View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4903-Insertion-1 (Length: 1053)

Name: NF4903-Insertion-1
Description: NF4903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4903-Insertion-1
NF4903-Insertion-1
[»] chr2 (20 HSPs)
chr2 (319-1026)||(29203915-29204635)
chr2 (8-494)||(29198931-29199418)
chr2 (124-580)||(29194540-29194996)
chr2 (586-847)||(29196009-29196270)
chr2 (8-98)||(30728259-30728349)
chr2 (8-96)||(37918011-37918100)
chr2 (8-97)||(38975239-38975328)
chr2 (8-99)||(36554848-36554940)
chr2 (8-96)||(2979696-2979784)
chr2 (8-99)||(45166931-45167023)
chr2 (8-99)||(747014-747104)
chr2 (8-100)||(20283354-20283446)
chr2 (8-104)||(37861288-37861385)
chr2 (8-98)||(32037045-32037135)
chr2 (8-92)||(11913761-11913846)
chr2 (8-95)||(22338437-22338529)
chr2 (13-71)||(45168785-45168843)
chr2 (8-96)||(1857846-1857935)
chr2 (46-95)||(45168828-45168877)
chr2 (8-99)||(1928669-1928761)
[»] chr7 (20 HSPs)
chr7 (8-100)||(9195645-9195737)
chr7 (8-98)||(48565902-48565992)
chr7 (11-99)||(40667271-40667360)
chr7 (8-98)||(20948313-20948404)
chr7 (8-98)||(2133826-2133916)
chr7 (8-93)||(27087987-27088073)
chr7 (8-93)||(27190228-27190314)
chr7 (8-96)||(26924974-26925063)
chr7 (8-100)||(27749803-27749890)
chr7 (8-92)||(34381530-34381615)
chr7 (8-99)||(44279218-44279310)
chr7 (8-96)||(11564574-11564662)
chr7 (10-96)||(38189639-38189726)
chr7 (8-96)||(37567807-37567895)
chr7 (8-99)||(26642435-26642527)
chr7 (8-98)||(33153958-33154044)
chr7 (301-343)||(35070667-35070709)
chr7 (59-96)||(32392436-32392473)
chr7 (8-74)||(221749-221816)
chr7 (301-343)||(35096703-35096745)
[»] chr5 (10 HSPs)
chr5 (12-99)||(24077511-24077598)
chr5 (8-98)||(6618340-6618431)
chr5 (8-98)||(23101789-23101884)
chr5 (8-94)||(42379239-42379326)
chr5 (8-100)||(8807101-8807188)
chr5 (25-97)||(10378111-10378183)
chr5 (8-92)||(6920551-6920636)
chr5 (8-100)||(37505217-37505309)
chr5 (37-91)||(29692071-29692125)
chr5 (36-80)||(10378069-10378113)
[»] chr4 (25 HSPs)
chr4 (8-99)||(29350936-29351027)
chr4 (12-96)||(19509632-19509716)
chr4 (8-96)||(40630877-40630965)
chr4 (8-96)||(7882546-7882635)
chr4 (8-96)||(22460095-22460183)
chr4 (8-92)||(44234743-44234828)
chr4 (8-96)||(6807833-6807922)
chr4 (7-94)||(56208352-56208439)
chr4 (8-96)||(36968406-36968495)
chr4 (8-96)||(8087865-8087953)
chr4 (8-99)||(21357889-21357981)
chr4 (8-98)||(7315429-7315519)
chr4 (8-104)||(18103678-18103775)
chr4 (8-88)||(31989519-31989599)
chr4 (8-100)||(30301603-30301695)
chr4 (8-66)||(28510404-28510463)
chr4 (8-96)||(12689674-12689758)
chr4 (8-100)||(41548343-41548440)
chr4 (8-98)||(3006312-3006413)
chr4 (8-96)||(22453160-22453254)
chr4 (8-71)||(9390241-9390305)
chr4 (37-103)||(5835896-5835962)
chr4 (47-96)||(18665637-18665686)
chr4 (64-97)||(45286457-45286490)
chr4 (46-96)||(43141052-43141102)
[»] chr3 (18 HSPs)
chr3 (8-99)||(31167662-31167753)
chr3 (8-96)||(13282392-13282480)
chr3 (7-96)||(4606722-4606811)
chr3 (8-96)||(52787787-52787876)
chr3 (8-96)||(52794006-52794095)
chr3 (8-96)||(5331638-5331726)
chr3 (8-96)||(39233153-39233242)
chr3 (8-100)||(7047748-7047840)
chr3 (8-96)||(13276037-13276125)
chr3 (8-96)||(41283819-41283908)
chr3 (8-93)||(41720156-41720242)
chr3 (8-99)||(18096072-18096164)
chr3 (8-57)||(30760852-30760901)
chr3 (8-95)||(19007757-19007845)
chr3 (8-98)||(8406029-8406119)
chr3 (8-99)||(55346606-55346697)
chr3 (8-98)||(26412997-26413088)
chr3 (8-96)||(53251666-53251754)
[»] chr6 (11 HSPs)
chr6 (8-100)||(25359628-25359720)
chr6 (8-99)||(26631367-26631459)
chr6 (8-99)||(26737342-26737434)
chr6 (8-95)||(28329892-28329979)
chr6 (8-95)||(28507528-28507615)
chr6 (8-96)||(23306404-23306492)
chr6 (8-92)||(16802187-16802270)
chr6 (8-91)||(29730513-29730596)
chr6 (8-100)||(4582067-4582167)
chr6 (8-93)||(30800410-30800496)
chr6 (21-100)||(14628993-14629067)
[»] chr1 (15 HSPs)
chr1 (13-96)||(7880105-7880188)
chr1 (8-99)||(28728991-28729082)
chr1 (13-99)||(27276031-27276117)
chr1 (8-92)||(14752526-14752610)
chr1 (8-96)||(9196051-9196139)
chr1 (8-96)||(48187567-48187655)
chr1 (8-98)||(20360551-20360641)
chr1 (8-98)||(20550329-20550419)
chr1 (8-98)||(45310883-45310973)
chr1 (8-96)||(44773526-44773615)
chr1 (8-96)||(44700126-44700214)
chr1 (11-93)||(49535969-49536051)
chr1 (8-99)||(23832913-23833010)
chr1 (8-98)||(17171459-17171545)
chr1 (8-98)||(33334599-33334680)
[»] chr8 (15 HSPs)
chr8 (9-95)||(34322703-34322789)
chr8 (8-100)||(37807019-37807112)
chr8 (8-96)||(43204234-43204323)
chr8 (8-94)||(32776935-32777022)
chr8 (8-96)||(26849167-26849256)
chr8 (8-92)||(21257772-21257857)
chr8 (8-96)||(30592127-30592216)
chr8 (8-99)||(20162698-20162790)
chr8 (8-99)||(20194706-20194798)
chr8 (8-97)||(4860193-4860284)
chr8 (8-96)||(39679452-39679540)
chr8 (8-96)||(39154184-39154273)
chr8 (8-99)||(42576139-42576232)
chr8 (37-93)||(31220002-31220058)
chr8 (8-71)||(40672638-40672702)
[»] scaffold0063 (1 HSPs)
scaffold0063 (8-96)||(1789-1878)
[»] scaffold0136 (1 HSPs)
scaffold0136 (8-96)||(10925-11013)
[»] scaffold0048 (2 HSPs)
scaffold0048 (8-94)||(47032-47118)
scaffold0048 (8-86)||(73646-73725)
[»] scaffold1147 (1 HSPs)
scaffold1147 (8-96)||(528-617)
[»] scaffold0087 (1 HSPs)
scaffold0087 (8-96)||(8525-8613)
[»] scaffold0223 (1 HSPs)
scaffold0223 (8-100)||(24870-24963)
[»] scaffold0084 (1 HSPs)
scaffold0084 (8-96)||(4036-4121)
[»] scaffold0294 (1 HSPs)
scaffold0294 (64-96)||(13230-13262)


Alignment Details
Target: chr2 (Bit Score: 571; Significance: 0; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 571; E-Value: 0
Query Start/End: Original strand, 319 - 1026
Target Start/End: Original strand, 29203915 - 29204635
Alignment:
Q  319 aaatatgttgagtttcgtggttgtgaatgcaaggcatttcaaaatctgttagataaacacctttggggaaatatgaattcttctcctaagaaaattgctt 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29203915 aaatatgttgagtttcgtggttgtgaatgcaaggcatttcaaaatctgttagataaacacctttggggaaatatgaagtcttctcctaagaaaattgctt 29204014  T
Q  419 tcaagtcttgtggtaaattctatgttggtgctggaatatggattaagggttatagcaaggaccattggcttggaagt---ggagttaattacatgtgtga 515  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    |||||||||| |   ||| |    
T  29204015 tcaagtcttgtggtaaattctatgttggtgctggaatatggactaagggttatagcaaggaccattggcttggaagatcaggagttaatttccaatgtaa 29204114  T
Q  516 tatacttagagacagcttaattaacaaactctacttatcattttgtagtactaattaatttattccaagtatacaaatattcctgatctgagaatgattg 615  Q
    |||   ||||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  29204115 tattaatagagacagattagttaacaaagtctacttatcattttgtagtactgattaatttatttcaagtatacaaattttcctgatctgagaatgattg 29204214  T
Q  616 ttcgaagcatctacacctacaaaattgtcttatatcaccacctatggacttttctagtctacaaaattgacaactcttgtgttgcatccagttgttatat 715  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29204215 ttcgaagcatctacacctacaaaattgtcttatatcaccacctatggacttttctagtctacaaaattgacaactcttgtgttgcatctagttgttatat 29204314  T
Q  716 agagaaacatatgcttttgggtctatttctaacggcatcaatcttgtatccctcacacttcaaaactgtgaatttgattctgacttaaacataactagtc 815  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29204315 agagaaacatatgcttttgggtctatttctaacggcatcaatcttgtatccctcacacttcaaaactgtgaatttgattctgacttaaacataactagtc 29204414  T
Q  816 caacactctgtcatttgaac---gtagtagatcatcataggcgccgtctgcttcctccttggaaactcaagatagacatcttcgcattaaatctctcatc 912  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29204415 caacactctgtcatttgaacgtagtagtagatcatcataggcgccgtctgcttcctccttggaaactcaagatagacatcttcgcattaaatctctcatc 29204514  T
Q  913 ctttgagtatagtagtaaccctggtacatacatttatatttcgaagtatc-aggctcctaagttatcaaaag---tactgc-attgtatgtatact-atg 1006  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    ||||| |||||||||||||| |||    
T  29204515 ctttgagtatagtagtaaccctggtacatacatttatatttcgaagtatcaaggctcctaagttatcaaaaggttaactgcaattgtatgtatactaatg 29204614  T
Q  1007 ccg-ctgatgtgttttgtgga 1026  Q
    ||| |||||||||||||||||    
T  29204615 ccgcctgatgtgttttgtgga 29204635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 8 - 494
Target Start/End: Original strand, 29198931 - 29199418
Alignment:
Q  8 tttttaaaactcgcaaacaaggg-tttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagtcgcaaa 106  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29198931 tttttaaaactcgcaaacaaggggtttacactccataagcatttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagtcgcaaa 29199030  T
Q  107 caagggtttgccctcttaataaagcttttgcttttgaacaaaaagtaaaaccaacattttatgatttacaaaaaactttatctcagtgaaaaaatcatgt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29199031 caagggtttgccctcttaataaagcttttgcttttgaacaaaaagtaaaaccaacattttatgatttacaaaaaactttatctcagtgaaaaaatcatgt 29199130  T
Q  207 agtgcaatatgtattctcattgccgtccttcttttttcagattaaagatttacatttggtctccgatcatgagcacatgaaagaacctgaaagattttct 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29199131 agtgcaatatgtattctcattgccgtccttcttttttcagattaaagatttacatttggtctccgatcatgagcacatgaaagaacctgaaagattttct 29199230  T
Q  307 cataacgagttgaaatatgttgagtttcgtggttgtgaatgcaaggcatttcaaaatctgttagataaacacctttggggaaatatgaattcttctccta 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29199231 cataacgagttgaaatatgttgagtttcgtggttgtgaatgcaaggcatttcaaaatctgttagataaacacctttggggaaatatgaagtcttctccta 29199330  T
Q  407 agaaaattgctttcaagtcttgtggtaaattctatgttggtgctggaatatggattaagggttatagcaaggaccattggcttggaag 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29199331 agaaaattgctttcaagtcttgtggtaaattctatgttggtgctggaatatggactaagggttatagcaaggaccattggcttggaag 29199418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 124 - 580
Target Start/End: Complemental strand, 29194996 - 29194540
Alignment:
Q  124 aataaagcttttgcttttgaacaaaaagtaaaaccaacattttatgatttacaaaaaactttatctcagtgaaaaaatcatgtagtgcaatatgtattct 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29194996 aataaagcttttgcttttgaacaaaaagtaaaaccaacattttatgatttacaaaaaactttatctcagtgaaaaaatcatgtagtgcaatatgtattct 29194897  T
Q  224 cattgccgtccttcttttttcagattaaagatttacatttggtctccgatcatgagcacatgaaagaacctgaaagattttctcataacgagttgaaata 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29194896 cattgccgtccttcttttttcagattaaagatttacatttggtctccgatcatgagcacatgaaagaacctgaaagattttctcataacgagttgaaata 29194797  T
Q  324 tgttgagtttcgtggttgtgaatgcaaggcatttcaaaatctgttagataaacacctttggggaaatatgaattcttctcctaagaaaattgctttcaag 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29194796 tgttgagtttcgtggttgtgaatgcaaggcatttcaaaatctgttagataaacacctttggggaaatatgaagtcttctcctaagaaaattgctttcaag 29194697  T
Q  424 tcttgtggtaaattctatgttggtgctggaatatggattaagggttatagcaaggaccattggcttggaagtggagttaattacatgtgtgatatactta 523  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29194696 tcttgtggtaaattctatgttggtgctggaatatggattaagggttatagcaaggaccattggcttggaagtggagttaattacatgtgtgatatactta 29194597  T
Q  524 gagacagcttaattaacaaactctacttatcattttgtagtactaattaatttattc 580  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29194596 gagacagcttaattaacaaactctacttatcattttgtagtattaattaatttattc 29194540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 586 - 847
Target Start/End: Complemental strand, 29196270 - 29196009
Alignment:
Q  586 atacaaatattcctgatctgagaatgattgttcgaagcatctacacctacaaaattgtcttatatcaccacctatggacttttctagtctac-aaaattg 684  Q
    ||||| || ||||| ||| ||||||||||||| |||  |||||||||| ||||| |||||| ||||||||||||||||||||||||| |||  |||||||    
T  29196270 atacacattttccttatcagagaatgattgtttgaaatatctacacctgcaaaactgtcttctatcaccacctatggacttttctagactaagaaaattg 29196171  T
Q  685 acaactcttgtgttgcatccagttgttatatagagaaacatatgcttttgggtctattt-ctaacggcatcaatcttgtatccctcacacttcaaaactg 783  Q
    ||||||||||||||||||| ||||||||||  || |||||||||||||||||| ||||| |||||||| ||||||||| |  |||||||||| | |||||    
T  29196170 acaactcttgtgttgcatctagttgttata--gaaaaacatatgcttttgggtttattttctaacggcgtcaatcttgcagacctcacacttaacaactg 29196073  T
Q  784 tgaatttgattctgacttaaacataactagtccaacactctgtcatttgaacgtagtagatcat 847  Q
      |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||    
T  29196072 caaatttgattctgacttaaacataacttgtccaacactctgtcatttgaacatagtcgatcat 29196009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 30728259 - 30728349
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30728259 tttttaaaactcgcaaacaagggttaccactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 30728349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 37918011 - 37918100
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37918011 tttttaaaactcgcaagcaagggtttaccactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 37918100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 38975328 - 38975239
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctt 97  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  38975328 tttttaaaactcgcaaacaagggttaccactccataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaaacctt 38975239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 36554940 - 36554848
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||    
T  36554940 tttttaaaactcacaaacaagggtttaccactccataagcctttcctttcctttccctcccctccaaaattcaactcgcaaacaaagccttag 36554848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 2979784 - 2979696
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  2979784 tttttaaaactcgcaaacaagggttttgactccataagtctttccttccctttccctcccttccaaaacccaactcgcaaacaaagcct 2979696  T

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Target: chr2; HSP #10
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 45167023 - 45166931
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    ||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  45167023 tttttaaaactcgcaaataagggtttaccactccataagcctttcattcccttcctctcccctccaaaacccaactcgcaaacaaagctttag 45166931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 747104 - 747014
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  747104 tttttaaaacccgcaaacaaaggtttaccactccataagcctttccttcccttcccctcccctccaaaa--caactcgcaaacaaagctttag 747014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 20283446 - 20283354
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    |||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  20283446 tttttaaaactcacaaacaagggtttaccactcc-taagcctttccttcccttcccctccccttcaaaacccaactcacaaacaaagccttagt 20283354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 37861385 - 37861288
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagtcgca 104  Q
    |||| ||||||| |||||||||||||||  ||||||||| ||||||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||    
T  37861385 ttttaaaaactctcaaacaagggtttacctctccataagtctttccttcccctcccctcccctccaaatcccaactcgcaaacaaagccttaggcgca 37861288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 32037135 - 32037045
Alignment:
Q  8 tttttaaaactcgcaaacaagggttta-cactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||||||||||| |||||||||||||| ||||| | || ||||||||| || ||||||||||||||||| ||||||| ||||||||||||||    
T  32037135 tttttaaaactcacaaacaagggtttagcactc-acaaacctttcctttccctcccctcccctccaaaacccaactcccaaacaaagcctta 32037045  T

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Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 11913846 - 11913761
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaa 92  Q
    |||||||||||| |||| |||  |||||  |||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  11913846 tttttaaaactcccaaaaaagaatttacctctccataaacctttcattcccctcccctcccctccaaaatccaactcacaaacaaa 11913761  T

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Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 22338437 - 22338529
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttcctt-----cccttcccctcccctccaaaatccaactcgcaaacaaagcc 95  Q
    |||||||||| |||||| |||| ||  ||||||||||| ||||||||     ||||||| ||||||| |||||||||||||||||||||||||    
T  22338437 tttttaaaacccgcaaataaggtttaccactccataagtctttccttcccttcccttcctctccccttcaaaatccaactcgcaaacaaagcc 22338529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 45168785 - 45168843
Alignment:
Q  13 aaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctcc 71  Q
    ||||||||||||||||| ||  ||||||||||||||| |||||||||||| ||||||||    
T  45168785 aaaactcgcaaacaaggtttaccactccataagccttcccttcccttcccttcccctcc 45168843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 1857846 - 1857935
Alignment:
Q  8 tttttaaaactcgcaaacaagggttta-cactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||| ||| ||||| |||| |||||||||||||||||| ||   | |||||||||| |||| | |||||||||||||    
T  1857846 tttttaaaactcgcaaataagagtttaccacttcataagcctttccttcccctctttttccctccaaaacccaagttgcaaacaaagcct 1857935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 45168828 - 45168877
Alignment:
Q  46 cctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcc 95  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  45168828 ccttcccttcccctcccctcccctccaaaacccaactcgcaaacaaagcc 45168877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 1928761 - 1928669
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacact-ccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||| |||||||| ||||||  | |||||||||||||||| ||  |||||||||||| |||  |||| |||||||||||| ||||    
T  1928761 tttttaaaactcccaaacaagagtttacctttccataagcctttcctttcccacccctcccctccgaaactcaacccgcaaacaaagcattag 1928669  T

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Target: chr7 (Bit Score: 81; Significance: 1e-37; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 9195645 - 9195737
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  9195645 tttttaaaactcacaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaagccatagt 9195737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 48565992 - 48565902
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||    
T  48565992 tttttaaaactcacaaacaagggtttacactccataagccttttcttaccttcccctcccctccaaaatccaactcacaaataaagcctta 48565902  T

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Target: chr7; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 40667271 - 40667360
Alignment:
Q  11 ttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  40667271 ttaaaactcgcaaacaagggtttaccactccataagtctttccttctcttcccttcccctccaaaatccaactcgcaaacaaagccttag 40667360  T

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Target: chr7; HSP #4
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 20948404 - 20948313
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  20948404 tttttaaaactcgcaaacaaggatttaccactccataagcctttccttcccttcccttcccctccaaaactcaactcgcaaacaaagcctta 20948313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 2133826 - 2133916
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  2133826 tttttaaaacttgcaaacaagggttaccactccataagcctttccttcccttcccctccccttcaaaattcaactcccaaacaaagcctta 2133916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 27087987 - 27088073
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaag 93  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  27087987 tttttaaaactcgcaaacaagggtttaccactccataagcttttccttcccttctcctcccctccaaaacccaactcgcaaacaaag 27088073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 27190314 - 27190228
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaag 93  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  27190314 tttttaaaactcgcaaacaagggtttaccactccataagcttttccttcccttctcctcccctccaaaacccaactcgcaaacaaag 27190228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 26924974 - 26925063
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  26924974 tttttaaaactggcaaacaagggtttaccacttcataagcctttcattcccttcccctcccctccaaaatccaacttgcaaacaaagcct 26925063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 27749803 - 27749890
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     ||||| |||||||||||||||||||||||    
T  27749803 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttccccttc-----aaaattcaactcgcaaacaaagccttagt 27749890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 34381530 - 34381615
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaa 92  Q
    |||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  34381530 tttttaaaactcgcaaacaaagatttaccactccataaacctttccttcccttcccctctcctccaaaatccaactcgcaaacaaa 34381615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 44279310 - 44279218
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||| | |||| ||||| |||||||||||| ||||||||||    
T  44279310 tttttaaaactcgcaaacaagggtttaccactccataagcctttccttcccctccctttcccttcaaaacccaactcgcaaataaagccttag 44279218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 11564574 - 11564662
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||| ||||||||| |||||| |||||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||||    
T  11564574 tttttaaaacttgcaaacaagagtttaccactccata-gcctttccttccgttcccctcccttccaaaacccaactcgcaaacaaagcct 11564662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 38189726 - 38189639
Alignment:
Q  10 tttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||| ||||||||||||||||  |||||||||| |||||||  | ||||||||||||||||||||||| ||||||||||||||    
T  38189726 tttaaaacttgcaaacaagggtttacctctccataagcatttccttatcctcccctcccctccaaaatccaacacgcaaacaaagcct 38189639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 37567895 - 37567807
Alignment:
Q  8 tttttaaaactcgcaaacaagggttta-cactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| |||||||||||||| ||||| | || ||||||||| || ||||||||||||||||| ||||||| ||||||||||||    
T  37567895 tttttaaaactcacaaacaagggtttagcactc-acaaacctttcctttccctcccctcccctccaaaacccaactcccaaacaaagcct 37567807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 26642527 - 26642435
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||| ||||||||| |||||  |||||||| |||||| ||| ||||| |||| ||| ||||  |||||||||||||||| |||||    
T  26642527 tttttaaaactctcaaacaaggatttacctctccataaacctttctttctcttccactccactctaaaactcaactcgcaaacaaagtcttag 26642435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 33154044 - 33153958
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    ||||||||| || ||||||| ||||||| |||||||||||||||| ||||||     | |||||||||| ||||||| ||||||||||||||    
T  33154044 tttttaaaattcacaaacaatggtttaccactccataagcctttctttccct-----ttccctccaaaacccaactcacaaacaaagcctta 33153958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 35070709 - 35070667
Alignment:
Q  301 ttttctcataacgagttgaaatatgttgagtttcgtggttgtg 343  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  35070709 ttttctcataacgatttgaaatatgttgaatttcgtggttgtg 35070667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 32392436 - 32392473
Alignment:
Q  59 tcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  32392436 tcccctcccctccaaaatccaactcgcaaacaaggcct 32392473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 221816 - 221749
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaa 74  Q
    ||||||||||| |||||||||  ||||| |||||| ||||||||||||||| | |||| |||||||||    
T  221816 tttttaaaacttgcaaacaagaatttaccactccacaagcctttccttccccttcccttccctccaaa 221749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 35096745 - 35096703
Alignment:
Q  301 ttttctcataacgagttgaaatatgttgagtttcgtggttgtg 343  Q
    |||||||||||||| |||||||||||||| || ||||||||||    
T  35096745 ttttctcataacgatttgaaatatgttgaattccgtggttgtg 35096703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 6e-37; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 24077511 - 24077598
Alignment:
Q  12 taaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24077511 taaaactcgcaaacaagggttaccactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 24077598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 6618431 - 6618340
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  6618431 tttttaaaactcgcaaacaagggtttaccactccataaacctttccttccctttccctcccctccaaaatccaactcgcaaacaaaacctta 6618340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 23101789 - 23101884
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctcc-----aaaatccaactcgcaaacaaagcctta 98  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||    
T  23101789 tttttaaaactcgcaaacaaggtttaccactccataagcctttccttcccttcccctcccctcccctctaaaatccaactcgcaaacaaagcctta 23101884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 42379326 - 42379239
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagc 94  Q
    |||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42379326 tttttaaaactcacaaacaaggatttaccactccataaacctttccttcccttcccctcccctccaaaacccaactcgcaaacaaagc 42379239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 8807188 - 8807101
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||    
T  8807188 tttttaaaactcgcaaacaaggattttaactccataagcctttccttcccttccc-----ctccaaaatccaactcgcaaacaaagccttagt 8807101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 10378111 - 10378183
Alignment:
Q  25 caagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctt 97  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10378111 caagggttaccactccataagcctttccttcccttcccttcccctccaaaatccaactcgcaaacaaagcctt 10378183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 6920636 - 6920551
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaa 92  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  6920636 tttttaaaactcacaaacaaggatttaccactccataagcctttccttccattcctctccccttcaaaatccaactcgcaaacaaa 6920551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 37505217 - 37505309
Alignment:
Q  8 tttttaaaactcgcaaacaagggttta-cactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    |||||||||||| |||||||||||||| ||||| | ||||||||||||||| |||| |||||||||||| ||||||| ||||||||||||||||    
T  37505217 tttttaaaactcacaaacaagggtttagcactc-acaagcctttccttcccctcccttcccctccaaaacccaactcccaaacaaagccttagt 37505309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 29692071 - 29692125
Alignment:
Q  37 ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaa 91  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||    
T  29692071 ctccataagcctttccttcccttcccttcccttccaaaacccaactcgcaaacaa 29692125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 10378069 - 10378113
Alignment:
Q  36 actccataagcctttccttcccttcccctcccctccaaaatccaa 80  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  10378069 actccataagcctttccttcccttcccttcccctccaaaatccaa 10378113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 6e-37; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 29351027 - 29350936
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  29351027 tttttaaaactcacaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaagtcttag 29350936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 19509716 - 19509632
Alignment:
Q  12 taaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  19509716 taaaactcgcaaacaagggtttacactccataagcctttcctttccttcccctccccaccaaaatccaactcgcaaacaaagcct 19509632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 40630965 - 40630877
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40630965 tttttaaaacttacaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaagcct 40630877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 7882546 - 7882635
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7882546 tttttaaaactcacaaacaagagtttaccactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 7882635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 22460095 - 22460183
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22460095 tttttaaaactcgcaaacaagggttaccactccataagtctttccttcccttcccctcccctccaaaatccaactctcaaacaaagcct 22460183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 44234743 - 44234828
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaa 92  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44234743 tttttaaaactcgcaaacaaaggtttaccactccataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaa 44234828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 6807922 - 6807833
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||| ||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6807922 tttttaaaattcgcaaacaagagtttaccactccataagtctttccttcccttcccctcccctccaaaattcaactcgcaaacaaagcct 6807833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 56208352 - 56208439
Alignment:
Q  7 atttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagc 94  Q
    ||||||||||||||||||||||||||  |||||||||| |||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  56208352 atttttaaaactcgcaaacaagggttaccactccataaacctttcattcccttcccttccccttcaaaatccaactcgcaaacaaagc 56208439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 36968495 - 36968406
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||||||||||| ||||||| | || ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  36968495 tttttaaaactcgcaaacaatggtttaccattcaataagcctttccttcccttcccctcccctccaaaacccaactcccaaacaaagcct 36968406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 8087865 - 8087953
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||  ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  8087865 tttttaaaacttacaaacaagggttaccactccataagcctttcctttccttcccctcccctccaaaattcaactcccaaacaaagcct 8087953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 21357889 - 21357981
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||||    
T  21357889 tttttaaaactcccaaacaagggtttacctctccataagcctttccttcccctccgctcccctccaaaacccaactcgcaaacaaaaccttag 21357981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 7315429 - 7315519
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||||||||||| ||||||||||||||| ||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7315429 tttttaaaactcacaaacaagggtttaccactcc-taaacgtttccttcccttcccctcccctccaaaacccaactcgcaaacaaagcctta 7315519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 18103775 - 18103678
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagtcgca 104  Q
    |||| ||||||| |||||||||||||||  ||||||||| ||||||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||    
T  18103775 ttttaaaaactctcaaacaagggtttacctctccataagtctttccttcccctcccctcccctccaaatcccaactcgcaaacaaagccttaggcgca 18103678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 31989599 - 31989519
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaa 88  Q
    |||||||||||||||||||||||||  ||||||||||| ||||| |||||||||| |||||||||||||||||||| ||||    
T  31989599 tttttaaaactcgcaaacaagggttaccactccataagtctttcattcccttcccttcccctccaaaatccaactcacaaa 31989519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 30301603 - 30301695
Alignment:
Q  8 tttttaaaactcgcaaacaagggttta-cactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    |||||||||||| |||||||||||||| ||||| | |||||||||||| || ||||||||||||||||| ||||||| ||||||||| ||||||    
T  30301603 tttttaaaactcacaaacaagggtttagcactc-acaagcctttcctttccctcccctcccctccaaaacccaactcccaaacaaagtcttagt 30301695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 28510463 - 28510404
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcc 66  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  28510463 tttttaaaactcgcaaacaagggtttaccactccataagcctttccttcccctcccctcc 28510404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 12689674 - 12689758
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||||||||||||||||||| |||| |||| | |||||||||||||||     |||||||| ||||||||||||||||||||    
T  12689674 tttttaaaactcgcaaacaagggtttaccactcaataaacatttccttcccttccc-----ctccaaaacccaactcgcaaacaaagcct 12689758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 41548440 - 41548343
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctcca----aaatccaactcgcaaacaaagccttagt 100  Q
    |||||||||||| |||||||||||||||  ||||| |||||||||| |||| |||||||||||||     ||| ||||||||||||||||||||||||    
T  41548440 tttttaaaactcccaaacaagggtttacctctccacaagcctttccctcccctcccctcccctcccctccaaacccaactcgcaaacaaagccttagt 41548343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 3006312 - 3006413
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttcctt----------cccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||          ||||||| ||||||||||||||||||||| ||||||||||||    
T  3006312 tttttaaaattcacaaacaagggtttaccactccataagcctttcctttccttcctttcccttcctctcccctccaaaatccaactcacaaacaaagcct 3006411  T
Q  97 ta 98  Q
    ||    
T  3006412 ta 3006413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 22453160 - 22453254
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttccc-----ctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||| |||||||||||     || |||||||||| ||||||| ||||||||||||    
T  22453160 tttttaaaactcgcaaacaaggatttaccactccataaaccttttcttcccttccctttcccttccctccaaaacccaactcacaaacaaagcct 22453254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 9390305 - 9390241
Alignment:
Q  8 tttttaaaactcgcaaacaagggttta-cactccataagcctttccttcccttcccctcccctcc 71  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||||||    
T  9390305 tttttaaaactcgcaaacaagggtttaccactcaataaacctttacttcccttcccttcccctcc 9390241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 5835962 - 5835896
Alignment:
Q  37 ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagtcgc 103  Q
    |||||||| |||||| |||||  |||||||||||||||| ||||||||||| |||| ||| ||||||    
T  5835962 ctccataaacctttcattccccacccctcccctccaaaacccaactcgcaagcaaaacctcagtcgc 5835896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 18665637 - 18665686
Alignment:
Q  47 ctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||| |||  |||||||||||| ||||||||||||||||||||    
T  18665637 ctttccttcccctccattcccctccaaaacccaactcgcaaacaaagcct 18665686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 45286490 - 45286457
Alignment:
Q  64 tcccctccaaaatccaactcgcaaacaaagcctt 97  Q
    ||||||||||||||||||||||||||||||||||    
T  45286490 tcccctccaaaatccaactcgcaaacaaagcctt 45286457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 43141052 - 43141102
Alignment:
Q  46 cctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||| ||||||||||||| || |||||||| ||||||| ||||||||||||    
T  43141052 ccttcccttcccttccccaccactccaaaacccaactcacaaacaaagcct 43141102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 6e-37; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 31167662 - 31167753
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31167662 tttttaaaactcgcaaacaagggttaccactccataagcctttccttcccttcccctcccctccaaaatccaacttgcaaacaaagccttag 31167753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 13282392 - 13282480
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13282392 tttttaaaactcgcaaataagggtttacactccataagcctttcctttccttcccctcccctctaaaatccaactcgcaaacaaagcct 13282480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 4606722 - 4606811
Alignment:
Q  7 atttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4606722 atttttaaaacttgcaaacaagggttaccactccataagcctttccttcccttcccctcccctccaaaattcaactcgcaaacaaagcct 4606811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 52787787 - 52787876
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  52787787 tttttaaaactcacaaacaagggtttaccactccataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaagcct 52787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 52794006 - 52794095
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  52794006 tttttaaaactcacaaacaagggtttaccactccataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaagcct 52794095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 5331726 - 5331638
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  5331726 tttttaaaactcgcaaacaagggtttaccatccataagcctttccttcccttcccctcccctccaaaacctaactcgcaaacaaagcct 5331638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 39233153 - 39233242
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39233153 tttttaaaactctcaaacaagggtttacctctccataagcctttcctccccttcccctcccctccaaaatccaactcgcaaacaaagcct 39233242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 7047840 - 7047748
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  7047840 tttttaaaactcgcaaacaagggtttaccactccata-gcctttccttccctttccctcccctccaaaacccaactcgcaaacaaaaccttagt 7047748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 13276125 - 13276037
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  13276125 tttttaaaacttgcaaacaagggttaccactccataagcttttccttcccttcccctcccctccaaaattcaactcccaaacaaagcct 13276037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 41283908 - 41283819
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||| |||||||||||| | |||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  41283908 tttttaaaactcgcagacaagggtttaccattccataagtctttccttcccctcccctcccctccaaaacccaactcgcaaacaaagcct 41283819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 41720156 - 41720242
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaag 93  Q
    |||||||||||| |||||||| |||||| |||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  41720156 tttttaaaactcacaaacaagagtttaccactctataagcctttccttcccttaccctcccctccaaaacccaactcgaaaacaaag 41720242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 18096164 - 18096072
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    ||||| |||||||||||||| |||||||  |||||||| |||||||||||| ||||  ||||||||||| |||||||||||||||||||||||    
T  18096164 ttttttaaactcgcaaacaaaggtttacctctccataaacctttccttcccctccctccccctccaaaacccaactcgcaaacaaagccttag 18096072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 30760852 - 30760901
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttccc 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30760852 tttttaaaactcgcaaacaagggtttacactccataagcctttccttccc 30760901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 19007757 - 19007845
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcc 95  Q
    |||||||| ||| |||||||||||||||  ||||||||||||||||||||| | |||||  |||||||| |||||||||||||||||||    
T  19007757 tttttaaagctcccaaacaagggtttacctctccataagcctttccttcccctaccctcatctccaaaacccaactcgcaaacaaagcc 19007845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 8406119 - 8406029
Alignment:
Q  8 tttttaaaactcgcaaacaagggttta-cactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||||||||||| |||||||||||||| ||||| | |||||||||||| || |||| |||||||||||| ||||||| ||||||||||||||    
T  8406119 tttttaaaactcacaaacaagggtttagcactc-acaagcctttcctttccctcccttcccctccaaaacccaactcccaaacaaagcctta 8406029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 55346697 - 55346606
Alignment:
Q  8 tttttaaaactcgcaaacaagggttta-cactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    ||||||||||||||||||||| ||||| ||||| |||||| ||| |||||| |||| ||| | ||||||  ||||||||||||||||||||||    
T  55346697 tttttaaaactcgcaaacaagagtttaccactctataagcttttgcttcccctcccttcctc-ccaaaactcaactcgcaaacaaagccttag 55346606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 26413088 - 26412997
Alignment:
Q  8 tttttaaaactcgcaaacaagggttta-cactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||||||||||| |||||||| ||||| | |||||||| | |||||||||| || |||||| |||||||  |||||||||| ||||||||||    
T  26413088 tttttaaaactcacaaacaagagtttacctctccataatcatttccttcccctctcctcccatccaaaactcaactcgcaaccaaagcctta 26412997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 53251754 - 53251666
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttccc-----ctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||||||||||     ||||||||||||||||||||| ||||     |||| |||||||| ||||||| ||||||||||||    
T  53251754 tttttaaaactcgcaaacaagggt-----ctccataagcctttccttcccctcccctcctctcctctccaaaacccaactctcaaacaaagcct 53251666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 3e-35; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 25359720 - 25359628
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  25359720 tttttaaaactcacaaacaagggtttacacttcataagcctttcctttccttcccctcccctccaaaatccaactcgcaaacaaaaccttagt 25359628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 26631367 - 26631459
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  26631367 tttttaaaactcgcaaacaagggtttaccactccataagcctttccttccctccccctcccctccaaaacccaactcgcaaacaaagccttag 26631459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 26737342 - 26737434
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  26737342 tttttaaaactcgcaaacaagggtttaccactccataagcctttccttccctccccctcccctccaaaacccaactcgcaaacaaagccttag 26737434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 28329979 - 28329892
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcc 95  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28329979 tttttaaaactcgcaaacaagggttaccactccataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaagcc 28329892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 28507615 - 28507528
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcc 95  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28507615 tttttaaaactcgcaaacaagggttaccactccataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaagcc 28507528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 23306404 - 23306492
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23306404 tttttaaaacttgcaaacaagggttaccactccataagcctttccttcccttcccctcccctccaaaattcaactcgcaaacaaagcct 23306492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 16802270 - 16802187
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaa 92  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||    
T  16802270 tttttaaaactcacaaacaagggtttacactccataagccgttcctttcgtt-ccctcccctccaaaatccaactcgcaaacaaa 16802187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 29730596 - 29730513
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaa 91  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| ||| ||||||| |||||||    
T  29730596 tttttaaaactcgcaaacaagggtttacactccataaacatttccttcccctcccctcccctccgaaacccaactcacaaacaa 29730513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 4582167 - 4582067
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcc-------tttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||||||||||||| ||||| ||||||| ||||       |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4582167 tttttaaaactcgcaaacaaggatttaccactccatgagccatgagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagtcttag 4582068  T
Q  100 t 100  Q
    |    
T  4582067 t 4582067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 30800496 - 30800410
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaag 93  Q
    ||||||||||| ||||||||| |||||| ||| ||||||||||| ||| || ||||||||||||||||| |||||||||||||||||    
T  30800496 tttttaaaacttgcaaacaagagtttaccactgcataagccttttctttccctcccctcccctccaaaacccaactcgcaaacaaag 30800410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 14628993 - 14629067
Alignment:
Q  21 caaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    ||||||||  |||||||| |||||||||||||||     |||||||||||||||| ||||||||||||||||||| ||||    
T  14628993 caaacaagaatttacacttcataagcctttcctt-----cccctcccctccaaaacccaactcgcaaacaaagccatagt 14629067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 1e-34; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 7880105 - 7880188
Alignment:
Q  13 aaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7880105 aaaactcgcaaacaagggttaccactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 7880188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 28728991 - 28729082
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  28728991 tttttaaaactcgcaaacaagggtttacacttcataagcctttccttcccttaccctcccctccaaaacctaactcgcaaacaaagccttag 28729082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 27276031 - 27276117
Alignment:
Q  13 aaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27276031 aaaactcgcaaacaagggttaccactccataagcctttccttcccttcccctcccctccaaaatccaactcacaaacaaagccttag 27276117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 14752610 - 14752526
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaa 92  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14752610 tttttaaaactcacgaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaa 14752526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 9196139 - 9196051
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  9196139 tttttaaaactcgcaaacaagggttttgactccataagcatttccttccattcccctcccctccaaaacccaactcgcaaacaaagcct 9196051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 48187655 - 48187567
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  48187655 tttttaaaactcgcaaataagggtttacacttcataagcctttccttcccctcccctcccctccaaaacacaactcgcaaacaaagcct 48187567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 20360641 - 20360551
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||| ||||||||||||||||||||  ||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  20360641 ttttaaaaactcgcaaacaagggttaccactcaataagcctttccttccgttcccctcccctacaaaatccaactcgcaaacaaagcctta 20360551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 20550329 - 20550419
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||| ||||||||||||||||||||  ||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  20550329 ttttaaaaactcgcaaacaagggttaccactcaataagcctttccttccgttcccctcccctacaaaatccaactcgcaaacaaagcctta 20550419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 45310973 - 45310883
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||||||||||||||||||||  ||  ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||    
T  45310973 tttttaaaactcgcaaacaagatttaccactccataagcctttcattccattcccatcccctccaaaatccaactcgcaaacaaagcctta 45310883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 44773615 - 44773526
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| |||||||||||||||  |||||||||| |||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  44773615 tttttaaaactcccaaacaagggtttacctctccataagcatttccttcccctcccctcccttccaaaacccaactcgcaaacaaagcct 44773526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 44700126 - 44700214
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| |||||||| ||||||  ||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  44700126 tttttaaaactcccaaacaagagtttacctctccataagcctttccttcccttcccctcccctccaaaacccaact-gtaaacaaagcct 44700214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 49535969 - 49536051
Alignment:
Q  11 ttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaag 93  Q
    ||||||||||||||||||  ||  ||||||||| ||||||||||||| |||  | |||||||||||||||||| |||||||||    
T  49535969 ttaaaactcgcaaacaagatttaccactccatatgcctttccttcccctccattgccctccaaaatccaactcacaaacaaag 49536051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 23832913 - 23833010
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccat-----aagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    ||||| |||||| ||||||| |||||||| ||||||     ||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  23832913 tttttgaaactcccaaacaaaggtttacatctccatttttaaagtctttccttcccatcccctcccctccaaaacccaactcgcaaacaaaaccttag 23833010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 17171459 - 17171545
Alignment:
Q  8 tttttaaaactcgcaaacaagggttta-cactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    ||||||||||||| ||||||| ||||| |||||||||||| ||||||||||     || ||||||||||  |||||||||||||||||||||    
T  17171459 tttttaaaactcgaaaacaagtgtttaacactccataagcatttccttccc-----cttccctccaaaactcaactcgcaaacaaagcctta 17171545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 33334680 - 33334599
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctta 98  Q
    |||||| |||||||||||||| |||||| |||||||||| |||||||||||          |||||||| ||||||||||||||||||||||    
T  33334680 tttttataactcgcaaacaagagtttactactccataagtctttccttccc----------ctccaaaacccaactcgcaaacaaagcctta 33334599  T

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Target: chr8 (Bit Score: 75; Significance: 5e-34; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 34322789 - 34322703
Alignment:
Q  9 ttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcc 95  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  34322789 ttttaaaactcacaaacaagggtttacactccataagcctttccttctcttcccctcccctccaaaacccaactcgcaaacaaagcc 34322703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 37807019 - 37807112
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    |||||||||||| ||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37807019 tttttaaaactcacaaacaaaggtttaccactctataagcctttccttcccttcccctcccctccaaaacccaactcgcaaacaaagccttagt 37807112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 43204323 - 43204234
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  43204323 tttttaaaactcgcaaacaaggatttaccactccataagcctttcctttccttcccctcccctccaaaacccaactcgcaaacaaagcct 43204234  T

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Target: chr8; HSP #4
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 32776935 - 32777022
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagc 94  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  32776935 tttttaaaactcgcaaagaagggtttaccactccataagcctttccttcccctcccctcccctccaaaacccaactcgcaaacaaagc 32777022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 26849256 - 26849167
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  26849256 tttttaaaactcggaaacaagggtttaccactccataagcctttccttcccctcccttcccctccaaaacccaactcgcaaacaaagcct 26849167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 21257857 - 21257772
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaa 92  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||||    
T  21257857 tttttaaaactcgcaaacaagggtttaccactccataagccttttcttcccctcccttcccctccaaaacccaactcgcaaacaaa 21257772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 30592127 - 30592216
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| |||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  30592127 tttttaaaactcccaaacaagggttaacctctccataagcctttccttcccctcccctcccctccaaaaaccaactcgcaaacaaagcct 30592216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 20162698 - 20162790
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||| | |||| ||||| |||||||||||| ||||||||||    
T  20162698 tttttaaaactcgcaaacaagggtttaccactccataagcctttccttcccctccctttcccttcaaaacccaactcgcaaataaagccttag 20162790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 20194798 - 20194706
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||| | |||| ||||| |||||||||||| ||||||||||    
T  20194798 tttttaaaactcgcaaacaagggtttaccactccataagcctttccttcccctccctttcccttcaaaacccaactcgcaaataaagccttag 20194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 4860193 - 4860284
Alignment:
Q  8 tttttaaaactcgcaa-acaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcctt 97  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| |||| ||||||||    
T  4860193 tttttaaaactcgcaacacaagggtttaccactccataagcctttccttcccttctcctcccctccaaaacccaactcacaaataaagcctt 4860284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 39679540 - 39679452
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||||||||||| ||| |||| ||||| ||||||||||||||||||||    
T  39679540 tttttaaaactcgcaaacaagagtttaccactccataagccattccttcccttctcct-cccttcaaaacccaactcgcaaacaaagcct 39679452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 39154273 - 39154184
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttaca-ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| ||||||| |||||||  |||||||||| ||| |||||| |||||||| |||||||| ||||||| ||||||||||||    
T  39154273 tttttaaaactcccaaacaatggtttacctctccataagcattttcttcccctcccctcctctccaaaacccaactcccaaacaaagcct 39154184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 42576232 - 42576139
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttccct-tcccctcccctccaaaatccaactcgcaaacaaagccttag 99  Q
    ||||||| ||||||||| |||||||||| | ||||||| |||||| |||||  |||||  |||||||||| |||||||||||||||||||||||    
T  42576232 tttttaagactcgcaaaaaagggtttaccattccataaacctttcattccccctccccctccctccaaaacccaactcgcaaacaaagccttag 42576139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 31220058 - 31220002
Alignment:
Q  37 ctccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaag 93  Q
    ||||||||||||||| ||||| |  ||| ||||||||||||||| ||||||||||||    
T  31220058 ctccataagcctttctttcccatttccttccctccaaaatccaattcgcaaacaaag 31220002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 40672702 - 40672638
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctcc 71  Q
    |||||||||||| |||||||| |||| | |||||| ||||||||||||||| | |||||||||||    
T  40672702 tttttaaaactctcaaacaagagttttccactccacaagcctttccttccccttccctcccctcc 40672638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 1878 - 1789
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  1878 tttttaaaactcacaaacaagggtttacgactccataagcctttccttcccttcccctcccctccaaaacccaactcacaaacaaagcct 1789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 11013 - 10925
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||    
T  11013 tttttaaaactcgcaaacaagggttaccactccataagccattccttccattcccctaccctccaaaatccaactcgcaaacaaagcct 10925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 67; Significance: 3e-29; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 47032 - 47118
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacactccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagc 94  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  47032 tttttaaaactcgcaaacaagggttttgactccataagcctttccttccctttccctcccctcaaaaacccaactcgcaaacaaagc 47118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 73646 - 73725
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgca 86  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| |||||| | ||| ||||||||||    
T  73646 ttttttaaactcgcaaacaagggtttaccactccataagcctttccttcccctcccttccccttcgaaacccaactcgca 73725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1147 (Bit Score: 58; Significance: 7e-24; HSPs: 1)
Name: scaffold1147
Description:

Target: scaffold1147; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 528 - 617
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||  |||||||||||    
T  528 tttttaaaactcgcaaacaagagtttaccactccataagcctttccttcccctcccttcctctccaaaatccaactcataaacaaagcct 617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 8613 - 8525
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||| ||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  8613 ttttgaaaactcacaaacaagggtttaccactcc-taagcctttccttcccttcccctcccctccaaaacccgactcacaaacaaagcct 8525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 24870 - 24963
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttac-actccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagccttagt 100  Q
    ||||| ||||||||||| |||| ||||| |||||||||| ||||||||| | |||| |||||||||||| | ||||||||||||||| ||||||    
T  24870 ttttttaaactcgcaaataaggatttaccactccataagtctttccttctcctcccttcccctccaaaaccgaactcgcaaacaaaggcttagt 24963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 4121 - 4036
Alignment:
Q  8 tttttaaaactcgcaaacaagggtttacact-ccataagcctttccttcccttcccctcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||| ||||||| |||||||  | ||||||||||||| ||||| |||||    |||||||| ||||||||||||||||||||    
T  4121 tttttaaaactcccaaacaaaggtttacctttccataagcctttctttcccctcccc----ctccaaaacccaactcgcaaacaaagcct 4036  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 13262 - 13230
Alignment:
Q  64 tcccctccaaaatccaactcgcaaacaaagcct 96  Q
    |||||||||||||||||||||||||||||||||    
T  13262 tcccctccaaaatccaactcgcaaacaaagcct 13230  T

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