View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4900_low_3 (Length: 394)
Name: NF4900_low_3
Description: NF4900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4900_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 88 - 377
Target Start/End: Original strand, 42882341 - 42882630
Alignment:
| Q |
88 |
aacagaaatgtggaggatttacagtgaaagttgagcatgactctttgagtcattttaatatagtggatgctgattttggagacatctatgttagatttga |
187 |
Q |
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| T |
42882341 |
aacagaaatgtggaggatttacagtgaaagttgagcatgactctttgagtcattttaatatagtggatgctgattttggagacatctatgttagatttga |
42882440 |
T |
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| Q |
188 |
agaagtgctcaattccatcataggtgagtgttcttattttcaaaataaattgccaagtcggatgaagttatttagtagaggggtgtacattacattacat |
287 |
Q |
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| T |
42882441 |
agaagtgctcaattccatcataggtgagtgttcttattttcaaaataaattgccaagtcggatgaagttatttagtagaggggtgtacgttacattacat |
42882540 |
T |
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| Q |
288 |
gatatttaannnnnnngacgcaatgttaagctacatgatgaatatcaattaaactgtannnnnnnctattttgcattcctgatcgaagtg |
377 |
Q |
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| T |
42882541 |
gatatttaatttttttgacgcaatgttaagctacatgatgaatatcaattaaactgtatttttttctattttgcattcatgatcgaagtg |
42882630 |
T |
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