View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4900-Insertion-1 (Length: 815)
Name: NF4900-Insertion-1
Description: NF4900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4900-Insertion-1 |
 | |
|
| [»] chr7 (3 HSPs) |
| |
|
| [»] scaffold0736 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 337; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 375 - 815
Target Start/End: Original strand, 42883584 - 42884029
Alignment:
| Q |
375 |
caaaagagggcaaacgttcaaaaagaaaactacaaatct----gaacattttgaggcacgcaagcgtcggatctgtcatcaaagagaatattttgaagct |
470 |
Q |
| |
|
||||||||||||||| | ||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
42883584 |
caaaagagggcaaacatccaagaagaaaactacaaatctaaacgaacatttcgaggcacgcaagcgtcggatttgtcatcaaagagaatattttgaagct |
42883683 |
T |
|
| Q |
471 |
ccctcagaggagtctccattacatggaaatcaaaagcgttcaaagttaaattgaagttagctaaccaatcagctgctctattaccttcacgctaagtatg |
570 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42883684 |
cccttggaggagtctccattacatggaaatcaaaagcgttcaaagttaaattgaagttagctaaccaatcagctgctctattaccttcacgctaagtatg |
42883783 |
T |
|
| Q |
571 |
gttaattcgaacatgccaattcatatttttaaactcacagatgcgccgagtcaaagtaggaacactcccattaaaattgcaatttcatgttatcatgtcg |
670 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||| ||||||| |||||| |||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
42883784 |
gttaatttgaacatgccaattcatgtttttaaactcacaaatgcgccaagtcaaggtaggagcactcccattaaaattgtaatttcatgttatcatgtcg |
42883883 |
T |
|
| Q |
671 |
accaacaccttgaaatcactataatttattcatgattgtatgtatctaactataatatgtacaataaattgaaag-nnnnnnnngtgattttatgagtca |
769 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
42883884 |
accaacaccttggaatcactataatttattcatgattgtatgtatctaactataatatgtacaataaattgaaagagaaaaaaagtgattttatgagtca |
42883983 |
T |
|
| Q |
770 |
caaaaatatagttagtgtcatttaaattcgttcttagttagcctca |
815 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42883984 |
caaaaatatagttagtgtcatttaaattcgttcttagttagcctca |
42884029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 25 - 348
Target Start/End: Original strand, 42882663 - 42882987
Alignment:
| Q |
25 |
ttattgatgtgtattggtgcttaggttgggtttgatggtgtgttctctaatgaggttggtgctcatttcatccaatttataaggatgactgactagaggg |
124 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42882663 |
ttattgatgtgtattggtgctgaggttgggtttgatggtgtgttctctaatgaggttgttgctcatttcatccaatttataaggatgactgactagaggg |
42882762 |
T |
|
| Q |
125 |
aagtgggcaaagtagggttagacatttaatttggagtgttggtgtggctctttcg-nnnnnnnaagaaatcaaattatattcaatgattatgatggtaca |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42882763 |
aagtgggcaaagtagggttagacatttaatttggagtgttggtgtggctctttcgttttttttaagaaatcaaattatattcaatgattatgatggtaca |
42882862 |
T |
|
| Q |
224 |
tatatggttgactgcaatggtgttatttctcacattaaagtattttcgtggagttggtttgtgtttaggatggatatgttaaggttcaaattttgggagt |
323 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
42882863 |
tatatggttgactgcaatggtgttatttctcacattaaaatattttcgtggagttggtttgtgtttagaatggatatgttaaggtttaaattttgggagt |
42882962 |
T |
|
| Q |
324 |
ttcctgtgttctcttaaaaaagatg |
348 |
Q |
| |
|
|||||||||||| |||||||||||| |
|
|
| T |
42882963 |
ttcctgtgttcttttaaaaaagatg |
42882987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 448 - 510
Target Start/End: Complemental strand, 38273760 - 38273700
Alignment:
| Q |
448 |
atcaaagagaatattttgaagctccctcagaggagtctccattacatggaaatcaaaagcgtt |
510 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
38273760 |
atcaaagaggatattttgaagctcct--agaggagtctccattacatgtgaatcaaaagcgtt |
38273700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0736 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0736
Description:
Target: scaffold0736; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 375 - 690
Target Start/End: Complemental strand, 6739 - 6420
Alignment:
| Q |
375 |
caaaagagggcaaacgttcaaaaagaaaactacaaatctgaacat----tttgaggcacgcaagcgtcggatctgtcatcaaagagaatattttgaagct |
470 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||| || |||| | |||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
6739 |
caaaagagggcaaaagtccaaaaagaaaactacaaaactaaacaaacactccgaggcatgcaagcgccggatctgtcatcaaagagaatattttgaagct |
6640 |
T |
|
| Q |
471 |
ccctcagaggagtctccattacatggaaatcaaaagcgttcaaagttaaattgaagttagctaaccaatcagctgctctattaccttcacgctaagtatg |
570 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||||||||| ||||||||| ||||||| |
|
|
| T |
6639 |
ccctcggaggagtctccattacatggaagtcaaaagcgttcaaagttaaactaaagttagctaaccaatcggctgctctattgccttcacgccaagtatg |
6540 |
T |
|
| Q |
571 |
gttaattcgaacatgccaattcatatttttaaactcacagatgcgccgagtcaaagtaggaacactcccattaaaattgcaatttcatgttatcatgtcg |
670 |
Q |
| |
|
||||||| ||||||||||||||| | ||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6539 |
gttaatttaaacatgccaattcatgtctttaaactcacggatgcgccgaatcaaggtaggagcactcccattaatattgcaatttcatgttatcatgtcg |
6440 |
T |
|
| Q |
671 |
accaacaccttgaaatcact |
690 |
Q |
| |
|
|||||||||||| ||||||| |
|
|
| T |
6439 |
accaacaccttggaatcact |
6420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 375 - 690
Target Start/End: Complemental strand, 39182438 - 39182117
Alignment:
| Q |
375 |
caaaagagggcaaacgttcaaaaagaaaactacaaatct----gaacattttgaggcacgcaagcgtcggatctgtcatcaaagagaatattttgaagct |
470 |
Q |
| |
|
|||||||||||||| | ||| ||||||||||||||||| ||||||| |||||| |||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
39182438 |
caaaagagggcaaaagcccaagaagaaaactacaaatctaaaagaacattccgaggcattcaagcgacggacctgtcatcaaagagaatattttgaagct |
39182339 |
T |
|
| Q |
471 |
ccctcagaggagtctccattacatggaaatcaaaagcgttcaaagttaaattgaagttagctaaccaatcagctgctctattaccttcacgctaagtatg |
570 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||| || | |||| ||||||| |
|
|
| T |
39182338 |
ccctcggaggagtctccattacatggaaatcaaaagcgtgcaaagttaaactgaagttaactaaccaatcagctgctctattgccgtgacgccaagtatg |
39182239 |
T |
|
| Q |
571 |
gttaattcgaacatgccaattcatatttttaaactcacagatgcgccgagtcaaagtagga--acactcccattaaaattgcaatttcatgttatcatgt |
668 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||| |||||||||| |||| |||||| ||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
39182238 |
tttaatttgaacatgccaattcatgtttttaaactcacggatgcgccgaatcaaggtaggagcacactcccattaatattgcaatttcttgttatcatgt |
39182139 |
T |
|
| Q |
669 |
cgaccaacaccttgaaatcact |
690 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
39182138 |
cgaccaacaccttggaatcact |
39182117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 600
Target Start/End: Original strand, 11895990 - 11896127
Alignment:
| Q |
463 |
ttgaagctccctcagaggagtctccattacatggaaatcaaaagcgttcaaagttaaattgaagttagctaaccaatcagctgctctattaccttcacgc |
562 |
Q |
| |
|
||||||||| || ||||||||||| || | || | |||||| |||| ||||| || | | || ||||||| |||||| |||| |||||| ||||||||| |
|
|
| T |
11895990 |
ttgaagctctctaagaggagtctcaatcatgtgtagatcaaaggcgtccaaagatagactaaaattagctagccaatctgctgatctatttccttcacgc |
11896089 |
T |
|
| Q |
563 |
taagtatggttaattcgaacatgccaattcatattttt |
600 |
Q |
| |
|
| |||||||| || ||||||||||| |||| ||||| |
|
|
| T |
11896090 |
catgtatggttgatatgaacatgccaactcatgttttt |
11896127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 179; Significance: 4e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 375 - 690
Target Start/End: Complemental strand, 45481865 - 45481546
Alignment:
| Q |
375 |
caaaagagggcaaacgttcaaaaagaaaactacaaatct----gaacattttgaggcacgcaagcgtcggatctgtcatcaaagagaatattttgaagct |
470 |
Q |
| |
|
|||||||||||||| || ||| |||||||| ||||| || ||||||| |||||| ||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
45481865 |
caaaagagggcaaaagtccaagaagaaaacaacaaaactaaacgaacattccgaggcatgcaagcgccgaatctgtcatcaaagagaatattttgaagct |
45481766 |
T |
|
| Q |
471 |
ccctcagaggagtctccattacatggaaatcaaaagcgttcaaagttaaattgaagttagctaaccaatcagctgctctattaccttcacgctaagtatg |
570 |
Q |
| |
|
| ||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
45481765 |
ctctcggaggagtctccattacatggaaatcaaaagcgttcaaagttaaactaaagttagctaaccaatcggctgctctattgccttcacgtcaagtatg |
45481666 |
T |
|
| Q |
571 |
gttaattcgaacatgccaattcatatttttaaactcacagatgcgccgagtcaaagtaggaacactcccattaaaattgcaatttcatgttatcatgtcg |
670 |
Q |
| |
|
|||||| ||||||||||||||| | ||||||||||| |||||||||| ||| |||||| |||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
45481665 |
attaatttaaacatgccaattcatgtctttaaactcacggatgcgccgaaccaaggtaggagcactcccattaatattgcaatttcctgttatcatgtcg |
45481566 |
T |
|
| Q |
671 |
accaacaccttgaaatcact |
690 |
Q |
| |
|
|||||||||||| ||||||| |
|
|
| T |
45481565 |
accaacaccttggaatcact |
45481546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 169; Significance: 3e-90; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 414 - 690
Target Start/End: Complemental strand, 2078020 - 2077744
Alignment:
| Q |
414 |
gaacattttgaggcacgcaagcgtcggatctgtcatcaaagagaatattttgaagctccctcagaggagtctccattacatggaaatcaaaagcgttcaa |
513 |
Q |
| |
|
||||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2078020 |
gaacattccgaggcatgcaagctccggatttgtcatcaaatagaatattttgaagctccctcggaggagtctccattacatggaaatcaaaagcgttcaa |
2077921 |
T |
|
| Q |
514 |
agttaaattgaagttagctaaccaatcagctgctctattaccttcacgctaagtatggttaattcgaacatgccaattcatatttttaaactcacagatg |
613 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||| |||| |||| ||||||| |||||| ||||||||||||||| | ||||||||||| |||| |
|
|
| T |
2077920 |
agttaaactgaagttagctaaccaatcagctcctctattgccttaacgccaagtatgattaatttaaacatgccaattcatgtctttaaactcacggatg |
2077821 |
T |
|
| Q |
614 |
cgccgagtcaaagtaggaacactcccattaaaattgcaatttcatgttatcatgtcgaccaacaccttgaaatcact |
690 |
Q |
| |
|
|||||| |||| |||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||| |
|
|
| T |
2077820 |
cgccgaatcaaggtaggagaactcccattaatattgcaatttcctgttatcctgtcgaccaacaccttggaatcact |
2077744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 377 - 540
Target Start/End: Complemental strand, 26722914 - 26722743
Alignment:
| Q |
377 |
aaagagggcaaacgttcaaaaagaaaactacaaatct----gaacattttgaggcacgcaagcgtcggatctgtcatcaaagagaatattttgaagctcc |
472 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||| ||||||| |||||| ||||| | || ||||||| |||||||||||||||||||| ||| |
|
|
| T |
26722914 |
aaagagggcaaaagttcaagaagaaaactataaatctaaacgaacattccgaggcatgcaagtgccgcatctgtcttcaaagagaatattttgaagttcc |
26722815 |
T |
|
| Q |
473 |
ctca----gaggagtctccattacatggaaatcaaaagcgttcaaagttaaattgaagttagctaaccaatc |
540 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||| |
|
|
| T |
26722814 |
atatataggaggagtctccattacatggaaatcaaaagcgtttaaaggtaaactaaagttagctaaccaatc |
26722743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 414 - 504
Target Start/End: Original strand, 38985332 - 38985422
Alignment:
| Q |
414 |
gaacattttgaggcacgcaagcgtcggatctgtcatcaaagagaatattttgaagctccctcagaggagtctccattacatggaaatcaaa |
504 |
Q |
| |
|
||||||| |||| || ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||| |
|
|
| T |
38985332 |
gaacattctgagccatacaagcgtcgtatctgtcatcaaagagaatattttaaagctccctaggaggagtctctattacatgaaaatcaaa |
38985422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 414 - 504
Target Start/End: Original strand, 39016429 - 39016519
Alignment:
| Q |
414 |
gaacattttgaggcacgcaagcgtcggatctgtcatcaaagagaatattttgaagctccctcagaggagtctccattacatggaaatcaaa |
504 |
Q |
| |
|
||||||| |||| || ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||| |
|
|
| T |
39016429 |
gaacattctgagccatacaagcgtcgtatctgtcatcaaagagaatattttaaagctccctaggaggagtctctattacatgaaaatcaaa |
39016519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 151; Significance: 2e-79; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 375 - 690
Target Start/End: Complemental strand, 1189340 - 1189021
Alignment:
| Q |
375 |
caaaagagggcaaacgttcaaaaagaaaactacaaatctgaac----attttgaggcacgcaagcgtcggatctgtcatcaaagagaatattttgaagct |
470 |
Q |
| |
|
||||||||| |||| |||| ||||||||||||||||| ||| ||| ||||||| ||||| |||| || || |||||||||||||||||||||||| |
|
|
| T |
1189340 |
caaaagaggacaaaaactcaagaagaaaactacaaatctaaacgaatattctgaggcatgcaagtgtcgaatatgacatcaaagagaatattttgaagct |
1189241 |
T |
|
| Q |
471 |
ccctcagaggagtctccattacatggaaatcaaaagcgttcaaagttaaattgaagttagctaaccaatcagctgctctattaccttcacgctaagtatg |
570 |
Q |
| |
|
|||| ||||||||||||||||| ||||| |||| |||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||| ||||||| |
|
|
| T |
1189240 |
ccctatgaggagtctccattacacagaaataaaaaacgttcaaagttaaattaaagttagctaatcaatcagctactctattgccttcacgtcaagtatg |
1189141 |
T |
|
| Q |
571 |
gttaattcgaacatgccaattcatatttttaaactcacagatgcgccgagtcaaagtaggaacactcccattaaaattgcaatttcatgttatcatgtcg |
670 |
Q |
| |
|
||||||| | |||||||||||||| |||| ||||||| ||||||| || | || ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1189140 |
gttaatttgcacatgccaattcatgttttcaaactcatggatgcgctgaataaatgtaggaacactcccattaatattgcaatttcatgttatcatgtcg |
1189041 |
T |
|
| Q |
671 |
accaacaccttgaaatcact |
690 |
Q |
| |
|
| ||||||||| ||||||| |
|
|
| T |
1189040 |
atcaacacctttgaatcact |
1189021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 138; Significance: 1e-71; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 439 - 644
Target Start/End: Complemental strand, 40099799 - 40099595
Alignment:
| Q |
439 |
ggatctgtcatcaaagagaatattttgaagctccctcagaggagtctccattacatggaaatcaaaagcgttcaaagttaaattgaagttagctaaccaa |
538 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||| |
|
|
| T |
40099799 |
ggatctgtcatcaaagagattattttgaagctccctcggaggagtctccattacatggaaatcaaaagtgttcaaagttaaattgaagtcaactaaccaa |
40099700 |
T |
|
| Q |
539 |
tcagctgctctattaccttcacgctaagtatggttaattcgaacatgccaattcatatttttaaactcacagatgcgccgagtcaaagtaggaacactcc |
638 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||| || |||| |||||| |||||| |
|
|
| T |
40099699 |
tcagctgctctattgccttcacgc-cagtatggttaattcgcacatgtcaattcatgtttttaaactcacagatacgctgaatcaaggtaggagcactcc |
40099601 |
T |
|
| Q |
639 |
cattaa |
644 |
Q |
| |
|
|||||| |
|
|
| T |
40099600 |
cattaa |
40099595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 447 - 690
Target Start/End: Original strand, 40875247 - 40875490
Alignment:
| Q |
447 |
catcaaagagaatattttgaagctccctcagaggagtctccattacatggaaatcaaaagcgttcaaagttaaattgaagttagctaaccaatcagctgc |
546 |
Q |
| |
|
||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||| | ||||||||| || | |||||| ||||||||||||| || |
|
|
| T |
40875247 |
catcaaagagaatattttgaagctctctaggagaagtctccattacatagaaatcaaaaaccttcaaagtttaactaaagttaactaaccaatcagcggc |
40875346 |
T |
|
| Q |
547 |
tctattaccttcacgctaagtatggttaattcgaacatgccaattcatatttttaaactcacagatgcgccgagtcaaagtaggaacactcccattaaaa |
646 |
Q |
| |
|
|||||| |||||||| ||||| | |||||| | ||||||||||| | |||||||||||||| |||| | | |||| ||||||||||||||||||||| |
|
|
| T |
40875347 |
tctattgtcttcacgccaagtacgattaatttgcacatgccaattaaagtttttaaactcacatatgcatcaaatcaaggtaggaacactcccattaaaa |
40875446 |
T |
|
| Q |
647 |
ttgcaatttcatgttatcatgtcgaccaacaccttgaaatcact |
690 |
Q |
| |
|
|| ||||| ||||||||| | ||||||||||| |||||||| |
|
|
| T |
40875447 |
ttataattttttgttatcatattgaccaacacctaaaaatcact |
40875490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 600
Target Start/End: Original strand, 6468662 - 6468735
Alignment:
| Q |
527 |
ttagctaaccaatcagctgctctattaccttcacgctaagtatggttaattcgaacatgccaattcatattttt |
600 |
Q |
| |
|
||||||| |||||| |||| | | || ||||||||||| |||||||| || ||||||||||| |||||||||| |
|
|
| T |
6468662 |
ttagctagccaatctgctgatttgtttccttcacgctatgtatggttgatatgaacatgccaactcatattttt |
6468735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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