||||| || |||||    
T  30717584 agctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30717536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 18841071 - 18841016
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  18841071 acacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtg 18841016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 20539732 - 20539677
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| | |||||| |||||||||| || ||||||||    
T  20539732 acacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtg 20539677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 37558978 - 37559033
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |||||| |||||||||| |||||||| || ||||||||    
T  37558978 acacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtg 37559033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 42832334 - 42832279
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  42832334 acaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtg 42832279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 30404901 - 30404855
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcgg 96  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||||    
T  30404901 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 30404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 10535810 - 10535765
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||| ||||||||||||||||||||||| |||| |||||    
T  10535810 taataatttgagaaaatgacataattcagtgtaatcataagtgtcg 10535765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 21616763 - 21616808
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  21616763 acaccgctaataatttgagaaaatcacataattcagtgtaattata 21616808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 23921261 - 23921302
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaat 91  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaattataaat 23921302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 11308053 - 11308021
Alignment:
Q  52 ataatttgaaaaaatgacataattcagtgtaat 84  Q
    |||||||||||||||||||||||||||||||||    
T  11308053 ataatttgaaaaaatgacataattcagtgtaat 11308021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 15972881 - 15972929
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| ||| ||||||||||||||| || ||||||||    
T  15972881 taataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtg 15972929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 18420493 - 18420437
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||| ||||| |||||||||| || |||||||| ||||||||    
T  18420493 aacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtg 18420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 19536456 - 19536400
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||| || ||||||||    
T  19536456 acacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtg 19536400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 21782876 - 21782832
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||    
T  21782876 acactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 974748 - 974803
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||||| || |||| |||||||||||||| || ||||||||    
T  974748 acacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtg 974803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 4882749 - 4882702
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||||| |||||||||||||| ||||||||||||||||| || |||||    
T  4882749 gctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcg 4882702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 23718027 - 23718082
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||| | |||||||||||||||||||||  ||||||||    
T  23718027 acaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 24105699 - 24105754
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||| | |||||||||||||||||||||  ||||||||    
T  24105699 acaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 24894390 - 24894433
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||    
T  24894390 acacagctaataatttaaaaaaatcacataattcagtgcaatta 24894433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 27460027 - 27460070
Alignment:
Q  43 acacagctaataatttg-aaaaaatgacataattcagtgtaatt 85  Q
    ||||||||||||||||| |||||||||||||||||||| |||||    
T  27460027 acacagctaataatttgaaaaaaatgacataattcagtataatt 27460070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 29176551 - 29176496
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||||||  | |||||||||||||||||||||| ||| ||||    
T  29176551 acacagttaataatttgaaaaggtcacataattcagtgtaattataagtgttggtg 29176496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 38117217 - 38117174
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||    
T  38117217 acacagctaataatttgaaaaaatcacatacttcggtgtaatta 38117174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 39323265 - 39323308
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||    
T  39323265 acaccgctaataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 44860321 - 44860376
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| |||||  ||||||||||||||||||||  ||||||||    
T  44860321 acaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtg 44860376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 6940256 - 6940310
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    |||||||||||||||| ||||| | |||||||| |||||||||| || |||||||    
T  6940256 acacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggt 6940310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 34691858 - 34691808
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| ||||| | |||||||||||||||||||  ||||||||    
T  34691858 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtg 34691808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 34714270 - 34714220
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| ||||| | |||||||||||||||||||  ||||||||    
T  34714270 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtg 34714220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 40361805 - 40361767
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  40361805 taataatttgaaaaaattacataatttagtgtaattata 40361767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 5367199 - 5367248
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||  |||| |||||||||||||||||||||  ||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtg 5367248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 28341909 - 28341872
Alignment:
Q  61 aaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  28341909 aaaaatgacataattcaatgtaattatagatgtcggtg 28341872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 28412358 - 28412395
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  28412358 taataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 31808078 - 31808123
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||| | ||||| |||||||||||||||||||||    
T  31808078 acaccgctaataatttaacaaaatcacataattcagtgtaattata 31808123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 37411302 - 37411257
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||||||||| ||||||    
T  37411302 acaccgctaataatttgagaaaatcacataattcagtgtgattata 37411257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 1886937 - 1886893
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||||| ||||||||||||||| | |||||||||| ||||||||    
T  1886937 aacacagttaataatttgaaaaatttacataattcaatgtaatta 1886893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 5040735 - 5040790
Alignment:
Q  45 acagctaataatttg--aaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||  ||||||| |||||||||| |||||||| || ||||||||    
T  5040735 acagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtg 5040790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 14996282 - 14996226
Alignment:
Q  43 acacagctaataatttgaa-aaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||| ||||| | |||||| |||||||||| || ||||||||    
T  14996282 acacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtg 14996226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 18276522 - 18276566
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    |||| ||||||||||||| ||||| || |||||||||||||||||    
T  18276522 acaccgctaataatttgagaaaatcacttaattcagtgtaattat 18276566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 18421971 - 18422019
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||| |||| || ||||||||||||||||||| || ||||||||    
T  18421971 taataatttaaaaatatcacataattcagtgtaattacaagtgtcggtg 18422019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 21624267 - 21624323
Alignment:
Q  43 acacagctaataatttgaaaaaatga-cataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||| ||||||  | |||||||||||||||||| || ||||||||    
T  21624267 acacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtg 21624323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 26769611 - 26769643
Alignment:
Q  98 gcctaatccgaggagtgtccgtgctttatagat 130  Q
    |||||||||||||||||||||||||| ||||||    
T  26769611 gcctaatccgaggagtgtccgtgcttcatagat 26769643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 31026703 - 31026751
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||| | |||||||||||||||| |||||| ||| |||||||||    
T  31026703 taataatttaagaaaatgacataattcaatgtaatcatatatgtcggtg 31026751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 34007042 - 34006994
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||| ||||||||||||||||||| |||  ||||||||    
T  34007042 taataatttgagaaattgacataattcagtgtaatcataggtgtcggtg 34006994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 36409685 - 36409641
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    |||| ||| ||||||||||||||| |||||||| |||||||||||    
T  36409685 acaccgctgataatttgaaaaaatcacataatttagtgtaattat 36409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 39026822 - 39026874
Alignment:
Q  46 cagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||| |||| ||||| ||||| || | ||||||||||||||||||||    
T  39026822 cagctaataacttgagaaaatcacatattttaatgtaattataaatgtcggtg 39026874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 26508111 - 26508167
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtgc 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  26508111 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgc 26508167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 1509540 - 1509595
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  1509540 acacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 1509595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 4987349 - 4987306
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  4987349 acacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 7928451 - 7928506
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||  ||||||||    
T  7928451 acaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtg 7928506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 20503474 - 20503521
Alignment:
Q  51 aataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||    
T  20503474 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtg 20503521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 28918006 - 28918057
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  28918006 agctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 28918057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 51206411 - 51206356
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| |||||||||||||||| || || ||||||||    
T  51206411 acacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtg 51206356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 14979182 - 14979224
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatt 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  14979182 acacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 21257044 - 21256990
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    |||||||||||||||||||||||| |||||||||||| |||||| || |||||||    
T  21257044 acacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggt 21256990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 25948940 - 25948890
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  25948940 gctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtg 25948890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 3164083 - 3164043
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaa 83  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  3164083 acacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 8383258 - 8383313
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| | |||||||||||||||||||| ||||||||    
T  8383258 acaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtg 8383313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 10954953 - 10955008
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| ||||||||||||||||| | || ||||||||    
T  10954953 acacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtg 10955008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 15796352 - 15796297
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||||||||| | ||||||||||||||||| || ||||||||    
T  15796352 acacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtg 15796297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 21479119 - 21479162
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  21479119 acacagctaataatttgaaaaaatcacacaattcagtgtaatta 21479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 34910318 - 34910361
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  34910318 acacaactaataatttgaaaaaatcacataattcagtgtaatta 34910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 49651844 - 49651789
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||||||||| |||||||||| |||||||| || ||||||||    
T  49651844 acacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtg 49651789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 55401076 - 55401131
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  55401076 acacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 55401131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 17005671 - 17005622
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| ||||| | |||||||||||||||||||| ||||||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgtcggtg 17005622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 18426956 - 18427005
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||| ||||||| ||||||||| ||||||||||| |||||||||    
T  18426956 ctaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtg 18427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 24205092 - 24205047
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||||    
T  24205092 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 4201404 - 4201452
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |||||||| |||||||||||| |||| ||||    
T  4201404 taataatttgaaaaaatcacataattaagtgtaattatatatgttggtg 4201452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 8039894 - 8039838
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||| ||||| | |||||||||||||||||||  ||||||||    
T  8039894 aacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtg 8039838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 16789708 - 16789668
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaa 83  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  16789708 acacagataataatttgagaaaatgacataattcagtgtaa 16789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 20691327 - 20691375
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||||||||||||||||||||| |||  ||||||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtg 20691375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 34307838 - 34307786
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  34307838 acaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 35994795 - 35994744
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||||||||||||||||||||| | ||||||||||||||||||| || |||||    
T  35994795 acacagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcg 35994744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 7614473 - 7614418
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||| | ||||| |||||||||||| |||||||| |||||||||    
T  7614473 acacagttaataatttaagaaaatcacataattcagtataattatatatgtcggtg 7614418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 8587079 - 8587024
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||| |||||||||||||| |||||||| |||||||||| || ||||||||    
T  8587079 acacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtg 8587024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 10268544 - 10268501
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||    
T  10268544 acacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 11251984 - 11252023
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  11251984 gctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 14209114 - 14209157
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||    
T  14209114 acacaactaataattttaaaaaatcacataattcagtgtaatta 14209157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 16000074 - 16000019
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||| ||||||| |||||||||||||||| || || ||||||||    
T  16000074 acacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtg 16000019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 27505247 - 27505302
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||  |||||| |||||||| |||||||||| || ||||||||    
T  27505247 acacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtg 27505302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 28812516 - 28812571
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||| |||| ||||||||||||||| ||| || ||||||||    
T  28812516 acacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtg 28812571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 29508451 - 29508490
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattata 29508490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 34185181 - 34185126
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||| ||||||| ||| ||||||||||||||| || ||||||||    
T  34185181 acacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtg 34185126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 85
Target Start/End: Complemental strand, 41319361 - 41319326
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaatt 85  Q
    |||||||||||||||||||||||||||| |||||||    
T  41319361 taataatttgaaaaaatgacataattcaatgtaatt 41319326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 1550140 - 1550186
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||| ||||||||||||||||||| |||  ||||||||||||||||    
T  1550140 aacaccgctaataatttgaaaaaatcacactattcagtgtaattata 1550186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 10690320 - 10690266
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    |||| ||||||||| ||| ||||| |||||||||||||||||||||  |||||||    
T  10690320 acaccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcggt 10690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 12704708 - 12704674
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaat 84  Q
    |||||||||||||||||||||||||||| ||||||    
T  12704708 taataatttgaaaaaatgacataattcaatgtaat 12704674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 14338528 - 14338486
Alignment:
Q  56 tttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||| |||||| | |||||||||||    
T  14338528 tttgaaaaaatgacataattcaatgtaatcacaaatgtcggtg 14338486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 16192801 - 16192763
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattata 16192763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 21149075 - 21149109
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaat 84  Q
    ||||||||||| |||||||||||||||||||||||    
T  21149075 taataatttgagaaaatgacataattcagtgtaat 21149109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 21861570 - 21861616
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataa 89  Q
    |||||| ||| |||||| |||||||||||||||||||||||| ||||    
T  21861570 acacagataacaatttggaaaaatgacataattcagtgtaatcataa 21861616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 32429433 - 32429383
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| | ||||| ||||||||||||| |||||||||| ||||||    
T  32429433 gctaataatttaagaaaatcacataattcagtgcaattataaatatcggtg 32429383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 38731224 - 38731274
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||||| ||||||||||||||| |||||  ||||||||    
T  38731224 gctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtg 38731274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 40052333 - 40052367
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattca 77  Q
    |||||||||||||||||||||||| ||||||||||    
T  40052333 acacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 4991025 - 4990972
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcgg 96  Q
    |||| ||||||| ||||| ||||| ||||||||||||||||||| || ||||||    
T  4991025 acaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcgg 4990972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 8842418 - 8842451
Alignment:
Q  98 gcctaatccgaggagtgtccgtgctttatagata 131  Q
    |||||||||||||||||||||||||| |||||||    
T  8842418 gcctaatccgaggagtgtccgtgcttcatagata 8842451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 9624642 - 9624687
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||||| ||||||||||    
T  9624642 acactgctaataatttgagaaaatcacataattcaatgtaattata 9624687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 9800047 - 9800096
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| ||||| ||||||||| |||||||| ||| ||||||||    
T  9800047 ctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtg 9800096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 11313858 - 11313813
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  11313858 acactgctaataatttgagaaaatcacataatttagtgtaattata 11313813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 14832102 - 14832143
Alignment:
Q  45 acagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||| |||||| ||| ||||||||    
T  14832102 acagctaataatttgaaaaaatcacataactcaatgtaatta 14832143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 23870617 - 23870572
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||||||||| | |||||||||||| ||||||    
T  23870617 acaccgctaataatttgaaaaaatcatataattcagtgtgattata 23870572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 25326426 - 25326479
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||| ||||||||| ||||||| | |||||| |||||||||||| ||||||    
T  25326426 aacacagataataatttaaaaaaataatataatttagtgtaattatagatgtcg 25326479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 25775516 - 25775565
Alignment:
Q  50 taataatttgaaaa-aatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||| ||| ||||||||||||||||||| || ||||||||    
T  25775516 taataatttgaaaataatcacataattcagtgtaattacaagtgtcggtg 25775565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 34189428 - 34189469
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaat 84  Q
    |||||| ||||||||||| ||||||||||| |||||||||||    
T  34189428 acacagataataatttgagaaaatgacatatttcagtgtaat 34189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 3610633 - 3610677
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  3610633 aacacagttaataatttaaaaaaataacataactcagtgtaatta 3610677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 8593137 - 8593193
Alignment:
Q  43 acacagctaataatttg-aaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||| ||||||| ||||||| |||||||||||| |||||| || ||||||||    
T  8593137 acacagctactaatttggaaaaaatcacataattcagtataattacaagtgtcggtg 8593193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 11610521 - 11610561
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgta 82  Q
    ||||| ||||||||||| ||||||| |||||||||||||||    
T  11610521 aacaccgctaataatttaaaaaaatcacataattcagtgta 11610561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 14747562 - 14747606
Alignment:
Q  43 acacagctaataatttg-aaaaaatgacataattcagtgtaatta 86  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||    
T  14747562 acacagctaataatttgaaaaaaatcacataatttagtgtaatta 14747606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 16789020 - 16789068
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||| ||||||| | |||||||||||||||||||| ||| ||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtg 16789068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 20503554 - 20503586
Alignment:
Q  98 gcctaatccgaggagtgtccgtgctttatagat 130  Q
    |||||||||||||||||||||||||| ||||||    
T  20503554 gcctaatccgaggagtgtccgtgcttcatagat 20503586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 25064910 - 25064954
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    |||| |||||| |||||||||||| |||||||| |||||||||||    
T  25064910 acaccgctaatgatttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 27277896 - 27277852
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    |||| ||||||||||||| ||||| |||||||| |||||||||||    
T  27277896 acactgctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 39002044 - 39002084
Alignment:
Q  54 aatttgaaaaaatgacataattcagtgtaattataaatgtc 94  Q
    ||||||||||||| |||||||||| |||||||||| |||||    
T  39002044 aatttgaaaaaatcacataattcaatgtaattatatatgtc 39002084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 40993394 - 40993338
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||| |||||| | |||||||||||||||||||||  ||||||||    
T  40993394 acaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtg 40993338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 49505207 - 49505167
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||||| ||||| |||||||| ||||||||||||    
T  49505207 gctaataatttgagaaaatcacataatttagtgtaattata 49505167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 70279 - 70334
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  70279 acacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtg 70334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 24339643 - 24339698
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  24339643 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 24339698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 19992002 - 19992057
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  19992002 acacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtg 19992057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 25481903 - 25481946
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  25481903 acacagctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 26033516 - 26033465
Alignment:
Q  46 cagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    ||||||||||||||||||||| ||||||||||||||||||| || |||||||    
T  26033516 cagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 26033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 5409892 - 5409839
Alignment:
Q  45 acagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||| ||||||||||||| ||||| || ||||||||    
T  5409892 acagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtg 5409839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 32094080 - 32094023
Alignment:
Q  42 aacacagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  32094080 aacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtg 32094023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 11665498 - 11665446
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||| |||||    
T  11665498 acacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcg 11665446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 13770692 - 13770744
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| || |||||    
T  13770692 acacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcg 13770744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 3991325 - 3991380
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| |||||||||||| |||||| || ||||||||    
T  3991325 acacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtg 3991380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 7438707 - 7438762
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||||||||| |||||||||| |||||||| || ||||||||    
T  7438707 acacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtg 7438762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 9778501 - 9778556
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||| ||||||||||||||| |||||||||||| |||||| || ||||||||    
T  9778501 acacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtg 9778556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 11061134 - 11061079
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| |||||||| ||| |||||| || ||||||||    
T  11061134 acacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtg 11061079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 21880158 - 21880208
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| ||||| ||||||||||||||||||| || ||||||||    
T  21880158 gctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtg 21880208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 18233656 - 18233611
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||| || |||||||| |||||||||||||||||||||||||||    
T  18233656 acacagatagtaatttgagaaaatgacataattcagtgtaattata 18233611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 24105679 - 24105732
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcgg 96  Q
    ||||||||||||||||||||||||  ||| |||||||||||||| || ||||||    
T  24105679 acacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcgg 24105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 27945048 - 27945097
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| ||||| ||||||||||||||||||| || ||||||||    
T  27945048 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtg 27945097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 43250001 - 43250046
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||||    
T  43250001 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 43250046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 9408385 - 9408337
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 9408337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 18215241 - 18215189
Alignment:
Q  46 cagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||||| ||||||| ||||||| ||| || ||||||||    
T  18215241 cagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtg 18215189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 29787427 - 29787383
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||    
T  29787427 acaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 43027524 - 43027472
Alignment:
Q  46 cagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||||| ||||||| |||||||| || || ||||||||    
T  43027524 cagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtg 43027472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 2424620 - 2424659
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  2424620 gctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 8234147 - 8234186
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgta 82  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  8234147 acacaactaataatttgaaaaaataacataattcagtgta 8234186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 15680814 - 15680865
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||  ||||||| |||||||| ||||||||||||| ||||||||    
T  15680814 agctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtg 15680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 18013126 - 18013087
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  18013126 ctaataatttaaaaaaattacataattcagtgtaattata 18013087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 20549792 - 20549847
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| || ||||||||||||||||||  ||||||||    
T  20549792 acaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtg 20549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 28155571 - 28155626
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| ||||||||| ||||||||| || ||||||||    
T  28155571 acaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtg 28155626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 35861965 - 35862016
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtc 94  Q
    ||||| |||||||||||||||||| |||||||||| ||||||| ||| ||||    
T  35861965 acacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtc 35862016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 1401031 - 1401081
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| ||| | |||||||||||||||||||||| | ||||||    
T  1401031 gctaataatttgagaaactcacataattcagtgtaattataagtatcggtg 1401081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 7328744 - 7328694
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| ||||| |||||||| ||||||||||||  ||||||||    
T  7328744 gctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtg 7328694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 8057002 - 8056957
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataa 89  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  8057002 acacagttaataattt-aaaaaattacataattcagtgtaattataa 8056957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 12278843 - 12278881
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattata 12278881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 30813818 - 30813856
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  30813818 gctaataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 32308121 - 32308163
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatt 85  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||    
T  32308121 acaccgctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 5835254 - 5835303
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||| ||||| |||||||||||||||||||||  ||||||||    
T  5835254 ctaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtg 5835303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 7133336 - 7133295
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaat 84  Q
    |||||| | ||||||||| |||||||||||||||||||||||    
T  7133336 acacagatgataatttgagaaaatgacataattcagtgtaat 7133295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 10230124 - 10230079
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||||||||||  ||||||||||||||||||||| |||| ||||||    
T  10230124 taataatttgaggaaatgacataattcagtgtaagtatagatgtcg 10230079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 11890970 - 11890933
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattat 87  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattat 11890933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 13300417 - 13300454
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||| | |||||||||||||||||    
T  13300417 ctaataatttgaaaaaatcatataattcagtgtaatta 13300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 18039006 - 18039055
Alignment:
Q  50 taataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||| | ||||||||||||||||||| || ||||||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtg 18039055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 19930991 - 19930954
Alignment:
Q  51 aataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  19930991 aataatttgataaaatgacataattcaatgtaattata 19930954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 42720948 - 42720903
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||||||||| |||||||| | ||||||||||    
T  42720948 acaccgctaataatttgaaaaaatcacataattaaatgtaattata 42720903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 6028633 - 6028681
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||| || |||||||| | |||||||| |||||||||||    
T  6028633 taataatttgaaaatataacataatttaatgtaattacaaatgtcggtg 6028681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 13427585 - 13427629
Alignment:
Q  51 aataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||||||||||||||||| ||| |||| ||| ||||||    
T  13427585 aataatttgaaaaaatgacataatttagtataatcatagatgtcg 13427629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 15902830 - 15902878
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||| |||||||| ||||||||||||  ||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtg 15902878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 17851437 - 17851477
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||| | ||||| |||||||||||||||||||||    
T  17851437 gctaataattttagaaaatcacataattcagtgtaattata 17851477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 27980805 - 27980841
Alignment:
Q  51 aataatttgaaaaaatgacataattcagtgtaattat 87  Q
    |||||||| |||||||||||||||||| |||||||||    
T  27980805 aataattttaaaaaatgacataattcaatgtaattat 27980841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 39138464 - 39138500
Alignment:
Q  62 aaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  39138464 aaaatcacataattcagtgtaattatatatgtcggtg 39138500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 7977888 - 7977833
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  7977888 acacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtg 7977833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 16766698 - 16766753
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  16766698 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 16766753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 28715296 - 28715351
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  28715296 acacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtg 28715351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 10770733 - 10770677
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  10770733 aacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 10770677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 5970166 - 5970111
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  5970166 acacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtg 5970111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 7938117 - 7938172
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| | |||||| ||||||||||||| ||||||||    
T  7938117 acacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtg 7938172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 9107428 - 9107373
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||    
T  9107428 acacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtg 9107373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 12696325 - 12696368
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  12696325 acacagctaataatttgaaaaaattacataattcagtgtaatta 12696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 34595135 - 34595190
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  34595135 acacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 34595190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 7265652 - 7265596
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||||  ||||||||    
T  7265652 aacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtg 7265596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 31959161 - 31959213
Alignment:
Q  44 cacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcgg 96  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| || ||||||    
T  31959161 cacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 7801214 - 7801159
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  7801214 acacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtg 7801159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 9025552 - 9025497
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||  ||||||||    
T  9025552 acactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtg 9025497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 16833309 - 16833364
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||| || ||||||||    
T  16833309 acacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtg 16833364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 17841647 - 17841604
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||| ||||||||||    
T  17841647 acacagctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 7569227 - 7569181
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  7569227 aacacagataataatttgagaaaattacataattcagtgtaattata 7569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 16388283 - 16388245
Alignment:
Q  51 aataatttgaaaaaatgacataattcagtgtaattataa 89  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaattataa 16388245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 1532241 - 1532286
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  1532241 acaccgctaataatttgataaaattacataattcagtgtaattata 1532286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 9195806 - 9195757
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| |||||||||||||| ||||||||||||  ||||||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtg 9195757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 9522898 - 9522947
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||| ||||||| ||||||||||||||||||| || ||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtg 9522947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 19040353 - 19040398
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  19040353 acaccgctaataatttgagaaaatcacataattcagtgtaattata 19040398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 31384927 - 31384964
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||| |||||||||||||||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaatta 31384964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 1191758 - 1191706
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||||||||||||||||||||| | ||| ||||||||||||||| || |||||    
T  1191758 acacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 1681759 - 1681811
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||| |||||||||||||||||| || |||||||||||||||| || |||||    
T  1681759 acacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 8713980 - 8714036
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| |||||||||||||||| | ||||||||||||||||||| |||||| ||||    
T  8713980 acacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtg 8714036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 9911587 - 9911531
Alignment:
Q  43 acacagctaataatttgaaa-aaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||| || ||||||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtgtcggtg 9911531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 17341715 - 17341671
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtc 94  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  17341715 taataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 34225867 - 34225823
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattat 87  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||    
T  34225867 acacaactaataatttgaaaaaatcgcataattcagtgtaattat 34225823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 426572 - 426517
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||||||||| |||||||| | |||||||| || ||||||||    
T  426572 acacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtg 426517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 853917 - 853862
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| |||||||| |||| ||||| || ||||||||    
T  853917 acacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtg 853862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 3398620 - 3398674
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||| | ||||||    
T  3398620 acacagctaataatttg-aaaaatcatataattcagtgtaattataagtatcggtg 3398674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 7151419 - 7151458
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattata 7151458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 8365577 - 8365522
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||||| || ||||||||| ||||||||| || ||||||||    
T  8365577 acacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtg 8365522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 8777031 - 8776988
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||    
T  8777031 acacaactaataatttgaaaaaatcacaaaattcagtgtaatta 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 9658880 - 9658935
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||| | ||||| |||||||||||||||||||||  ||||||||    
T  9658880 acaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtg 9658935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 15489790 - 15489735
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| ||| |||||| |||||||| || ||||||||    
T  15489790 acacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtg 15489735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 17435204 - 17435243
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  17435204 agctaataattttaaaaaattacataattcagtgtaatta 17435243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 78
Target Start/End: Complemental strand, 25010260 - 25010225
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcag 78  Q
    |||||||||||||||||||||||| |||||||||||    
T  25010260 acacagctaataatttgaaaaaatcacataattcag 25010225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 25038122 - 25038075
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    ||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  25038122 taataatttgagaaaattacataatttagtgtaattacaaatgtcggt 25038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 28152104 - 28152154
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||| | ||||||||||||||||||| || ||||||||    
T  28152104 agctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtg 28152154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 32511724 - 32511669
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||| | ||||| |||||||||||||||||||||| ||| ||||    
T  32511724 acaccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtg 32511669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 33001347 - 33001292
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||||||||| |||||||| | ||||||||||  ||||||||    
T  33001347 acactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtg 33001292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 33468440 - 33468389
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtc 94  Q
    |||| ||||||||||||||||||| || ||||||| |||||||||| |||||    
T  33468440 acaccgctaataatttgaaaaaataacttaattcaatgtaattatatatgtc 33468389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 1700362 - 1700408
Alignment:
Q  52 ataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||| ||||||| ||||| |||||||||||||||| ||||||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtg 1700408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 2117083 - 2117129
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||||||||||||||||| |||||||||| || |||||||| |||||    
T  2117083 ctaataatttgaaaaaatcacataattcaatgcaattataagtgtcg 2117129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 7086801 - 7086851
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| ||||| |||||||| ||||||||||||  ||||||||    
T  7086801 gctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtg 7086851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 17168902 - 17168940
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  17168902 taataatttgaaaaaatgacataattcaatgtaactata 17168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 30866203 - 30866157
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||| ||||||||||||| ||||| |||||||||| ||||||||||    
T  30866203 aacaccgctaataatttgagaaaatcacataattcaatgtaattata 30866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 34446573 - 34446607
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaat 84  Q
    ||||||||||| |||||||||||||||||||||||    
T  34446573 taataatttgagaaaatgacataattcagtgtaat 34446607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 2224230 - 2224275
Alignment:
Q  46 cagctaataatttgaaaaaatgacataattcagtgtaattataaat 91  Q
    ||||||||||||| ||||||| | ||||||||||||||||| ||||    
T  2224230 cagctaataatttaaaaaaatcatataattcagtgtaattacaaat 2224275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 6898333 - 6898284
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| |||| |||||||| |||||||||| || ||||||||    
T  6898333 ctaataatttgaacaaattacataattaagtgtaattacaagtgtcggtg 6898284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 7973665 - 7973710
Alignment:
Q  53 taatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||| |||||||| ||||||||||||| ||||||||    
T  7973665 taatttaaaaaaattacataattaagtgtaattataagtgtcggtg 7973710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 7996436 - 7996391
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| | |||||||||||||||||||    
T  7996436 acactgctaataatttgagaaaatcatataattcagtgtaattata 7996391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 8022365 - 8022410
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| | |||||||||||||||||||    
T  8022365 acactgctaataatttgagaaaatcatataattcagtgtaattata 8022410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 8931660 - 8931615
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||| ||||||| ||||| |||||||||||| ||||||||    
T  8931660 acacagctaaaaatttgagaaaataacataattcagtataattata 8931615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 10842533 - 10842574
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaat 84  Q
    |||| ||||||||||||||||||| |||||||| ||||||||    
T  10842533 acaccgctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 13851737 - 13851782
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| || ||||||||||||||||||    
T  13851737 acaccgctaataatttgagaaaataacgtaattcagtgtaattata 13851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 26314684 - 26314639
Alignment:
Q  51 aataatttgaaaaaatgacataattcagtgtaattataaatgtcgg 96  Q
    |||||||||||||||| | |||||||| |||||||||| |||||||    
T  26314684 aataatttgaaaaaatcatataattcaatgtaattatatatgtcgg 26314639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 26562690 - 26562735
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||| ||||||| ||||| |||||||||||||||||||||    
T  26562690 acactgctaaaaatttgagaaaatcacataattcagtgtaattata 26562735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 31429059 - 31429006
Alignment:
Q  46 cagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| |||||| | ||||||||||||||||||| |||||| ||||    
T  31429059 cagctaataatttaaaaaaaatcacataattcagtgtaattacaaatgtaggtg 31429006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 31579276 - 31579239
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 403915 - 403867
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |||||||| ||||||| || || ||||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtg 403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 3209382 - 3209438
Alignment:
Q  43 acacagctaataatttg-aaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| ||||||| |||||||| ||||| |||| || ||||||||    
T  3209382 acacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtg 3209438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 4877943 - 4877999
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||||||| | |||||||| ||| |||||| || ||||||||    
T  4877943 acacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtg 4877999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 6349788 - 6349752
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  6349788 taataatttgaaaaaattacataattcattgtaatta 6349752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 9617442 - 9617490
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||| |||||||||| ||||||||||  ||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 9617490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 11784267 - 11784219
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||| |||| | |||||||||||||| |||||||||    
T  11784267 taataatttgagaaaatcacatgaatcagtgtaattatatatgtcggtg 11784219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 18252802 - 18252766
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  18252802 taataatttaaaaaaatgacataatttagtgtaatta 18252766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 21395366 - 21395311
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||| ||||| |||||||| |||||||||| || ||||||||    
T  21395366 aacaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtg 21395311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 24645481 - 24645537
Alignment:
Q  43 acacagctaataatttg-aaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| ||||||| |||||||||||| || ||| || ||||||||    
T  24645481 acacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgtcggtg 24645537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 32978958 - 32978902
Alignment:
Q  43 acacagctaataatttgaa-aaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||| ||||  |||||||| |||||||||| || ||||||||    
T  32978958 acacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtg 32978902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 34073400 - 34073360
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||||| |||||  ||||||||||||||||||||    
T  34073400 gctaataatttgagaaaatctcataattcagtgtaattata 34073360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 21191114 - 21191059
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  21191114 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 21191059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 24906360 - 24906305
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || |||||||    
T  24906360 aacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggt 24906305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 41633736 - 41633791
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  41633736 acacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtg 41633791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 21576804 - 21576751
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  21576804 aacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 6247623 - 6247678
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  6247623 acacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 6247678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 7677706 - 7677761
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||    
T  7677706 acacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtg 7677761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 21522751 - 21522806
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| || ||||||||    
T  21522751 acacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtg 21522806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 21533317 - 21533372
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| || ||||||||    
T  21533317 acacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtg 21533372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 39698542 - 39698585
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  39698542 acacagctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 42893361 - 42893416
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||    
T  42893361 acacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtg 42893416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 14674270 - 14674323
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcgg 96  Q
    |||||||||||||||||||||||| |||||||| |||||||||| || ||||||    
T  14674270 acacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 40131628 - 40131677
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  40131628 ctaataatttgaaaaaatcacataattcagtttaattataaatatcggtg 40131677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 31084324 - 31084376
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||||||||||||||||||||||| |||||||||| |||||||| || |||||    
T  31084324 acacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 31084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 8420032 - 8420083
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||| |||||||||| |||||||| || ||||||||    
T  8420032 agctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtg 8420083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 13287457 - 13287402
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||||||||| |||||||||||||||| || || ||||||||    
T  13287457 acacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtg 13287402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 43001801 - 43001844
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  43001801 acactgctaataatttgaaaaaattacataattcagtgtaatta 43001844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 4344750 - 4344784
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaat 84  Q
    |||||||||||||||||||||||||||||||||||    
T  4344750 taataatttgaaaaaatgacataattcagtgtaat 4344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 22013415 - 22013461
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataa 89  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||    
T  22013415 acacagctaataatttggaaaaattacataatttagtgtaattataa 22013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 38749614 - 38749576
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  38749614 taataatttgaaaaaatgacataattcaatgtaattata 38749576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 6471947 - 6471902
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  6471947 acacggctaataatttgagaaaatcacataattcagtgtaattata 6471902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 25863212 - 25863257
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataagtgtcg 25863257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 31264446 - 31264491
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||| ||||||||||||||||||||||| |||| |||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcg 31264491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 17177082 - 17177026
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||||||||| | | |||||| |||||||| || ||||||||    
T  17177082 aacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcggtg 17177026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 27932236 - 27932284
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaat 91  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||| ||||    
T  27932236 acaccgctaataatttgagaaaattacataattcagtgtaattacaaat 27932284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 28588725 - 28588677
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||| ||||| |||||||||||||||||||||  ||||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtg 28588677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 30502447 - 30502391
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||| ||||| || ||||||||||||||||||  ||||||||    
T  30502447 aacaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtg 30502391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 30542790 - 30542734
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||| ||||| || ||||||||||||||||||  ||||||||    
T  30542790 aacaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtg 30542734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 3966504 - 3966559
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| ||| |||||||||||||||||  ||||||||    
T  3966504 acaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtg 3966559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 19579702 - 19579757
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||| ||||| |||||||| |||| ||||| || ||||||||    
T  19579702 acacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtg 19579757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 21351963 - 21351908
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||| |||||| | ||||||||||||||||||| || ||||||||    
T  21351963 acacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtg 21351908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 21542031 - 21542086
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||| |||| || ||||||||||||||||||| || ||||||||    
T  21542031 acacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtg 21542086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 30098334 - 30098381
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    ||||||||||| ||||| |||||||||| |||||||||| ||||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggt 30098381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 36642820 - 36642765
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| ||||||||||||||| ||||||| || ||||||| ||||| ||||||||    
T  36642820 acacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtg 36642765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 36838544 - 36838599
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| |||||||| ||||||||||||  ||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtg 36838599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 5468029 - 5467991
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattata 88  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattata 5467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 7218321 - 7218271
Alignment:
Q  47 agctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    |||||||||||| || |||| ||||||||||||||||||| || |||||||    
T  7218321 agctaataatttaaataaatcacataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 17593775 - 17593725
Alignment:
Q  48 gctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||| ||||| || |||||||||||||||||| |||| ||||    
T  17593775 gctaataatttgagaaaatcacgtaattcagtgtaattatatatgttggtg 17593725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 128
Target Start/End: Complemental strand, 21194093 - 21194063
Alignment:
Q  98 gcctaatccgaggagtgtccgtgctttatag 128  Q
    |||||||||||||||||||||||||||||||    
T  21194093 gcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 43564891 - 43564937
Alignment:
Q  52 ataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||| |||||| |||||||| ||||||||||||| ||||||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtg 43564937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 7997217 - 7997172
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||| ||||||| ||||| |||||||||||||| |||||    
T  7997217 taataatttgagaaaatgatataatacagtgtaattataagtgtcg 7997172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 14422907 - 14422949
Alignment:
Q  45 acagctaataatttgaaaaaatgacataattcagtgtaattataa 89  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||    
T  14422907 acagctaataattt--aaaaatcacataattcagtgtaattataa 14422949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 22423864 - 22423815
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| ||||| |||||||||| | |||||||| |||||||||    
T  22423864 ctaataatttgagaaaatcacataattcaatataattatatatgtcggtg 22423815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 24273088 - 24273043
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||| || |||||||| ||||| |||||||||||||||||||||    
T  24273088 acacagttattaatttgagaaaatcacataattcagtgtaattata 24273043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 24389126 - 24389171
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||||| || |||||||| ||||| |||||||||||||||||||||    
T  24389126 acacagttattaatttgagaaaatcacataattcagtgtaattata 24389171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 41091315 - 41091270
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| |||||| |||||| ||||| |||||||||||||||||||||    
T  41091315 acactgctaatgatttgagaaaatcacataattcagtgtaattata 41091270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 131760 - 131807
Alignment:
Q  41 gaacacagctaataatttgaaaaaatgac--ataattcagtgtaatta 86  Q
    |||||||||||||||||||||||||| ||  |||||| ||||||||||    
T  131760 gaacacagctaataatttgaaaaaatcacatataattaagtgtaatta 131807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 2548395 - 2548443
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||| || ||||| ||||||||||||||||| |||| ||||||||    
T  2548395 taataattagagaaaattacataattcagtgtaatcataagtgtcggtg 2548443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 15883988 - 15884044
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||| |||||||| |||||| | ||||||||||||||||||| || ||||||||    
T  15883988 acacagcaaataatttaaaaaaaatcacataattcagtgtaattacaagtgtcggtg 15884044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 22423794 - 22423762
Alignment:
Q  98 gcctaatccgaggagtgtccgtgctttatagat 130  Q
    |||||||||||||||||||||||||| ||||||    
T  22423794 gcctaatccgaggagtgtccgtgcttcatagat 22423762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 30136722 - 30136678
Alignment:
Q  53 taatttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    |||||| ||||||| || ||||||| |||||||||||||||||||    
T  30136722 taattttaaaaaattacgtaattcaatgtaattataaatgtcggt 30136678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 20173 - 20216
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  20173 acacagctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 51812 - 51855
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  51812 acacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 33421 - 33378
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  33421 acacagctaataatttgaaaaaataacataattcagtgtaatta 33378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 192300 - 192233
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtgcctaatccgaggagtgtcc 117  Q
    ||||||||||| ||||| ||||||||| ||||||||| || |||| |||||||| |||||||||||||    
T  192300 taataatttgagaaaattacataattcggtgtaattacaagtgtctgtgcctaacccgaggagtgtcc 192233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 178877 - 178833
Alignment:
Q  43 acacagctaataatttgaaaaaatga-cataattcagtgtaatta 86  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||    
T  178877 acacaactaataatttgaaaaaatcatcataattcagtgtaatta 178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 53189 - 53238
Alignment:
Q  51 aataatttgaaaaaatgacataattcagtgtaattataaatgtcggtgcc 100  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgcc 53238  T

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Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 130483 - 130539
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtgc 99  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||| || |||||||||    
T  130483 acacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggtgc 130539  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 83172 - 83216
Alignment:
Q  54 aatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||    
T  83172 aatttaaaaaaatgacataattcagtgtaattacaaatgtcggtg 83216  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 92808 - 92851
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||    
T  92808 acaccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

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Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 123625 - 123684
Alignment:
Q  42 aacacagctaataatttgaaaaaa---tgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| ||||||   | ||||||||||||||||||| || ||||||||    
T  123625 aacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcggtg 123684  T

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Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 520 - 465
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||| || ||||||||    
T  520 acactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtg 465  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 14531 - 14574
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  14531 acacaactaataatttgaaaaaatcacataattcagtgtaatta 14574  T

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Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 17807 - 17752
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  17807 acacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtg 17752  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 241595 - 241650
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||| | ||||||||    
T  241595 acacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtg 241650  T

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Target: scaffold1528 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 1036 - 1081
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattata 88  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||    
T  1036 acaccgctaataatttgaaaaaattacataattcagtgtaactata 1081  T

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Target: scaffold0126 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 19153 - 19200
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  19153 taataattt-aaaaaatgacataattcagtgtgattaaaaatgtcggtg 19200  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 63773 - 63829
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||| ||||| ||||||||||||| ||||| || ||||||||    
T  63773 aacaccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtg 63829  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 263431 - 263379
Alignment:
Q  42 aacacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtc 94  Q
    ||||| ||||||||||||| ||||  |||||||||||||||||||||| ||||    
T  263431 aacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtc 263379  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 225326 - 225274
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    |||||| ||||||||||| ||||||||||||| || ||||||||||| |||||    
T  225326 acacagataataatttgagaaaatgacataatacaatgtaattataagtgtcg 225274  T

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Target: scaffold0722 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 7090 - 7047
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaatta 86  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||    
T  7090 acacagctaataatttgaaaaaattacataatttagtataatta 7047  T

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Target: scaffold0450 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 8693 - 8638
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| ||||||||||||||| || ||||||||| || |||||| |||||||||||    
T  8693 acacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtg 8638  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 23421 - 23476
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||| |||||| |  ||||||| |||||||||||||||||||||| ||||||||    
T  23421 acacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtg 23476  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 8799 - 8854
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||||||||||||||| | || ||| |||||||||| || ||||||||    
T  8799 acacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtg 8854  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 23771 - 23826
Alignment:
Q  44 cacagctaataatttgaaaaaa-tgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||| |||||||||||||||| | ||||||||||||||||||| || ||||||||    
T  23771 cacagttaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtg 23826  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 135370 - 135315
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||| ||||||||||||| ||||| ||||||||| |||||||||||  ||||||||    
T  135370 acactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtg 135315  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 7369 - 7323
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataa 89  Q
    ||||| ||||||||||| |||||| |||||||| |||||||||||||    
T  7369 acacaactaataatttggaaaaatcacataatttagtgtaattataa 7323  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 44583 - 44529
Alignment:
Q  43 acacagctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggt 97  Q
    |||| ||||| ||||||| ||||| |||||||||||||||||||||  |||||||    
T  44583 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 174594 - 174556
Alignment:
Q  60 aaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  174594 aaaaaatgacataattcagcgtaattacaaatgtcggtg 174556  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 180107 - 180069
Alignment:
Q  60 aaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  180107 aaaaaatgacataattcagcgtaattacaaatgtcggtg 180069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 8104 - 8071
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaa 83  Q
    ||||||||||| ||||||||||||||||||||||    
T  8104 taataatttgagaaaatgacataattcagtgtaa 8071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 9799 - 9750
Alignment:
Q  49 ctaataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||||||| ||||| || ||||||||||||||||||  ||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtg 9750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 90851 - 90896
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcg 95  Q
    ||||||||||| ||||| | ||||||||||||||||||| ||||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

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Target: scaffold0793 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 4851 - 4819
Alignment:
Q  98 gcctaatccgaggagtgtccgtgctttatagat 130  Q
    |||||||||||||||||||||||||| ||||||    
T  4851 gcctaatccgaggagtgtccgtgcttcatagat 4819  T

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Target: scaffold0793; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 4942 - 4898
Alignment:
Q  43 acacagctaataatttgaaaaaa-tgacataattcagtgtaatta 86  Q
    |||||||||||||||| |||||| | |||||||||||||||||||    
T  4942 acacagctaataatttaaaaaaaatcacataattcagtgtaatta 4898  T

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Target: scaffold0236 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 25819 - 25771
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaattataaatgtcggtg 98  Q
    |||||||| || ||||| |||||||| ||||||||||||| ||||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcggtg 25771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 3900 - 3864
Alignment:
Q  50 taataatttgaaaaaatgacataattcagtgtaatta 86  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaatta 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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